Prupe.6G112200_v2.0.a1

Protein of unknown function (DUF1635)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
8074349 .. 8076498
2150 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G112200.1

Sequence Viewer

Length: 819 bp
ATGGACAACCAGCGCAGCGGCCCTCTTCTTAGCAGCTGGCAATACTACTGCCAAGGAAAGAGCATGGAAGAGTTGAGGCATACCCTTTTGTACACAACTGTGGAGCTGGAACAAACAAGGGTTGCAGTACAGGAGGAGCTAAGAAAGAGAGATGATCAATTGTCTCATCTCAAAGATCTGCTTAACAAAGCTATCAGAGAAAGAGATGAAGCACAAGACAAATGCCAAAGACTTCTCCTTGAGAAGCTCCTTCTCCAGCAGCAGCAGCAGCAGCAACAACTCCAACTCCAACTCCAACAACAGCAGCAGCAGCAAACAGCTCCTCTGTCTGGAATTTCAAGCATTGAAGATGAACCCAGAAGGGGAATTGACTCCAACAATGGCTTTTCTTCCTCAGATTGTGAAGAAAGCATTGTCTCCTCTCCAGTTCTTGACCCAATTCAACCAACCCAGTTGCCAGCAGGACCATCTGTGCCACACCAAACAGTGGAGCTAGTGCCTGAGAAGCCATTGCCTGAAAAAGGCAAGCTTTTGCAGGCAGTCATGAAAGCTGGTCCACTGCTTTCAACCCTTCTCCTGGCTGGACCACTGCCTCAATGGAGACACCCACCACCACCACTTGAGTCCTTTGAAATTCCCCCTGTGACCATTCCTTCACCACAACCTCCATTGCCCACACAGATCATCCACCAAGACTCCTCCTTGATTAACATTAATGGCTGCAACACCAACTGTGGCATAGTCAACAGGAAAAGAGCCCCCTGTGACGGCTCTGACTCTCCTTCAGAGACCAAGTTCCAAAGGGTTGCTCTTCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

273

Amino Acids

30.48

Weight (kDa)

5.57

Isoelectric Point (pI)

