MD11G1147500.v1.1

Protein of unknown function (DUF1635)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0011938
Physical Location & Seq
Forward (+)
13915145 .. 13917245
2101 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1147500.v1.1.491

Sequence Viewer

Length: 780 bp
ATGAACAACCACCACAGCAGCAGCCCTCTTCTTAGCAGTTGGGCTTACTACTGCCAAGGAAAGAGCATGGAAGAGTTGAGGCAGTCCCTTTTGTACACAACCGTGGAGCTTGAGCAAACAAGAGCAGCAGTTCAAGAGGAGCTAAGAAAAAGAGATGATCAGATATCCCATCTCAAAGATCTGCTCCAAAAAGCCATCAGAGAAAGAGATGAAGCCCAAGGCAAGTGCCAAAGACTCCTCCTTGAAAAACTCCTCCAACAAACCCAGCAGCAGCAACACCAGCAAACCCAGCAGAATCAGCAAACAGCTCCTCTCTCTGGAATTTCAAGCATTGAAGACGAACCCAGAAGAGGAATCGACTCTAACAATGGCTTCTCCTCCTCAGATTGTGAAGAAAGCATTGTTTCTTCCCCAGTTATTGACCCAATTCAGCAAACCCAGCAGCTGCCACCACGACCATCTTTGCCACACCCATCAGTGGAGCTGCTGCCTGAAAAGGGAAAGCTTTTGCAGGCTGTGATGAAAGCCGGTCCATTGCTTCAAACCCTACTTCTGGCAGGCCCTCTGCCGCAGTGGAGACACCCGCCGCCGCCGCTGGAGTCGTTTGAGATCCCCCCTGTGACCATTCCTTCACCACCACCTCAACCACCATTGCACACCCAGCTCCAGCACCAAGACTCCTCCAACGTTAACTGCGGCATAGTAAACAGAAAGAGAGTCCTCTGTGATGGCTCTGCCTCTCCTCCAGAGACCAAGTTCCAAAGGGTTGCCCTCCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1635

Protein Analysis

260

Amino Acids

29.09

Weight (kDa)

6.45

Isoelectric Point (pI)

