Rw0G018430

Belongs to the GDA1 CD39 NTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00823
OG0014823
Physical Location & Seq
Reverse (-)
47099 .. 55464
8366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G018430.1

Sequence Viewer

Length: 1527 bp
ATGGATTTGTCAACCCTCCAAATCCAATCGAAGAGAGCTCCACCAGCACCAGTCTCTCGCAACAATCGCCAATGCCTCCTCATCTCCTGCCTCTCTCTCCTCGCCCTCCCCTTCCTCTTCTACCTCGTCTCCACCGCCCTCAAGCTCCACCTCTCCCCCAAATTCACCCACTCCGAATCCACCCTCTTCGGCATTGTCATCACCGCCGCCCCCACCGCCTCCCGCATCCGCGTCTTCCATTTCCTCGACGCCACCGCTCCCTCCACCTCCTCCCGCTCTCGCCCCGCCCTCTCCTCCTTCGCCGCCCGCCCCGACGCCGCCGGAGCCTCCCTCGCGCCGCTGCTCCGCTTCGCCAAGTCGCAGGTGCCGATGAAAGAGCGAGCCAGTACGAAGCTGCTCTTGTTTGCTTCCCCGGAGCTCCAGGACTTGGGCCAGGAGATCGCCGAGAAGCTTCTCGAGTCGTGTAGGAAGGTGCTCAGATCTTCCGGGTTCTGGTTCAAGGACGATTGGGCCAGAGTGGTCTCAGGTGAAGAGCAAGGGGTTTATGCTTGGGTGAGTGCCAATTACGCTCTCGGAACATTGAAGAGTGAGGCTGAAGAAACCACTGGGATAGTTGAACTCGGTGGGGCTTCTTTGCAGGTTACATTTGCCCAAAAAGAAACACTCCAAGTGCAATCTTCTCCGTCTCGAGTTATCAAATTGTTTGGAGTTACTTATCACCTTTATAGCCACGGCTTGCCGCAATTTGGCCAGGATGCGGCTTGGGAATCATTGTATGAAAACTACAGAAAATCGACGCCTTTTTCAGATTCTAGAAAGGGGAATCTTGTTCACCCTTGCGTACCTAGAGGATATAAGCTGACAGTGAATGCCAGTGATGAACAACTTCTAGTGTCTTCGCTAGGCGGAAACTTTTCTGAATGCAAGTCTCAAGTTTTGGCACTATTAAAGAGCAAACAAGATAAATGCGTGCAGGCACCTTGCACAATTGTCTCGTCATTTCCTTTCGAGATAGGGGGCAAGCCAATTTCCGCAAACTTCTTATTTACATCTGAGATTTTTGGGCTTGTTCCCAGGGCTTCTTTGTTTGAGTTGGAGGCAGCTGGTCTACAATACTGTGAAGACGAATGGGACAAACAGAAAAATCAACATAATATTGTTGATGATTCAGATCTGCTGAAATATTGTTTCTCATCTGCTTATATGGTGGCACTGTTGCATGACAGTCTAGGAATCCCCATGGATGAGAAAAGGGTTGGATTTGCAAACCAGACTGGAAATATTCTCCATGATTGGACTCTCGGTGCTTTCATTGTTGAAACAATGCTGGAACCCCTTGAATGGGAACTTGATAATAATCTGGGCCAGATTGTTGGAAATGAGTCTGTCACGTATTTCTCTGTCTTTGCATTTCTTTTAATAGCTGTGTTTGCTGTATTCTTTGTATTGCAATCGCGGAAACCACAGTTAAAGACTATATACGATTTAGAAAAAGGACGCTATATTATTACACGTGTACGTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko05169 map00230 map00240 map05169
Pfam Domains
Protein Families
GDA1_CD39

Protein Analysis

508

Amino Acids

56.39

Weight (kDa)

7.57

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 56 - 446 1.6e-57 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014823)

