MD11G1180600.v1.1

Belongs to the GDA1 CD39 NTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0014823
Physical Location & Seq
Forward (+)
22097366 .. 22104460
7095 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1180600.v1.1.491

Sequence Viewer

Length: 1587 bp
ATGTGGCTGCCGATGGATTTGTCAACCCTCCAAATCCAAATCAAATCACAATCCCAATCAAAGAGACCGCCGCCCAGTGGGTTTGGCACTGGCAGCGCCTCCGTCCGCAGCAATCGCCTTCCCTCCAAATGCCTCATCCCCTCCCTCTCACTCCTCGCCCTCCCTTTCGTCTTCTACCTCCTCTCCACCGCCCACAAACTCCACCTCTCCCCCAAATTCGCCCACTCCCACTCCACCCTCTTCGGCATCGTCATCTCCGCCCGCCCCTCCTCCATCCGCATCCGCGTCTTCCACTTCCTCGACGGCACCGCCCCCTCCAGCTCCTCCTCCTCCCGCCTCCCCCTCTCCGCCTTCGCCTCCCACCCCGACCGCGCCGGCCCCTCCCTCGCCCCCTTGCTCCGCTTCGCCACCCTCCAGGTGCCCAAGAAAGAGCGCCCCAACACCAAGCTCCTCTTCTTTTCTGGCTCTGAGCTCGACGGCCTCGGCTCTGACGTCTCCGAGAAGCTTCTCGAGTCGTGCCGGAAGGCGCTCAGGTCGTCCGGGTTTTGGTTCAAGGACGAGTGGGCCCGATTCATTCCAGGTGAGGAACAAGGTGTTTATGCCTGGGTGAGTGCCAATTATGCCCTTGGAACTTTGACGAGTGAGCCTCAGGAAACCACTGGGGTTGTTGAACTTGGTGGGACTTCTTTGCAGGTTACGTTTGCTGCAAAACAATCACGACAAGTGAATTCCTCCCCATCTCGAATCATCAAATTGTTTGGAGTTACTTACCACCTTTACAGTAAAGGCTTGCCGCTATTTGGCCAGGATGCAGCTTGGGAATCACTATATGAGTTGCAGAAGTCCAGAGAGTTGACGCCTTTTTCAAATTCTATGGAGAGAAGTCTTGGTAACCCTTGTATTCCTAGAGGATATAAGCTGACAGTGAATGCTAGTGATGCACAACTTCTAGTTTCCTCAATGGGTGGAAACTTTTCTGCATGCAAATCTGAGGCTTTGGCATTATTAAACAAAAGACAAGATAAATGCATTGGTGCACCTTGCAAAATTGTCTCATCCTTTCCTTTTGAGTTACGAGGCAAGCCCGTTTCTACCCAGAACTTCTTATTTACTTCTGAGCTTTTTGGGCTGGTGCCGACGGCTTCTTTGTTTGAATTAGAGGCAGCAGGTCAACATTATTGTGAAGATGATTGGGAGAAACAGAAAAAGCAGCATCATAGCATTGTTGATTCAGATCTGTTGAAATATTGTTTTTCATCTGCATATATGGTGGCGCTGTTGCATGACAGACTAGGAATCCCCATGGATGAGAAAAGGGTTGGATATGCAAATGAGACCGGAAACATTCTCCTTGATTGGACACTGGGTGCTTTCCTTGTTGAAACAATGCTGGAGCCCCTTGAATGGGAACTTGATAATATGGGCCAGATTGTTGGAAACGAGTCAGTCACTTATTTCTCTTTCTTTGCTTTCCTTTTAATAGCTGTGTTTGCTGTATTCTTTGTACTGCAATCCCGGAAACCACAAATAAAGACTATATACGATTTAGAGAAGGGACGGTATATAATCACCCGTGTACCTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko05169 map00230 map00240 map05169
Pfam Domains
Protein Families
GDA1_CD39

Protein Analysis

529

Amino Acids

58.63

Weight (kDa)

8.93

Isoelectric Point (pI)

45.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 76 - 467 2.6e-49 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014823)

