Rorug05G0250900

Belongs to the GDA1 CD39 NTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0014823
Physical Location & Seq
Forward (+)
27512583 .. 27517569
4987 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0250900.1

Sequence Viewer

Length: 1860 bp
ATGTCCAGATTTTTGGCATATGGAAATGTAAGGAGGGTTGCGCGACAAGTTACGAGTAACAGGGCAGATCACACAGTTGAAGCTCCTTACATGCTCTGCCGGTTATTTTTGAGAAATAAACATTCTATAAGAGGGCAATCCCCATTTCTGCTACATAGAGCAAAAGATAAGTTTTTGAATAGTAGTGGTTATAGGAACTTATATACCATATCAGCAAGGAGTGCAGCTTCTCAACATGCCCAGTTTGCTTGGAGAAAGCTTTCTCACTTGTATTTCTATCGGCAAACAACCTTCCCCCCAATAGGTCGAATTGCCCGTGCTGTGAGCTTGGCTTTGACCCGCTCAAATTTAGTAGCTCCTGGTGTTTTTTCCTTTGTAGTTGGAGAGTTTGTTCGGGCGCAGCGTACATGTGCAGAAGCAGAAGGCCTTCCAACAAAGGACACTTTATATATTCATGCCCAAGATGGACATATTTATTTGGCCTTATTTTTGGTTTCACTTCTGGAGTGTATTATCTTGTTTGTCAGAGCAATTTATCTAGCAGTTTTATTCTCACCGTGTATAGCCATGTCACTTTTTAAGGATTCCCTCGGCCCCCGGTTTAGGAAAAAATGGCTTCATGTTGTTCATCATACACTGGAAAAAGCAGGCCCAGCATTTATAAAATGGGGTCAATGGGCTGCTGCAAGGCCAGATCTCTTCCCAAGAGATTTGTGTGCTGAACTTGAGAAACTCCACACTAAAGCTCCAGCACATAGCTTTGACTTTACCAAAAATAGTATTGAAAAGGCATTTGGTCGCAAGCTGCCTGAAATATTTGAAAATTTTGATGAGGAACCTGTGGCGTCGGGAAGTGTTGCTCAAGTTCATCAAGCTATACTCAAGTACAGATACCCGGGTCAGAAGATCAAGCCCATTTTAGTTGCTGTTAAGGTTAGACATCCAGGTGTTGGTGAAACAATTAGGAGGGATTTTGTGATAATCAATTCTGTAGCCAAAATTTCAAGGTTCATCCCTTCTTTGAAATTGTGGAGATTGGATGAAAGCCTACAGCAATTTGCCGTTTATATGATGTCACAAGTTGATCTGTCAAGGGAAGCTGCACATTTGAGTCGTTTTAGCTATAATTTTCGAAGATCGAAAGATGTCTCATTTCCAAGGCCTCTATACCCCTTGGTGCACCCATCTGTTTTAGTCGAAACGTACGAGCAGGGTGAAAGTGTTCAGCACTACGTCGATGAACTTGAGGGCAATGAACCGATAAAAAATGCCCTTGCTCAGATCGGAACCAATGCACTACTGAAGATGCTTCTGGTAGATAATTTTATTCATGCAGACATGCATCCTGGAAATATTCTTGTCCGAGTAACCCGTAGTAAGGTTCCAAGTAAAGAACTCTTTAGATTGAGGCCTCATGTTGTTTTCCTTGATGTGGGCTTGACTGCCGAACTTTCTAAGAGGGATCGACTGAATTTAGTGGAGTTCTTTAAGGCTGTGGCCCTTCGTGACGGTCAAAGTGTTGCGGAGTGCACACTTAGATTATCTGGACAACAAAACTGCCCAAATCCAAGTGCTTTTATTGAGGAAGTGGATAAATCTTTCAAATTATGGGACTCCCCAGAAGGTGATGCCATGCATCCTGGTGACTGCATGCAGCAATTGCTTGAGCAAGTCAGGCGGCACAAAGTCAAACTGGATGGCAATGTGTGCACAGTTATTGTAACCACTTTGGTTCTTGAGGGATGGCAGCGGAAACTTGATCCAGACTATGACATGATGCATACTTTACGGACCTTGCTTTTTAAGGCGGACTGGGCAGAGTCCCTCTTTTACACCATTGAAGGACTCATTGCCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko05169 map00230 map00240 map05169
