MD10G1211700.v1.1

Metal tolerance protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
31077184 .. 31080068
2885 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1211700.v1.1.491

Sequence Viewer

Length: 1266 bp
ATGGAGATTAGTTCGCCCACTTCCGGAGGCCGCACTGAACCACTTCTGGTGTCACAAGACGACGCCGTACAGCCGGCCGGAAATACATCGTGGAGACTCGATGTTAAGGAGTTCCGGCTGCCCCAGCAGAACGGTACTAGTGGTGACGACCATGACAGTGGAAGGAGTCGTTTCGCATTCCGTCGCCTCTGCGCCCCCAGTAAGGATTCTGCTCATGAATTTTTCTTGCTTTGGCTTTTAAACTCAGGGAAAAAGTACAAGGTTGAAGAATATTACAAGAAACAGGAAAGGCTTCTTGAAGGGTTCAGTGAGATGGAGACCATGACTGAAGAGGGTTGGTTGCCCGGAAGTCTTACGGAGGATCAAATGAAGCAGCTAGCGAAGAGCGAGCGGATGGCAGTTCATGCATCAAACGTAGCTAATTTGGTTCTTTTTGCTGCAAAAGTTTATGCTTCAATTATGAGCAGATCATTGGCAGTTATTGCTTCTACCTTGGATTCCCTCTTGGATCTCTTATCCGGCTTTATTTTGTGGTTCACTGCTAATGCCATGAAAAATCCCAACCAGTTTCGCTATCCTATTGGGAAGAAACGTATGCAACCAGTGGGTATCATTGTCTTCGCATCTGTTATGGCTACTCTTGGACTGCAAATATTGATCGAGTCTGGTCGAGAACTCGTCTCTCAGTCACCACCCGAAAAAATGAATAGTACGCAGGAGAATTGGATGATCGGCATCATGGTCTCAGTCACTGTAGTGAAGTTTGTGCTCATGGTCTACTGTCGTAGATTTAAGAATGCAATTGTACGGGCCTATGCACAAGACCATTTTTTCGATGTCATTACTAATTCAGTTGGTTTAGCAGCAGCAGTCCTAGCTGTCCGGTTCTTCTGGTGGATTGATCCTACTGGTGCTATTATAATAGCACTATATACCATTAACACATGGGCAAAGACAGTCTTGGAGAATGTACATGCGCTAATTGGAAGAACAGCACCACCCGACTTTTTGGCAAAGTTGACATACTTGATATGGAACCACCATGAAGAGATCAAGCACATCGACACAGTGAGGGCGTACACATTTGGTTCCCATTACTTTGTGGAGGTTGACATTGTCTTGCCAGAAGACATGCTACTGAACAAAGCGCACAACATTGGCGAGACTCTCCAAGAGAAGCTCGAGCAACTCCCTGAAGTGGAACGGGCTTTTGTGCATATAGATTTTGAGTTCACTCACAGGCCGGAACACAAGAACAGTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

422

Amino Acids

47.78

Weight (kDa)

6.25

Isoelectric Point (pI)

49.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_efflux PF01545 135 - 327 2.9e-32 Cation efflux transmembrane domain
ZT_dimer PF16916 342 - 408 1e-08 Cation efflux protein, cytoplasmic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 920
AccBSI CCGCTC 1 cut(s) 391
AccI GTMKAC 1 cut(s) 777
AccIII TCCGGA 1 cut(s) 23
AciI CCGC 2 cut(s) 31, 391
AclWI GGATC 3 cut(s) 369, 516, 896
AcoI YGGCCR 1 cut(s) 75
AcsI RAATTY 1 cut(s) 218
AcuI CTGAAG 2 cut(s) 348, 1215
