RLG00000034644

Belongs to the GDA1 CD39 NTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0014823
Physical Location & Seq
Forward (+)
47007331 .. 47016521
9191 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034644

Sequence Viewer

Length: 1674 bp
ATGGATTTGTCAACCCTCCAAATCCAATCGAAGAGAGCTCCACCACCACCAGTCTCTCGCAACAATCGCCAATGCCTCCTCATCTCCTGCCTCTCTCTCCTCGCCCTCCCCTTCCTCTTCTACCTTGTCTCCACCGCCCACAAGCTCCACCTCTCCCCCAAATTCACCCACTCCGAATCCACCCTCTTCGGCATTGTCATCACCGCCGCCCCCACCGCCTCCCGCATCCGCGTCTTCCATTTCCTCGACGCCACCGCCACCGCCCCCTCCACCTCCTCCCGCTCTGGCCCCGCCCTCTCCTCCTTCGCCTCCCGCCCCGACGCCGCCGGCGCCTCCCTCGCGCCGCTGCTCCGCTTCGCCAAGTCGCAGGTGCCGATGAAAGAGCGAGCCAGTACGAAGCTGCTCTTGTTTGCTTCCCCGGAGCTCCAGGACTTGGGCCAGGAGATCGCCGAGAAGCTTCTCGAGTCGTGTAGGAAGGTGCTCAGATCTTCCGGGTTTTGGTTCAAGGACGATTGGGCCAGAGTGATCTCAGGTGAAGAGCAAGGGGTTTATGCTTGGGTGAGTGCCAATTACGCTCTCGGAACATTGAAGAGTGAGGCTGAAGAAACCACTGGGATAGTTGAACTCGGTGGGGCTTCTTTGCAGGTTACATTTGCCCAAAAAGAAACACTCCAAGTGCAATCTTCTCCGTCTCGAGTTATCAAATTGTTTGGAGTTACTTATCACCTTCATAGCCACGGCTTGCCGCAATTTGGCCAGGATGCAGCTTGGGAATCATTGTATGAAAACTACAGAAAATCGACGCCTTTTTCAGATTCTAGAAAGGGGAGTCTTGTTAACCCTTGTGTACCTAGAGGATATAAGCTGACAGTGAATGCCAGTGATGAACAACTTCTAGTGTCTTCGCTGGGCGGAAACTTTTCTGAATGCAAGTCTCAAGTTTTGGCACTATTAAAGAGCAAACAAGATAAATGCGTGCAGGCACCTTGCAAAATTGTCTCATCATTTCCTTTCGAGATAGGGGGCAAGCCAATTTCCACAAACTTCTTATTTACTTCTGAGCTTTTTGGGCTTGTTCCCAGGGCTTCTTTGTTTGAGTTGGAGGCAGCTGGTCTACAATACTGTGAAGATGAGTGGGACAAACAGAAAAATCAACATAATATTGTTGATGATTCAGATCTGCTGAAATATTGTTTCTCATCTGCTTATATGGTGGCGCTGTTGCATGACAGTCTAGGAATCCCCATGGATGAGAAAAGGGTTGGATTTGCAAACCAGACTGGAAATATTCTCCATGATTGGACTCTCGGTGCTTTCATTGTTGAAACAATGCTGGAACCCCTTGAATGGGAACTCGACAATAATCTGGGCCAGATTGTTGGAAATGAGTCTGTCACGTATTTCTCTGTCTTTGCATTTCTTTTAATAGCTGTGTTTGCTGTATTCTTTGTATTGCAATCGCGGAAACCACAGTTAAAGACTATATACGATTTAGAAAAAGGACGCTATATTATTACACGTGTACCTAGGGTAGTGATCCCTCATGATCATGAGACAAATTCTCCCATCATTTCAAGATATGGGGACTGTCTTACCTTATTAAAGTTTGTAAATATACCTACCGATTCTTTTGTCCTGTGGGTGATGAGACAGTTTGGTATGACTGGATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko05169 map00230 map00240 map05169
Pfam Domains
Protein Families
GDA1_CD39

Protein Analysis

558

Amino Acids

61.78

Weight (kDa)

6.87

Isoelectric Point (pI)

43.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 56 - 448 2.4e-57 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014823)

Species Orthologous Gene IDs
