Rh5CG362600

Belongs to the GDA1 CD39 NTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0014823
Physical Location & Seq
Forward (+)
43522775 .. 43531071
8297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG362600.1

Sequence Viewer

Length: 1539 bp
ATGGATTTGTCAACCCTCCAAATCCAATCGAAGAGAGCTCCACCACCACCACCACCAGTCTCTCGCAACAATCGCCAATGCCTCCTCATCTCCTGCCTCTCTCTCCTCGCCCTCCCCTTCCTCTTCTACCTCGTCTCCACCGCCCACAAGCTCCACCTCTCCTCCAAATTCACCCACTCCGAATCCACCCTCTTCGGCATTGTCATCACCGCCGCCCCCACCGCCTCCCGCATCCGCGTCTTCCATTTCCTCGACGCCACCGCCACCGCTCCCTCCACCTCCTCCCGCTCTCGCCCCGCCCTCTCCTCCTTCGCCGCCCGCCCCGACGCCGCCGGCGCCTCCCTCGCGCCGCTGCTCCGCTTCGCCAAGTCGCAGGTGCCGATGAAAGAGCGAGCCAGTACGAAGCTCCTCTTGTTTGCTTCCCCGGAGCTCCAGGACTTGGGCCAGGAGATCGCCGAGAAGCTTCTCGAGTCGTGTAGGAAGGTGCTCAGATCTTCCGGGTTTTGGTTCAAGGACGATTGGGCCAGAGTGGTCTCAGGTGAAGAGCAAGGGGTTTATGCTTGGGTGAGTGCCAATTACGCTCTCGGAACATTGAAGAGTGAGGCTGAAGAAACCACTGGGATAGTTGAACTCGGTGGGGCTTCTTTGCAGGTTACATTTGCCCAAAAAGAAACACTCCAAGTGCAATCTTCTCCGTCTCGAGTTATCAAATTGTTTGGAGTTACTTATCACCTTTATAGCCACGGCTTGCCGCAATTTGGCCAGGATGCAGCTTGGGAATCATTGTATGAAAACTACAGAAAATCGACGCCTTTTTCAGATTCTAGAAAGGGGAGTATTGTTAACCCTTGTGTACCTAGAGGATATAAGCTGACAGTGAATGCCAGTGATGAACAACTTCTAGTGTCTTCGCTGGGCGGAAACTTTTCTGAATGCAAGTCTCAAGTTTTGGCACTATTAAAGAGCAAACGAGATAAATGCGTGCAGGCACCTTGCACAATTGTCTCATCATTTCCTTTCGAGATAGGGGGCAAGCCAATTTCCGCAAACTTCTTATTTACTTCTGAGCTTTTTGGGCTTGTTCCCAGGGCTTCTTTGTTTGAGTTGGAGGCAGCTGGTCTACAATACTGTGAAGACGAATGGGACAAACAGAAAAATCAACATAATTTTGTTGATGATTCAGATCTGCTGAAATATTGTTTTTCATCTGCTTATATGGTGGCGCTGTTGCATGACAGTCTAGGAATCCCCATGGATGAGAAAAGGGTTGGATTTGCAAACCAGACAGGAAATATTCTCCATGATTGGACTCTCGGTGCTTTCATTGTTGAAACAATGCTGGAACCCCTTGAATGGGAACTTGATAATAATCTGGGCCAGATTGTTGGAAATGAGTCACTCACGTATTTCTCTGTCTTTGCATTTCTTTTAATAGCTGTGTTTGCTGTATTCTTTGTATTGCAATCGCGGAAACCACAGTTAAAGACTATATACGATTTAGAAAAAGGACGCTATATTATTACACGTGTACGTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko05169 map00230 map00240 map05169
Pfam Domains
Protein Families
GDA1_CD39

Protein Analysis

512

Amino Acids

56.82

Weight (kDa)

7.99

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 58 - 450 1.4e-57 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014823)

Species Orthologous Gene IDs