Species Orthologous Gene IDs
malus_domestica MD11G1180600.v1.1
prunus_persica Prupe.6G153100_v2.0.a1
pyrus_communis pycom11g15580
rosa_chinensis RchiOBHm_Chr5g0049751
rosa_laevigata RLG00000034644
rosa_multiflora Rmu_sc0016686.1_g000002 Rmu_sc0020783.1_g000001
rosa_roxburghii Rroxscaffold_1G00031680
rosa_rugosa Rorug05G0250800 Rorug05G0250800 Rorug05G0250900
rosa_samantha Rh5AG326900 Rh5BG338000 Rh5CG362600 Rh5DG350200
rosa_wichuraiana Rw0G018430 Rw5G030880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 495
Acc36I ACCTGC 2 cut(s) 682, 1157
AccB1I GGYRCC 3 cut(s) 305, 418, 1132
AccII CGCG 2 cut(s) 285, 372
AcoI YGGCCR 1 cut(s) 802
AcsI RAATTY 3 cut(s) 215, 727, 868
AcyI GRCGYC 2 cut(s) 492, 857
AdeI CACNNNGTG 1 cut(s) 1367
AfaI GTAC 2 cut(s) 1506, 1578
AfiI CCNNNNNNNGG 5 cut(s) 77, 546, 800, 1404, 1405
AgsI TTSAA 7 cut(s) 553, 671, 867, 1154, 1243, 1382, 1403
AjnI CCWGG 4 cut(s) 414, 577, 602, 804
AjuI GAANNNNNNNTTGG 2 cut(s) 437, 469
AluBI AGCT 8 cut(s) 321, 448, 472, 505, 815, 919, 1120, 1484
AluI AGCT 8 cut(s) 321, 448, 472, 505, 815, 919, 1120, 1484
Alw21I GWGCWC 2 cut(s) 474, 1039
Alw26I GTCTC 4 cut(s) 58, 499, 1057, 1328
Alw44I GTGCAC 1 cut(s) 1035
Ama87I CYCGRG 1 cut(s) 509
AoxI GGCC 5 cut(s) 376, 478, 564, 802, 1423
ApaI GGGCCC 1 cut(s) 568
ApaLI GTGCAC 1 cut(s) 1035
ApeKI GCWGC 7 cut(s) 7, 93, 108, 704, 812, 1163, 1210
ApoI RAATTY 3 cut(s) 215, 727, 868
ArsI GACNNNNNNTTYG 2 cut(s) 1129, 1161
Asp700I GAANNNNTTC 1 cut(s) 973
AspA2I CCTAGG 1 cut(s) 1580
AspLEI GCGC 5 cut(s) 98, 374, 435, 529, 1276
AspS9I GGNCC 4 cut(s) 377, 564, 565, 1423
AsuC2I CCSGG 2 cut(s) 541, 1516
AsuHPI GGTGA 3 cut(s) 593, 619, 1561
AvaI CYCGRG 1 cut(s) 509
AvrII CCTAGG 1 cut(s) 1580
AxyI CCTNAGG 1 cut(s) 648
BaeGI GKGCMC 3 cut(s) 423, 568, 1039
BaeI ACNNNNGTAYC 1 cut(s) 1560
BalI TGGCCA 1 cut(s) 804
BanI GGYRCC 3 cut(s) 305, 418, 1132
BanII GRGCYC 3 cut(s) 474, 568, 1398
BbsI GAAGAC 2 cut(s) 163, 280
Bbv12I GWGCWC 2 cut(s) 474, 1039
BbvI GCAGC 6 cut(s) 105, 120, 691, 824, 1175, 1222
BccI CCATC 3 cut(s) 7, 281, 745
BceAI ACGGC 3 cut(s) 319, 493, 1155
BciT130I CCWGG 4 cut(s) 416, 579, 604, 806
BcnI CCSGG 2 cut(s) 541, 1516
