Belongs to the GDA1 CD39 NTPase family
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1180600.v1.1 |
| prunus_persica | Prupe.6G153100_v2.0.a1 |
| pyrus_communis | pycom11g15580 |
| rosa_chinensis | RchiOBHm_Chr5g0049751 |
| rosa_laevigata | RLG00000034644 |
| rosa_multiflora | Rmu_sc0016686.1_g000002 Rmu_sc0020783.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00031680 |
| rosa_rugosa | Rorug05G0250800 Rorug05G0250800 Rorug05G0250900 |
| rosa_samantha | Rh5AG326900 Rh5BG338000 Rh5CG362600 Rh5DG350200 |
| rosa_wichuraiana | Rw0G018430 Rw5G030880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 483 |
| Acc36I | ACCTGC | 2 cut(s) | 670, 1145 |
| AccB1I | GGYRCC | 3 cut(s) | 293, 406, 1120 |
| AccII | CGCG | 2 cut(s) | 273, 360 |
| AcoI | YGGCCR | 2 cut(s) | 790, 1411 |
| AcsI | RAATTY | 3 cut(s) | 203, 715, 856 |
| AcyI | GRCGYC | 2 cut(s) | 480, 845 |
| AdeI | CACNNNGTG | 1 cut(s) | 1355 |
| AfaI | GTAC | 2 cut(s) | 1494, 1566 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 65, 374, 534, 788, 1392, 1393 |
| AgsI | TTSAA | 7 cut(s) | 541, 659, 855, 1142, 1231, 1370, 1391 |
| AjnI | CCWGG | 4 cut(s) | 402, 565, 590, 792 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 425, 457 |
| AluBI | AGCT | 8 cut(s) | 309, 436, 460, 493, 803, 907, 1108, 1472 |
| AluI | AGCT | 8 cut(s) | 309, 436, 460, 493, 803, 907, 1108, 1472 |
| Alw21I | GWGCWC | 1 cut(s) | 1027 |
| Alw26I | GTCTC | 4 cut(s) | 46, 487, 1045, 1316 |
| Alw44I | GTGCAC | 1 cut(s) | 1023 |
| Ama87I | CYCGRG | 2 cut(s) | 497, 555 |
| AoxI | GGCC | 5 cut(s) | 364, 376, 552, 790, 1411 |
| ApaI | GGGCCC | 1 cut(s) | 556 |
| ApaLI | GTGCAC | 1 cut(s) | 1023 |
| ApeKI | GCWGC | 5 cut(s) | 81, 96, 692, 800, 1151 |
| ApoI | RAATTY | 3 cut(s) | 203, 715, 856 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 961 |
| AspA2I | CCTAGG | 1 cut(s) | 1568 |
| AspLEI | GCGC | 5 cut(s) | 86, 362, 423, 517, 1264 |
| AspS9I | GGNCC | 4 cut(s) | 365, 377, 552, 553 |
| AsuC2I | CCSGG | 2 cut(s) | 529, 1504 |
| AsuHPI | GGTGA | 3 cut(s) | 581, 607, 1549 |
| AvaI | CYCGRG | 2 cut(s) | 497, 555 |
| AvrII | CCTAGG | 1 cut(s) | 1568 |
| AxyI | CCTNAGG | 1 cut(s) | 636 |
| BaeGI | GKGCMC | 3 cut(s) | 411, 556, 1027 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 1548 |
| BalI | TGGCCA | 1 cut(s) | 792 |
| BanI | GGYRCC | 3 cut(s) | 293, 406, 1120 |