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 7 cut(s) 69, 136, 257, 712, 807, 972, 1079
AfiI CCNNNNNNNGG 3 cut(s) 23, 202, 1198
AgsI TTSAA 3 cut(s) 266, 299, 456
AhlI ACTAGT 1 cut(s) 137
AleI CACNNNNGTG 1 cut(s) 755
AluBI AGCT 4 cut(s) 376, 419, 878, 1180
AluI AGCT 4 cut(s) 376, 419, 878, 1180
Alw21I GWGCWC 1 cut(s) 771
Alw26I GTCTC 5 cut(s) 88, 311, 685, 748, 1157
AlwI GGATC 3 cut(s) 369, 516, 896
AlwNI CAGNNNCTG 1 cut(s) 752
Ama87I CYCGRG 1 cut(s) 1181
Aor13HI TCCGGA 1 cut(s) 23
AoxI GGCC 4 cut(s) 28, 75, 810, 1241
ApeKI GCWGC 5 cut(s) 118, 373, 437, 863, 866
ApoI RAATTY 1 cut(s) 218
ArsI GACNNNNNNTTYG 2 cut(s) 815, 847
Asp700I GAANNNNTTC 2 cut(s) 42, 291
AspLEI GCGC 3 cut(s) 194, 979, 1150
AspS9I GGNCC 1 cut(s) 810
AsuC2I CCSGG 1 cut(s) 345
AsuHPI GGTGA 2 cut(s) 155, 681
AsuNHI GCTAGC 1 cut(s) 376
AvaI CYCGRG 1 cut(s) 1181
BarI GAAGNNNNNNTAC 2 cut(s) 1119, 1151
BbsI GAAGAC 2 cut(s) 610, 1134
Bbv12I GWGCWC 1 cut(s) 771
BbvI GCAGC 5 cut(s) 105, 385, 424, 875, 878
BccI CCATC 2 cut(s) 307, 388
BceAI ACGGC 1 cut(s) 50
BcnI CCSGG 1 cut(s) 345
BcoDI GTCTC 5 cut(s) 88, 311, 685, 748, 1157
BcuI ACTAGT 1 cut(s) 137
BfaI CTAG 3 cut(s) 138, 377, 875
BfmI CTRYAG 1 cut(s) 753
BisI GCNGC 6 cut(s) 31, 119, 374, 438, 864, 867
BlsI GCNGC 6 cut(s) 32, 120, 375, 439, 865, 868
Bme1390I CCNGG 1 cut(s) 345
BmeT110I CYCGRG 1 cut(s) 1181
BmgT120I GGNCC 1 cut(s) 810
BmiI GGNNCC 2 cut(s) 1037, 1090
BmrFI CCNGG 1 cut(s) 345
BmrI ACTGGG 1 cut(s) 192
BmsI GCATC 3 cut(s) 416, 632, 744
BmtI GCTAGC 1 cut(s) 380
BmuI ACTGGG 1 cut(s) 192
BpiI GAAGAC 2 cut(s) 610, 1134
BpuMI CCSGG 1 cut(s) 345
BsaBI GATNNNNATC 1 cut(s) 734
BsaHI GRCGYC 1 cut(s) 63
BsaI GGTCTC 2 cut(s) 311, 748
BsaJI CCNNGG 1 cut(s) 492
BsaWI WCCGGW 2 cut(s) 23, 882
Bsc4I CCNNNNNNNGG 3 cut(s) 23, 202, 1198
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 4 cut(s) 198, 565, 602, 913
Bse8I GATNNNNATC 1 cut(s) 734
BseAI TCCGGA 1 cut(s) 23
BseDI CCNNGG 1 cut(s) 492
BseGI GGATG 2 cut(s) 399, 732
BseJI GATNNNNATC 1 cut(s) 734
BseLI CCNNNNNNNGG 3 cut(s) 23, 202, 1198
BseMII CTCAG 3 cut(s) 258, 698, 759
BseNI ACTGG 4 cut(s) 198, 565, 602, 913