malus_domestica MD11G1180600.v1.1
prunus_persica Prupe.6G153100_v2.0.a1
pyrus_communis pycom11g15580
rosa_chinensis RchiOBHm_Chr5g0049751
rosa_laevigata RLG00000034644
rosa_multiflora Rmu_sc0016686.1_g000002 Rmu_sc0020783.1_g000001
rosa_roxburghii Rroxscaffold_1G00031680
rosa_rugosa Rorug05G0250800 Rorug05G0250800 Rorug05G0250900
rosa_samantha Rh5AG326900 Rh5BG338000 Rh5CG362600 Rh5DG350200
rosa_wichuraiana Rw0G018430 Rw5G030880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 358
Acc36I ACCTGC 2 cut(s) 358, 634
AccB1I GGYRCC 3 cut(s) 329, 370, 982
AccB7I CCANNNNNTGG 1 cut(s) 433
AccBSI CCGCTC 1 cut(s) 282
AccI GTMKAC 1 cut(s) 1114
AccII CGCG 3 cut(s) 231, 341, 1462
AclWI GGATC 1 cut(s) 1531
AcoI YGGCCR 1 cut(s) 754
AcsI RAATTY 2 cut(s) 161, 1558
AcuI CTGAAG 1 cut(s) 621
AcvI CACGTG 1 cut(s) 1520
AcyI GRCGYC 4 cut(s) 249, 321, 330, 803
AfaI GTAC 3 cut(s) 394, 849, 1524
AfiI CCNNNNNNNGG 5 cut(s) 433, 498, 752, 1347, 1348
AflIII ACRYGT 2 cut(s) 1517, 1519
AgsI TTSAA 6 cut(s) 505, 589, 623, 1325, 1346, 1575
AjnI CCWGG 4 cut(s) 426, 438, 756, 1079
Alw21I GWGCWC 3 cut(s) 40, 426, 483
Alw26I GTCTC 7 cut(s) 58, 133, 696, 939, 1003, 1547, 1642
AlwI GGATC 1 cut(s) 1531
Ama87I CYCGRG 2 cut(s) 461, 693
AoxI GGCC 5 cut(s) 286, 436, 516, 754, 1369
ApeKI GCWGC 4 cut(s) 346, 400, 764, 1106
ApoI RAATTY 2 cut(s) 161, 1558
Asp700I GAANNNNTTC 2 cut(s) 891, 919
AspA2I CCTAGG 1 cut(s) 1526
AspLEI GCGC 3 cut(s) 332, 343, 1219
AspS9I GGNCC 4 cut(s) 287, 436, 516, 1369
AsuC2I CCSGG 2 cut(s) 419, 493
AsuHPI GGTGA 6 cut(s) 157, 193, 545, 571, 716, 1654
AvaI CYCGRG 2 cut(s) 461, 693
AvrII CCTAGG 1 cut(s) 1526
BaeI ACNNNNGTAYC 2 cut(s) 1506, 1539
BalI TGGCCA 1 cut(s) 756
BanI GGYRCC 3 cut(s) 329, 370, 982
BanII GRGCYC 2 cut(s) 40, 426
BbrPI CACGTG 1 cut(s) 1520
BbsI GAAGAC 2 cut(s) 226, 894
Bbv12I GWGCWC 3 cut(s) 40, 426, 483
BbvI GCAGC 4 cut(s) 333, 387, 776, 1118
BccI CCATC 1 cut(s) 1574
BceAI ACGGC 1 cut(s) 754
BciT130I CCWGG 4 cut(s) 428, 440, 758, 1081
BclI TGATCA 1 cut(s) 1546
BcnI CCSGG 2 cut(s) 419, 493
BcoDI GTCTC 7 cut(s) 58, 133, 696, 939, 1003, 1547, 1642
BfaI CTAG 5 cut(s) 819, 852, 896, 1235, 1527
BfmI CTRYAG 1 cut(s) 790
BfoI RGCGCY 2 cut(s) 333, 1220
BfuAI ACCTGC 2 cut(s) 358, 634
BglII AGATCT 2 cut(s) 485, 1177
BisI GCNGC 8 cut(s) 207, 324, 344, 347, 401, 746, 765, 1107