malus_domestica MD11G1180600.v1.1
prunus_persica Prupe.6G153100_v2.0.a1
pyrus_communis pycom11g15580
rosa_chinensis RchiOBHm_Chr5g0049751
rosa_laevigata RLG00000034644
rosa_multiflora Rmu_sc0016686.1_g000002 Rmu_sc0020783.1_g000001
rosa_roxburghii Rroxscaffold_1G00031680
rosa_rugosa Rorug05G0250800 Rorug05G0250800 Rorug05G0250900
rosa_samantha Rh5AG326900 Rh5BG338000 Rh5CG362600 Rh5DG350200
rosa_wichuraiana Rw0G018430 Rw5G030880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 364
Acc36I ACCTGC 2 cut(s) 364, 640
AccB1I GGYRCC 3 cut(s) 335, 376, 988
AccB7I CCANNNNNTGG 1 cut(s) 439
AccBSI CCGCTC 2 cut(s) 269, 288
AccI GTMKAC 1 cut(s) 1120
AccII CGCG 3 cut(s) 237, 347, 1468
AcoI YGGCCR 1 cut(s) 760
AcsI RAATTY 1 cut(s) 167
AcuI CTGAAG 1 cut(s) 627
AcvI CACGTG 1 cut(s) 1526
AcyI GRCGYC 4 cut(s) 255, 327, 336, 809
AfaI GTAC 3 cut(s) 400, 855, 1530
AfiI CCNNNNNNNGG 5 cut(s) 439, 504, 758, 1353, 1354
AflIII ACRYGT 2 cut(s) 1523, 1525
AgsI TTSAA 5 cut(s) 511, 595, 629, 1331, 1352
AjnI CCWGG 4 cut(s) 432, 444, 762, 1085
Alw21I GWGCWC 3 cut(s) 40, 432, 489
Alw26I GTCTC 6 cut(s) 64, 139, 538, 702, 945, 1009
Ama87I CYCGRG 2 cut(s) 467, 699
AoxI GGCC 4 cut(s) 442, 522, 760, 1375
ApeKI GCWGC 3 cut(s) 352, 770, 1112
ApoI RAATTY 1 cut(s) 167
Asp700I GAANNNNTTC 2 cut(s) 897, 925
AspLEI GCGC 3 cut(s) 338, 349, 1225
AspS9I GGNCC 3 cut(s) 442, 522, 1375
AsuC2I CCSGG 2 cut(s) 425, 499
AsuHPI GGTGA 5 cut(s) 163, 199, 551, 577, 722
AvaI CYCGRG 2 cut(s) 467, 699
BalI TGGCCA 1 cut(s) 762
BanI GGYRCC 3 cut(s) 335, 376, 988
BanII GRGCYC 2 cut(s) 40, 432
BbrPI CACGTG 1 cut(s) 1526
BbsI GAAGAC 3 cut(s) 232, 900, 1140
Bbv12I GWGCWC 3 cut(s) 40, 432, 489
BbvI GCAGC 3 cut(s) 339, 782, 1124
BceAI ACGGC 1 cut(s) 760
BcgI CGANNNNNNTGC 2 cut(s) 960, 994
BciT130I CCWGG 4 cut(s) 434, 446, 764, 1087
BcnI CCSGG 2 cut(s) 425, 499
BcoDI GTCTC 6 cut(s) 64, 139, 538, 702, 945, 1009
BfaI CTAG 4 cut(s) 825, 858, 902, 1241
BfmI CTRYAG 1 cut(s) 796
BfoI RGCGCY 2 cut(s) 339, 1226
BfuAI ACCTGC 2 cut(s) 364, 640
BglII AGATCT 2 cut(s) 491, 1183
BisI GCNGC 8 cut(s) 213, 315, 330, 350, 353, 752, 771, 1113
BlsI GCNGC 8 cut(s) 214, 316, 331, 351, 354, 753, 772, 1114
