Rw5G030880

Belongs to the GDA1 CD39 NTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0014823
Physical Location & Seq
Forward (+)
49490262 .. 49498629
8368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G030880.1

Sequence Viewer

Length: 1533 bp
ATGGATTTGTCAACCCTCCAAATCCAATCGAAGAGAGGTCCACCACCACCACCACCAGTCTCTCGCAACAATCGCCAATGCCTCCTCATCTCCTGCCTCTCTCTCCTCGCCCTCCCCTTCCTCTTCTACCTCGTCTCCACCGCCCTCAAGCTCCACCTCTCCCCCAAATTCACCCACTCCGAATCCACCCTCTTCGGCATTGTCATCACCGCCGCCCCCACCGCCTCCCGCATCCGCGTCTTCCATTTCCTCGACGCCACCGCTCCCTCCACCTCCTCCCGCTCTCGCCCCGCCCTCTCCTCCTTCGCCGCCAGCCCCGACGCCGCCGGCGCCTCCCTCGCGCCGCTGCTCCGCTTCGCCAAGTCGCAGGTGCCGATGAAAGAGCGAGCCAGTACGAAGCTGCTCTTGTTTGCTTCCCCGGAGCTCCAGGACTTGGGCCAGGAGATCGCCGAGAAGCTTCTCGAGTCGTGTAGGAAGGTGCTCAGATCTTCCGGGTTCTGGTTCAAGGACGATTGGGCCAGAGTGGTCTCAGGTGAAGAGCAAGGGGTTTATGCTTGGGTGAGTGCCAATTACGCTCTCGGAACATTGAAGAGTGAGGCTGAAGAAACCACTGGGATAGTTGAACTCGGTGGGGCTTCTTTGCAGGTTACATTTGCCCAAAAAGAAACACTCCAAGTGCAATCTTCTCCGTCTCGAGTTATCAAATTGTTTGGAGTTACTTATCACCTTTATAGCCACGGCTTGCCGCAATTTGGCCAGGATGCGGCTTGGGAATCATTGTATGAAAACTACAGAAAATCGACGCCTTTTTCAGATTCTAGAAAGGGGAATCTTGTTCACCCTTGCGTACCTAGAGGATATAAGCTGACAGTGAATGCCAGTGATGAACAACTTCTAGTGTCTTCGCTAGGCGGAAACTTTTCTGAATGCAAGTCTCAAGTTTTGGCACTATTAAAGAGCAAACAAGATAAATGCGTGCAGGCACCTTGCACAATTGTCTCATCATTTCCTTTCGAGATAGGGGGCAAGCCAATTTCCGCAAACTTCTTATTTACATCTGAGATTTTTGGGCTTGTTCCCAGGGCTTCTTTGTTTGAGTTGGAGGCAGCTGGTCTACAATACTGTGAAGACGAATGGGACAAACAGAAAAATCAACATAATATTGTTGATGATTCAGATCTGCTGAAATATTGTTTCTCATCTGCTTATATGGTGGCACTGTTGCATGACAGTCTAGGAATCCCCATGGATGAGAAAAGGGTTGGATTTGCAAACCAGACTGGAAATATTCTCCATGATTGGACTCTCGGTGCTTTCATTGTTGAAACAATGCTGGAACCCCTTGAATGGGAACTTGATAATAATCTGGGCCAGATTGTTGGAAATGAGTCTGTCACGTATTTCTCTGTCTTTGCATTTCTTTTAATAGCTGTGTTTGCTGTATTCTTTGTATTGCAATCGCGGAAACCACAGTTAAAGACTATATACGATTTAGAAAAAGGACGCTATATTATTACACGTGTACGTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko05169 map00230 map00240 map05169
Pfam Domains
Protein Families
GDA1_CD39

Protein Analysis

510

Amino Acids

56.52

Weight (kDa)

7.1

Isoelectric Point (pI)

47.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 58 - 448 1.8e-57 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014823)

Species Orthologous Gene IDs
