Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0006376

Physical Location & Seq

Genomic Coordinates Forward (+)

35536277 .. 35539326

Gene Structure 3050 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1244600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGAAAAATGGAGATGTAGCTTTTGATAAACCAAAGTTACTTCGTCTTACTCAATTTTATCCTCAAGACTTTTCGGATGAAGATCGTTTGACACTTGAAGATCAACTTGAGATTTATATTCATTATGTGTGTTCCAGTAGTGATTTCTCTCAATTGGAAGGGATTGGTGATCTTGCAAAAAAAATGGTGGAGACAAGGATGCATCAAGTATTCAATTATGTATATTTGCTCATTACATTGTCTTTAGTTTTACCAGTTGCAACTGCTTCAGTGGAGATAGCATTTTCTGTCATGAATATTGTTAAGGGTCCACCACTTAGGAACAAAATGGGAGATCAATGGTTGAGTGATAGCTTGCTTGTTTATATTGAGAGATATATTTTTGCTTGTATTGAAAATGAAGCTATAATGCTTCGTTTTCAAAGTATGAAATCTCGTCGTGGACAATTATACCTCGGGGAATGTCGAGCTCTGGAACAAAACTTGGGAGTTCTTTTGGTAAACTTCTTTGATTTTTATGGACGCAAATTGAACACTTCAGATGTTGGTGTATCGTGTAACGGAGCAGGCACCTTTTTTAAAAAGAGTGTTAAAGGGTTCAGAAGCAATGGACGACCCTTTCTTCTAGCCATCGAGGACCCCCAGGCACCGGAAAATGACGTCGGGAAGAGCTCCTTCAACTATTTTCAGATTAGATCAGCTTTTTCAATGGCGTACGCTACATTGACAAACCCTAAGGTCATCATGTGCCTAGGGCCAAACAGGAGCATTCTCGGTACCATAATTAGGCCTGATTCGACATTGGTGGAACGCAAAGGAGGGCCTGGAATGGTAACTTTTAATAGCTTGCTTCCTGGAGCAGGGGAGCCAGTTCAGCTAGAGCATGATGATCAGGAGTTACCAGGCAATTGGCAGTTAGATGATGAAGATGATCCCCTGCCGCGGGGACATGATTCTGCTGCAGGTGACAGTGGGCAATCATCAGGAAAGAAGAGGAAAGCTTCATTTAAAGAGAAGTCAAGTAAGAAGGGAAAAGAAAATGGGGAGGTGGGGAAGAAGATCAGATATGAAGAAAATGGCTCAAGGCGAGAGAAGAGCGGGCATGAGGAAAATGGCTCAAGGAAAGACAAGGGGAAAAAGAAGATGAGGAGGCAGAGACATTCCCAAGATATTGCCAATAGTTTTGGTCCTTATGGTGGTGCATGGACTCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000956 GO:0003674 GO:0003824 GO:0004652 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008334 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010586 GO:0010587 GO:0010605 GO:0010629 GO:0010639 GO:0016070 GO:0016071 GO:0016074 GO:0016740 GO:0016772 GO:0016779 GO:0019219 GO:0019222 GO:0019439 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0033043 GO:0033044 GO:0033500 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042592 GO:0043144 GO:0043170 GO:0043628 GO:0043629 GO:0043630 GO:0043631 GO:0043632 GO:0043633 GO:0043634 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045934 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0065008 GO:0070566 GO:0071044 GO:0071050 GO:0071704 GO:0080090 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1904356 GO:1904357 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

NTP_transf_2 PAP_assoc

Protein Analysis

405

Amino Acids

45.35

Weight (kDa)

8.85

Isoelectric Point (pI)