Pfam Domains
Protein Families
GDA1_CD39

Protein Analysis

619

Amino Acids

70.61

Weight (kDa)

9.48

Isoelectric Point (pI)

45.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 244 - 509 9.9e-47 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014823)

Species Orthologous Gene IDs
malus_domestica MD11G1180600.v1.1
prunus_persica Prupe.6G153100_v2.0.a1
pyrus_communis pycom11g15580
rosa_chinensis RchiOBHm_Chr5g0049751
rosa_laevigata RLG00000034644
rosa_multiflora Rmu_sc0016686.1_g000002 Rmu_sc0020783.1_g000001
rosa_roxburghii Rroxscaffold_1G00031680
rosa_rugosa Rorug05G0250800 Rorug05G0250800 Rorug05G0250900
rosa_samantha Rh5AG326900 Rh5BG338000 Rh5CG362600 Rh5DG350200
rosa_wichuraiana Rw0G018430 Rw5G030880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 662
AccB7I CCANNNNNTGG 1 cut(s) 950
AccBSI CCGCTC 1 cut(s) 342
AccII CGCG 1 cut(s) 43
AciI CCGC 5 cut(s) 340, 1523, 1678, 1750, 1808
AclWI GGATC 2 cut(s) 1470, 1754
AcsI RAATTY 4 cut(s) 346, 823, 999, 1471
AcuI CTGAAG 1 cut(s) 1322
AcyI GRCGYC 1 cut(s) 845
AfaI GTAC 3 cut(s) 406, 887, 1205
AfiI CCNNNNNNNGG 5 cut(s) 302, 603, 950, 1378, 1432
AflIII ACRYGT 1 cut(s) 407
AgsI TTSAA 8 cut(s) 80, 178, 785, 821, 1005, 1024, 1603, 1841
AjnI CCWGG 4 cut(s) 358, 943, 1345, 1639
AjuI GAANNNNNNNTTGG 2 cut(s) 777, 809
AloI GAACNNNNNNTCC 2 cut(s) 375, 407
Alw21I GWGCWC 3 cut(s) 1182, 1532, 1712
Alw26I GTCTC 1 cut(s) 1153
Alw44I GTGCAC 3 cut(s) 1178, 1528, 1708
AlwI GGATC 2 cut(s) 1470, 1754
Ama87I CYCGRG 1 cut(s) 895
AoxI GGCC 8 cut(s) 424, 480, 592, 649, 689, 1160, 1409, 1497
ApaLI GTGCAC 3 cut(s) 1178, 1528, 1708
ApeKI GCWGC 8 cut(s) 224, 400, 680, 683, 805, 1100, 1654, 1747
ApoI RAATTY 4 cut(s) 346, 823, 999, 1471
Asp700I GAANNNNTTC 3 cut(s) 259, 426, 1221
AspLEI GCGC 2 cut(s) 43, 400
AspS9I GGNCC 4 cut(s) 593, 650, 1498, 1791
AsuC2I CCSGG 3 cut(s) 598, 896, 897
AsuHPI GGTGA 5 cut(s) 546, 965, 1226, 1637, 1655
AsuII TTCGAA 1 cut(s) 1132
AvaI CYCGRG 1 cut(s) 895
AvaII GGWCC 1 cut(s) 1791
BaeGI GKGCMC 3 cut(s) 1182, 1532, 1712