malus_domestica MD11G1180600.v1.1
prunus_persica Prupe.6G153100_v2.0.a1
pyrus_communis pycom11g15580
rosa_chinensis RchiOBHm_Chr5g0049751
rosa_laevigata RLG00000034644
rosa_multiflora Rmu_sc0016686.1_g000002 Rmu_sc0020783.1_g000001
rosa_roxburghii Rroxscaffold_1G00031680
rosa_rugosa Rorug05G0250800 Rorug05G0250800 Rorug05G0250900
rosa_samantha Rh5AG326900 Rh5BG338000 Rh5CG362600 Rh5DG350200
rosa_wichuraiana Rw0G018430 Rw5G030880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 358
Acc36I ACCTGC 2 cut(s) 358, 634
AccB1I GGYRCC 3 cut(s) 329, 370, 982
AccB7I CCANNNNNTGG 1 cut(s) 433
AccBSI CCGCTC 2 cut(s) 263, 282
AccI GTMKAC 1 cut(s) 1114
AccII CGCG 3 cut(s) 237, 341, 1462
AcoI YGGCCR 1 cut(s) 754
AcsI RAATTY 1 cut(s) 167
AcuI CTGAAG 1 cut(s) 621
AcvI CACGTG 1 cut(s) 1520
AcyI GRCGYC 4 cut(s) 255, 321, 330, 803
AfaI GTAC 3 cut(s) 394, 849, 1524
AfiI CCNNNNNNNGG 6 cut(s) 433, 498, 752, 763, 1347, 1348
AflIII ACRYGT 2 cut(s) 1517, 1519
AgsI TTSAA 5 cut(s) 505, 589, 623, 1325, 1346
AjnI CCWGG 4 cut(s) 426, 438, 756, 1079
AluBI AGCT 7 cut(s) 151, 400, 424, 457, 865, 1109, 1430
AluI AGCT 7 cut(s) 151, 400, 424, 457, 865, 1109, 1430
Alw21I GWGCWC 2 cut(s) 426, 483
Alw26I GTCTC 6 cut(s) 64, 139, 532, 696, 939, 1003
Ama87I CYCGRG 2 cut(s) 461, 693
AoxI GGCC 4 cut(s) 436, 516, 754, 1369
ApeKI GCWGC 3 cut(s) 346, 400, 1106
ApoI RAATTY 1 cut(s) 167
Asp700I GAANNNNTTC 2 cut(s) 891, 919
AspLEI GCGC 2 cut(s) 332, 343
AspS9I GGNCC 4 cut(s) 38, 436, 516, 1369
AsuC2I CCSGG 2 cut(s) 419, 493
AsuHPI GGTGA 6 cut(s) 163, 199, 545, 571, 716, 830
AvaI CYCGRG 2 cut(s) 461, 693
AvaII GGWCC 1 cut(s) 38
BalI TGGCCA 1 cut(s) 756
BanI GGYRCC 3 cut(s) 329, 370, 982
BanII GRGCYC 1 cut(s) 426
BbrPI CACGTG 1 cut(s) 1520
BbsI GAAGAC 3 cut(s) 232, 894, 1134
Bbv12I GWGCWC 2 cut(s) 426, 483
BbvI GCAGC 3 cut(s) 333, 387, 1118
BceAI ACGGC 1 cut(s) 754
BciT130I CCWGG 4 cut(s) 428, 440, 758, 1081
BcnI CCSGG 2 cut(s) 419, 493
BcoDI GTCTC 6 cut(s) 64, 139, 532, 696, 939, 1003
BfaI CTAG 5 cut(s) 819, 852, 896, 908, 1235
BfmI CTRYAG 1 cut(s) 790
BfoI RGCGCY 1 cut(s) 333
BfuAI ACCTGC 2 cut(s) 358, 634
BglII AGATCT 2 cut(s) 485, 1177
BisI GCNGC 9 cut(s) 213, 309, 324, 344, 347, 401, 746, 765, 1107