| BanII | GRGCYC | 3 cut(s) | 455, 556, 1386 |
| BbsI | GAAGAC | 1 cut(s) | 268 |
| Bbv12I | GWGCWC | 1 cut(s) | 1027 |
| BbvI | GCAGC | 5 cut(s) | 93, 108, 679, 812, 1163 |
| BccI | CCATC | 2 cut(s) | 269, 733 |
| BceAI | ACGGC | 2 cut(s) | 307, 1143 |
| BciT130I | CCWGG | 4 cut(s) | 404, 567, 592, 794 |
| BcnI | CCSGG | 2 cut(s) | 529, 1504 |
| BcoDI | GTCTC | 4 cut(s) | 46, 487, 1045, 1316 |
| BfaI | CTAG | 5 cut(s) | 894, 921, 938, 1280, 1569 |
| BfoI | RGCGCY | 4 cut(s) | 87, 424, 518, 1265 |
| BfuAI | ACCTGC | 2 cut(s) | 670, 1145 |
| BglII | AGATCT | 1 cut(s) | 1222 |
| BisI | GCNGC | 7 cut(s) | 59, 82, 97, 693, 782, 801, 1152 |
| BlnI | CCTAGG | 1 cut(s) | 1568 |
| BlsI | GCNGC | 7 cut(s) | 60, 83, 98, 694, 783, 802, 1153 |
| Bme1390I | CCNGG | 6 cut(s) | 404, 529, 567, 592, 794, 1504 |
| BmeT110I | CYCGRG | 2 cut(s) | 497, 555 |
| BmgT120I | GGNCC | 4 cut(s) | 365, 377, 552, 553 |
| BmiI | GGNNCC | 8 cut(s) | 295, 367, 379, 408, 475, 554, 1122, 1383 |
| BmrFI | CCNGG | 6 cut(s) | 404, 529, 567, 592, 794, 1504 |
| BmrI | ACTGGG | 3 cut(s) | 57, 657, 1361 |
| BmsI | GCATC | 6 cut(s) | 243, 276, 787, 916, 998, 1210 |
| BmuI | ACTGGG | 3 cut(s) | 57, 657, 1361 |
| BpiI | GAAGAC | 1 cut(s) | 268 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 449, 481, 619, 651 |
| BpmI | CTGGAG | 3 cut(s) | 289, 386, 1400 |
| Bpu10I | CCTNAGC | 1 cut(s) | 518 |
| BpuMI | CCSGG | 2 cut(s) | 529, 1504 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1221 |
| BsaHI | GRCGYC | 2 cut(s) | 480, 845 |
| BsaI | GGTCTC | 2 cut(s) | 46, 1316 |
| BsaJI | CCNNGG | 6 cut(s) | 373, 469, 591, 613, 1290, 1568 |
| BsaWI | WCCGGW | 1 cut(s) | 1325 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 155, 185, 203, 233 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 65, 374, 534, 788, 1392, 1393 |
| Bse118I | RCCGGY | 1 cut(s) | 362 |
| Bse1I | ACTGG | 4 cut(s) | 63, 82, 652, 1356 |
| Bse21I | CCTNAGG | 1 cut(s) | 636 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1221 |
| BseBI | CCWGG | 4 cut(s) | 404, 567, 592, 794 |
| BseDI | CCNNGG | 6 cut(s) | 373, 469, 591, 613, 1290, 1568 |
| BseGI | GGATG | 6 cut(s) | 123, 261, 267, 802, 1043, 1300 |
| BseJI | GATNNNNATC | 1 cut(s) | 1221 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 65, 374, 534, 788, 1392, 1393 |
| BseMII | CTCAG | 5 cut(s) | 447, 532, 650, 969, 1095 |