BseX3I CGGCCG 1 cut(s) 75
BseXI GCAGC 5 cut(s) 105, 385, 424, 875, 878
BseYI CCCAGC 1 cut(s) 123
Bsh1285I CGRYCG 1 cut(s) 78
BshFI GGCC 4 cut(s) 30, 77, 812, 1243
BsiEI CGRYCG 1 cut(s) 78
BsiHKAI GWGCWC 1 cut(s) 771
BsiHKCI CYCGRG 1 cut(s) 1181
BsiSI CCGG 8 cut(s) 24, 74, 78, 115, 345, 519, 883, 1244
BslI CCNNNNNNNGG 3 cut(s) 23, 202, 1198
BsmAI GTCTC 5 cut(s) 88, 311, 685, 748, 1157
BsmBI CGTCTC 1 cut(s) 685
BsmI GAATGC 2 cut(s) 176, 802
BsnI GGCC 4 cut(s) 30, 77, 812, 1243
Bso31I GGTCTC 2 cut(s) 311, 748
BsoBI CYCGRG 1 cut(s) 1181
Bsp1286I GDGCHC 1 cut(s) 771
Bsp13I TCCGGA 1 cut(s) 23
Bsp1407I TGTACA 1 cut(s) 970
Bsp143I GATC 7 cut(s) 361, 467, 508, 657, 729, 901, 1050
BspACI CCGC 2 cut(s) 31, 391
BspANI GGCC 4 cut(s) 30, 77, 812, 1243
BspCNI CTCAG 3 cut(s) 257, 697, 758
BspEI TCCGGA 1 cut(s) 23
BspHI TCATGA 1 cut(s) 214
BspLI GGNNCC 2 cut(s) 1037, 1090
BspOI GCTAGC 1 cut(s) 380
BspPI GGATC 3 cut(s) 369, 516, 896
BspQI GCTCTTC 1 cut(s) 377
BspTNI GGTCTC 2 cut(s) 311, 748
BsrBI CCGCTC 1 cut(s) 391
BsrFI RCCGGY 1 cut(s) 73
BsrGI TGTACA 1 cut(s) 970
BsrI ACTGG 4 cut(s) 198, 565, 602, 913
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 1 cut(s) 492
BssMI GATC 7 cut(s) 361, 467, 508, 657, 729, 901, 1050
BssNI GRCGYC 1 cut(s) 63
BssT1I CCWWGG 1 cut(s) 492
Bst4CI ACNGT 7 cut(s) 134, 158, 754, 782, 958, 1069, 1259
Bst6I CTCTTC 3 cut(s) 324, 377, 1041
BstACI GRCGYC 1 cut(s) 63
BstAPI GCANNNNNTGC 2 cut(s) 404, 482
BstAUI TGTACA 1 cut(s) 970
BstC8I GCNNGC 3 cut(s) 75, 378, 389
BstDEI CTNAG 3 cut(s) 244, 684, 745
BstF5I GGATG 2 cut(s) 399, 732
BstHHI GCGC 3 cut(s) 194, 979, 1150
BstKTI GATC 7 cut(s) 364, 470, 511, 660, 732, 904, 1053
BstMAI GTCTC 5 cut(s) 88, 311, 685, 748, 1157
BstMBI GATC 7 cut(s) 361, 467, 508, 657, 729, 901, 1050
BstMCI CGRYCG 1 cut(s) 78
BstMWI GCNNNNNNNGC 4 cut(s) 124, 404, 482, 875
BstNSI RCATGY 2 cut(s) 977, 1135
BstSCI CCNGG 1 cut(s) 343
BstSFI CTRYAG 1 cut(s) 753
BstV1I GCAGC 5 cut(s) 105, 385, 424, 875, 878
BstV2I GAAGAC 2 cut(s) 610, 1134
BstX2I RGATCY 1 cut(s) 508
BstXI CCANNNNNNTGG 1 cut(s) 158
BstYI RGATCY 1 cut(s) 508