BlsI GCNGC 9 cut(s) 214, 310, 325, 345, 348, 402, 747, 766, 1108
Bme1390I CCNGG 6 cut(s) 419, 428, 440, 493, 758, 1081
Bme18I GGWCC 1 cut(s) 38
BmeT110I CYCGRG 2 cut(s) 461, 693
BmgT120I GGNCC 4 cut(s) 38, 436, 516, 1369
BmiI GGNNCC 4 cut(s) 331, 372, 984, 1338
BmrFI CCNGG 6 cut(s) 419, 428, 440, 493, 758, 1081
BmrI ACTGGG 1 cut(s) 621
BmsI GCATC 2 cut(s) 240, 751
BmuI ACTGGG 1 cut(s) 621
BpiI GAAGAC 3 cut(s) 232, 894, 1134
BpmI CTGGAG 1 cut(s) 410
BpuEI CTTGAG 2 cut(s) 131, 921
BpuMI CCSGG 2 cut(s) 419, 493
BsaAI YACGTR 3 cut(s) 1398, 1520, 1526
BsaBI GATNNNNATC 2 cut(s) 1176, 1362
BsaHI GRCGYC 4 cut(s) 255, 321, 330, 803
BsaI GGTCTC 1 cut(s) 532
BsaJI CCNNGG 5 cut(s) 417, 736, 1079, 1080, 1245
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 6 cut(s) 433, 498, 752, 763, 1347, 1348
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 5 cut(s) 56, 390, 616, 879, 1285
Bse8I GATNNNNATC 2 cut(s) 1176, 1362
BseBI CCWGG 4 cut(s) 428, 440, 758, 1081
BseDI CCNNGG 5 cut(s) 417, 736, 1079, 1080, 1245
BseGI GGATG 3 cut(s) 231, 766, 1255
BseJI GATNNNNATC 2 cut(s) 1176, 1362
BseLI CCNNNNNNNGG 6 cut(s) 433, 498, 752, 763, 1347, 1348
BseMII CTCAG 3 cut(s) 496, 543, 1050
BseNI ACTGG 5 cut(s) 56, 390, 616, 879, 1285
BseRI GAGGAG 4 cut(s) 74, 95, 265, 289
BseXI GCAGC 3 cut(s) 333, 387, 1118
BsgI GTGCAG 1 cut(s) 998
Bsh1236I CGCG 3 cut(s) 237, 341, 1462
BshFI GGCC 4 cut(s) 438, 518, 756, 1371
BshNI GGYRCC 3 cut(s) 329, 370, 982
BsiHKAI GWGCWC 2 cut(s) 426, 483
BsiHKCI CYCGRG 2 cut(s) 461, 693
BsiSI CCGG 3 cut(s) 327, 419, 492
BslFI GGGAC 1 cut(s) 1151
BslI CCNNNNNNNGG 6 cut(s) 433, 498, 752, 763, 1347, 1348
BsmAI GTCTC 6 cut(s) 64, 139, 532, 696, 939, 1003
BsmBI CGTCTC 2 cut(s) 139, 696
BsmFI GGGAC 1 cut(s) 1151
BsmI GAATGC 2 cut(s) 880, 932
BsnI GGCC 4 cut(s) 438, 518, 756, 1371
Bso31I GGTCTC 1 cut(s) 532
BsoBI CYCGRG 2 cut(s) 461, 693
Bsp1286I GDGCHC 2 cut(s) 426, 483
Bsp143I GATC 3 cut(s) 444, 485, 1177
Bsp19I CCATGG 1 cut(s) 1245
BspANI GGCC 4 cut(s) 438, 518, 756, 1371
BspCNI CTCAG 3 cut(s) 495, 542, 1051
BspFNI CGCG 3 cut(s) 237, 341, 1462
BspLI GGNNCC 4 cut(s) 331, 372, 984, 1338
BspMI ACCTGC 2 cut(s) 358, 634
BspQI GCTCTTC 1 cut(s) 531