BaeI ACNNNNGTAYC 2 cut(s) 883, 916
Bbv12I GWGCWC 3 cut(s) 1182, 1532, 1712
BbvI GCAGC 8 cut(s) 236, 412, 667, 670, 792, 1087, 1666, 1759
BccI CCATC 4 cut(s) 458, 1192, 1691, 1737
BceAI ACGGC 1 cut(s) 1046
BciT130I CCWGG 4 cut(s) 360, 945, 1347, 1641
BcnI CCSGG 3 cut(s) 598, 896, 897
BcoDI GTCTC 1 cut(s) 1153
BfaI CTAG 1 cut(s) 539
BfmI CTRYAG 2 cut(s) 990, 1049
BglII AGATCT 1 cut(s) 694
BisI GCNGC 9 cut(s) 225, 401, 681, 684, 806, 1101, 1655, 1679, 1748
BlsI GCNGC 9 cut(s) 226, 402, 682, 685, 807, 1102, 1656, 1680, 1749
Bme1390I CCNGG 7 cut(s) 360, 598, 896, 897, 945, 1347, 1641
Bme18I GGWCC 1 cut(s) 1791
BmeT110I CYCGRG 1 cut(s) 895
BmgT120I GGNCC 4 cut(s) 593, 650, 1498, 1791
BmiI GGNNCC 4 cut(s) 595, 837, 1288, 1383
BmrFI CCNGG 7 cut(s) 360, 598, 896, 897, 945, 1347, 1641
BmrI ACTGGG 2 cut(s) 235, 1822
BmsI GCATC 5 cut(s) 1296, 1351, 1618, 1645, 1767
BmuI ACTGGG 2 cut(s) 235, 1822
BpmI CTGGAG 2 cut(s) 524, 732
Bpu14I TTCGAA 1 cut(s) 1132
BpuEI CTTGAG 6 cut(s) 746, 846, 866, 1265, 1685, 1757
BpuMI CCSGG 3 cut(s) 598, 896, 897
BsaHI GRCGYC 1 cut(s) 845
BsaJI CCNNGG 5 cut(s) 589, 596, 895, 1157, 1173
BsaXI ACNNNNNCTCC 4 cut(s) 375, 405, 730, 760
Bsc4I CCNNNNNNNGG 5 cut(s) 302, 603, 950, 1378, 1432
Bse118I RCCGGY 1 cut(s) 99
Bse1I ACTGG 4 cut(s) 241, 642, 1698, 1817
Bse3DI GCAATG 3 cut(s) 1258, 1708, 1848
BseBI CCWGG 4 cut(s) 360, 945, 1347, 1641
BseDI CCNNGG 5 cut(s) 589, 596, 895, 1157, 1173
BseGI GGATG 7 cut(s) 940, 1011, 1045, 1342, 1636, 1702, 1748
BseLI CCNNNNNNNGG 5 cut(s) 302, 603, 950, 1378, 1432
BseMI GCAATG 3 cut(s) 1258, 1708, 1848
BseMII CTCAG 1 cut(s) 1292
BseNI ACTGG 4 cut(s) 241, 642, 1698, 1817
BseSI GKGCMC 3 cut(s) 1182, 1532, 1712
BseXI GCAGC 8 cut(s) 236, 412, 667, 670, 792, 1087, 1666, 1759
BseYI CCCAGC 1 cut(s) 652
BsgI GTGCAG 3 cut(s) 243, 432, 1086
Bsh1236I CGCG 1 cut(s) 43
BshFI GGCC 8 cut(s) 426, 482, 594, 651, 691, 1162, 1411, 1499
BsiHKAI GWGCWC 3 cut(s) 1182, 1532, 1712
BsiHKCI CYCGRG 1 cut(s) 895
BsiSI CCGG 3 cut(s) 100, 598, 896
BsiWI CGTACG 1 cut(s) 1203
BslFI GGGAC 2 cut(s) 1625, 1807
BslI CCNNNNNNNGG 5 cut(s) 302, 603, 950, 1378, 1432