Bme1390I CCNGG 6 cut(s) 425, 434, 446, 499, 764, 1087
BmeT110I CYCGRG 2 cut(s) 467, 699
BmgT120I GGNCC 3 cut(s) 442, 522, 1375
BmiI GGNNCC 4 cut(s) 337, 378, 990, 1344
BmrFI CCNGG 6 cut(s) 425, 434, 446, 499, 764, 1087
BmrI ACTGGG 1 cut(s) 627
BmsI GCATC 2 cut(s) 240, 757
BmuI ACTGGG 1 cut(s) 627
BpiI GAAGAC 3 cut(s) 232, 900, 1140
BpmI CTGGAG 1 cut(s) 416
BpuEI CTTGAG 1 cut(s) 927
BpuMI CCSGG 2 cut(s) 425, 499
BsaAI YACGTR 3 cut(s) 1404, 1526, 1532
BsaBI GATNNNNATC 2 cut(s) 1182, 1368
BsaHI GRCGYC 4 cut(s) 255, 327, 336, 809
BsaI GGTCTC 1 cut(s) 538
BsaJI CCNNGG 5 cut(s) 423, 742, 1085, 1086, 1251
BsaXI ACNNNNNCTCC 4 cut(s) 119, 146, 149, 176
Bsc4I CCNNNNNNNGG 5 cut(s) 439, 504, 758, 1353, 1354
Bse118I RCCGGY 1 cut(s) 332
Bse1I ACTGG 4 cut(s) 56, 396, 622, 885
Bse8I GATNNNNATC 2 cut(s) 1182, 1368
BseBI CCWGG 4 cut(s) 434, 446, 764, 1087
BseDI CCNNGG 5 cut(s) 423, 742, 1085, 1086, 1251
BseGI GGATG 3 cut(s) 231, 772, 1261
BseJI GATNNNNATC 2 cut(s) 1182, 1368
BseLI CCNNNNNNNGG 5 cut(s) 439, 504, 758, 1353, 1354
BseMII CTCAG 3 cut(s) 502, 549, 1056
BseNI ACTGG 4 cut(s) 56, 396, 622, 885
BseRI GAGGAG 6 cut(s) 74, 95, 151, 271, 295, 398
BseXI GCAGC 3 cut(s) 339, 782, 1124
BseYI CCCAGC 1 cut(s) 913
BsgI GTGCAG 1 cut(s) 1004
Bsh1236I CGCG 3 cut(s) 237, 347, 1468
BshFI GGCC 4 cut(s) 444, 524, 762, 1377
BshNI GGYRCC 3 cut(s) 335, 376, 988
BsiHKAI GWGCWC 3 cut(s) 40, 432, 489
BsiHKCI CYCGRG 2 cut(s) 467, 699
BsiSI CCGG 3 cut(s) 333, 425, 498
BslFI GGGAC 1 cut(s) 1157
BslI CCNNNNNNNGG 5 cut(s) 439, 504, 758, 1353, 1354
BsmAI GTCTC 6 cut(s) 64, 139, 538, 702, 945, 1009
BsmBI CGTCTC 2 cut(s) 139, 702
BsmFI GGGAC 1 cut(s) 1157
BsmI GAATGC 2 cut(s) 886, 938
BsnI GGCC 4 cut(s) 444, 524, 762, 1377
Bso31I GGTCTC 1 cut(s) 538
BsoBI CYCGRG 2 cut(s) 467, 699
Bsp1286I GDGCHC 3 cut(s) 40, 432, 489
Bsp143I GATC 3 cut(s) 450, 491, 1183
Bsp19I CCATGG 1 cut(s) 1251
BspANI GGCC 4 cut(s) 444, 524, 762, 1377
BspCNI CTCAG 3 cut(s) 501, 548, 1057
BspFNI CGCG 3 cut(s) 237, 347, 1468
BspLI GGNNCC 4 cut(s) 337, 378, 990, 1344
BspMI ACCTGC 2 cut(s) 364, 640
BspQI GCTCTTC 1 cut(s) 537
BspT107I GGYRCC 3 cut(s) 335, 376, 988
BspTNI GGTCTC 1 cut(s) 538
BsrBI CCGCTC 2 cut(s) 269, 288