BlnI CCTAGG 1 cut(s) 1526
BlsI GCNGC 8 cut(s) 208, 325, 345, 348, 402, 747, 766, 1108
Bme1390I CCNGG 6 cut(s) 419, 428, 440, 493, 758, 1081
BmeT110I CYCGRG 2 cut(s) 461, 693
BmgT120I GGNCC 4 cut(s) 287, 436, 516, 1369
BmiI GGNNCC 5 cut(s) 289, 331, 372, 984, 1338
BmrFI CCNGG 6 cut(s) 419, 428, 440, 493, 758, 1081
BmrI ACTGGG 1 cut(s) 621
BmsI GCATC 2 cut(s) 234, 751
BmuI ACTGGG 1 cut(s) 621
BpiI GAAGAC 2 cut(s) 226, 894
BpmI CTGGAG 1 cut(s) 410
BpuEI CTTGAG 1 cut(s) 921
BpuMI CCSGG 2 cut(s) 419, 493
BsaAI YACGTR 2 cut(s) 1398, 1520
BsaBI GATNNNNATC 1 cut(s) 1176
BsaHI GRCGYC 4 cut(s) 249, 321, 330, 803
BsaJI CCNNGG 6 cut(s) 417, 736, 1079, 1080, 1245, 1526
BsaXI ACNNNNNCTCC 4 cut(s) 113, 143, 1546, 1576
Bsc4I CCNNNNNNNGG 5 cut(s) 433, 498, 752, 1347, 1348
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 6 cut(s) 50, 390, 616, 879, 1285, 1669
Bse8I GATNNNNATC 1 cut(s) 1176
BseBI CCWGG 4 cut(s) 428, 440, 758, 1081
BseDI CCNNGG 6 cut(s) 417, 736, 1079, 1080, 1245, 1526
BseGI GGATG 3 cut(s) 225, 766, 1255
BseJI GATNNNNATC 1 cut(s) 1176
BseLI CCNNNNNNNGG 5 cut(s) 433, 498, 752, 1347, 1348
BseMII CTCAG 3 cut(s) 496, 543, 1050
BseNI ACTGG 6 cut(s) 50, 390, 616, 879, 1285, 1669
BseRI GAGGAG 4 cut(s) 68, 89, 265, 289
BseXI GCAGC 4 cut(s) 333, 387, 776, 1118
BseYI CCCAGC 1 cut(s) 907
BsgI GTGCAG 1 cut(s) 998
Bsh1236I CGCG 3 cut(s) 231, 341, 1462
BshFI GGCC 5 cut(s) 288, 438, 518, 756, 1371
BshNI GGYRCC 3 cut(s) 329, 370, 982
BsiHKAI GWGCWC 3 cut(s) 40, 426, 483
BsiHKCI CYCGRG 2 cut(s) 461, 693
BsiSI CCGG 3 cut(s) 327, 419, 492
BslFI GGGAC 2 cut(s) 1151, 1598
BslI CCNNNNNNNGG 5 cut(s) 433, 498, 752, 1347, 1348
BsmAI GTCTC 7 cut(s) 58, 133, 696, 939, 1003, 1547, 1642
BsmBI CGTCTC 1 cut(s) 696
BsmFI GGGAC 2 cut(s) 1151, 1598
BsmI GAATGC 2 cut(s) 880, 932
BsnI GGCC 5 cut(s) 288, 438, 518, 756, 1371
BsoBI CYCGRG 2 cut(s) 461, 693
Bsp1286I GDGCHC 3 cut(s) 40, 426, 483
Bsp143I GATC 7 cut(s) 444, 485, 525, 1177, 1536, 1546, 1667
Bsp19I CCATGG 1 cut(s) 1245
BspANI GGCC 5 cut(s) 288, 438, 518, 756, 1371
BspCNI CTCAG 3 cut(s) 495, 542, 1051
BspFNI CGCG 3 cut(s) 231, 341, 1462
BspHI TCATGA 2 cut(s) 1543, 1549
BspLI GGNNCC 5 cut(s) 289, 331, 372, 984, 1338
BspMI ACCTGC 2 cut(s) 358, 634
BspPI GGATC 1 cut(s) 1531
BspQI GCTCTTC 1 cut(s) 531
BspT107I GGYRCC 3 cut(s) 329, 370, 982