BcoDI GTCTC 4 cut(s) 58, 499, 1057, 1328
BfaI CTAG 5 cut(s) 906, 933, 950, 1292, 1581
BfoI RGCGCY 4 cut(s) 99, 436, 530, 1277
BfuAI ACCTGC 2 cut(s) 682, 1157
BglII AGATCT 1 cut(s) 1234
BisI GCNGC 9 cut(s) 8, 71, 94, 109, 705, 794, 813, 1164, 1211
BlnI CCTAGG 1 cut(s) 1580
BlsI GCNGC 9 cut(s) 9, 72, 95, 110, 706, 795, 814, 1165, 1212
Bme1390I CCNGG 6 cut(s) 416, 541, 579, 604, 806, 1516
BmeT110I CYCGRG 1 cut(s) 509
BmgT120I GGNCC 4 cut(s) 377, 564, 565, 1423
BmiI GGNNCC 6 cut(s) 307, 379, 420, 566, 1134, 1395
BmrFI CCNGG 6 cut(s) 416, 541, 579, 604, 806, 1516
BmrI ACTGGG 3 cut(s) 69, 669, 1373
BmsI GCATC 5 cut(s) 255, 288, 799, 928, 1222
BmuI ACTGGG 3 cut(s) 69, 669, 1373
BpiI GAAGAC 2 cut(s) 163, 280
BplI GAGNNNNNCTC 2 cut(s) 631, 663
BpmI CTGGAG 3 cut(s) 301, 398, 1412
Bpu10I CCTNAGC 1 cut(s) 530
BpuMI CCSGG 2 cut(s) 541, 1516
BsaBI GATNNNNATC 1 cut(s) 1233
BsaHI GRCGYC 2 cut(s) 492, 857
BsaI GGTCTC 2 cut(s) 58, 1328
BsaJI CCNNGG 5 cut(s) 481, 603, 625, 1302, 1580
BsaWI WCCGGW 1 cut(s) 1337
BsaXI ACNNNNNCTCC 4 cut(s) 167, 197, 215, 245
Bsc4I CCNNNNNNNGG 5 cut(s) 77, 546, 800, 1404, 1405
Bse118I RCCGGY 1 cut(s) 374
Bse1I ACTGG 4 cut(s) 75, 94, 664, 1368
Bse21I CCTNAGG 1 cut(s) 648
Bse8I GATNNNNATC 1 cut(s) 1233
BseBI CCWGG 4 cut(s) 416, 579, 604, 806
BseDI CCNNGG 5 cut(s) 481, 603, 625, 1302, 1580
BseGI GGATG 6 cut(s) 135, 273, 279, 814, 1055, 1312
BseJI GATNNNNATC 1 cut(s) 1233
BseLI CCNNNNNNNGG 5 cut(s) 77, 546, 800, 1404, 1405
BseMII CTCAG 5 cut(s) 459, 544, 662, 981, 1107
BseNI ACTGG 4 cut(s) 75, 94, 664, 1368
BseRI GAGGAG 7 cut(s) 143, 170, 259, 313, 316, 319, 440
BseSI GKGCMC 3 cut(s) 423, 568, 1039
BseXI GCAGC 6 cut(s) 105, 120, 691, 824, 1175, 1222
Bsh1236I CGCG 2 cut(s) 285, 372
Bsh1285I CGRYCG 1 cut(s) 370
BshFI GGCC 5 cut(s) 378, 480, 566, 804, 1425
BshNI GGYRCC 3 cut(s) 305, 418, 1132
BsiEI CGRYCG 1 cut(s) 370
BsiHKAI GWGCWC 2 cut(s) 474, 1039
BsiHKCI CYCGRG 1 cut(s) 509
BsiSI CCGG 5 cut(s) 375, 520, 540, 1338, 1516
BslFI GGGAC 2 cut(s) 694, 1569
BslI CCNNNNNNNGG 5 cut(s) 77, 546, 800, 1404, 1405
BsmAI GTCTC 4 cut(s) 58, 499, 1057, 1328
BsmBI CGTCTC 1 cut(s) 499
BsmFI GGGAC 2 cut(s) 694, 1569
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 5 cut(s) 378, 480, 566, 804, 1425