BsrFI RCCGGY 1 cut(s) 332
BsrI ACTGG 4 cut(s) 56, 396, 622, 885
BssAI RCCGGY 1 cut(s) 332
BssECI CCNNGG 5 cut(s) 423, 742, 1085, 1086, 1251
BssMI GATC 3 cut(s) 450, 491, 1183
BssNI GRCGYC 4 cut(s) 255, 327, 336, 809
BssT1I CCWWGG 1 cut(s) 1251
Bst2UI CCWGG 4 cut(s) 434, 446, 764, 1087
Bst4CI ACNGT 4 cut(s) 877, 1130, 1238, 1479
Bst6I CTCTTC 5 cut(s) 26, 128, 197, 537, 590
BstACI GRCGYC 4 cut(s) 255, 327, 336, 809
BstBAI YACGTR 3 cut(s) 1404, 1526, 1532
BstC8I GCNNGC 7 cut(s) 319, 334, 393, 749, 983, 987, 1034
BstDEI CTNAG 3 cut(s) 488, 535, 1065
BstDSI CCRYGG 2 cut(s) 742, 1251
BstF5I GGATG 3 cut(s) 231, 772, 1261
BstFNI CGCG 3 cut(s) 237, 347, 1468
BstH2I RGCGCY 2 cut(s) 339, 1226
BstHHI GCGC 3 cut(s) 338, 349, 1225
BstKTI GATC 3 cut(s) 453, 494, 1186
BstMAI GTCTC 6 cut(s) 64, 139, 538, 702, 945, 1009
BstMBI GATC 3 cut(s) 450, 491, 1183
BstMWI GCNNNNNNNGC 7 cut(s) 72, 221, 335, 344, 578, 1075, 1442
BstNI CCWGG 4 cut(s) 434, 446, 764, 1087
BstSCI CCNGG 6 cut(s) 423, 432, 444, 497, 762, 1085
BstSFI CTRYAG 1 cut(s) 796
BstSNI TACGTA 1 cut(s) 1532
BstUI CGCG 3 cut(s) 237, 347, 1468
BstV1I GCAGC 3 cut(s) 339, 782, 1124
BstV2I GAAGAC 3 cut(s) 232, 900, 1140
BstX2I RGATCY 2 cut(s) 491, 1183
BstXI CCANNNNNNTGG 1 cut(s) 1385
BstYI RGATCY 2 cut(s) 491, 1183
BsuRI GGCC 4 cut(s) 444, 524, 762, 1377
BtgI CCRYGG 2 cut(s) 742, 1251
BtsCI GGATG 3 cut(s) 231, 772, 1261
BtsIMutI CAGTG 3 cut(s) 615, 882, 892
BveI ACCTGC 2 cut(s) 364, 640
Cac8I GCNNGC 7 cut(s) 319, 334, 393, 749, 983, 987, 1034
CfoI GCGC 3 cut(s) 338, 349, 1225
Cfr10I RCCGGY 1 cut(s) 332
Cfr13I GGNCC 3 cut(s) 442, 522, 1375
CseI GACGC 5 cut(s) 226, 263, 335, 817, 1518
Csp6I GTAC 3 cut(s) 399, 854, 1529
CviAII CATG 3 cut(s) 1232, 1252, 1301
CviQI GTAC 3 cut(s) 399, 854, 1529
DdeI CTNAG 3 cut(s) 488, 535, 1065
DinI GGCGCC 1 cut(s) 337
DpnI GATC 3 cut(s) 452, 493, 1185
DpnII GATC 3 cut(s) 450, 491, 1183
EaeI YGGCCR 1 cut(s) 760
Eam1104I CTCTTC 5 cut(s) 26, 128, 197, 537, 590
EarI CTCTTC 5 cut(s) 26, 128, 197, 537, 590
EciI GGCGGA 1 cut(s) 933
Ecl136II GAGCTC 2 cut(s) 38, 430
Eco105I TACGTA 1 cut(s) 1532
Eco130I CCWWGG 1 cut(s) 1251
Eco24I GRGCYC 2 cut(s) 40, 432