BsrBI CCGCTC 1 cut(s) 282
BsrFI RCCGGY 1 cut(s) 326
BsrI ACTGG 6 cut(s) 50, 390, 616, 879, 1285, 1669
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 6 cut(s) 417, 736, 1079, 1080, 1245, 1526
BssMI GATC 7 cut(s) 444, 485, 525, 1177, 1536, 1546, 1667
BssNI GRCGYC 4 cut(s) 249, 321, 330, 803
BssT1I CCWWGG 2 cut(s) 1245, 1526
Bst2UI CCWGG 4 cut(s) 428, 440, 758, 1081
Bst4CI ACNGT 6 cut(s) 871, 1124, 1232, 1473, 1589, 1653
Bst6I CTCTTC 5 cut(s) 26, 122, 191, 531, 584
BstACI GRCGYC 4 cut(s) 249, 321, 330, 803
BstBAI YACGTR 2 cut(s) 1398, 1520
BstC8I GCNNGC 6 cut(s) 328, 387, 743, 977, 981, 1028
BstDEI CTNAG 3 cut(s) 482, 529, 1059
BstDSI CCRYGG 2 cut(s) 736, 1245
BstF5I GGATG 3 cut(s) 225, 766, 1255
BstFNI CGCG 3 cut(s) 231, 341, 1462
BstH2I RGCGCY 2 cut(s) 333, 1220
BstHHI GCGC 3 cut(s) 332, 343, 1219
BstKTI GATC 7 cut(s) 447, 488, 528, 1180, 1539, 1549, 1670
BstMAI GTCTC 7 cut(s) 58, 133, 696, 939, 1003, 1547, 1642
BstMBI GATC 7 cut(s) 444, 485, 525, 1177, 1536, 1546, 1667
BstMWI GCNNNNNNNGC 7 cut(s) 66, 215, 329, 338, 572, 1069, 1436
BstNI CCWGG 4 cut(s) 428, 440, 758, 1081
BstSCI CCNGG 6 cut(s) 417, 426, 438, 491, 756, 1079
BstSFI CTRYAG 1 cut(s) 790
BstUI CGCG 3 cut(s) 231, 341, 1462
BstV1I GCAGC 4 cut(s) 333, 387, 776, 1118
BstV2I GAAGAC 2 cut(s) 226, 894
BstX2I RGATCY 2 cut(s) 485, 1177
BstXI CCANNNNNNTGG 1 cut(s) 1379
BstYI RGATCY 2 cut(s) 485, 1177
BsuRI GGCC 5 cut(s) 288, 438, 518, 756, 1371
BtgI CCRYGG 2 cut(s) 736, 1245
BtsCI GGATG 3 cut(s) 225, 766, 1255
BtsIMutI CAGTG 3 cut(s) 609, 876, 886
BveI ACCTGC 2 cut(s) 358, 634
Cac8I GCNNGC 6 cut(s) 328, 387, 743, 977, 981, 1028
CciI TCATGA 2 cut(s) 1543, 1549
CfoI GCGC 3 cut(s) 332, 343, 1219
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 4 cut(s) 287, 436, 516, 1369
CseI GACGC 5 cut(s) 220, 257, 329, 811, 1512
Csp6I GTAC 3 cut(s) 393, 848, 1523
CviAII CATG 5 cut(s) 1226, 1246, 1295, 1544, 1550
CviQI GTAC 3 cut(s) 393, 848, 1523
DdeI CTNAG 3 cut(s) 482, 529, 1059
DinI GGCGCC 1 cut(s) 331
DpnI GATC 7 cut(s) 446, 487, 527, 1179, 1538, 1548, 1669
DpnII GATC 7 cut(s) 444, 485, 525, 1177, 1536, 1546, 1667
EaeI YGGCCR 1 cut(s) 754
Eam1104I CTCTTC 5 cut(s) 26, 122, 191, 531, 584
EarI CTCTTC 5 cut(s) 26, 122, 191, 531, 584
EciI GGCGGA 1 cut(s) 927
Ecl136II GAGCTC 2 cut(s) 38, 424