Species Orthologous Gene IDs
malus_domestica MD11G1180600.v1.1
prunus_persica Prupe.6G153100_v2.0.a1
pyrus_communis pycom11g15580
rosa_chinensis RchiOBHm_Chr5g0049751
rosa_laevigata RLG00000034644
rosa_multiflora Rmu_sc0016686.1_g000002 Rmu_sc0020783.1_g000001
rosa_roxburghii Rroxscaffold_1G00031680
rosa_rugosa Rorug05G0250800 Rorug05G0250800 Rorug05G0250900
rosa_samantha Rh5AG326900 Rh5BG338000 Rh5CG362600 Rh5DG350200
rosa_wichuraiana Rw0G018430 Rw5G030880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 352
Acc36I ACCTGC 2 cut(s) 352, 628
AccB1I GGYRCC 2 cut(s) 364, 976
AccB7I CCANNNNNTGG 1 cut(s) 427
AccBSI CCGCTC 2 cut(s) 257, 276
AccI GTMKAC 1 cut(s) 1108
AccII CGCG 3 cut(s) 231, 335, 1456
AcoI YGGCCR 1 cut(s) 748
AcsI RAATTY 1 cut(s) 161
AcuI CTGAAG 1 cut(s) 615
AcvI CACGTG 1 cut(s) 1514
AcyI GRCGYC 3 cut(s) 249, 315, 797
AfaI GTAC 3 cut(s) 388, 843, 1518
AfiI CCNNNNNNNGG 6 cut(s) 427, 492, 746, 757, 1341, 1342
AflIII ACRYGT 2 cut(s) 1511, 1513
AgsI TTSAA 5 cut(s) 499, 583, 617, 1319, 1340
AjnI CCWGG 4 cut(s) 420, 432, 750, 1073
AluBI AGCT 8 cut(s) 38, 145, 394, 418, 451, 859, 1103, 1424
AluI AGCT 8 cut(s) 38, 145, 394, 418, 451, 859, 1103, 1424
Alw21I GWGCWC 3 cut(s) 40, 420, 477
Alw26I GTCTC 6 cut(s) 58, 133, 526, 690, 933, 997
Ama87I CYCGRG 2 cut(s) 455, 687
AoxI GGCC 4 cut(s) 430, 510, 748, 1363
ApeKI GCWGC 3 cut(s) 340, 394, 1100
ApoI RAATTY 1 cut(s) 161
Asp700I GAANNNNTTC 2 cut(s) 885, 913
AspLEI GCGC 1 cut(s) 337
AspS9I GGNCC 3 cut(s) 430, 510, 1363
AsuC2I CCSGG 2 cut(s) 413, 487
AsuHPI GGTGA 6 cut(s) 157, 193, 539, 565, 710, 824
AvaI CYCGRG 2 cut(s) 455, 687
BalI TGGCCA 1 cut(s) 750
BanI GGYRCC 2 cut(s) 364, 976
BanII GRGCYC 2 cut(s) 40, 420
BbrPI CACGTG 1 cut(s) 1514
BbsI GAAGAC 3 cut(s) 226, 888, 1128
Bbv12I GWGCWC 3 cut(s) 40, 420, 477
BbvI GCAGC 3 cut(s) 327, 381, 1112
BceAI ACGGC 1 cut(s) 748
BciT130I CCWGG 4 cut(s) 422, 434, 752, 1075
BcnI CCSGG 2 cut(s) 413, 487
BcoDI GTCTC 6 cut(s) 58, 133, 526, 690, 933, 997
BfaI CTAG 5 cut(s) 813, 846, 890, 902, 1229
BfmI CTRYAG 1 cut(s) 784
BfuAI ACCTGC 2 cut(s) 352, 628
BglII AGATCT 2 cut(s) 479, 1171
BisI GCNGC 9 cut(s) 207, 303, 318, 338, 341, 395, 740, 759, 1101
BlsI GCNGC 9 cut(s) 208, 304, 319, 339, 342, 396, 741, 760, 1102
Bme1390I CCNGG 6 cut(s) 413, 422, 434, 487, 752, 1075
BmeT110I CYCGRG 2 cut(s) 455, 687
BmgT120I GGNCC 3 cut(s) 430, 510, 1363
BmiI GGNNCC 4 cut(s) 325, 366, 978, 1332
BmrFI CCNGG 6 cut(s) 413, 422, 434, 487, 752, 1075
BmrI ACTGGG 1 cut(s) 615