BstZI CGGCCG 1 cut(s) 75
BsuRI GGCC 4 cut(s) 30, 77, 812, 1243
BtsCI GGATG 2 cut(s) 399, 732
BtsI GCAGTG 1 cut(s) 537
BtsIMutI CAGTG 8 cut(s) 33, 163, 313, 537, 609, 750, 1074, 1264
Cac8I GCNNGC 3 cut(s) 75, 378, 389
CaiI CAGNNNCTG 1 cut(s) 752
CciI TCATGA 1 cut(s) 214
CfoI GCGC 3 cut(s) 194, 979, 1150
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 810
CseI GACGC 1 cut(s) 71
Csp6I GTAC 7 cut(s) 68, 135, 256, 711, 806, 971, 1078
CviQI GTAC 7 cut(s) 68, 135, 256, 711, 806, 971, 1078
DdeI CTNAG 3 cut(s) 244, 684, 745
DpnI GATC 7 cut(s) 363, 469, 510, 659, 731, 903, 1052
DpnII GATC 7 cut(s) 361, 467, 508, 657, 729, 901, 1050
DraI TTTAAA 1 cut(s) 240
EaeI YGGCCR 1 cut(s) 75
EagI CGGCCG 1 cut(s) 75
Eam1104I CTCTTC 3 cut(s) 324, 377, 1041
EarI CTCTTC 3 cut(s) 324, 377, 1041
EclXI CGGCCG 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 492
Eco31I GGTCTC 2 cut(s) 311, 748
Eco52I CGGCCG 1 cut(s) 75
Eco57I CTGAAG 2 cut(s) 348, 1215
Eco88I CYCGRG 1 cut(s) 1181
EcoT14I CCWWGG 1 cut(s) 492
EcoT22I ATGCAT 1 cut(s) 409
ErhI CCWWGG 1 cut(s) 492
Esp3I CGTCTC 1 cut(s) 685
FalI AAGNNNNNCTT 2 cut(s) 944, 976
FblI GTMKAC 1 cut(s) 777
Fnu4HI GCNGC 6 cut(s) 31, 119, 374, 438, 864, 867
FokI GGATG 2 cut(s) 406, 739
Fsp4HI GCNGC 6 cut(s) 31, 119, 374, 438, 864, 867
FspBI CTAG 3 cut(s) 138, 377, 875
GlaI GCGC 3 cut(s) 193, 978, 1149
GluI GCNGC 6 cut(s) 31, 119, 374, 438, 864, 867
GsaI CCCAGC 1 cut(s) 127
HaeIII GGCC 4 cut(s) 30, 77, 812, 1243
HapII CCGG 8 cut(s) 24, 74, 78, 115, 345, 519, 883, 1244
HgaI GACGC 1 cut(s) 71
HhaI GCGC 3 cut(s) 194, 979, 1150
Hin1I GRCGYC 1 cut(s) 63
Hin6I GCGC 3 cut(s) 192, 977, 1148
HinP1I GCGC 3 cut(s) 192, 977, 1148
HincII GTYRAC 2 cut(s) 1020, 1111
HindII GTYRAC 2 cut(s) 1020, 1111
HinfI GANTC 6 cut(s) 96, 166, 206, 497, 662, 1165
HpaII CCGG 8 cut(s) 24, 74, 78, 115, 345, 519, 883, 1244
HphI GGTGA 2 cut(s) 155, 681
Hpy166II GTNNAC 6 cut(s) 537, 778, 1020, 1080, 1111, 1233
Hpy188III TCNNGA 4 cut(s) 24, 215, 296, 671
Hpy8I GTNNAC 6 cut(s) 537, 778, 1020, 1080, 1111, 1233
Hpy99I CGWCG 2 cut(s) 65, 186
HpyAV CCTTC 2 cut(s) 156, 293