Eco130I CCWWGG 2 cut(s) 1245, 1526
Eco24I GRGCYC 2 cut(s) 40, 426
Eco53kI GAGCTC 2 cut(s) 38, 424
Eco57I CTGAAG 1 cut(s) 621
Eco72I CACGTG 1 cut(s) 1520
Eco88I CYCGRG 2 cut(s) 461, 693
EcoICRI GAGCTC 2 cut(s) 38, 424
EcoRII CCWGG 4 cut(s) 426, 438, 756, 1079
EcoT14I CCWWGG 2 cut(s) 1245, 1526
EcoT38I GRGCYC 2 cut(s) 40, 426
EgeI GGCGCC 1 cut(s) 331
EheI GGCGCC 1 cut(s) 331
ErhI CCWWGG 2 cut(s) 1245, 1526
Esp3I CGTCTC 1 cut(s) 696
FaeI CATG 5 cut(s) 1229, 1249, 1298, 1547, 1553
FalI AAGNNNNNCTT 2 cut(s) 389, 421
FaqI GGGAC 2 cut(s) 1151, 1598
FatI CATG 5 cut(s) 1225, 1245, 1294, 1543, 1549
FauI CCCGC 4 cut(s) 230, 287, 298, 320
FbaI TGATCA 1 cut(s) 1546
FblI GTMKAC 1 cut(s) 1114
Fnu4HI GCNGC 8 cut(s) 207, 324, 344, 347, 401, 746, 765, 1107
FokI GGATG 3 cut(s) 212, 773, 1262
FriOI GRGCYC 2 cut(s) 40, 426
Fsp4HI GCNGC 8 cut(s) 207, 324, 344, 347, 401, 746, 765, 1107
FspBI CTAG 5 cut(s) 819, 852, 896, 1235, 1527
GlaI GCGC 3 cut(s) 331, 342, 1218
GluI GCNGC 8 cut(s) 207, 324, 344, 347, 401, 746, 765, 1107
GsaI CCCAGC 1 cut(s) 911
GsuI CTGGAG 1 cut(s) 410
HaeII RGCGCY 2 cut(s) 333, 1220
HaeIII GGCC 5 cut(s) 288, 438, 518, 756, 1371
HapII CCGG 3 cut(s) 327, 419, 492
HgaI GACGC 5 cut(s) 220, 257, 329, 811, 1512
HhaI GCGC 3 cut(s) 332, 343, 1219
Hin1I GRCGYC 4 cut(s) 249, 321, 330, 803
Hin1II CATG 5 cut(s) 1229, 1249, 1298, 1547, 1553
Hin6I GCGC 3 cut(s) 330, 341, 1217
HinP1I GCGC 3 cut(s) 330, 341, 1217
HincII GTYRAC 2 cut(s) 12, 838
HindII GTYRAC 2 cut(s) 12, 838
HindIII AAGCTT 1 cut(s) 455
HpaI GTTAAC 1 cut(s) 838
HpaII CCGG 3 cut(s) 327, 419, 492
HphI GGTGA 6 cut(s) 157, 193, 545, 571, 716, 1654
Hpy166II GTNNAC 5 cut(s) 12, 838, 848, 1115, 1523
Hpy188I TCNGA 7 cut(s) 175, 485, 581, 814, 925, 1060, 1177
Hpy188III TCNNGA 7 cut(s) 461, 693, 819, 1015, 1544, 1550, 1575
Hpy8I GTNNAC 5 cut(s) 12, 838, 848, 1115, 1523
Hpy99I CGWCG 3 cut(s) 251, 323, 805
HpyAV CCTTC 4 cut(s) 121, 313, 469, 737
HpyCH4III ACNGT 6 cut(s) 871, 1124, 1232, 1473, 1589, 1653
HpyCH4IV ACGT 2 cut(s) 1397, 1519
HpyF10VI GCNNNNNNNGC 7 cut(s) 66, 215, 329, 338, 572, 1069, 1436
HpyF3I CTNAG 3 cut(s) 482, 529, 1059
HpySE526I ACGT 2 cut(s) 1397, 1519
Hsp92I GRCGYC 4 cut(s) 249, 321, 330, 803
Hsp92II CATG 5 cut(s) 1229, 1249, 1298, 1547, 1553
HspAI GCGC 3 cut(s) 330, 341, 1217
KasI GGCGCC 1 cut(s) 329