Bso31I GGTCTC 2 cut(s) 58, 1328
BsoBI CYCGRG 1 cut(s) 509
Bsp120I GGGCCC 1 cut(s) 564
Bsp1286I GDGCHC 5 cut(s) 423, 474, 568, 1039, 1398
Bsp143I GATC 1 cut(s) 1234
Bsp19I CCATGG 1 cut(s) 1302
BspANI GGCC 5 cut(s) 378, 480, 566, 804, 1425
BspCNI CTCAG 5 cut(s) 460, 543, 661, 982, 1108
BspFNI CGCG 2 cut(s) 285, 372
BspLI GGNNCC 6 cut(s) 307, 379, 420, 566, 1134, 1395
BspMI ACCTGC 2 cut(s) 682, 1157
BspT107I GGYRCC 3 cut(s) 305, 418, 1132
BspTNI GGTCTC 2 cut(s) 58, 1328
BsrFI RCCGGY 1 cut(s) 374
BsrI ACTGG 4 cut(s) 75, 94, 664, 1368
BssAI RCCGGY 1 cut(s) 374
BssECI CCNNGG 5 cut(s) 481, 603, 625, 1302, 1580
BssMI GATC 1 cut(s) 1234
BssNI GRCGYC 2 cut(s) 492, 857
BssT1I CCWWGG 3 cut(s) 625, 1302, 1580
Bst2UI CCWGG 4 cut(s) 416, 579, 604, 806
Bst4CI ACNGT 3 cut(s) 782, 925, 1560
Bst6I CTCTTC 2 cut(s) 245, 458
BstACI GRCGYC 2 cut(s) 492, 857
BstC8I GCNNGC 5 cut(s) 262, 376, 791, 982, 1082
BstDEI CTNAG 5 cut(s) 468, 530, 648, 990, 1116
BstDSI CCRYGG 1 cut(s) 1302
BstEII GGTNACC 1 cut(s) 890
BstF5I GGATG 6 cut(s) 135, 273, 279, 814, 1055, 1312
BstFNI CGCG 2 cut(s) 285, 372
BstH2I RGCGCY 4 cut(s) 99, 436, 530, 1277
BstHHI GCGC 5 cut(s) 98, 374, 435, 529, 1276
BstKTI GATC 1 cut(s) 1237
BstMAI GTCTC 4 cut(s) 58, 499, 1057, 1328
BstMBI GATC 1 cut(s) 1234
BstMCI CGRYCG 1 cut(s) 370
BstMWI GCNNNNNNNGC 6 cut(s) 93, 114, 620, 938, 1126, 1490
BstNI CCWGG 4 cut(s) 416, 579, 604, 806
BstNSI RCATGY 1 cut(s) 984
BstPI GGTNACC 1 cut(s) 890
BstSCI CCNGG 6 cut(s) 414, 539, 577, 602, 804, 1514
BstSLI GKGCMC 3 cut(s) 423, 568, 1039
BstUI CGCG 2 cut(s) 285, 372
BstV1I GCAGC 6 cut(s) 105, 120, 691, 824, 1175, 1222
BstV2I GAAGAC 2 cut(s) 163, 280
BstX2I RGATCY 1 cut(s) 1234
BstXI CCANNNNNNTGG 1 cut(s) 1433
BstYI RGATCY 1 cut(s) 1234
Bsu36I CCTNAGG 1 cut(s) 648
BsuRI GGCC 5 cut(s) 378, 480, 566, 804, 1425
BtgI CCRYGG 1 cut(s) 1302
BtsCI GGATG 6 cut(s) 135, 273, 279, 814, 1055, 1312
BtsIMutI CAGTG 5 cut(s) 82, 87, 657, 930, 1361
BveI ACCTGC 2 cut(s) 682, 1157
Cac8I GCNNGC 5 cut(s) 262, 376, 791, 982, 1082
CfoI GCGC 5 cut(s) 98, 374, 435, 529, 1276
Cfr10I RCCGGY 1 cut(s) 374
Cfr13I GGNCC 4 cut(s) 377, 564, 565, 1423
CseI GACGC 2 cut(s) 274, 865