69.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011938)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 487
AciI CCGC 1 cut(s) 18
AcsI RAATTY 2 cut(s) 333, 633
AcuI CTGAAG 1 cut(s) 768
AfaI GTAC 2 cut(s) 92, 129
AfiI CCNNNNNNNGG 6 cut(s) 329, 362, 487, 521, 577, 767
AgsI TTSAA 5 cut(s) 339, 347, 443, 567, 632
AjnI CCWGG 1 cut(s) 576
AleI CACNNNNGTG 1 cut(s) 98
AluBI AGCT 9 cut(s) 36, 106, 139, 191, 247, 320, 493, 529, 551
AluI AGCT 9 cut(s) 36, 106, 139, 191, 247, 320, 493, 529, 551
Alw26I GTCTC 4 cut(s) 168, 421, 595, 782
AoxI GGCC 1 cut(s) 19
ApoI RAATTY 2 cut(s) 333, 633
AseI ATTAAT 1 cut(s) 714
AspLEI GCGC 1 cut(s) 15
AspS9I GGNCC 4 cut(s) 20, 464, 554, 584
AsuHPI GGTGA 1 cut(s) 648
AvaII GGWCC 3 cut(s) 464, 554, 584
BanII GRGCYC 1 cut(s) 760
BccI CCATC 1 cut(s) 475
BceAI ACGGC 1 cut(s) 784
BciT130I CCWGG 1 cut(s) 578
BclI TGATCA 1 cut(s) 154
BcoDI GTCTC 4 cut(s) 168, 421, 595, 782
BfaI CTAG 1 cut(s) 494
BglII AGATCT 1 cut(s) 175
Bme1390I CCNGG 1 cut(s) 578
Bme18I GGWCC 3 cut(s) 464, 554, 584
BmgT120I GGNCC 4 cut(s) 20, 464, 554, 584
BmrFI CCNGG 1 cut(s) 578
BmrI ACTGGG 1 cut(s) 445
BmuI ACTGGG 1 cut(s) 445
BpmI CTGGAG 2 cut(s) 239, 408
BpuEI CTTGAG 2 cut(s) 260, 641
BsaI GGTCTC 1 cut(s) 782
BsaJI CCNNGG 1 cut(s) 52
BsaXI ACNNNNNCTCC 6 cut(s) 270, 276, 300, 306, 680, 710
Bsc4I CCNNNNNNNGG 6 cut(s) 329, 362, 487, 521, 577, 767
Bse1I ACTGG 2 cut(s) 425, 451
Bse3DI GCAATG 2 cut(s) 509, 668
BseBI CCWGG 1 cut(s) 578
BseDI CCNNGG 1 cut(s) 52
BseGI GGATG 1 cut(s) 684
BseLI CCNNNNNNNGG 6 cut(s) 329, 362, 487, 521, 577, 767
BseMI GCAATG 2 cut(s) 509, 668
BseMII CTCAG 2 cut(s) 408, 492
BseNI ACTGG 2 cut(s) 425, 451
BseRI GAGGAG 4 cut(s) 149, 312, 409, 688
BshFI GGCC 1 cut(s) 21
BslI CCNNNNNNNGG 6 cut(s) 329, 362, 487, 521, 577, 767
BsmAI GTCTC 4 cut(s) 168, 421, 595, 782
BsnI GGCC 1 cut(s) 21
Bso31I GGTCTC 1 cut(s) 782
Bsp1286I GDGCHC 1 cut(s) 760
Bsp1407I TGTACA 1 cut(s) 90
Bsp143I GATC 3 cut(s) 154, 175, 681
BspACI CCGC 1 cut(s) 18
BspANI GGCC 1 cut(s) 21
BspCNI CTCAG 2 cut(s) 407, 493
BspHI TCATGA 1 cut(s) 543
BspQI GCTCTTC 1 cut(s) 816
BspTNI GGTCTC 1 cut(s) 782
BsrDI GCAATG 2 cut(s) 509, 668
BsrGI TGTACA 1 cut(s) 90
BsrI ACTGG 2 cut(s) 425, 451
BssECI CCNNGG 1 cut(s) 52
BssMI GATC 3 cut(s) 154, 175, 681
BssT1I CCWWGG 1 cut(s) 52
Bst2UI CCWGG 1 cut(s) 578
Bst4CI ACNGT 3 cut(s) 100, 487, 734