| BseNI | ACTGG | 4 cut(s) | 63, 82, 652, 1356 |
| BseRI | GAGGAG | 7 cut(s) | 131, 158, 247, 301, 304, 307, 428 |
| BseSI | GKGCMC | 3 cut(s) | 411, 556, 1027 |
| BseXI | GCAGC | 5 cut(s) | 93, 108, 679, 812, 1163 |
| Bsh1236I | CGCG | 2 cut(s) | 273, 360 |
| Bsh1285I | CGRYCG | 1 cut(s) | 358 |
| BshFI | GGCC | 5 cut(s) | 366, 378, 554, 792, 1413 |
| BshNI | GGYRCC | 3 cut(s) | 293, 406, 1120 |
| BsiEI | CGRYCG | 1 cut(s) | 358 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1027 |
| BsiHKCI | CYCGRG | 2 cut(s) | 497, 555 |
| BsiSI | CCGG | 5 cut(s) | 363, 508, 528, 1326, 1504 |
| BslFI | GGGAC | 2 cut(s) | 682, 1557 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 65, 374, 534, 788, 1392, 1393 |
| BsmAI | GTCTC | 4 cut(s) | 46, 487, 1045, 1316 |
| BsmBI | CGTCTC | 1 cut(s) | 487 |
| BsmFI | GGGAC | 2 cut(s) | 682, 1557 |
| BsmI | GAATGC | 1 cut(s) | 922 |
| BsnI | GGCC | 5 cut(s) | 366, 378, 554, 792, 1413 |
| Bso31I | GGTCTC | 2 cut(s) | 46, 1316 |
| BsoBI | CYCGRG | 2 cut(s) | 497, 555 |
| Bsp120I | GGGCCC | 1 cut(s) | 552 |
| Bsp1286I | GDGCHC | 5 cut(s) | 411, 455, 556, 1027, 1386 |
| Bsp143I | GATC | 1 cut(s) | 1222 |
| Bsp19I | CCATGG | 1 cut(s) | 1290 |
| BspANI | GGCC | 5 cut(s) | 366, 378, 554, 792, 1413 |
| BspCNI | CTCAG | 5 cut(s) | 448, 531, 649, 970, 1096 |
| BspFNI | CGCG | 2 cut(s) | 273, 360 |
| BspLI | GGNNCC | 8 cut(s) | 295, 367, 379, 408, 475, 554, 1122, 1383 |
| BspMI | ACCTGC | 2 cut(s) | 670, 1145 |
| BspT107I | GGYRCC | 3 cut(s) | 293, 406, 1120 |
| BspTNI | GGTCTC | 2 cut(s) | 46, 1316 |
| BsrFI | RCCGGY | 1 cut(s) | 362 |
| BsrI | ACTGG | 4 cut(s) | 63, 82, 652, 1356 |
| BssAI | RCCGGY | 1 cut(s) | 362 |
| BssECI | CCNNGG | 6 cut(s) | 373, 469, 591, 613, 1290, 1568 |
| BssMI | GATC | 1 cut(s) | 1222 |
| BssNI | GRCGYC | 2 cut(s) | 480, 845 |
| BssT1I | CCWWGG | 3 cut(s) | 613, 1290, 1568 |
| Bst2UI | CCWGG | 4 cut(s) | 404, 567, 592, 794 |
| Bst4CI | ACNGT | 4 cut(s) | 770, 913, 1277, 1548 |
| Bst6I | CTCTTC | 3 cut(s) | 164, 233, 446 |
| BstACI | GRCGYC | 2 cut(s) | 480, 845 |
| BstC8I | GCNNGC | 5 cut(s) | 250, 364, 779, 970, 1070 |
| BstDEI | CTNAG | 5 cut(s) | 456, 518, 636, 978, 1104 |
| BstDSI | CCRYGG | 1 cut(s) | 1290 |
| BstEII | GGTNACC | 1 cut(s) | 878 |
| BstF5I | GGATG | 6 cut(s) | 123, 261, 267, 802, 1043, 1300 |
| BstFNI | CGCG | 2 cut(s) | 273, 360 |