BmsI GCATC 2 cut(s) 234, 745
BmuI ACTGGG 1 cut(s) 615
BpiI GAAGAC 3 cut(s) 226, 888, 1128
BplI GAGNNNNNCTC 2 cut(s) 315, 347
BpmI CTGGAG 1 cut(s) 404
BpuEI CTTGAG 2 cut(s) 125, 915
BpuMI CCSGG 2 cut(s) 413, 487
BsaAI YACGTR 3 cut(s) 1392, 1514, 1520
BsaBI GATNNNNATC 2 cut(s) 1170, 1356
BsaHI GRCGYC 3 cut(s) 249, 315, 797
BsaI GGTCTC 1 cut(s) 526
BsaJI CCNNGG 5 cut(s) 411, 730, 1073, 1074, 1239
BsaXI ACNNNNNCTCC 2 cut(s) 113, 143
Bsc4I CCNNNNNNNGG 6 cut(s) 427, 492, 746, 757, 1341, 1342
Bse1I ACTGG 5 cut(s) 50, 384, 610, 873, 1279
Bse8I GATNNNNATC 2 cut(s) 1170, 1356
BseBI CCWGG 4 cut(s) 422, 434, 752, 1075
BseDI CCNNGG 5 cut(s) 411, 730, 1073, 1074, 1239
BseGI GGATG 3 cut(s) 225, 760, 1249
BseJI GATNNNNATC 2 cut(s) 1170, 1356
BseLI CCNNNNNNNGG 6 cut(s) 427, 492, 746, 757, 1341, 1342
BseMII CTCAG 3 cut(s) 490, 537, 1044
BseNI ACTGG 5 cut(s) 50, 384, 610, 873, 1279
BseRI GAGGAG 4 cut(s) 68, 89, 259, 283
BseXI GCAGC 3 cut(s) 327, 381, 1112
BsgI GTGCAG 1 cut(s) 992
Bsh1236I CGCG 3 cut(s) 231, 335, 1456
BshFI GGCC 4 cut(s) 432, 512, 750, 1365
BshNI GGYRCC 2 cut(s) 364, 976
BsiHKAI GWGCWC 3 cut(s) 40, 420, 477
BsiHKCI CYCGRG 2 cut(s) 455, 687
BsiSI CCGG 3 cut(s) 321, 413, 486
BslFI GGGAC 1 cut(s) 1145
BslI CCNNNNNNNGG 6 cut(s) 427, 492, 746, 757, 1341, 1342
BsmAI GTCTC 6 cut(s) 58, 133, 526, 690, 933, 997
BsmBI CGTCTC 2 cut(s) 133, 690
BsmFI GGGAC 1 cut(s) 1145
BsmI GAATGC 2 cut(s) 874, 926
BsnI GGCC 4 cut(s) 432, 512, 750, 1365
Bso31I GGTCTC 1 cut(s) 526
BsoBI CYCGRG 2 cut(s) 455, 687
Bsp1286I GDGCHC 3 cut(s) 40, 420, 477
Bsp143I GATC 3 cut(s) 438, 479, 1171
Bsp19I CCATGG 1 cut(s) 1239
BspANI GGCC 4 cut(s) 432, 512, 750, 1365
BspCNI CTCAG 3 cut(s) 489, 536, 1045
BspFNI CGCG 3 cut(s) 231, 335, 1456
BspLI GGNNCC 4 cut(s) 325, 366, 978, 1332
BspMI ACCTGC 2 cut(s) 352, 628
BspQI GCTCTTC 1 cut(s) 525
BspT107I GGYRCC 2 cut(s) 364, 976
BspTNI GGTCTC 1 cut(s) 526
BsrBI CCGCTC 2 cut(s) 257, 276
BsrI ACTGG 5 cut(s) 50, 384, 610, 873, 1279
BssECI CCNNGG 5 cut(s) 411, 730, 1073, 1074, 1239
BssMI GATC 3 cut(s) 438, 479, 1171
BssNI GRCGYC 3 cut(s) 249, 315, 797
BssT1I CCWWGG 1 cut(s) 1239
Bst2UI CCWGG 4 cut(s) 422, 434, 752, 1075
Bst4CI ACNGT 5 cut(s) 865, 1118, 1215, 1226, 1467
Bst6I CTCTTC 5 cut(s) 26, 122, 191, 525, 578
BstACI GRCGYC 3 cut(s) 249, 315, 797
BstBAI YACGTR 3 cut(s) 1392, 1514, 1520
BstC8I GCNNGC 6 cut(s) 307, 381, 737, 971, 975, 1022
BstDEI CTNAG 3 cut(s) 476, 523, 1053
BstDSI CCRYGG 2 cut(s) 730, 1239
BstF5I GGATG 3 cut(s) 225, 760, 1249