Csp6I GTAC 2 cut(s) 1505, 1577
CspCI CAANNNNNGTGG 2 cut(s) 646, 681
CviAII CATG 3 cut(s) 981, 1283, 1303
CviQI GTAC 2 cut(s) 1505, 1577
DdeI CTNAG 5 cut(s) 468, 530, 648, 990, 1116
DpnI GATC 1 cut(s) 1236
DpnII GATC 1 cut(s) 1234
DraIII CACNNNGTG 1 cut(s) 1367
EaeI YGGCCR 1 cut(s) 802
Eam1104I CTCTTC 2 cut(s) 245, 458
EarI CTCTTC 2 cut(s) 245, 458
EciI GGCGGA 2 cut(s) 247, 337
Ecl136II GAGCTC 1 cut(s) 472
Eco130I CCWWGG 3 cut(s) 625, 1302, 1580
Eco24I GRGCYC 3 cut(s) 474, 568, 1398
Eco31I GGTCTC 2 cut(s) 58, 1328
Eco53kI GAGCTC 1 cut(s) 472
Eco81I CCTNAGG 1 cut(s) 648
Eco88I CYCGRG 1 cut(s) 509
Eco91I GGTNACC 1 cut(s) 890
EcoICRI GAGCTC 1 cut(s) 472
EcoO65I GGTNACC 1 cut(s) 890
EcoRI GAATTC 1 cut(s) 727
EcoRII CCWGG 4 cut(s) 414, 577, 602, 804
EcoT14I CCWWGG 3 cut(s) 625, 1302, 1580
EcoT22I ATGCAT 1 cut(s) 1031
EcoT38I GRGCYC 3 cut(s) 474, 568, 1398
ErhI CCWWGG 3 cut(s) 625, 1302, 1580
Esp3I CGTCTC 1 cut(s) 499
FaeI CATG 3 cut(s) 984, 1286, 1306
FalI AAGNNNNNCTT 2 cut(s) 437, 469
FaqI GGGAC 2 cut(s) 694, 1569
FatI CATG 3 cut(s) 980, 1282, 1302
FauI CCCGC 2 cut(s) 269, 341
Fnu4HI GCNGC 9 cut(s) 8, 71, 94, 109, 705, 794, 813, 1164, 1211
FokI GGATG 6 cut(s) 122, 260, 266, 821, 1042, 1319
FriOI GRGCYC 3 cut(s) 474, 568, 1398
Fsp4HI GCNGC 9 cut(s) 8, 71, 94, 109, 705, 794, 813, 1164, 1211
FspBI CTAG 5 cut(s) 906, 933, 950, 1292, 1581
GlaI GCGC 5 cut(s) 97, 373, 434, 528, 1275
GluI GCNGC 9 cut(s) 8, 71, 94, 109, 705, 794, 813, 1164, 1211
GsuI CTGGAG 3 cut(s) 301, 398, 1412
HaeII RGCGCY 4 cut(s) 99, 436, 530, 1277
HaeIII GGCC 5 cut(s) 378, 480, 566, 804, 1425
HapII CCGG 5 cut(s) 375, 520, 540, 1338, 1516
HgaI GACGC 2 cut(s) 274, 865
HhaI GCGC 5 cut(s) 98, 374, 435, 529, 1276
Hin1I GRCGYC 2 cut(s) 492, 857
Hin1II CATG 3 cut(s) 984, 1286, 1306
Hin6I GCGC 5 cut(s) 96, 372, 433, 527, 1274
HinP1I GCGC 5 cut(s) 96, 372, 433, 527, 1274
HincII GTYRAC 3 cut(s) 24, 855, 1172
HindII GTYRAC 3 cut(s) 24, 855, 1172
HindIII AAGCTT 1 cut(s) 503
HinfI GANTC 7 cut(s) 512, 570, 744, 821, 1229, 1296, 1442
HpaII CCGG 5 cut(s) 375, 520, 540, 1338, 1516
HphI GGTGA 3 cut(s) 593, 619, 1561
Hpy166II GTNNAC 5 cut(s) 24, 855, 1037, 1172, 1577
Hpy188I TCNGA 6 cut(s) 469, 490, 499, 991, 1117, 1234