HpyCH4III ACNGT 7 cut(s) 134, 158, 754, 782, 958, 1069, 1259
HpyCH4IV ACGT 2 cut(s) 414, 592
HpyCH4V TGCA 7 cut(s) 407, 440, 598, 649, 800, 818, 1216
HpyF10VI GCNNNNNNNGC 4 cut(s) 124, 404, 482, 875
HpyF3I CTNAG 3 cut(s) 244, 684, 745
HpySE526I ACGT 2 cut(s) 414, 592
Hsp92I GRCGYC 1 cut(s) 63
HspAI GCGC 3 cut(s) 192, 977, 1148
Kpn2I TCCGGA 1 cut(s) 23
KroI GCCGGC 1 cut(s) 73
KroNI GCCGGC 1 cut(s) 75
Kzo9I GATC 7 cut(s) 361, 467, 508, 657, 729, 901, 1050
LguI GCTCTTC 1 cut(s) 377
Lsp1109I GCAGC 5 cut(s) 105, 385, 424, 875, 878
LweI GCATC 3 cut(s) 416, 632, 744
MaeI CTAG 3 cut(s) 138, 377, 875
MaeII ACGT 2 cut(s) 414, 592
MaeIII GTNAC 4 cut(s) 51, 143, 687, 748
MalI GATC 7 cut(s) 363, 469, 510, 659, 731, 903, 1052
MbiI CCGCTC 1 cut(s) 391
MboI GATC 7 cut(s) 361, 467, 508, 657, 729, 901, 1050
MboII GAAGA 9 cut(s) 278, 341, 394, 598, 610, 880, 999, 1058, 1139
MfeI CAATTG 1 cut(s) 801
MflI RGATCY 1 cut(s) 508
MhlI GDGCHC 1 cut(s) 771
MluCI AATT 7 cut(s) 218, 421, 456, 721, 801, 847, 981
MlyI GAGTC 4 cut(s) 90, 175, 671, 1159
MnlI CCTC 7 cut(s) 20, 197, 325, 352, 512, 1065, 1099
Mph1103I ATGCAT 1 cut(s) 409
MroI TCCGGA 1 cut(s) 23
MroNI GCCGGC 1 cut(s) 73
MroXI GAANNNNTTC 2 cut(s) 42, 291
MseI TTAA 4 cut(s) 105, 239, 792, 939
MslI CAYNNNNRTG 2 cut(s) 156, 755
MspI CCGG 8 cut(s) 24, 74, 78, 115, 345, 519, 883, 1244
MspR9I CCNGG 1 cut(s) 345
MunI CAATTG 1 cut(s) 801
Mva1269I GAATGC 2 cut(s) 176, 802
MwoI GCNNNNNNNGC 4 cut(s) 124, 404, 482, 875
NaeI GCCGGC 1 cut(s) 75
NciI CCSGG 1 cut(s) 345
NdeII GATC 7 cut(s) 361, 467, 508, 657, 729, 901, 1050
NgoMIV GCCGGC 1 cut(s) 73
NheI GCTAGC 1 cut(s) 376
NlaIV GGNNCC 2 cut(s) 1037, 1090
NmuCI GTSAC 4 cut(s) 51, 143, 687, 748
NsiI ATGCAT 1 cut(s) 409
NspI RCATGY 2 cut(s) 977, 1135
OliI CACNNNNGTG 1 cut(s) 755
PaeR7I CTCGAG 1 cut(s) 1181
PagI TCATGA 1 cut(s) 214
PciSI GCTCTTC 1 cut(s) 377
PctI GAATGC 2 cut(s) 176, 802
PdiI GCCGGC 1 cut(s) 75
PdmI GAANNNNTTC 2 cut(s) 42, 291
PfeI GAWTC 2 cut(s) 206, 497
PflFI GACNNNGTC 1 cut(s) 1115
PkrI GCNGC 6 cut(s) 32, 120, 375, 439, 865, 868
PleI GAGTC 4 cut(s) 90, 174, 670, 1159
PpsI GAGTC 4 cut(s) 90, 174, 670, 1159