Eco31I GGTCTC 1 cut(s) 538
Eco53kI GAGCTC 2 cut(s) 38, 430
Eco57I CTGAAG 1 cut(s) 627
Eco72I CACGTG 1 cut(s) 1526
Eco88I CYCGRG 2 cut(s) 467, 699
EcoICRI GAGCTC 2 cut(s) 38, 430
EcoRII CCWGG 4 cut(s) 432, 444, 762, 1085
EcoT14I CCWWGG 1 cut(s) 1251
EcoT38I GRGCYC 2 cut(s) 40, 432
EgeI GGCGCC 1 cut(s) 337
EheI GGCGCC 1 cut(s) 337
ErhI CCWWGG 1 cut(s) 1251
Esp3I CGTCTC 2 cut(s) 139, 702
FaeI CATG 3 cut(s) 1235, 1255, 1304
FalI AAGNNNNNCTT 2 cut(s) 395, 427
FaqI GGGAC 1 cut(s) 1157
FatI CATG 3 cut(s) 1231, 1251, 1300
FauI CCCGC 4 cut(s) 236, 293, 304, 326
FblI GTMKAC 1 cut(s) 1120
Fnu4HI GCNGC 8 cut(s) 213, 315, 330, 350, 353, 752, 771, 1113
FokI GGATG 3 cut(s) 218, 779, 1268
FriOI GRGCYC 2 cut(s) 40, 432
Fsp4HI GCNGC 8 cut(s) 213, 315, 330, 350, 353, 752, 771, 1113
FspBI CTAG 4 cut(s) 825, 858, 902, 1241
GlaI GCGC 3 cut(s) 337, 348, 1224
GluI GCNGC 8 cut(s) 213, 315, 330, 350, 353, 752, 771, 1113
GsaI CCCAGC 1 cut(s) 917
GsuI CTGGAG 1 cut(s) 416
HaeII RGCGCY 2 cut(s) 339, 1226
HaeIII GGCC 4 cut(s) 444, 524, 762, 1377
HapII CCGG 3 cut(s) 333, 425, 498
HgaI GACGC 5 cut(s) 226, 263, 335, 817, 1518
HhaI GCGC 3 cut(s) 338, 349, 1225
Hin1I GRCGYC 4 cut(s) 255, 327, 336, 809
Hin1II CATG 3 cut(s) 1235, 1255, 1304
Hin6I GCGC 3 cut(s) 336, 347, 1223
HinP1I GCGC 3 cut(s) 336, 347, 1223
HincII GTYRAC 2 cut(s) 12, 844
HindII GTYRAC 2 cut(s) 12, 844
HindIII AAGCTT 1 cut(s) 461
HinfI GANTC 8 cut(s) 182, 470, 779, 821, 1178, 1245, 1309, 1394
HpaI GTTAAC 1 cut(s) 844
HpaII CCGG 3 cut(s) 333, 425, 498
HphI GGTGA 5 cut(s) 163, 199, 551, 577, 722
Hpy166II GTNNAC 5 cut(s) 12, 844, 854, 1121, 1529
Hpy188I TCNGA 7 cut(s) 181, 491, 587, 820, 931, 1066, 1183
Hpy188III TCNNGA 4 cut(s) 467, 699, 825, 1021
Hpy8I GTNNAC 5 cut(s) 12, 844, 854, 1121, 1529
Hpy99I CGWCG 3 cut(s) 257, 329, 811
HpyAV CCTTC 3 cut(s) 127, 319, 475
HpyCH4III ACNGT 4 cut(s) 877, 1130, 1238, 1479
HpyCH4IV ACGT 3 cut(s) 1403, 1525, 1531
HpyF10VI GCNNNNNNNGC 7 cut(s) 72, 221, 335, 344, 578, 1075, 1442
HpyF3I CTNAG 3 cut(s) 488, 535, 1065
HpySE526I ACGT 3 cut(s) 1403, 1525, 1531
Hsp92I GRCGYC 4 cut(s) 255, 327, 336, 809
Hsp92II CATG 3 cut(s) 1235, 1255, 1304
HspAI GCGC 3 cut(s) 336, 347, 1223