Hpy188III TCNNGA 5 cut(s) 509, 650, 717, 741, 846
Hpy8I GTNNAC 5 cut(s) 24, 855, 1037, 1172, 1577
Hpy99I CGWCG 3 cut(s) 305, 479, 1141
HpyAV CCTTC 4 cut(s) 128, 361, 517, 1546
HpyCH4III ACNGT 3 cut(s) 782, 925, 1560
HpyCH4IV ACGT 2 cut(s) 492, 698
HpyF10VI GCNNNNNNNGC 6 cut(s) 93, 114, 620, 938, 1126, 1490
HpyF3I CTNAG 5 cut(s) 468, 530, 648, 990, 1116
HpySE526I ACGT 2 cut(s) 492, 698
Hsp92I GRCGYC 2 cut(s) 492, 857
Hsp92II CATG 3 cut(s) 984, 1286, 1306
HspAI GCGC 5 cut(s) 96, 372, 433, 527, 1274
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
Kzo9I GATC 1 cut(s) 1234
LmnI GCTCC 4 cut(s) 326, 402, 453, 1393
Lsp1109I GCAGC 6 cut(s) 105, 120, 691, 824, 1175, 1222
LweI GCATC 5 cut(s) 255, 288, 799, 928, 1222
MaeI CTAG 5 cut(s) 906, 933, 950, 1292, 1581
MaeII ACGT 2 cut(s) 492, 698
MaeIII GTNAC 5 cut(s) 694, 763, 890, 1071, 1447
MalI GATC 1 cut(s) 1236
MboI GATC 1 cut(s) 1234
MboII GAAGA 5 cut(s) 163, 232, 280, 445, 1196
MflI RGATCY 1 cut(s) 1234
MhlI GDGCHC 5 cut(s) 423, 474, 568, 1039, 1398
MlsI TGGCCA 1 cut(s) 804
MluCI AATT 7 cut(s) 215, 616, 727, 752, 868, 1047, 1154
MluNI TGGCCA 1 cut(s) 804
MlyI GAGTC 2 cut(s) 521, 1451
MmeI TCCRAC 2 cut(s) 1300, 1414
Mox20I TGGCCA 1 cut(s) 804
Mph1103I ATGCAT 1 cut(s) 1031
MroNI GCCGGC 1 cut(s) 374
MroXI GAANNNNTTC 1 cut(s) 973
MscI TGGCCA 1 cut(s) 804
MseI TTAA 2 cut(s) 1007, 1478
MslI CAYNNNNRTG 1 cut(s) 1179
Msp20I TGGCCA 1 cut(s) 804
MspI CCGG 5 cut(s) 375, 520, 540, 1338, 1516
MspR9I CCNGG 6 cut(s) 416, 541, 579, 604, 806, 1516
Mva1269I GAATGC 1 cut(s) 934
MvaI CCWGG 4 cut(s) 416, 579, 604, 806
MvnI CGCG 2 cut(s) 285, 372
MwoI GCNNNNNNNGC 6 cut(s) 93, 114, 620, 938, 1126, 1490
NaeI GCCGGC 1 cut(s) 376
NciI CCSGG 2 cut(s) 541, 1516
NcoI CCATGG 1 cut(s) 1302
NdeII GATC 1 cut(s) 1234
NgoMIV GCCGGC 1 cut(s) 374
NlaIII CATG 3 cut(s) 984, 1286, 1306
NlaIV GGNNCC 6 cut(s) 307, 379, 420, 566, 1134, 1395
NmeAIII GCCGAG 1 cut(s) 462
NmuCI GTSAC 1 cut(s) 1447
NsiI ATGCAT 1 cut(s) 1031
NspI RCATGY 1 cut(s) 984
PaeI GCATGC 1 cut(s) 984
PaeR7I CTCGAG 1 cut(s) 509
PcsI WCGNNNNNNNCGW 1 cut(s) 489
PctI GAATGC 1 cut(s) 934
PdiI GCCGGC 1 cut(s) 376
PdmI GAANNNNTTC 1 cut(s) 973
PfeI GAWTC 5 cut(s) 570, 744, 821, 1229, 1296