Bst6I CTCTTC 3 cut(s) 30, 63, 816
BstAUI TGTACA 1 cut(s) 90
BstC8I GCNNGC 4 cut(s) 38, 459, 527, 537
BstDEI CTNAG 4 cut(s) 29, 140, 394, 501
BstENI CCTNNNNNAGG 1 cut(s) 519
BstF5I GGATG 1 cut(s) 684
BstHHI GCGC 1 cut(s) 15
BstKTI GATC 3 cut(s) 157, 178, 684
BstMAI GTCTC 4 cut(s) 168, 421, 595, 782
BstMBI GATC 3 cut(s) 154, 175, 681
BstMWI GCNNNNNNNGC 5 cut(s) 265, 268, 271, 310, 505
BstNI CCWGG 1 cut(s) 578
BstSCI CCNGG 1 cut(s) 576
BstX2I RGATCY 1 cut(s) 175
BstYI RGATCY 1 cut(s) 175
BsuRI GGCC 1 cut(s) 21
BtsCI GGATG 1 cut(s) 684
BtsI GCAGTG 2 cut(s) 557, 587
BtsIMutI CAGTG 4 cut(s) 492, 557, 587, 814
Cac8I GCNNGC 4 cut(s) 38, 459, 527, 537
CciI TCATGA 1 cut(s) 543
CfoI GCGC 1 cut(s) 15
Cfr13I GGNCC 4 cut(s) 20, 464, 554, 584
Csp6I GTAC 2 cut(s) 91, 128
CviAII CATG 2 cut(s) 64, 544
CviQI GTAC 2 cut(s) 91, 128
DdeI CTNAG 4 cut(s) 29, 140, 394, 501
DpnI GATC 3 cut(s) 156, 177, 683
DpnII GATC 3 cut(s) 154, 175, 681
Eam1104I CTCTTC 3 cut(s) 30, 63, 816
EarI CTCTTC 3 cut(s) 30, 63, 816
Eco130I CCWWGG 1 cut(s) 52
Eco24I GRGCYC 1 cut(s) 760
Eco31I GGTCTC 1 cut(s) 782
Eco47I GGWCC 3 cut(s) 464, 554, 584
Eco57I CTGAAG 1 cut(s) 768
EcoNI CCTNNNNNAGG 1 cut(s) 519
EcoRII CCWGG 1 cut(s) 576
EcoT14I CCWWGG 1 cut(s) 52
EcoT38I GRGCYC 1 cut(s) 760
ErhI CCWWGG 1 cut(s) 52
FaeI CATG 2 cut(s) 67, 547
FaiI YATR 4 cut(s) 65, 81, 545, 740
FalI AAGNNNNNCTT 4 cut(s) 165, 197, 513, 545
FatI CATG 2 cut(s) 63, 543
FbaI TGATCA 1 cut(s) 154
FokI GGATG 1 cut(s) 671
FriOI GRGCYC 1 cut(s) 760
FspBI CTAG 1 cut(s) 494
GlaI GCGC 1 cut(s) 14
GsuI CTGGAG 2 cut(s) 239, 408
HaeIII GGCC 1 cut(s) 21
HhaI GCGC 1 cut(s) 15
Hin1II CATG 2 cut(s) 67, 547
Hin6I GCGC 1 cut(s) 13
HinP1I GCGC 1 cut(s) 13
HincII GTYRAC 1 cut(s) 745
HindII GTYRAC 1 cut(s) 745
HindIII AAGCTT 1 cut(s) 527
HinfI GANTC 4 cut(s) 371, 623, 695, 776
HphI GGTGA 1 cut(s) 648
Hpy166II GTNNAC 3 cut(s) 93, 557, 745
Hpy188I TCNGA 4 cut(s) 197, 397, 775, 787
Hpy188III TCNNGA 3 cut(s) 330, 431, 544
Hpy8I GTNNAC 3 cut(s) 93, 557, 745
HpyAV CCTTC 5 cut(s) 260, 354, 581, 663, 792
HpyCH4III ACNGT 3 cut(s) 100, 487, 734
HpyCH4V TGCA 3 cut(s) 125, 535, 723
HpyF10VI GCNNNNNNNGC 5 cut(s) 265, 268, 271, 310, 505
HpyF3I CTNAG 4 cut(s) 29, 140, 394, 501
Hsp92II CATG 2 cut(s) 67, 547
HspAI GCGC 1 cut(s) 13
Ksp22I TGATCA 1 cut(s) 154
Kzo9I GATC 3 cut(s) 154, 175, 681