KasI GGCGCC 1 cut(s) 335
KroI GCCGGC 1 cut(s) 332
KroNI GCCGGC 1 cut(s) 334
KspAI GTTAAC 1 cut(s) 844
Kzo9I GATC 3 cut(s) 450, 491, 1183
LguI GCTCTTC 1 cut(s) 537
LmnI GCTCC 7 cut(s) 43, 156, 274, 360, 411, 427, 435
Lsp1109I GCAGC 3 cut(s) 339, 782, 1124
LweI GCATC 2 cut(s) 240, 757
MaeI CTAG 4 cut(s) 825, 858, 902, 1241
MaeII ACGT 3 cut(s) 1403, 1525, 1531
MaeIII GTNAC 3 cut(s) 652, 721, 1395
MalI GATC 3 cut(s) 452, 493, 1185
MbiI CCGCTC 2 cut(s) 269, 288
MboI GATC 3 cut(s) 450, 491, 1183
MfeI CAATTG 1 cut(s) 999
MflI RGATCY 2 cut(s) 491, 1183
MhlI GDGCHC 3 cut(s) 40, 432, 489
MlsI TGGCCA 1 cut(s) 762
MluCI AATT 7 cut(s) 167, 574, 710, 755, 999, 1038, 1165
MluNI TGGCCA 1 cut(s) 762
Mly113I GGCGCC 1 cut(s) 336
MlyI GAGTC 3 cut(s) 479, 1303, 1403
MmeI TCCRAC 3 cut(s) 1086, 1249, 1366
Mox20I TGGCCA 1 cut(s) 762
MreI CGCCGGCG 1 cut(s) 332
MroNI GCCGGC 1 cut(s) 332
MroXI GAANNNNTTC 2 cut(s) 897, 925
MscI TGGCCA 1 cut(s) 762
MseI TTAA 4 cut(s) 843, 959, 1430, 1481
Msp20I TGGCCA 1 cut(s) 762
MspA1I CMGCKG 2 cut(s) 352, 1115
MspI CCGG 3 cut(s) 333, 425, 498
MspR9I CCNGG 6 cut(s) 425, 434, 446, 499, 764, 1087
MunI CAATTG 1 cut(s) 999
Mva1269I GAATGC 2 cut(s) 886, 938
MvaI CCWGG 4 cut(s) 434, 446, 764, 1087
MvnI CGCG 3 cut(s) 237, 347, 1468
MwoI GCNNNNNNNGC 7 cut(s) 72, 221, 335, 344, 578, 1075, 1442
NaeI GCCGGC 1 cut(s) 334
NarI GGCGCC 1 cut(s) 336
NciI CCSGG 2 cut(s) 425, 499
NcoI CCATGG 1 cut(s) 1251
NdeII GATC 3 cut(s) 450, 491, 1183
NgoMIV GCCGGC 1 cut(s) 332
NlaIII CATG 3 cut(s) 1235, 1255, 1304
NlaIV GGNNCC 4 cut(s) 337, 378, 990, 1344
NmeAIII GCCGAG 1 cut(s) 481
NmuCI GTSAC 1 cut(s) 1395
PaeR7I CTCGAG 2 cut(s) 467, 699
PaqCI CACCTGC 1 cut(s) 364
PasI CCCWGGG 1 cut(s) 1086
PciSI GCTCTTC 1 cut(s) 537
PcsI WCGNNNNNNNCGW 1 cut(s) 377
PctI GAATGC 2 cut(s) 886, 938
PdiI GCCGGC 1 cut(s) 334
PdmI GAANNNNTTC 2 cut(s) 897, 925
PfeI GAWTC 5 cut(s) 182, 779, 821, 1178, 1245
PflMI CCANNNNNTGG 1 cut(s) 439
PfoI TCCNGGA 1 cut(s) 432
PkrI GCNGC 8 cut(s) 214, 316, 331, 351, 354, 753, 772, 1114
PleI GAGTC 3 cut(s) 478, 1303, 1402
PluTI GGCGCC 1 cut(s) 339
PmaCI CACGTG 1 cut(s) 1526
PmlI CACGTG 1 cut(s) 1526
PpsI GAGTC 3 cut(s) 478, 1303, 1402