BsmAI GTCTC 1 cut(s) 1153
BsmFI GGGAC 2 cut(s) 1625, 1807
BsnI GGCC 8 cut(s) 426, 482, 594, 651, 691, 1162, 1411, 1499
BsoBI CYCGRG 1 cut(s) 895
Bsp119I TTCGAA 1 cut(s) 1132
Bsp1286I GDGCHC 3 cut(s) 1182, 1532, 1712
Bsp143I GATC 8 cut(s) 67, 694, 906, 1084, 1136, 1281, 1462, 1759
BspACI CCGC 5 cut(s) 340, 1523, 1678, 1750, 1808
BspANI GGCC 8 cut(s) 426, 482, 594, 651, 691, 1162, 1411, 1499
BspCNI CTCAG 1 cut(s) 1291
BspFNI CGCG 1 cut(s) 43
BspLI GGNNCC 4 cut(s) 595, 837, 1288, 1383
BspPI GGATC 2 cut(s) 1470, 1754
BspT104I TTCGAA 1 cut(s) 1132
BsrBI CCGCTC 1 cut(s) 342
BsrDI GCAATG 3 cut(s) 1258, 1708, 1848
BsrFI RCCGGY 1 cut(s) 99
BsrI ACTGG 4 cut(s) 241, 642, 1698, 1817
BssAI RCCGGY 1 cut(s) 99
BssECI CCNNGG 5 cut(s) 589, 596, 895, 1157, 1173
BssMI GATC 8 cut(s) 67, 694, 906, 1084, 1136, 1281, 1462, 1759
BssNI GRCGYC 1 cut(s) 845
BssT1I CCWWGG 2 cut(s) 1157, 1173
Bst2UI CCWGG 4 cut(s) 360, 945, 1347, 1641
Bst4CI ACNGT 4 cut(s) 76, 558, 1511, 1714
Bst6I CTCTTC 1 cut(s) 704
BstACI GRCGYC 1 cut(s) 845
BstAPI GCANNNNNTGC 3 cut(s) 221, 1660, 1707
BstBI TTCGAA 1 cut(s) 1132
BstC8I GCNNGC 3 cut(s) 649, 803, 1652
BstDEI CTNAG 3 cut(s) 1278, 1455, 1535
BstF5I GGATG 7 cut(s) 940, 1011, 1045, 1342, 1636, 1702, 1748
BstFNI CGCG 1 cut(s) 43
BstHHI GCGC 2 cut(s) 43, 400
BstKTI GATC 8 cut(s) 70, 697, 909, 1087, 1139, 1284, 1465, 1762
BstMAI GTCTC 1 cut(s) 1153
BstMBI GATC 8 cut(s) 67, 694, 906, 1084, 1136, 1281, 1462, 1759
BstMWI GCNNNNNNNGC 7 cut(s) 221, 245, 653, 1660, 1675, 1707, 1814
BstNI CCWGG 4 cut(s) 360, 945, 1347, 1641
BstNSI RCATGY 5 cut(s) 94, 239, 411, 1342, 1654
BstSCI CCNGG 7 cut(s) 358, 596, 894, 895, 943, 1345, 1639
BstSFI CTRYAG 2 cut(s) 990, 1049
BstSLI GKGCMC 3 cut(s) 1182, 1532, 1712
BstUI CGCG 1 cut(s) 43
BstV1I GCAGC 8 cut(s) 236, 412, 667, 670, 792, 1087, 1666, 1759
BstX2I RGATCY 1 cut(s) 694
BstXI CCANNNNNNTGG 1 cut(s) 13
BstYI RGATCY 1 cut(s) 694
BsuRI GGCC 8 cut(s) 426, 482, 594, 651, 691, 1162, 1411, 1499
BtsCI GGATG 7 cut(s) 940, 1011, 1045, 1342, 1636, 1702, 1748
BtsIMutI CAGTG 1 cut(s) 635
Cac8I GCNNGC 3 cut(s) 649, 803, 1652
CfoI GCGC 2 cut(s) 43, 400
Cfr10I RCCGGY 1 cut(s) 99