BstFNI CGCG 3 cut(s) 231, 335, 1456
BstHHI GCGC 1 cut(s) 337
BstKTI GATC 3 cut(s) 441, 482, 1174
BstMAI GTCTC 6 cut(s) 58, 133, 526, 690, 933, 997
BstMBI GATC 3 cut(s) 438, 479, 1171
BstMWI GCNNNNNNNGC 7 cut(s) 44, 66, 215, 323, 332, 566, 1430
BstNI CCWGG 4 cut(s) 422, 434, 752, 1075
BstSCI CCNGG 6 cut(s) 411, 420, 432, 485, 750, 1073
BstSFI CTRYAG 1 cut(s) 784
BstSNI TACGTA 1 cut(s) 1520
BstUI CGCG 3 cut(s) 231, 335, 1456
BstV1I GCAGC 3 cut(s) 327, 381, 1112
BstV2I GAAGAC 3 cut(s) 226, 888, 1128
BstX2I RGATCY 2 cut(s) 479, 1171
BstXI CCANNNNNNTGG 1 cut(s) 1373
BstYI RGATCY 2 cut(s) 479, 1171
BsuRI GGCC 4 cut(s) 432, 512, 750, 1365
BtgI CCRYGG 2 cut(s) 730, 1239
BtsCI GGATG 3 cut(s) 225, 760, 1249
BtsIMutI CAGTG 4 cut(s) 603, 870, 880, 1211
BveI ACCTGC 2 cut(s) 352, 628
Cac8I GCNNGC 6 cut(s) 307, 381, 737, 971, 975, 1022
CfoI GCGC 1 cut(s) 337
Cfr13I GGNCC 3 cut(s) 430, 510, 1363
CseI GACGC 5 cut(s) 220, 257, 323, 805, 1506
Csp6I GTAC 3 cut(s) 387, 842, 1517
CviAII CATG 3 cut(s) 1220, 1240, 1289
CviQI GTAC 3 cut(s) 387, 842, 1517
DdeI CTNAG 3 cut(s) 476, 523, 1053
DpnI GATC 3 cut(s) 440, 481, 1173
DpnII GATC 3 cut(s) 438, 479, 1171
EaeI YGGCCR 1 cut(s) 748
Eam1104I CTCTTC 5 cut(s) 26, 122, 191, 525, 578
EarI CTCTTC 5 cut(s) 26, 122, 191, 525, 578
EciI GGCGGA 1 cut(s) 921
Ecl136II GAGCTC 2 cut(s) 38, 418
Eco105I TACGTA 1 cut(s) 1520
Eco130I CCWWGG 1 cut(s) 1239
Eco24I GRGCYC 2 cut(s) 40, 420
Eco31I GGTCTC 1 cut(s) 526
Eco53kI GAGCTC 2 cut(s) 38, 418
Eco57I CTGAAG 1 cut(s) 615
Eco72I CACGTG 1 cut(s) 1514
Eco88I CYCGRG 2 cut(s) 455, 687
EcoICRI GAGCTC 2 cut(s) 38, 418
EcoRII CCWGG 4 cut(s) 420, 432, 750, 1073
EcoT14I CCWWGG 1 cut(s) 1239
EcoT38I GRGCYC 2 cut(s) 40, 420
ErhI CCWWGG 1 cut(s) 1239
Esp3I CGTCTC 2 cut(s) 133, 690
FaeI CATG 3 cut(s) 1223, 1243, 1292
FalI AAGNNNNNCTT 2 cut(s) 383, 415
FaqI GGGAC 1 cut(s) 1145
FatI CATG 3 cut(s) 1219, 1239, 1288
FauI CCCGC 4 cut(s) 230, 281, 292, 314
FblI GTMKAC 1 cut(s) 1108
Fnu4HI GCNGC 9 cut(s) 207, 303, 318, 338, 341, 395, 740, 759, 1101
FokI GGATG 3 cut(s) 212, 767, 1256
FriOI GRGCYC 2 cut(s) 40, 420
Fsp4HI GCNGC 9 cut(s) 207, 303, 318, 338, 341, 395, 740, 759, 1101
FspBI CTAG 5 cut(s) 813, 846, 890, 902, 1229
GlaI GCGC 1 cut(s) 336
GluI GCNGC 9 cut(s) 207, 303, 318, 338, 341, 395, 740, 759, 1101
GsuI CTGGAG 1 cut(s) 404
HaeIII GGCC 4 cut(s) 432, 512, 750, 1365
HapII CCGG 3 cut(s) 321, 413, 486
HgaI GACGC 5 cut(s) 220, 257, 323, 805, 1506
HhaI GCGC 1 cut(s) 337