BspT107I GGYRCC 3 cut(s) 329, 370, 982
BspTNI GGTCTC 1 cut(s) 532
BsrBI CCGCTC 2 cut(s) 263, 282
BsrFI RCCGGY 1 cut(s) 326
BsrI ACTGG 5 cut(s) 56, 390, 616, 879, 1285
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 5 cut(s) 417, 736, 1079, 1080, 1245
BssMI GATC 3 cut(s) 444, 485, 1177
BssNI GRCGYC 4 cut(s) 255, 321, 330, 803
BssT1I CCWWGG 1 cut(s) 1245
Bst2UI CCWGG 4 cut(s) 428, 440, 758, 1081
Bst4CI ACNGT 5 cut(s) 871, 1124, 1221, 1232, 1473
Bst6I CTCTTC 5 cut(s) 26, 128, 197, 531, 584
BstACI GRCGYC 4 cut(s) 255, 321, 330, 803
BstBAI YACGTR 3 cut(s) 1398, 1520, 1526
BstC8I GCNNGC 7 cut(s) 313, 328, 387, 743, 977, 981, 1028
BstDEI CTNAG 3 cut(s) 482, 529, 1059
BstDSI CCRYGG 2 cut(s) 736, 1245
BstF5I GGATG 3 cut(s) 231, 766, 1255
BstFNI CGCG 3 cut(s) 237, 341, 1462
BstH2I RGCGCY 1 cut(s) 333
BstHHI GCGC 2 cut(s) 332, 343
BstKTI GATC 3 cut(s) 447, 488, 1180
BstMAI GTCTC 6 cut(s) 64, 139, 532, 696, 939, 1003
BstMBI GATC 3 cut(s) 444, 485, 1177
BstMWI GCNNNNNNNGC 6 cut(s) 72, 221, 329, 338, 572, 1436
BstNI CCWGG 4 cut(s) 428, 440, 758, 1081
BstSCI CCNGG 6 cut(s) 417, 426, 438, 491, 756, 1079
BstSFI CTRYAG 1 cut(s) 790
BstSNI TACGTA 1 cut(s) 1526
BstUI CGCG 3 cut(s) 237, 341, 1462
BstV1I GCAGC 3 cut(s) 333, 387, 1118
BstV2I GAAGAC 3 cut(s) 232, 894, 1134
BstX2I RGATCY 2 cut(s) 485, 1177
BstXI CCANNNNNNTGG 1 cut(s) 1379
BstYI RGATCY 2 cut(s) 485, 1177
BsuRI GGCC 4 cut(s) 438, 518, 756, 1371
BtgI CCRYGG 2 cut(s) 736, 1245
BtsCI GGATG 3 cut(s) 231, 766, 1255
BtsIMutI CAGTG 4 cut(s) 609, 876, 886, 1217
BveI ACCTGC 2 cut(s) 358, 634
Cac8I GCNNGC 7 cut(s) 313, 328, 387, 743, 977, 981, 1028
CfoI GCGC 2 cut(s) 332, 343
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 4 cut(s) 38, 436, 516, 1369
CseI GACGC 5 cut(s) 226, 263, 329, 811, 1512
Csp6I GTAC 3 cut(s) 393, 848, 1523
CviAII CATG 3 cut(s) 1226, 1246, 1295
CviQI GTAC 3 cut(s) 393, 848, 1523
DdeI CTNAG 3 cut(s) 482, 529, 1059
DinI GGCGCC 1 cut(s) 331
DpnI GATC 3 cut(s) 446, 487, 1179
DpnII GATC 3 cut(s) 444, 485, 1177
EaeI YGGCCR 1 cut(s) 754
Eam1104I CTCTTC 5 cut(s) 26, 128, 197, 531, 584
EarI CTCTTC 5 cut(s) 26, 128, 197, 531, 584
EciI GGCGGA 1 cut(s) 927
Ecl136II GAGCTC 1 cut(s) 424
Eco105I TACGTA 1 cut(s) 1526