Cfr13I GGNCC 4 cut(s) 593, 650, 1498, 1791
Cfr9I CCCGGG 1 cut(s) 895
CseI GACGC 1 cut(s) 834
Csp6I GTAC 3 cut(s) 405, 886, 1204
CviQI GTAC 3 cut(s) 405, 886, 1204
DdeI CTNAG 3 cut(s) 1278, 1455, 1535
DpnI GATC 8 cut(s) 69, 696, 908, 1086, 1138, 1283, 1464, 1761
DpnII GATC 8 cut(s) 67, 694, 906, 1084, 1136, 1281, 1462, 1759
Eam1104I CTCTTC 1 cut(s) 704
EarI CTCTTC 1 cut(s) 704
EciI GGCGGA 1 cut(s) 1823
Eco130I CCWWGG 2 cut(s) 1157, 1173
Eco147I AGGCCT 3 cut(s) 426, 1162, 1411
Eco47I GGWCC 1 cut(s) 1791
Eco57I CTGAAG 1 cut(s) 1322
Eco88I CYCGRG 1 cut(s) 895
EcoRII CCWGG 4 cut(s) 358, 943, 1345, 1639
EcoT14I CCWWGG 2 cut(s) 1157, 1173
EcoT22I ATGCAT 3 cut(s) 1344, 1638, 1782
ErhI CCWWGG 2 cut(s) 1157, 1173
FaqI GGGAC 2 cut(s) 1625, 1807
FauI CCCGC 1 cut(s) 347
FauNDI CATATG 1 cut(s) 19
Fnu4HI GCNGC 9 cut(s) 225, 401, 681, 684, 806, 1101, 1655, 1679, 1748
FokI GGATG 7 cut(s) 927, 998, 1052, 1329, 1623, 1709, 1755
Fsp4HI GCNGC 9 cut(s) 225, 401, 681, 684, 806, 1101, 1655, 1679, 1748
FspBI CTAG 1 cut(s) 539
GlaI GCGC 2 cut(s) 42, 399
GluI GCNGC 9 cut(s) 225, 401, 681, 684, 806, 1101, 1655, 1679, 1748
GsaI CCCAGC 1 cut(s) 656
GsuI CTGGAG 2 cut(s) 524, 732
HaeIII GGCC 8 cut(s) 426, 482, 594, 651, 691, 1162, 1411, 1499
HapII CCGG 3 cut(s) 100, 598, 896
HgaI GACGC 1 cut(s) 834
HhaI GCGC 2 cut(s) 43, 400
Hin1I GRCGYC 1 cut(s) 845
Hin6I GCGC 2 cut(s) 41, 398
HinP1I GCGC 2 cut(s) 41, 398
HindIII AAGCTT 1 cut(s) 257
HinfI GANTC 5 cut(s) 584, 1111, 1613, 1820, 1845
HpaII CCGG 3 cut(s) 100, 598, 896
HphI GGTGA 5 cut(s) 546, 965, 1226, 1637, 1655
Hpy166II GTNNAC 3 cut(s) 1180, 1530, 1710
Hpy188I TCNGA 5 cut(s) 527, 903, 1281, 1286, 1364
Hpy188III TCNNGA 7 cut(s) 6, 503, 849, 1505, 1545, 1736, 1763
Hpy8I GTNNAC 3 cut(s) 1180, 1530, 1710
Hpy99I CGWCG 2 cut(s) 850, 1238
HpyAV CCTTC 7 cut(s) 301, 416, 437, 1026, 1511, 1616, 1835
HpyCH4III ACNGT 4 cut(s) 76, 558, 1511, 1714
HpyCH4IV ACGT 2 cut(s) 1202, 1233
HpyF10VI GCNNNNNNNGC 7 cut(s) 221, 245, 653, 1660, 1675, 1707, 1814
HpyF3I CTNAG 3 cut(s) 1278, 1455, 1535
HpySE526I ACGT 2 cut(s) 1202, 1233
Hsp92I GRCGYC 1 cut(s) 845