Hin1I GRCGYC 3 cut(s) 249, 315, 797
Hin1II CATG 3 cut(s) 1223, 1243, 1292
Hin6I GCGC 1 cut(s) 335
HinP1I GCGC 1 cut(s) 335
HincII GTYRAC 1 cut(s) 12
HindII GTYRAC 1 cut(s) 12
HindIII AAGCTT 1 cut(s) 449
HinfI GANTC 9 cut(s) 176, 458, 767, 809, 823, 1166, 1233, 1297, 1382
HpaII CCGG 3 cut(s) 321, 413, 486
HphI GGTGA 6 cut(s) 157, 193, 539, 565, 710, 824
Hpy166II GTNNAC 4 cut(s) 12, 832, 1109, 1517
Hpy188I TCNGA 7 cut(s) 175, 479, 575, 808, 919, 1054, 1171
Hpy188III TCNNGA 4 cut(s) 455, 687, 813, 1009
Hpy8I GTNNAC 4 cut(s) 12, 832, 1109, 1517
Hpy99I CGWCG 3 cut(s) 251, 317, 799
HpyAV CCTTC 3 cut(s) 121, 307, 463
HpyCH4III ACNGT 5 cut(s) 865, 1118, 1215, 1226, 1467
HpyCH4IV ACGT 3 cut(s) 1391, 1513, 1519
HpyCH4V TGCA 9 cut(s) 637, 673, 924, 973, 984, 1219, 1265, 1409, 1450
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 66, 215, 323, 332, 566, 1430
HpyF3I CTNAG 3 cut(s) 476, 523, 1053
HpySE526I ACGT 3 cut(s) 1391, 1513, 1519
Hsp92I GRCGYC 3 cut(s) 249, 315, 797
Hsp92II CATG 3 cut(s) 1223, 1243, 1292
HspAI GCGC 1 cut(s) 335
Kzo9I GATC 3 cut(s) 438, 479, 1171
LguI GCTCTTC 1 cut(s) 525
LmnI GCTCC 7 cut(s) 43, 150, 262, 323, 348, 415, 423
Lsp1109I GCAGC 3 cut(s) 327, 381, 1112
LweI GCATC 2 cut(s) 234, 745
MaeI CTAG 5 cut(s) 813, 846, 890, 902, 1229
MaeII ACGT 3 cut(s) 1391, 1513, 1519
MaeIII GTNAC 3 cut(s) 640, 709, 1387
MalI GATC 3 cut(s) 440, 481, 1173
MbiI CCGCTC 2 cut(s) 257, 276
MboI GATC 3 cut(s) 438, 479, 1171
MfeI CAATTG 1 cut(s) 987
MflI RGATCY 2 cut(s) 479, 1171
MhlI GDGCHC 3 cut(s) 40, 420, 477
MlsI TGGCCA 1 cut(s) 750
MluCI AATT 6 cut(s) 161, 562, 698, 743, 987, 1026
MluNI TGGCCA 1 cut(s) 750
MlyI GAGTC 3 cut(s) 467, 1291, 1391
MmeI TCCRAC 3 cut(s) 1074, 1237, 1354
Mox20I TGGCCA 1 cut(s) 750
MroXI GAANNNNTTC 2 cut(s) 885, 913
MscI TGGCCA 1 cut(s) 750
MseI TTAA 3 cut(s) 947, 1418, 1469
Msp20I TGGCCA 1 cut(s) 750
MspA1I CMGCKG 2 cut(s) 340, 1103
MspI CCGG 3 cut(s) 321, 413, 486
MspR9I CCNGG 6 cut(s) 413, 422, 434, 487, 752, 1075
MunI CAATTG 1 cut(s) 987
Mva1269I GAATGC 2 cut(s) 874, 926
MvaI CCWGG 4 cut(s) 422, 434, 752, 1075
MvnI CGCG 3 cut(s) 231, 335, 1456
MwoI GCNNNNNNNGC 7 cut(s) 44, 66, 215, 323, 332, 566, 1430
NciI CCSGG 2 cut(s) 413, 487
NcoI CCATGG 1 cut(s) 1239
NdeII GATC 3 cut(s) 438, 479, 1171
NlaIII CATG 3 cut(s) 1223, 1243, 1292
NlaIV GGNNCC 4 cut(s) 325, 366, 978, 1332
NmeAIII GCCGAG 1 cut(s) 469
NmuCI GTSAC 1 cut(s) 1387
PaeR7I CTCGAG 2 cut(s) 455, 687
PaqCI CACCTGC 1 cut(s) 352
PasI CCCWGGG 1 cut(s) 1074