68.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1635 PF07795 21 - 256 3.5e-90 Protein of unknown function (DUF1635)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011938)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G28140 AT3G44940 AT5G22930
fragaria_vesca FvH4_3g30750 FvH4_3g30750
malus_domestica MD03G1126900.v1.1 MD11G1147500.v1.1
prunus_persica Prupe.6G112200_v2.0.a1
pyrus_communis pycom11g12080
rosa_chinensis RchiOBHm_Chr5g0056941
rosa_laevigata RLG00000035141
rosa_multiflora Rmu_sc0002035.1_g000007
rosa_roxburghii Rroxscaffold_1G00023250
rosa_rugosa Rorug05G0304500
rosa_samantha Rh5AG373900 Rh5BG384900 Rh5CG408200 Rh5DG398300
rosa_wichuraiana Rw5G035190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 7 cut(s) 569, 584, 587, 590, 593, 696, 775
AclI AACGTT 1 cut(s) 687
AclWI GGATC 1 cut(s) 604
AcsI RAATTY 1 cut(s) 321
AfaI GTAC 1 cut(s) 95
AfiI CCNNNNNNNGG 5 cut(s) 317, 350, 478, 497, 553
AgsI TTSAA 5 cut(s) 134, 245, 327, 335, 542
AleI CACNNNNGTG 1 cut(s) 101
AluBI AGCT 7 cut(s) 109, 142, 308, 445, 484, 505, 664
AluI AGCT 7 cut(s) 109, 142, 308, 445, 484, 505, 664
Alw26I GTCTC 2 cut(s) 571, 743
AlwI GGATC 1 cut(s) 604
AlwNI CAGNNNCTG 1 cut(s) 445
AoxI GGCC 1 cut(s) 559
ApeKI GCWGC 9 cut(s) 18, 21, 125, 268, 271, 442, 445, 484, 487
ApoI RAATTY 1 cut(s) 321
AspS9I GGNCC 2 cut(s) 530, 560
AsuHPI GGTGA 1 cut(s) 624
AvaII GGWCC 1 cut(s) 530
BbsI GAAGAC 1 cut(s) 342
BbvI GCAGC 9 cut(s) 30, 33, 137, 280, 283, 432, 454, 471, 474
BccI CCATC 5 cut(s) 177, 203, 466, 481, 722
BclI TGATCA 1 cut(s) 157
BcoDI GTCTC 2 cut(s) 571, 743
BglII AGATCT 1 cut(s) 178
Bme18I GGWCC 1 cut(s) 530
BmgT120I GGNCC 2 cut(s) 530, 560
BmrI ACTGGG 1 cut(s) 407
BmuI ACTGGG 1 cut(s) 407
BpiI GAAGAC 1 cut(s) 342
BpmI CTGGAG 3 cut(s) 617, 650, 729
BpuEI CTTGAG 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 743
BsaJI CCNNGG 3 cut(s) 55, 102, 217
BsaXI ACNNNNNCTCC 2 cut(s) 662, 692
Bsc4I CCNNNNNNNGG 5 cut(s) 317, 350, 478, 497, 553
Bse118I RCCGGY 1 cut(s) 527
Bse1I ACTGG 1 cut(s) 413
Bse3DI GCAATG 2 cut(s) 533, 650
BseDI CCNNGG 3 cut(s) 55, 102, 217
BseLI CCNNNNNNNGG 5 cut(s) 317, 350, 478, 497, 553
BseMI GCAATG 2 cut(s) 533, 650
BseMII CTCAG 1 cut(s) 396
BseNI ACTGG 1 cut(s) 413
BseRI GAGGAG 8 cut(s) 152, 227, 242, 300, 367, 370, 670, 732
BseXI GCAGC 9 cut(s) 30, 33, 137, 280, 283, 432, 454, 471, 474
BseYI CCCAGC 4 cut(s) 264, 288, 438, 660
BshFI GGCC 1 cut(s) 561
BsiSI CCGG 1 cut(s) 528
BslFI GGGAC 1 cut(s) 70
BslI CCNNNNNNNGG 5 cut(s) 317, 350, 478, 497, 553
BsmAI GTCTC 2 cut(s) 571, 743
BsmFI GGGAC 1 cut(s) 70
BsnI GGCC 1 cut(s) 561
Bso31I GGTCTC 1 cut(s) 743
Bsp1407I TGTACA 1 cut(s) 93
Bsp143I GATC 3 cut(s) 157, 178, 609
BspACI CCGC 7 cut(s) 569, 584, 587, 590, 593, 696, 775
BspANI GGCC 1 cut(s) 561
BspCNI CTCAG 1 cut(s) 395
BspPI GGATC 1 cut(s) 604
BspTNI GGTCTC 1 cut(s) 743
BsrDI GCAATG 2 cut(s) 533, 650
BsrFI RCCGGY 1 cut(s) 527
BsrGI TGTACA 1 cut(s) 93
BsrI ACTGG 1 cut(s) 413
BssAI RCCGGY 1 cut(s) 527
BssECI CCNNGG 3 cut(s) 55, 102, 217
BssMI GATC 3 cut(s) 157, 178, 609
BssT1I CCWWGG 2 cut(s) 55, 217
Bst4CI ACNGT 1 cut(s) 103
Bst6I CTCTTC 3 cut(s) 33, 66, 343
BstAUI TGTACA 1 cut(s) 93
BstC8I GCNNGC 2 cut(s) 513, 559
BstDEI CTNAG 3 cut(s) 32, 143, 382
BstDSI CCRYGG 1 cut(s) 102
BstKTI GATC 3 cut(s) 160, 181, 612
BstMAI GTCTC 2 cut(s) 571, 743
BstMBI GATC 3 cut(s) 157, 178, 609
BstMWI GCNNNNNNNGC 6 cut(s) 280, 289, 298, 439, 592, 661
BstV1I GCAGC 9 cut(s) 30, 33, 137, 280, 283, 432, 454, 471, 474
BstV2I GAAGAC 1 cut(s) 342
BstX2I RGATCY 2 cut(s) 178, 609
BstYI RGATCY 2 cut(s) 178, 609
BsuRI GGCC 1 cut(s) 561
BtgI CCRYGG 1 cut(s) 102
BtsI GCAGTG 1 cut(s) 578
BtsIMutI CAGTG 2 cut(s) 483, 578