HspAI GCGC 2 cut(s) 41, 398
Kzo9I GATC 8 cut(s) 67, 694, 906, 1084, 1136, 1281, 1462, 1759
LmnI GCTCC 3 cut(s) 88, 361, 751
Lsp1109I GCAGC 8 cut(s) 236, 412, 667, 670, 792, 1087, 1666, 1759
LweI GCATC 5 cut(s) 1296, 1351, 1618, 1645, 1767
MaeI CTAG 1 cut(s) 539
MaeII ACGT 2 cut(s) 1202, 1233
MaeIII GTNAC 8 cut(s) 49, 56, 570, 1074, 1366, 1505, 1643, 1720
MalI GATC 8 cut(s) 69, 696, 908, 1086, 1138, 1283, 1464, 1761
MbiI CCGCTC 1 cut(s) 342
MboI GATC 8 cut(s) 67, 694, 906, 1084, 1136, 1281, 1462, 1759
MboII GAAGA 4 cut(s) 691, 916, 1146, 1315
MfeI CAATTG 1 cut(s) 1658
MflI RGATCY 1 cut(s) 694
MhlI GDGCHC 3 cut(s) 1182, 1532, 1712
MlyI GAGTC 4 cut(s) 1120, 1607, 1829, 1839
MmeI TCCRAC 2 cut(s) 361, 455
Mph1103I ATGCAT 3 cut(s) 1344, 1638, 1782
MroXI GAANNNNTTC 3 cut(s) 259, 426, 1221
MseI TTAA 4 cut(s) 579, 930, 1488, 1803
MslI CAYNNNNRTG 2 cut(s) 945, 1641
MspA1I CMGCKG 1 cut(s) 1750
MspI CCGG 3 cut(s) 100, 598, 896
MspR9I CCNGG 7 cut(s) 360, 598, 896, 897, 945, 1347, 1641
MunI CAATTG 1 cut(s) 1658
MvaI CCWGG 4 cut(s) 360, 945, 1347, 1641
MvnI CGCG 1 cut(s) 43
MwoI GCNNNNNNNGC 7 cut(s) 221, 245, 653, 1660, 1675, 1707, 1814
NciI CCSGG 3 cut(s) 598, 896, 897
NdeI CATATG 1 cut(s) 19
NdeII GATC 8 cut(s) 67, 694, 906, 1084, 1136, 1281, 1462, 1759
NlaIV GGNNCC 4 cut(s) 595, 837, 1288, 1383
NmeAIII GCCGAG 1 cut(s) 570
NmuCI GTSAC 4 cut(s) 570, 1074, 1505, 1643
NsiI ATGCAT 3 cut(s) 1344, 1638, 1782
NspI RCATGY 5 cut(s) 94, 239, 411, 1342, 1654
NspV TTCGAA 1 cut(s) 1132
PaeI GCATGC 1 cut(s) 1654
PceI AGGCCT 3 cut(s) 426, 1162, 1411
PciI ACATGT 1 cut(s) 407
PcsI WCGNNNNNNNCGW 3 cut(s) 313, 400, 1203
PdmI GAANNNNTTC 3 cut(s) 259, 426, 1221
PfeI GAWTC 1 cut(s) 584
Pfl23II CGTACG 1 cut(s) 1203
PflMI CCANNNNNTGG 1 cut(s) 950
PfoI TCCNGGA 1 cut(s) 1345
PkrI GCNGC 9 cut(s) 226, 402, 682, 685, 807, 1102, 1656, 1680, 1749
PleI GAGTC 4 cut(s) 1119, 1607, 1828, 1839
PpsI GAGTC 4 cut(s) 1119, 1607, 1828, 1839
PscI ACATGT 1 cut(s) 407
PsiI TTATAA 1 cut(s) 662
Psp6I CCWGG 4 cut(s) 358, 943, 1345, 1639
PspFI CCCAGC 1 cut(s) 652
PspGI CCWGG 4 cut(s) 358, 943, 1345, 1639
PspLI CGTACG 1 cut(s) 1203