PciSI GCTCTTC 1 cut(s) 525
PcsI WCGNNNNNNNCGW 1 cut(s) 365
PctI GAATGC 2 cut(s) 874, 926
PdmI GAANNNNTTC 2 cut(s) 885, 913
PfeI GAWTC 6 cut(s) 176, 767, 809, 823, 1166, 1233
PflMI CCANNNNNTGG 1 cut(s) 427
PfoI TCCNGGA 1 cut(s) 420
PkrI GCNGC 9 cut(s) 208, 304, 319, 339, 342, 396, 741, 760, 1102
PleI GAGTC 3 cut(s) 466, 1291, 1390
PmaCI CACGTG 1 cut(s) 1514
PmlI CACGTG 1 cut(s) 1514
PpsI GAGTC 3 cut(s) 466, 1291, 1390
Ppu21I YACGTR 3 cut(s) 1392, 1514, 1520
Psp124BI GAGCTC 2 cut(s) 40, 420
Psp6I CCWGG 4 cut(s) 420, 432, 750, 1073
PspCI CACGTG 1 cut(s) 1514
PspGI CCWGG 4 cut(s) 420, 432, 750, 1073
PspN4I GGNNCC 4 cut(s) 325, 366, 978, 1332
PspPI GGNCC 3 cut(s) 430, 510, 1363
PsuI RGATCY 2 cut(s) 479, 1171
PvuII CAGCTG 1 cut(s) 1103
RsaI GTAC 3 cut(s) 388, 843, 1518
RsaNI GTAC 3 cut(s) 387, 842, 1517
SacI GAGCTC 2 cut(s) 40, 420
SapI GCTCTTC 1 cut(s) 525
SaqAI TTAA 3 cut(s) 947, 1418, 1469
SatI GCNGC 9 cut(s) 207, 303, 318, 338, 341, 395, 740, 759, 1101
Sau3AI GATC 3 cut(s) 438, 479, 1171
Sau96I GGNCC 3 cut(s) 430, 510, 1363
SchI GAGTC 3 cut(s) 467, 1291, 1391
ScrFI CCNGG 6 cut(s) 413, 422, 434, 487, 752, 1075
SduI GDGCHC 3 cut(s) 40, 420, 477
SfaNI GCATC 2 cut(s) 234, 745
SfcI CTRYAG 1 cut(s) 784
Sfr274I CTCGAG 2 cut(s) 455, 687
SlaI CTCGAG 2 cut(s) 455, 687
SmlI CTYRAG 4 cut(s) 140, 455, 687, 930
SmoI CTYRAG 4 cut(s) 140, 455, 687, 930
SnaBI TACGTA 1 cut(s) 1520
Sse9I AATT 6 cut(s) 161, 562, 698, 743, 987, 1026
SspI AATATT 3 cut(s) 1156, 1184, 1282
SspMI CTAG 5 cut(s) 813, 846, 890, 902, 1229
SstI GAGCTC 2 cut(s) 40, 420
StyD4I CCNGG 6 cut(s) 411, 420, 432, 485, 750, 1073
StyI CCWWGG 1 cut(s) 1239
TaaI ACNGT 5 cut(s) 865, 1118, 1215, 1226, 1467
TaiI ACGT 3 cut(s) 1394, 1516, 1522
TaqI TCGA 6 cut(s) 29, 246, 456, 688, 794, 1008
TasI AATT 6 cut(s) 161, 562, 698, 743, 987, 1026
TauI GCSGC 6 cut(s) 209, 305, 320, 340, 742, 761
TfiI GAWTC 6 cut(s) 176, 767, 809, 823, 1166, 1233
Tru1I TTAA 3 cut(s) 947, 1418, 1469
Tru9I TTAA 3 cut(s) 947, 1418, 1469
TscAI CASTG 4 cut(s) 610, 870, 880, 1218
TseFI GTSAC 1 cut(s) 1387
TseI GCWGC 3 cut(s) 340, 394, 1100
Tsp45I GTSAC 1 cut(s) 1387
TspDTI ATGAA 4 cut(s) 386, 792, 894, 1300
TspGWI ACGGA 1 cut(s) 672
TspRI CASTG 4 cut(s) 610, 870, 880, 1218
Van91I CCANNNNNTGG 1 cut(s) 427
XapI RAATTY 1 cut(s) 161
XbaI TCTAGA 1 cut(s) 812
XhoI CTCGAG 2 cut(s) 455, 687
XmiI GTMKAC 1 cut(s) 1108
XmnI GAANNNNTTC 2 cut(s) 885, 913
XspI CTAG 5 cut(s) 813, 846, 890, 902, 1229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.