PfoI TCCNGGA 1 cut(s) 1514
PkrI GCNGC 9 cut(s) 9, 72, 95, 110, 706, 795, 814, 1165, 1212
PleI GAGTC 2 cut(s) 520, 1450
PpsI GAGTC 2 cut(s) 520, 1450
Psp124BI GAGCTC 1 cut(s) 474
Psp6I CCWGG 4 cut(s) 414, 577, 602, 804
PspEI GGTNACC 1 cut(s) 890
PspGI CCWGG 4 cut(s) 414, 577, 602, 804
PspN4I GGNNCC 6 cut(s) 307, 379, 420, 566, 1134, 1395
PspOMI GGGCCC 1 cut(s) 564
PspPI GGNCC 4 cut(s) 377, 564, 565, 1423
PsuI RGATCY 1 cut(s) 1234
RsaI GTAC 2 cut(s) 1506, 1578
RsaNI GTAC 2 cut(s) 1505, 1577
RseI CAYNNNNRTG 1 cut(s) 1179
SacI GAGCTC 1 cut(s) 474
SaqAI TTAA 2 cut(s) 1007, 1478
SatI GCNGC 9 cut(s) 8, 71, 94, 109, 705, 794, 813, 1164, 1211
Sau3AI GATC 1 cut(s) 1234
Sau96I GGNCC 4 cut(s) 377, 564, 565, 1423
SchI GAGTC 2 cut(s) 521, 1451
ScrFI CCNGG 6 cut(s) 416, 541, 579, 604, 806, 1516
SduI GDGCHC 5 cut(s) 423, 474, 568, 1039, 1398
SfaNI GCATC 5 cut(s) 255, 288, 799, 928, 1222
Sfr274I CTCGAG 1 cut(s) 509
SlaI CTCGAG 1 cut(s) 509
SmiMI CAYNNNNRTG 1 cut(s) 1179
SmlI CTYRAG 1 cut(s) 509
SmoI CTYRAG 1 cut(s) 509
SphI GCATGC 1 cut(s) 984
Sse9I AATT 7 cut(s) 215, 616, 727, 752, 868, 1047, 1154
SspI AATATT 1 cut(s) 1247
SspMI CTAG 5 cut(s) 906, 933, 950, 1292, 1581
SstI GAGCTC 1 cut(s) 474
StyD4I CCNGG 6 cut(s) 414, 539, 577, 602, 804, 1514
StyI CCWWGG 3 cut(s) 625, 1302, 1580
TaaI ACNGT 3 cut(s) 782, 925, 1560
TaiI ACGT 2 cut(s) 495, 701
TaqI TCGA 4 cut(s) 300, 474, 510, 742
TasI AATT 7 cut(s) 215, 616, 727, 752, 868, 1047, 1154
TatI WGTACW 1 cut(s) 1504
TauI GCSGC 2 cut(s) 73, 796
TfiI GAWTC 5 cut(s) 570, 744, 821, 1229, 1296
Tru1I TTAA 2 cut(s) 1007, 1478
Tru9I TTAA 2 cut(s) 1007, 1478
TscAI CASTG 5 cut(s) 82, 94, 664, 930, 1368
TseFI GTSAC 1 cut(s) 1447
TseI GCWGC 7 cut(s) 7, 93, 108, 704, 812, 1163, 1210
Tsp45I GTSAC 1 cut(s) 1447
TspDTI ATGAA 2 cut(s) 562, 1245
TspGWI ACGGA 1 cut(s) 91
TspRI CASTG 5 cut(s) 82, 94, 664, 930, 1368
VneI GTGCAC 1 cut(s) 1035
XapI RAATTY 3 cut(s) 215, 727, 868
XceI RCATGY 1 cut(s) 984
XhoI CTCGAG 1 cut(s) 509
XmaJI CCTAGG 1 cut(s) 1580
XmnI GAANNNNTTC 1 cut(s) 973
XspI CTAG 5 cut(s) 906, 933, 950, 1292, 1581
ZraI GACGTC 1 cut(s) 493
Zsp2I ATGCAT 1 cut(s) 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.