| BstH2I | RGCGCY | 4 cut(s) | 87, 424, 518, 1265 |
| BstHHI | GCGC | 5 cut(s) | 86, 362, 423, 517, 1264 |
| BstKTI | GATC | 1 cut(s) | 1225 |
| BstMAI | GTCTC | 4 cut(s) | 46, 487, 1045, 1316 |
| BstMBI | GATC | 1 cut(s) | 1222 |
| BstMCI | CGRYCG | 1 cut(s) | 358 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 81, 102, 608, 926, 1114, 1478 |
| BstNI | CCWGG | 4 cut(s) | 404, 567, 592, 794 |
| BstNSI | RCATGY | 1 cut(s) | 972 |
| BstPI | GGTNACC | 1 cut(s) | 878 |
| BstSCI | CCNGG | 6 cut(s) | 402, 527, 565, 590, 792, 1502 |
| BstSLI | GKGCMC | 3 cut(s) | 411, 556, 1027 |
| BstUI | CGCG | 2 cut(s) | 273, 360 |
| BstV1I | GCAGC | 5 cut(s) | 93, 108, 679, 812, 1163 |
| BstV2I | GAAGAC | 1 cut(s) | 268 |
| BstX2I | RGATCY | 1 cut(s) | 1222 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1421 |
| BstYI | RGATCY | 1 cut(s) | 1222 |
| Bsu36I | CCTNAGG | 1 cut(s) | 636 |
| BsuRI | GGCC | 5 cut(s) | 366, 378, 554, 792, 1413 |
| BtgI | CCRYGG | 1 cut(s) | 1290 |
| BtsCI | GGATG | 6 cut(s) | 123, 261, 267, 802, 1043, 1300 |
| BtsIMutI | CAGTG | 5 cut(s) | 70, 75, 645, 918, 1349 |
| BveI | ACCTGC | 2 cut(s) | 670, 1145 |
| Cac8I | GCNNGC | 5 cut(s) | 250, 364, 779, 970, 1070 |
| CfoI | GCGC | 5 cut(s) | 86, 362, 423, 517, 1264 |
| Cfr10I | RCCGGY | 1 cut(s) | 362 |
| Cfr13I | GGNCC | 4 cut(s) | 365, 377, 552, 553 |
| CseI | GACGC | 2 cut(s) | 262, 853 |
| Csp6I | GTAC | 2 cut(s) | 1493, 1565 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 634, 669 |
| CviAII | CATG | 3 cut(s) | 969, 1271, 1291 |
| CviQI | GTAC | 2 cut(s) | 1493, 1565 |
| DdeI | CTNAG | 5 cut(s) | 456, 518, 636, 978, 1104 |
| DpnI | GATC | 1 cut(s) | 1224 |
| DpnII | GATC | 1 cut(s) | 1222 |
| DraIII | CACNNNGTG | 1 cut(s) | 1355 |
| EaeI | YGGCCR | 2 cut(s) | 790, 1411 |
| Eam1104I | CTCTTC | 3 cut(s) | 164, 233, 446 |
| EarI | CTCTTC | 3 cut(s) | 164, 233, 446 |
| EciI | GGCGGA | 2 cut(s) | 235, 325 |
| Eco130I | CCWWGG | 3 cut(s) | 613, 1290, 1568 |
| Eco24I | GRGCYC | 3 cut(s) | 455, 556, 1386 |
| Eco31I | GGTCTC | 2 cut(s) | 46, 1316 |
| Eco81I | CCTNAGG | 1 cut(s) | 636 |
| Eco88I | CYCGRG | 2 cut(s) | 497, 555 |
| Eco91I | GGTNACC | 1 cut(s) | 878 |
| EcoO65I | GGTNACC | 1 cut(s) | 878 |
| EcoRI | GAATTC | 1 cut(s) | 715 |
| EcoRII | CCWGG | 4 cut(s) | 402, 565, 590, 792 |
| EcoT14I | CCWWGG | 3 cut(s) | 613, 1290, 1568 |
| EcoT22I | ATGCAT | 1 cut(s) | 1019 |