Ppu21I YACGTR 3 cut(s) 1404, 1526, 1532
Psp124BI GAGCTC 2 cut(s) 40, 432
Psp6I CCWGG 4 cut(s) 432, 444, 762, 1085
PspCI CACGTG 1 cut(s) 1526
PspFI CCCAGC 1 cut(s) 913
PspGI CCWGG 4 cut(s) 432, 444, 762, 1085
PspN4I GGNNCC 4 cut(s) 337, 378, 990, 1344
PspPI GGNCC 3 cut(s) 442, 522, 1375
PsuI RGATCY 2 cut(s) 491, 1183
PvuII CAGCTG 1 cut(s) 1115
RsaI GTAC 3 cut(s) 400, 855, 1530
RsaNI GTAC 3 cut(s) 399, 854, 1529
SacI GAGCTC 2 cut(s) 40, 432
SapI GCTCTTC 1 cut(s) 537
SaqAI TTAA 4 cut(s) 843, 959, 1430, 1481
SatI GCNGC 8 cut(s) 213, 315, 330, 350, 353, 752, 771, 1113
Sau3AI GATC 3 cut(s) 450, 491, 1183
Sau96I GGNCC 3 cut(s) 442, 522, 1375
SchI GAGTC 3 cut(s) 479, 1303, 1403
ScrFI CCNGG 6 cut(s) 425, 434, 446, 499, 764, 1087
SduI GDGCHC 3 cut(s) 40, 432, 489
SfaNI GCATC 2 cut(s) 240, 757
SfcI CTRYAG 1 cut(s) 796
SfoI GGCGCC 1 cut(s) 337
Sfr274I CTCGAG 2 cut(s) 467, 699
SgrAI CRCCGGYG 1 cut(s) 332
SlaI CTCGAG 2 cut(s) 467, 699
SmlI CTYRAG 3 cut(s) 467, 699, 942
SmoI CTYRAG 3 cut(s) 467, 699, 942
SnaBI TACGTA 1 cut(s) 1532
Sse9I AATT 7 cut(s) 167, 574, 710, 755, 999, 1038, 1165
SspDI GGCGCC 1 cut(s) 335
SspI AATATT 2 cut(s) 1196, 1294
SspMI CTAG 4 cut(s) 825, 858, 902, 1241
SstI GAGCTC 2 cut(s) 40, 432
StyD4I CCNGG 6 cut(s) 423, 432, 444, 497, 762, 1085
StyI CCWWGG 1 cut(s) 1251
TaaI ACNGT 4 cut(s) 877, 1130, 1238, 1479
TaiI ACGT 3 cut(s) 1406, 1528, 1534
TaqI TCGA 6 cut(s) 29, 252, 468, 700, 806, 1020
TasI AATT 7 cut(s) 167, 574, 710, 755, 999, 1038, 1165
TauI GCSGC 5 cut(s) 215, 317, 332, 352, 754
TfiI GAWTC 5 cut(s) 182, 779, 821, 1178, 1245
Tru1I TTAA 4 cut(s) 843, 959, 1430, 1481
Tru9I TTAA 4 cut(s) 843, 959, 1430, 1481
TscAI CASTG 3 cut(s) 622, 882, 892
TseFI GTSAC 1 cut(s) 1395
TseI GCWGC 3 cut(s) 352, 770, 1112
Tsp45I GTSAC 1 cut(s) 1395
TspDTI ATGAA 5 cut(s) 398, 804, 906, 1194, 1312
TspGWI ACGGA 1 cut(s) 684
TspRI CASTG 3 cut(s) 622, 882, 892
Van91I CCANNNNNTGG 1 cut(s) 439
XapI RAATTY 1 cut(s) 167
XbaI TCTAGA 1 cut(s) 824
XhoI CTCGAG 2 cut(s) 467, 699
XmiI GTMKAC 1 cut(s) 1120
XmnI GAANNNNTTC 2 cut(s) 897, 925
XspI CTAG 4 cut(s) 825, 858, 902, 1241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.