PsiI TTATAA 1 cut(s) 920
PspFI CCCAGC 1 cut(s) 123
PspN4I GGNNCC 2 cut(s) 1037, 1090
PspPI GGNCC 1 cut(s) 810
PspXI VCTCGAGB 1 cut(s) 1181
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 1 cut(s) 508
PsyI GACNNNGTC 1 cut(s) 1115
RsaI GTAC 7 cut(s) 69, 136, 257, 712, 807, 972, 1079
RsaNI GTAC 7 cut(s) 68, 135, 256, 711, 806, 971, 1078
RseI CAYNNNNRTG 2 cut(s) 156, 755
SapI GCTCTTC 1 cut(s) 377
SaqAI TTAA 4 cut(s) 105, 239, 792, 939
SatI GCNGC 6 cut(s) 31, 119, 374, 438, 864, 867
Sau3AI GATC 7 cut(s) 361, 467, 508, 657, 729, 901, 1050
Sau96I GGNCC 1 cut(s) 810
SchI GAGTC 4 cut(s) 90, 175, 671, 1159
ScrFI CCNGG 1 cut(s) 345
SduI GDGCHC 1 cut(s) 771
SetI ASST 9 cut(s) 264, 378, 417, 421, 494, 595, 880, 1110, 1182
SfaNI GCATC 3 cut(s) 416, 632, 744
SfcI CTRYAG 1 cut(s) 753
Sfr274I CTCGAG 1 cut(s) 1181
SlaI CTCGAG 1 cut(s) 1181
SmiMI CAYNNNNRTG 2 cut(s) 156, 755
SmlI CTYRAG 1 cut(s) 1181
SmoI CTYRAG 1 cut(s) 1181
SpeI ACTAGT 1 cut(s) 137
Sse9I AATT 7 cut(s) 218, 421, 456, 721, 801, 847, 981
SsiI CCGC 2 cut(s) 31, 391
SspI AATATT 2 cut(s) 272, 654
SspMI CTAG 3 cut(s) 138, 377, 875
StyD4I CCNGG 1 cut(s) 343
StyI CCWWGG 1 cut(s) 492
TaaI ACNGT 7 cut(s) 134, 158, 754, 782, 958, 1069, 1259
TaiI ACGT 2 cut(s) 417, 595
TaqI TCGA 6 cut(s) 99, 660, 670, 834, 1062, 1182
TasI AATT 7 cut(s) 218, 421, 456, 721, 801, 847, 981
TatI WGTACW 2 cut(s) 255, 970
TauI GCSGC 1 cut(s) 33
TfiI GAWTC 2 cut(s) 206, 497
Tru1I TTAA 4 cut(s) 105, 239, 792, 939
Tru9I TTAA 4 cut(s) 105, 239, 792, 939
TscAI CASTG 8 cut(s) 40, 163, 313, 544, 609, 757, 1074, 1264
TseFI GTSAC 4 cut(s) 51, 143, 687, 748
TseI GCWGC 5 cut(s) 118, 373, 437, 863, 866
Tsp45I GTSAC 4 cut(s) 51, 143, 687, 748
TspDTI ATGAA 6 cut(s) 231, 383, 392, 566, 719, 1059
TspGWI ACGGA 2 cut(s) 170, 371
TspRI CASTG 8 cut(s) 40, 163, 313, 544, 609, 757, 1074, 1264
Tth111I GACNNNGTC 1 cut(s) 1115
XapI RAATTY 1 cut(s) 218
XceI RCATGY 2 cut(s) 977, 1135
XhoI CTCGAG 1 cut(s) 1181
XmiI GTMKAC 1 cut(s) 777
XmnI GAANNNNTTC 2 cut(s) 42, 291
XspI CTAG 3 cut(s) 138, 377, 875
Zsp2I ATGCAT 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.