Cac8I GCNNGC 2 cut(s) 513, 559
CaiI CAGNNNCTG 1 cut(s) 445
Cfr10I RCCGGY 1 cut(s) 527
Cfr13I GGNCC 2 cut(s) 530, 560
Csp6I GTAC 1 cut(s) 94
CviAII CATG 1 cut(s) 67
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 3 cut(s) 32, 143, 382
DpnI GATC 3 cut(s) 159, 180, 611
DpnII GATC 3 cut(s) 157, 178, 609
Eam1104I CTCTTC 3 cut(s) 33, 66, 343
EarI CTCTTC 3 cut(s) 33, 66, 343
Eco130I CCWWGG 2 cut(s) 55, 217
Eco31I GGTCTC 1 cut(s) 743
Eco32I GATATC 1 cut(s) 165
Eco47I GGWCC 1 cut(s) 530
EcoO109I RGGNCCY 1 cut(s) 560
EcoRV GATATC 1 cut(s) 165
EcoT14I CCWWGG 2 cut(s) 55, 217
ErhI CCWWGG 2 cut(s) 55, 217
FaeI CATG 1 cut(s) 70
FaiI YATR 2 cut(s) 68, 701
FaqI GGGAC 1 cut(s) 70
FatI CATG 1 cut(s) 66
FauI CCCGC 1 cut(s) 591
FbaI TGATCA 1 cut(s) 157
GsaI CCCAGC 4 cut(s) 268, 292, 442, 664
GsuI CTGGAG 3 cut(s) 617, 650, 729
HaeIII GGCC 1 cut(s) 561
HapII CCGG 1 cut(s) 528
Hin1II CATG 1 cut(s) 70
HincII GTYRAC 1 cut(s) 691
HindII GTYRAC 1 cut(s) 691
HindIII AAGCTT 1 cut(s) 503
HinfI GANTC 7 cut(s) 234, 295, 354, 359, 599, 677, 717
HpaI GTTAAC 1 cut(s) 691
HpaII CCGG 1 cut(s) 528
HphI GGTGA 1 cut(s) 624
Hpy166II GTNNAC 3 cut(s) 96, 691, 706
Hpy188I TCNGA 3 cut(s) 162, 200, 385
Hpy188III TCNNGA 3 cut(s) 134, 318, 746
Hpy8I GTNNAC 3 cut(s) 96, 691, 706
HpyAV CCTTC 1 cut(s) 639
HpyCH4III ACNGT 1 cut(s) 103
HpyCH4IV ACGT 1 cut(s) 687
HpyCH4V TGCA 2 cut(s) 511, 655
HpyF10VI GCNNNNNNNGC 6 cut(s) 280, 289, 298, 439, 592, 661
HpyF3I CTNAG 3 cut(s) 32, 143, 382
HpySE526I ACGT 1 cut(s) 687
Hsp92II CATG 1 cut(s) 70
Ksp22I TGATCA 1 cut(s) 157
KspAI GTTAAC 1 cut(s) 691
Kzo9I GATC 3 cut(s) 157, 178, 609
LmnI GCTCC 6 cut(s) 106, 139, 189, 313, 481, 669
Lsp1109I GCAGC 9 cut(s) 30, 33, 137, 280, 283, 432, 454, 471, 474
MaeII ACGT 1 cut(s) 687
MaeIII GTNAC 1 cut(s) 619
MalI GATC 3 cut(s) 159, 180, 611
MboI GATC 3 cut(s) 157, 178, 609
MboII GAAGA 6 cut(s) 20, 83, 347, 360, 399, 404
MflI RGATCY 2 cut(s) 178, 609
MluCI AATT 2 cut(s) 321, 426
MlyI GAGTC 5 cut(s) 228, 353, 608, 671, 726
MmeI TCCRAC 2 cut(s) 280, 708
MseI TTAA 1 cut(s) 690
MslI CAYNNNNRTG 1 cut(s) 101
MspA1I CMGCKG 3 cut(s) 445, 595, 777
MspI CCGG 1 cut(s) 528
MwoI GCNNNNNNNGC 6 cut(s) 280, 289, 298, 439, 592, 661
NdeII GATC 3 cut(s) 157, 178, 609
NlaIII CATG 1 cut(s) 70
NmuCI GTSAC 1 cut(s) 619
OliI CACNNNNGTG 1 cut(s) 101
PfeI GAWTC 2 cut(s) 295, 354
PleI GAGTC 5 cut(s) 228, 353, 607, 671, 725
PpsI GAGTC 5 cut(s) 228, 353, 607, 671, 725
Psp1406I AACGTT 1 cut(s) 687
PspFI CCCAGC 4 cut(s) 264, 288, 438, 660
PspPI GGNCC 2 cut(s) 530, 560
PstNI CAGNNNCTG 1 cut(s) 445
PsuI RGATCY 2 cut(s) 178, 609
PvuII CAGCTG 1 cut(s) 445
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
RseI CAYNNNNRTG 1 cut(s) 101
SaqAI TTAA 1 cut(s) 690
Sau3AI GATC 3 cut(s) 157, 178, 609
Sau96I GGNCC 2 cut(s) 530, 560
SchI GAGTC 5 cut(s) 228, 353, 608, 671, 726
SetI ASST 9 cut(s) 111, 144, 310, 447, 486, 507, 643, 666, 690
SinI GGWCC 1 cut(s) 530
SmiMI CAYNNNNRTG 1 cut(s) 101
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
Sse9I AATT 2 cut(s) 321, 426
SsiI CCGC 7 cut(s) 569, 584, 587, 590, 593, 696, 775
StyI CCWWGG 2 cut(s) 55, 217
TaaI ACNGT 1 cut(s) 103
TaiI ACGT 1 cut(s) 690
TaqI TCGA 1 cut(s) 357
TasI AATT 2 cut(s) 321, 426
TatI WGTACW 1 cut(s) 93
TauI GCSGC 5 cut(s) 571, 589, 592, 595, 699
TfiI GAWTC 2 cut(s) 295, 354
Tru1I TTAA 1 cut(s) 690
Tru9I TTAA 1 cut(s) 690
TscAI CASTG 2 cut(s) 483, 578
TseFI GTSAC 1 cut(s) 619
TseI GCWGC 9 cut(s) 18, 21, 125, 268, 271, 442, 445, 484, 487
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 3 cut(s) 17, 225, 536
TspRI CASTG 2 cut(s) 483, 578
VpaK11BI GGWCC 1 cut(s) 530
XapI RAATTY 1 cut(s) 321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.