| EcoT38I | GRGCYC | 3 cut(s) | 455, 556, 1386 |
| ErhI | CCWWGG | 3 cut(s) | 613, 1290, 1568 |
| Esp3I | CGTCTC | 1 cut(s) | 487 |
| FaeI | CATG | 3 cut(s) | 972, 1274, 1294 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 425, 457 |
| FaqI | GGGAC | 2 cut(s) | 682, 1557 |
| FatI | CATG | 3 cut(s) | 968, 1270, 1290 |
| FauI | CCCGC | 2 cut(s) | 257, 329 |
| Fnu4HI | GCNGC | 7 cut(s) | 59, 82, 97, 693, 782, 801, 1152 |
| FokI | GGATG | 6 cut(s) | 110, 248, 254, 809, 1030, 1307 |
| FriOI | GRGCYC | 3 cut(s) | 455, 556, 1386 |
| Fsp4HI | GCNGC | 7 cut(s) | 59, 82, 97, 693, 782, 801, 1152 |
| FspBI | CTAG | 5 cut(s) | 894, 921, 938, 1280, 1569 |
| GlaI | GCGC | 5 cut(s) | 85, 361, 422, 516, 1263 |
| GluI | GCNGC | 7 cut(s) | 59, 82, 97, 693, 782, 801, 1152 |
| GsuI | CTGGAG | 3 cut(s) | 289, 386, 1400 |
| HaeII | RGCGCY | 4 cut(s) | 87, 424, 518, 1265 |
| HaeIII | GGCC | 5 cut(s) | 366, 378, 554, 792, 1413 |
| HapII | CCGG | 5 cut(s) | 363, 508, 528, 1326, 1504 |
| HgaI | GACGC | 2 cut(s) | 262, 853 |
| HhaI | GCGC | 5 cut(s) | 86, 362, 423, 517, 1264 |
| Hin1I | GRCGYC | 2 cut(s) | 480, 845 |
| Hin1II | CATG | 3 cut(s) | 972, 1274, 1294 |
| Hin6I | GCGC | 5 cut(s) | 84, 360, 421, 515, 1262 |
| HinP1I | GCGC | 5 cut(s) | 84, 360, 421, 515, 1262 |
| HincII | GTYRAC | 3 cut(s) | 12, 843, 1160 |
| HindII | GTYRAC | 3 cut(s) | 12, 843, 1160 |
| HindIII | AAGCTT | 1 cut(s) | 491 |
| HinfI | GANTC | 8 cut(s) | 464, 500, 558, 732, 809, 1217, 1284, 1430 |
| HpaII | CCGG | 5 cut(s) | 363, 508, 528, 1326, 1504 |
| HphI | GGTGA | 3 cut(s) | 581, 607, 1549 |
| Hpy166II | GTNNAC | 5 cut(s) | 12, 843, 1025, 1160, 1565 |
| Hpy188I | TCNGA | 6 cut(s) | 457, 478, 487, 979, 1105, 1222 |
| Hpy188III | TCNNGA | 5 cut(s) | 497, 638, 705, 729, 834 |
| Hpy8I | GTNNAC | 5 cut(s) | 12, 843, 1025, 1160, 1565 |
| Hpy99I | CGWCG | 2 cut(s) | 293, 482 |
| HpyAV | CCTTC | 3 cut(s) | 116, 505, 1534 |
| HpyCH4III | ACNGT | 4 cut(s) | 770, 913, 1277, 1548 |
| HpyCH4IV | ACGT | 2 cut(s) | 480, 686 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 81, 102, 608, 926, 1114, 1478 |
| HpyF3I | CTNAG | 5 cut(s) | 456, 518, 636, 978, 1104 |
| HpySE526I | ACGT | 2 cut(s) | 480, 686 |
| Hsp92I | GRCGYC | 2 cut(s) | 480, 845 |
| Hsp92II | CATG | 3 cut(s) | 972, 1274, 1294 |
| HspAI | GCGC | 5 cut(s) | 84, 360, 421, 515, 1262 |
| KroI | GCCGGC | 1 cut(s) | 362 |