PspN4I GGNNCC 4 cut(s) 595, 837, 1288, 1383
PspPI GGNCC 4 cut(s) 593, 650, 1498, 1791
PsuI RGATCY 1 cut(s) 694
RsaI GTAC 3 cut(s) 406, 887, 1205
RsaNI GTAC 3 cut(s) 405, 886, 1204
RseI CAYNNNNRTG 2 cut(s) 945, 1641
SaqAI TTAA 4 cut(s) 579, 930, 1488, 1803
SatI GCNGC 9 cut(s) 225, 401, 681, 684, 806, 1101, 1655, 1679, 1748
Sau3AI GATC 8 cut(s) 67, 694, 906, 1084, 1136, 1281, 1462, 1759
Sau96I GGNCC 4 cut(s) 593, 650, 1498, 1791
SchI GAGTC 4 cut(s) 1120, 1607, 1829, 1839
ScrFI CCNGG 7 cut(s) 360, 598, 896, 897, 945, 1347, 1641
SduI GDGCHC 3 cut(s) 1182, 1532, 1712
SfaNI GCATC 5 cut(s) 1296, 1351, 1618, 1645, 1767
SfcI CTRYAG 2 cut(s) 990, 1049
SfuI TTCGAA 1 cut(s) 1132
SinI GGWCC 1 cut(s) 1791
SmaI CCCGGG 1 cut(s) 897
SmiMI CAYNNNNRTG 2 cut(s) 945, 1641
SmlI CTYRAG 6 cut(s) 725, 861, 881, 1244, 1664, 1736
SmoI CTYRAG 6 cut(s) 725, 861, 881, 1244, 1664, 1736
SphI GCATGC 1 cut(s) 1654
SseBI AGGCCT 3 cut(s) 426, 1162, 1411
SsiI CCGC 5 cut(s) 340, 1523, 1678, 1750, 1808
SspI AATATT 2 cut(s) 816, 1354
SspMI CTAG 1 cut(s) 539
StuI AGGCCT 3 cut(s) 426, 1162, 1411
StyD4I CCNGG 7 cut(s) 358, 596, 894, 895, 943, 1345, 1639
StyI CCWWGG 2 cut(s) 1157, 1173
TaaI ACNGT 4 cut(s) 76, 558, 1511, 1714
TaiI ACGT 2 cut(s) 1205, 1236
TaqI TCGA 6 cut(s) 307, 1132, 1139, 1197, 1236, 1465
TatI WGTACW 1 cut(s) 885
TauI GCSGC 1 cut(s) 1681
TfiI GAWTC 1 cut(s) 584
Tru1I TTAA 4 cut(s) 579, 930, 1488, 1803
Tru9I TTAA 4 cut(s) 579, 930, 1488, 1803
TscAI CASTG 1 cut(s) 642
TseFI GTSAC 4 cut(s) 570, 1074, 1505, 1643
TseI GCWGC 8 cut(s) 224, 400, 680, 683, 805, 1100, 1654, 1747
Tsp45I GTSAC 4 cut(s) 570, 1074, 1505, 1643
TspDTI ATGAA 9 cut(s) 443, 608, 617, 857, 1000, 1056, 1254, 1269, 1319
TspGWI ACGGA 1 cut(s) 1804
TspMI CCCGGG 1 cut(s) 895
TspRI CASTG 1 cut(s) 642
Van91I CCANNNNNTGG 1 cut(s) 950
VneI GTGCAC 3 cut(s) 1178, 1528, 1708
VpaK11BI GGWCC 1 cut(s) 1791
XapI RAATTY 4 cut(s) 346, 823, 999, 1471
XceI RCATGY 5 cut(s) 94, 239, 411, 1342, 1654
XmaI CCCGGG 1 cut(s) 895
XmnI GAANNNNTTC 3 cut(s) 259, 426, 1221
XspI CTAG 1 cut(s) 539
Zsp2I ATGCAT 3 cut(s) 1344, 1638, 1782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.