LguI GCTCTTC 1 cut(s) 816
LmnI GCTCC 5 cut(s) 103, 136, 252, 325, 490
MaeI CTAG 1 cut(s) 494
MaeIII GTNAC 2 cut(s) 643, 764
MalI GATC 3 cut(s) 156, 177, 683
MboI GATC 3 cut(s) 154, 175, 681
MboII GAAGA 6 cut(s) 17, 80, 359, 381, 416, 803
MfeI CAATTG 1 cut(s) 158
MflI RGATCY 1 cut(s) 175
MhlI GDGCHC 1 cut(s) 760
MluCI AATT 5 cut(s) 158, 333, 366, 438, 633
MlyI GAGTC 4 cut(s) 365, 632, 689, 770
MmeI TCCRAC 4 cut(s) 307, 313, 319, 399
MnlI CCTC 9 cut(s) 33, 69, 127, 333, 403, 430, 603, 675, 709
MseI TTAA 3 cut(s) 183, 708, 714
MslI CAYNNNNRTG 1 cut(s) 98
MspA1I CMGCKG 2 cut(s) 18, 36
MspR9I CCNGG 1 cut(s) 578
MunI CAATTG 1 cut(s) 158
MvaI CCWGG 1 cut(s) 578
MwoI GCNNNNNNNGC 5 cut(s) 265, 268, 271, 310, 505
NdeII GATC 3 cut(s) 154, 175, 681
NlaIII CATG 2 cut(s) 67, 547
NmuCI GTSAC 2 cut(s) 643, 764
OliI CACNNNNGTG 1 cut(s) 98
PagI TCATGA 1 cut(s) 543
PciSI GCTCTTC 1 cut(s) 816
PflMI CCANNNNNTGG 1 cut(s) 487
PleI GAGTC 4 cut(s) 365, 631, 689, 770
PpsI GAGTC 4 cut(s) 365, 631, 689, 770
PshBI ATTAAT 1 cut(s) 714
Psp6I CCWGG 1 cut(s) 576
PspGI CCWGG 1 cut(s) 576
PspPI GGNCC 4 cut(s) 20, 464, 554, 584
PsuI RGATCY 1 cut(s) 175
PvuII CAGCTG 1 cut(s) 36
RsaI GTAC 2 cut(s) 92, 129
RsaNI GTAC 2 cut(s) 91, 128
RseI CAYNNNNRTG 1 cut(s) 98
SapI GCTCTTC 1 cut(s) 816
SaqAI TTAA 3 cut(s) 183, 708, 714
Sau3AI GATC 3 cut(s) 154, 175, 681
Sau96I GGNCC 4 cut(s) 20, 464, 554, 584
SchI GAGTC 4 cut(s) 365, 632, 689, 770
ScrFI CCNGG 1 cut(s) 578
SduI GDGCHC 1 cut(s) 760
SinI GGWCC 3 cut(s) 464, 554, 584
SmiMI CAYNNNNRTG 1 cut(s) 98
SmlI CTYRAG 2 cut(s) 239, 620
SmoI CTYRAG 2 cut(s) 239, 620
Sse9I AATT 5 cut(s) 158, 333, 366, 438, 633
SsiI CCGC 1 cut(s) 18
SspMI CTAG 1 cut(s) 494
StyD4I CCNGG 1 cut(s) 576
StyI CCWWGG 1 cut(s) 52
TaaI ACNGT 3 cut(s) 100, 487, 734
TasI AATT 5 cut(s) 158, 333, 366, 438, 633
TatI WGTACW 2 cut(s) 90, 127
TauI GCSGC 1 cut(s) 21
Tru1I TTAA 3 cut(s) 183, 708, 714
Tru9I TTAA 3 cut(s) 183, 708, 714
TscAI CASTG 3 cut(s) 492, 564, 594
TseFI GTSAC 2 cut(s) 643, 764
Tsp45I GTSAC 2 cut(s) 643, 764
TspDTI ATGAA 3 cut(s) 222, 366, 560
TspRI CASTG 3 cut(s) 492, 564, 594
Van91I CCANNNNNTGG 1 cut(s) 487
VpaK11BI GGWCC 3 cut(s) 464, 554, 584
VspI ATTAAT 1 cut(s) 714
XagI CCTNNNNNAGG 1 cut(s) 519
XapI RAATTY 2 cut(s) 333, 633
XcmI CCANNNNNNNNNTGG 1 cut(s) 594
XspI CTAG 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.