| KroNI | GCCGGC | 1 cut(s) | 364 |
| Kzo9I | GATC | 1 cut(s) | 1222 |
| LmnI | GCTCC | 5 cut(s) | 314, 390, 441, 479, 1381 |
| Lsp1109I | GCAGC | 5 cut(s) | 93, 108, 679, 812, 1163 |
| LweI | GCATC | 6 cut(s) | 243, 276, 787, 916, 998, 1210 |
| MaeI | CTAG | 5 cut(s) | 894, 921, 938, 1280, 1569 |
| MaeII | ACGT | 2 cut(s) | 480, 686 |
| MaeIII | GTNAC | 5 cut(s) | 682, 751, 878, 1059, 1435 |
| MalI | GATC | 1 cut(s) | 1224 |
| MboI | GATC | 1 cut(s) | 1222 |
| MboII | GAAGA | 5 cut(s) | 151, 220, 268, 433, 1184 |
| MflI | RGATCY | 1 cut(s) | 1222 |
| MhlI | GDGCHC | 5 cut(s) | 411, 455, 556, 1027, 1386 |
| MlsI | TGGCCA | 1 cut(s) | 792 |
| MluCI | AATT | 6 cut(s) | 203, 604, 715, 856, 1035, 1142 |
| MluNI | TGGCCA | 1 cut(s) | 792 |
| MlyI | GAGTC | 4 cut(s) | 458, 509, 567, 1439 |
| MmeI | TCCRAC | 3 cut(s) | 501, 1288, 1402 |
| Mox20I | TGGCCA | 1 cut(s) | 792 |
| Mph1103I | ATGCAT | 1 cut(s) | 1019 |
| MroNI | GCCGGC | 1 cut(s) | 362 |
| MroXI | GAANNNNTTC | 1 cut(s) | 961 |
| MscI | TGGCCA | 1 cut(s) | 792 |
| MseI | TTAA | 2 cut(s) | 995, 1466 |
| Msp20I | TGGCCA | 1 cut(s) | 792 |
| MspI | CCGG | 5 cut(s) | 363, 508, 528, 1326, 1504 |
| MspR9I | CCNGG | 6 cut(s) | 404, 529, 567, 592, 794, 1504 |
| Mva1269I | GAATGC | 1 cut(s) | 922 |
| MvaI | CCWGG | 4 cut(s) | 404, 567, 592, 794 |
| MvnI | CGCG | 2 cut(s) | 273, 360 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 81, 102, 608, 926, 1114, 1478 |
| NaeI | GCCGGC | 1 cut(s) | 364 |
| NciI | CCSGG | 2 cut(s) | 529, 1504 |
| NcoI | CCATGG | 1 cut(s) | 1290 |
| NdeII | GATC | 1 cut(s) | 1222 |
| NgoMIV | GCCGGC | 1 cut(s) | 362 |
| NlaIII | CATG | 3 cut(s) | 972, 1274, 1294 |
| NlaIV | GGNNCC | 8 cut(s) | 295, 367, 379, 408, 475, 554, 1122, 1383 |
| NmeAIII | GCCGAG | 2 cut(s) | 354, 450 |
| NmuCI | GTSAC | 1 cut(s) | 1435 |
| NsiI | ATGCAT | 1 cut(s) | 1019 |
| NspI | RCATGY | 1 cut(s) | 972 |
| PaeI | GCATGC | 1 cut(s) | 972 |
| PaeR7I | CTCGAG | 1 cut(s) | 497 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 477 |
| PctI | GAATGC | 1 cut(s) | 922 |
| PdiI | GCCGGC | 1 cut(s) | 364 |
| PdmI | GAANNNNTTC | 1 cut(s) | 961 |
| PfeI | GAWTC | 4 cut(s) | 732, 809, 1217, 1284 |
| PfoI | TCCNGGA | 1 cut(s) | 1502 |
| PkrI | GCNGC | 7 cut(s) | 60, 83, 98, 694, 783, 802, 1153 |
| PleI | GAGTC | 4 cut(s) | 458, 508, 566, 1438 |