Eco130I CCWWGG 1 cut(s) 1245
Eco24I GRGCYC 1 cut(s) 426
Eco31I GGTCTC 1 cut(s) 532
Eco47I GGWCC 1 cut(s) 38
Eco53kI GAGCTC 1 cut(s) 424
Eco57I CTGAAG 1 cut(s) 621
Eco72I CACGTG 1 cut(s) 1520
Eco88I CYCGRG 2 cut(s) 461, 693
EcoICRI GAGCTC 1 cut(s) 424
EcoRII CCWGG 4 cut(s) 426, 438, 756, 1079
EcoT14I CCWWGG 1 cut(s) 1245
EcoT38I GRGCYC 1 cut(s) 426
EgeI GGCGCC 1 cut(s) 331
EheI GGCGCC 1 cut(s) 331
ErhI CCWWGG 1 cut(s) 1245
Esp3I CGTCTC 2 cut(s) 139, 696
FaeI CATG 3 cut(s) 1229, 1249, 1298
FalI AAGNNNNNCTT 2 cut(s) 389, 421
FaqI GGGAC 1 cut(s) 1151
FatI CATG 3 cut(s) 1225, 1245, 1294
FauI CCCGC 3 cut(s) 236, 287, 298
FblI GTMKAC 1 cut(s) 1114
Fnu4HI GCNGC 9 cut(s) 213, 309, 324, 344, 347, 401, 746, 765, 1107
FokI GGATG 3 cut(s) 218, 773, 1262
FriOI GRGCYC 1 cut(s) 426
Fsp4HI GCNGC 9 cut(s) 213, 309, 324, 344, 347, 401, 746, 765, 1107
FspBI CTAG 5 cut(s) 819, 852, 896, 908, 1235
GlaI GCGC 2 cut(s) 331, 342
GluI GCNGC 9 cut(s) 213, 309, 324, 344, 347, 401, 746, 765, 1107
GsuI CTGGAG 1 cut(s) 410
HaeII RGCGCY 1 cut(s) 333
HaeIII GGCC 4 cut(s) 438, 518, 756, 1371
HapII CCGG 3 cut(s) 327, 419, 492
HgaI GACGC 5 cut(s) 226, 263, 329, 811, 1512
HhaI GCGC 2 cut(s) 332, 343
Hin1I GRCGYC 4 cut(s) 255, 321, 330, 803
Hin1II CATG 3 cut(s) 1229, 1249, 1298
Hin6I GCGC 2 cut(s) 330, 341
HinP1I GCGC 2 cut(s) 330, 341
HincII GTYRAC 1 cut(s) 12
HindII GTYRAC 1 cut(s) 12
HindIII AAGCTT 1 cut(s) 455
HinfI GANTC 9 cut(s) 182, 464, 773, 815, 829, 1172, 1239, 1303, 1388
HpaII CCGG 3 cut(s) 327, 419, 492
HphI GGTGA 6 cut(s) 163, 199, 545, 571, 716, 830
Hpy166II GTNNAC 5 cut(s) 12, 41, 838, 1115, 1523
Hpy188I TCNGA 7 cut(s) 181, 485, 581, 814, 925, 1060, 1177
Hpy188III TCNNGA 4 cut(s) 461, 693, 819, 1015
Hpy8I GTNNAC 5 cut(s) 12, 41, 838, 1115, 1523
Hpy99I CGWCG 3 cut(s) 257, 323, 805
HpyAV CCTTC 3 cut(s) 127, 313, 469
HpyCH4III ACNGT 5 cut(s) 871, 1124, 1221, 1232, 1473
HpyCH4IV ACGT 3 cut(s) 1397, 1519, 1525
HpyCH4V TGCA 9 cut(s) 643, 679, 930, 979, 990, 1225, 1271, 1415, 1456
HpyF10VI GCNNNNNNNGC 6 cut(s) 72, 221, 329, 338, 572, 1436
HpyF3I CTNAG 3 cut(s) 482, 529, 1059
HpySE526I ACGT 3 cut(s) 1397, 1519, 1525
Hsp92I GRCGYC 4 cut(s) 255, 321, 330, 803