KroI GCCGGC 1 cut(s) 326
KroNI GCCGGC 1 cut(s) 328
Ksp22I TGATCA 1 cut(s) 1546
KspAI GTTAAC 1 cut(s) 838
Kzo9I GATC 7 cut(s) 444, 485, 525, 1177, 1536, 1546, 1667
LguI GCTCTTC 1 cut(s) 531
LmnI GCTCC 5 cut(s) 43, 150, 354, 421, 429
Lsp1109I GCAGC 4 cut(s) 333, 387, 776, 1118
LweI GCATC 2 cut(s) 234, 751
MaeI CTAG 5 cut(s) 819, 852, 896, 1235, 1527
MaeII ACGT 2 cut(s) 1397, 1519
MaeIII GTNAC 3 cut(s) 646, 715, 1393
MalI GATC 7 cut(s) 446, 487, 527, 1179, 1538, 1548, 1669
MbiI CCGCTC 1 cut(s) 282
MboI GATC 7 cut(s) 444, 485, 525, 1177, 1536, 1546, 1667
MflI RGATCY 2 cut(s) 485, 1177
MhlI GDGCHC 3 cut(s) 40, 426, 483
MlsI TGGCCA 1 cut(s) 756
MluCI AATT 7 cut(s) 161, 568, 704, 749, 993, 1032, 1558
MluNI TGGCCA 1 cut(s) 756
Mly113I GGCGCC 1 cut(s) 330
MlyI GAGTC 4 cut(s) 473, 838, 1297, 1397
MmeI TCCRAC 3 cut(s) 1080, 1243, 1360
Mox20I TGGCCA 1 cut(s) 756
MreI CGCCGGCG 1 cut(s) 326
MroNI GCCGGC 1 cut(s) 326
MroXI GAANNNNTTC 2 cut(s) 891, 919
MscI TGGCCA 1 cut(s) 756
MseI TTAA 5 cut(s) 837, 953, 1424, 1475, 1601
MslI CAYNNNNRTG 1 cut(s) 1548
Msp20I TGGCCA 1 cut(s) 756
MspA1I CMGCKG 2 cut(s) 346, 1109
MspI CCGG 3 cut(s) 327, 419, 492
MspR9I CCNGG 6 cut(s) 419, 428, 440, 493, 758, 1081
Mva1269I GAATGC 2 cut(s) 880, 932
MvaI CCWGG 4 cut(s) 428, 440, 758, 1081
MvnI CGCG 3 cut(s) 231, 341, 1462
MwoI GCNNNNNNNGC 7 cut(s) 66, 215, 329, 338, 572, 1069, 1436
NaeI GCCGGC 1 cut(s) 328
NarI GGCGCC 1 cut(s) 330
NciI CCSGG 2 cut(s) 419, 493
NcoI CCATGG 1 cut(s) 1245
NdeII GATC 7 cut(s) 444, 485, 525, 1177, 1536, 1546, 1667
NgoMIV GCCGGC 1 cut(s) 326
NlaIII CATG 5 cut(s) 1229, 1249, 1298, 1547, 1553
NlaIV GGNNCC 5 cut(s) 289, 331, 372, 984, 1338
NmeAIII GCCGAG 1 cut(s) 475
NmuCI GTSAC 1 cut(s) 1393
PaeR7I CTCGAG 2 cut(s) 461, 693
PagI TCATGA 2 cut(s) 1543, 1549
PaqCI CACCTGC 1 cut(s) 358
PasI CCCWGGG 1 cut(s) 1080
PciSI GCTCTTC 1 cut(s) 531
PcsI WCGNNNNNNNCGW 1 cut(s) 371
PctI GAATGC 2 cut(s) 880, 932
PdiI GCCGGC 1 cut(s) 328
PdmI GAANNNNTTC 2 cut(s) 891, 919
PfeI GAWTC 6 cut(s) 176, 773, 815, 1172, 1239, 1625
PflMI CCANNNNNTGG 1 cut(s) 433
PfoI TCCNGGA 1 cut(s) 426
PkrI GCNGC 8 cut(s) 208, 325, 345, 348, 402, 747, 766, 1108
PleI GAGTC 4 cut(s) 472, 837, 1297, 1396
PluTI GGCGCC 1 cut(s) 333
PmaCI CACGTG 1 cut(s) 1520
PmlI CACGTG 1 cut(s) 1520
PpsI GAGTC 4 cut(s) 472, 837, 1297, 1396