| PpsI | GAGTC | 4 cut(s) | 458, 508, 566, 1438 |
| Psp6I | CCWGG | 4 cut(s) | 402, 565, 590, 792 |
| PspEI | GGTNACC | 1 cut(s) | 878 |
| PspGI | CCWGG | 4 cut(s) | 402, 565, 590, 792 |
| PspN4I | GGNNCC | 8 cut(s) | 295, 367, 379, 408, 475, 554, 1122, 1383 |
| PspOMI | GGGCCC | 1 cut(s) | 552 |
| PspPI | GGNCC | 4 cut(s) | 365, 377, 552, 553 |
| PsuI | RGATCY | 1 cut(s) | 1222 |
| RsaI | GTAC | 2 cut(s) | 1494, 1566 |
| RsaNI | GTAC | 2 cut(s) | 1493, 1565 |
| SaqAI | TTAA | 2 cut(s) | 995, 1466 |
| SatI | GCNGC | 7 cut(s) | 59, 82, 97, 693, 782, 801, 1152 |
| Sau3AI | GATC | 1 cut(s) | 1222 |
| Sau96I | GGNCC | 4 cut(s) | 365, 377, 552, 553 |
| SchI | GAGTC | 4 cut(s) | 458, 509, 567, 1439 |
| ScrFI | CCNGG | 6 cut(s) | 404, 529, 567, 592, 794, 1504 |
| SduI | GDGCHC | 5 cut(s) | 411, 455, 556, 1027, 1386 |
| SfaNI | GCATC | 6 cut(s) | 243, 276, 787, 916, 998, 1210 |
| Sfr274I | CTCGAG | 1 cut(s) | 497 |
| SlaI | CTCGAG | 1 cut(s) | 497 |
| SmlI | CTYRAG | 1 cut(s) | 497 |
| SmoI | CTYRAG | 1 cut(s) | 497 |
| SphI | GCATGC | 1 cut(s) | 972 |
| Sse9I | AATT | 6 cut(s) | 203, 604, 715, 856, 1035, 1142 |
| SspI | AATATT | 1 cut(s) | 1235 |
| SspMI | CTAG | 5 cut(s) | 894, 921, 938, 1280, 1569 |
| StyD4I | CCNGG | 6 cut(s) | 402, 527, 565, 590, 792, 1502 |
| StyI | CCWWGG | 3 cut(s) | 613, 1290, 1568 |
| TaaI | ACNGT | 4 cut(s) | 770, 913, 1277, 1548 |
| TaiI | ACGT | 2 cut(s) | 483, 689 |
| TaqI | TCGA | 3 cut(s) | 288, 498, 730 |
| TasI | AATT | 6 cut(s) | 203, 604, 715, 856, 1035, 1142 |
| TatI | WGTACW | 1 cut(s) | 1492 |
| TauI | GCSGC | 2 cut(s) | 61, 784 |
| TfiI | GAWTC | 4 cut(s) | 732, 809, 1217, 1284 |
| Tru1I | TTAA | 2 cut(s) | 995, 1466 |
| Tru9I | TTAA | 2 cut(s) | 995, 1466 |
| TscAI | CASTG | 5 cut(s) | 70, 82, 652, 918, 1356 |
| TseFI | GTSAC | 1 cut(s) | 1435 |
| TseI | GCWGC | 5 cut(s) | 81, 96, 692, 800, 1151 |
| Tsp45I | GTSAC | 1 cut(s) | 1435 |
| TspDTI | ATGAA | 1 cut(s) | 1233 |
| TspGWI | ACGGA | 1 cut(s) | 79 |
| TspRI | CASTG | 5 cut(s) | 70, 82, 652, 918, 1356 |
| VneI | GTGCAC | 1 cut(s) | 1023 |
| XapI | RAATTY | 3 cut(s) | 203, 715, 856 |
| XceI | RCATGY | 1 cut(s) | 972 |
| XhoI | CTCGAG | 1 cut(s) | 497 |
| XmaJI | CCTAGG | 1 cut(s) | 1568 |
| XmnI | GAANNNNTTC | 1 cut(s) | 961 |
| XspI | CTAG | 5 cut(s) | 894, 921, 938, 1280, 1569 |
| ZraI | GACGTC | 1 cut(s) | 481 |
| Zsp2I | ATGCAT | 1 cut(s) | 1019 |