Hsp92II CATG 3 cut(s) 1229, 1249, 1298
HspAI GCGC 2 cut(s) 330, 341
KasI GGCGCC 1 cut(s) 329
KroI GCCGGC 1 cut(s) 326
KroNI GCCGGC 1 cut(s) 328
Kzo9I GATC 3 cut(s) 444, 485, 1177
LguI GCTCTTC 1 cut(s) 531
LmnI GCTCC 5 cut(s) 156, 268, 354, 421, 429
Lsp1109I GCAGC 3 cut(s) 333, 387, 1118
LweI GCATC 2 cut(s) 240, 751
MaeI CTAG 5 cut(s) 819, 852, 896, 908, 1235
MaeII ACGT 3 cut(s) 1397, 1519, 1525
MaeIII GTNAC 3 cut(s) 646, 715, 1393
MalI GATC 3 cut(s) 446, 487, 1179
MbiI CCGCTC 2 cut(s) 263, 282
MboI GATC 3 cut(s) 444, 485, 1177
MfeI CAATTG 1 cut(s) 993
MflI RGATCY 2 cut(s) 485, 1177
MhlI GDGCHC 2 cut(s) 426, 483
MlsI TGGCCA 1 cut(s) 756
MluCI AATT 6 cut(s) 167, 568, 704, 749, 993, 1032
MluNI TGGCCA 1 cut(s) 756
Mly113I GGCGCC 1 cut(s) 330
MlyI GAGTC 3 cut(s) 473, 1297, 1397
MmeI TCCRAC 3 cut(s) 1080, 1243, 1360
Mox20I TGGCCA 1 cut(s) 756
MreI CGCCGGCG 1 cut(s) 326
MroNI GCCGGC 1 cut(s) 326
MroXI GAANNNNTTC 2 cut(s) 891, 919
MscI TGGCCA 1 cut(s) 756
MseI TTAA 3 cut(s) 953, 1424, 1475
Msp20I TGGCCA 1 cut(s) 756
MspA1I CMGCKG 2 cut(s) 346, 1109
MspI CCGG 3 cut(s) 327, 419, 492
MspR9I CCNGG 6 cut(s) 419, 428, 440, 493, 758, 1081
MunI CAATTG 1 cut(s) 993
Mva1269I GAATGC 2 cut(s) 880, 932
MvaI CCWGG 4 cut(s) 428, 440, 758, 1081
MvnI CGCG 3 cut(s) 237, 341, 1462
MwoI GCNNNNNNNGC 6 cut(s) 72, 221, 329, 338, 572, 1436
NaeI GCCGGC 1 cut(s) 328
NarI GGCGCC 1 cut(s) 330
NciI CCSGG 2 cut(s) 419, 493
NcoI CCATGG 1 cut(s) 1245
NdeII GATC 3 cut(s) 444, 485, 1177
NgoMIV GCCGGC 1 cut(s) 326
NlaIII CATG 3 cut(s) 1229, 1249, 1298
NlaIV GGNNCC 4 cut(s) 331, 372, 984, 1338
NmeAIII GCCGAG 1 cut(s) 475
NmuCI GTSAC 1 cut(s) 1393
PaeR7I CTCGAG 2 cut(s) 461, 693
PaqCI CACCTGC 1 cut(s) 358
PasI CCCWGGG 1 cut(s) 1080
PciSI GCTCTTC 1 cut(s) 531
PcsI WCGNNNNNNNCGW 1 cut(s) 371
PctI GAATGC 2 cut(s) 880, 932
PdiI GCCGGC 1 cut(s) 328
PdmI GAANNNNTTC 2 cut(s) 891, 919
PfeI GAWTC 6 cut(s) 182, 773, 815, 829, 1172, 1239
PflMI CCANNNNNTGG 1 cut(s) 433
PfoI TCCNGGA 1 cut(s) 426
PkrI GCNGC 9 cut(s) 214, 310, 325, 345, 348, 402, 747, 766, 1108
PleI GAGTC 3 cut(s) 472, 1297, 1396
PluTI GGCGCC 1 cut(s) 333
PmaCI CACGTG 1 cut(s) 1520
PmlI CACGTG 1 cut(s) 1520
PpsI GAGTC 3 cut(s) 472, 1297, 1396