Ppu21I YACGTR 2 cut(s) 1398, 1520
Psp124BI GAGCTC 2 cut(s) 40, 426
Psp6I CCWGG 4 cut(s) 426, 438, 756, 1079
PspCI CACGTG 1 cut(s) 1520
PspFI CCCAGC 1 cut(s) 907
PspGI CCWGG 4 cut(s) 426, 438, 756, 1079
PspN4I GGNNCC 5 cut(s) 289, 331, 372, 984, 1338
PspPI GGNCC 4 cut(s) 287, 436, 516, 1369
PsuI RGATCY 2 cut(s) 485, 1177
PvuII CAGCTG 1 cut(s) 1109
RsaI GTAC 3 cut(s) 394, 849, 1524
RsaNI GTAC 3 cut(s) 393, 848, 1523
RseI CAYNNNNRTG 1 cut(s) 1548
SacI GAGCTC 2 cut(s) 40, 426
SapI GCTCTTC 1 cut(s) 531
SaqAI TTAA 5 cut(s) 837, 953, 1424, 1475, 1601
SatI GCNGC 8 cut(s) 207, 324, 344, 347, 401, 746, 765, 1107
Sau3AI GATC 7 cut(s) 444, 485, 525, 1177, 1536, 1546, 1667
Sau96I GGNCC 4 cut(s) 287, 436, 516, 1369
SchI GAGTC 4 cut(s) 473, 838, 1297, 1397
ScrFI CCNGG 6 cut(s) 419, 428, 440, 493, 758, 1081
SduI GDGCHC 3 cut(s) 40, 426, 483
SfaNI GCATC 2 cut(s) 234, 751
SfcI CTRYAG 1 cut(s) 790
SfoI GGCGCC 1 cut(s) 331
Sfr274I CTCGAG 2 cut(s) 461, 693
SgrAI CRCCGGYG 1 cut(s) 326
SlaI CTCGAG 2 cut(s) 461, 693
SmiMI CAYNNNNRTG 1 cut(s) 1548
SmlI CTYRAG 3 cut(s) 461, 693, 936
SmoI CTYRAG 3 cut(s) 461, 693, 936
Sse9I AATT 7 cut(s) 161, 568, 704, 749, 993, 1032, 1558
SspDI GGCGCC 1 cut(s) 329
SspI AATATT 3 cut(s) 1162, 1190, 1288
SspMI CTAG 5 cut(s) 819, 852, 896, 1235, 1527
SstI GAGCTC 2 cut(s) 40, 426
StyD4I CCNGG 6 cut(s) 417, 426, 438, 491, 756, 1079
StyI CCWWGG 2 cut(s) 1245, 1526
TaaI ACNGT 6 cut(s) 871, 1124, 1232, 1473, 1589, 1653
TaiI ACGT 2 cut(s) 1400, 1522
TaqI TCGA 7 cut(s) 29, 246, 462, 694, 800, 1014, 1356
TasI AATT 7 cut(s) 161, 568, 704, 749, 993, 1032, 1558
TauI GCSGC 4 cut(s) 209, 326, 346, 748
TfiI GAWTC 6 cut(s) 176, 773, 815, 1172, 1239, 1625
Tru1I TTAA 5 cut(s) 837, 953, 1424, 1475, 1601
Tru9I TTAA 5 cut(s) 837, 953, 1424, 1475, 1601
TscAI CASTG 3 cut(s) 616, 876, 886
TseFI GTSAC 1 cut(s) 1393
TseI GCWGC 4 cut(s) 346, 400, 764, 1106
Tsp45I GTSAC 1 cut(s) 1393
TspDTI ATGAA 5 cut(s) 392, 719, 798, 900, 1306
TspGWI ACGGA 1 cut(s) 678
TspRI CASTG 3 cut(s) 616, 876, 886
Van91I CCANNNNNTGG 1 cut(s) 433
XapI RAATTY 2 cut(s) 161, 1558
XbaI TCTAGA 1 cut(s) 818
XhoI CTCGAG 2 cut(s) 461, 693
XmaJI CCTAGG 1 cut(s) 1526
XmiI GTMKAC 1 cut(s) 1114
XmnI GAANNNNTTC 2 cut(s) 891, 919
XspI CTAG 5 cut(s) 819, 852, 896, 1235, 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.