Ppu21I YACGTR 3 cut(s) 1398, 1520, 1526
Psp124BI GAGCTC 1 cut(s) 426
Psp6I CCWGG 4 cut(s) 426, 438, 756, 1079
PspCI CACGTG 1 cut(s) 1520
PspGI CCWGG 4 cut(s) 426, 438, 756, 1079
PspN4I GGNNCC 4 cut(s) 331, 372, 984, 1338
PspPI GGNCC 4 cut(s) 38, 436, 516, 1369
PsuI RGATCY 2 cut(s) 485, 1177
PvuII CAGCTG 1 cut(s) 1109
RsaI GTAC 3 cut(s) 394, 849, 1524
RsaNI GTAC 3 cut(s) 393, 848, 1523
SacI GAGCTC 1 cut(s) 426
SapI GCTCTTC 1 cut(s) 531
SaqAI TTAA 3 cut(s) 953, 1424, 1475
SatI GCNGC 9 cut(s) 213, 309, 324, 344, 347, 401, 746, 765, 1107
Sau3AI GATC 3 cut(s) 444, 485, 1177
Sau96I GGNCC 4 cut(s) 38, 436, 516, 1369
SchI GAGTC 3 cut(s) 473, 1297, 1397
ScrFI CCNGG 6 cut(s) 419, 428, 440, 493, 758, 1081
SduI GDGCHC 2 cut(s) 426, 483
SfaNI GCATC 2 cut(s) 240, 751
SfcI CTRYAG 1 cut(s) 790
SfoI GGCGCC 1 cut(s) 331
Sfr274I CTCGAG 2 cut(s) 461, 693
SgrAI CRCCGGYG 1 cut(s) 326
SinI GGWCC 1 cut(s) 38
SlaI CTCGAG 2 cut(s) 461, 693
SmlI CTYRAG 4 cut(s) 146, 461, 693, 936
SmoI CTYRAG 4 cut(s) 146, 461, 693, 936
SnaBI TACGTA 1 cut(s) 1526
Sse9I AATT 6 cut(s) 167, 568, 704, 749, 993, 1032
SspDI GGCGCC 1 cut(s) 329
SspI AATATT 3 cut(s) 1162, 1190, 1288
SspMI CTAG 5 cut(s) 819, 852, 896, 908, 1235
SstI GAGCTC 1 cut(s) 426
StyD4I CCNGG 6 cut(s) 417, 426, 438, 491, 756, 1079
StyI CCWWGG 1 cut(s) 1245
TaaI ACNGT 5 cut(s) 871, 1124, 1221, 1232, 1473
TaiI ACGT 3 cut(s) 1400, 1522, 1528
TaqI TCGA 6 cut(s) 29, 252, 462, 694, 800, 1014
TasI AATT 6 cut(s) 167, 568, 704, 749, 993, 1032
TauI GCSGC 6 cut(s) 215, 311, 326, 346, 748, 767
TfiI GAWTC 6 cut(s) 182, 773, 815, 829, 1172, 1239
Tru1I TTAA 3 cut(s) 953, 1424, 1475
Tru9I TTAA 3 cut(s) 953, 1424, 1475
TscAI CASTG 4 cut(s) 616, 876, 886, 1224
TseFI GTSAC 1 cut(s) 1393
TseI GCWGC 3 cut(s) 346, 400, 1106
Tsp45I GTSAC 1 cut(s) 1393
TspDTI ATGAA 4 cut(s) 392, 798, 900, 1306
TspGWI ACGGA 1 cut(s) 678
TspRI CASTG 4 cut(s) 616, 876, 886, 1224
Van91I CCANNNNNTGG 1 cut(s) 433
VpaK11BI GGWCC 1 cut(s) 38
XapI RAATTY 1 cut(s) 167
XbaI TCTAGA 1 cut(s) 818
XhoI CTCGAG 2 cut(s) 461, 693
XmiI GTMKAC 1 cut(s) 1114
XmnI GAANNNNTTC 2 cut(s) 891, 919
XspI CTAG 5 cut(s) 819, 852, 896, 908, 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.