47.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAP_assoc	PF03828	161 - 219	1.1e-15	Cid1 family poly A polymerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53770
fragaria_vesca	FvH4_3g20190 FvH4_3g20190 FvH4_3g20190 FvH4_3g20190 FvH4_3g20190
malus_domestica	MD01G1239400.v1.1 MD03G1226500.v1.1 MD05G1272800.v1.1 MD08G1067800.v1.1 MD10G1025000.v1.1 MD11G1244500.v1.1 MD11G1244600.v1.1
prunus_persica	Prupe.4G182900_v2.0.a1
pyrus_communis	pycom03g17420
rosa_chinensis	RchiOBHm_Chr5g0034001
rosa_laevigata	RLG00000033518
rosa_multiflora	Rmu_sc0012341.1_g000005 Rmu_sc0014753.1_g000002
rosa_roxburghii	Rroxscaffold_1G00046230
rosa_rugosa	Rorug05G0144100
rosa_samantha	Rh5AG235000 Rh5BG235800 Rh5CG265600 Rh5DG242200
rosa_wichuraiana	Rw5G021220 Rw5G021460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	953
AatII	GACGTC	1 cut(s)	663
Acc36I	ACCTGC	1 cut(s)	953
Acc65I	GGTACC	1 cut(s)	776
AccB1I	GGYRCC	3 cut(s)	569, 646, 776
AccBSI	CCGCTC	1 cut(s)	1098
AccII	CGCG	1 cut(s)	943
AciI	CCGC	3 cut(s)	941, 943, 1098
AclWI	GGATC	1 cut(s)	926
AcuI	CTGAAG	2 cut(s)	252, 522
AcyI	GRCGYC	1 cut(s)	660
AfaI	GTAC	2 cut(s)	716, 778
AfiI	CCNNNNNNNGG	6 cut(s)	649, 786, 860, 942, 943, 1196
AgsI	TTSAA	7 cut(s)	98, 214, 395, 422, 532, 679, 708
AjnI	CCWGG	4 cut(s)	642, 823, 853, 901
AluBI	AGCT	9 cut(s)	20, 354, 404, 470, 672, 701, 846, 877, 1001
AluI	AGCT	9 cut(s)	20, 354, 404, 470, 672, 701, 846, 877, 1001
Alw21I	GWGCWC	2 cut(s)	472, 674
Alw26I	GTCTC	2 cut(s)	185, 1150
AlwI	GGATC	1 cut(s)	926
Ama87I	CYCGRG	1 cut(s)	455
AoxI	GGCC	3 cut(s)	755, 788, 821
ApeKI	GCWGC	1 cut(s)	959
Asp718I	GGTACC	1 cut(s)	776
AspA2I	CCTAGG	1 cut(s)	751
AspS9I	GGNCC	5 cut(s)	308, 637, 755, 821, 1187
AsuHPI	GGTGA	2 cut(s)	179, 977
AvaI	CYCGRG	1 cut(s)	455
AvaII	GGWCC	3 cut(s)	308, 637, 1187
AvrII	CCTAGG	1 cut(s)	751
AxyI	CCTNAGG	1 cut(s)	735
BanI	GGYRCC	3 cut(s)	569, 646, 776
BanII	GRGCYC	2 cut(s)	472, 674
Bbv12I	GWGCWC	2 cut(s)	472, 674
BbvI	GCAGC	1 cut(s)	946
BccI	CCATC	1 cut(s)	638
BciT130I	CCWGG	4 cut(s)	644, 825, 855, 903
BclI	TGATCA	1 cut(s)	889
BcoDI	GTCTC	2 cut(s)	185, 1150
BfaI	CTAG	3 cut(s)	626, 752, 878
BfmI	CTRYAG	1 cut(s)	960
BfuAI	ACCTGC	1 cut(s)	953
BisI	GCNGC	2 cut(s)	941, 960
BlnI	CCTAGG	1 cut(s)	751
BlsI	GCNGC	2 cut(s)	942, 961
Bme1390I	CCNGG	4 cut(s)	644, 825, 855, 903
Bme18I	GGWCC	3 cut(s)	308, 637, 1187
BmeT110I	CYCGRG	1 cut(s)	455
BmgT120I	GGNCC	5 cut(s)	308, 637, 755, 821, 1187
BmiI	GGNNCC	6 cut(s)	309, 571, 639, 648, 778, 867
BmrFI	CCNGG	4 cut(s)	644, 825, 855, 903
BmsI	GCATC	2 cut(s)	189, 211
BpmI	CTGGAG	1 cut(s)	876
BpuEI	CTTGAG	4 cut(s)	48, 128, 1066, 1102
BsaBI	GATNNNNATC	1 cut(s)	81
BsaHI	GRCGYC	1 cut(s)	660
BsaJI	CCNNGG	4 cut(s)	454, 642, 751, 941
BsaWI	WCCGGW	1 cut(s)	649
Bsc4I	CCNNNNNNNGG	6 cut(s)	649, 786, 860, 942, 943, 1196
Bse1I	ACTGG	3 cut(s)	135, 254, 869
Bse21I	CCTNAGG	1 cut(s)	735
Bse3DI	GCAATG	1 cut(s)	613
Bse8I	GATNNNNATC	1 cut(s)	81
BseBI	CCWGG	4 cut(s)	644, 825, 855, 903
BseDI	CCNNGG	4 cut(s)	454, 642, 751, 941
BseGI	GGATG	2 cut(s)	82, 204
BseJI	GATNNNNATC	1 cut(s)	81
BseLI	CCNNNNNNNGG	6 cut(s)	649, 786, 860, 942, 943, 1196
BseMI	GCAATG	1 cut(s)	613
BseNI	ACTGG	3 cut(s)	135, 254, 869
BseRI	GAGGAG	1 cut(s)	1162
BseXI	GCAGC	1 cut(s)	946
Bsh1236I	CGCG	1 cut(s)	943
BshFI	GGCC	3 cut(s)	757, 790, 823
BshNI	GGYRCC	3 cut(s)	569, 646, 776
BsiHKAI	GWGCWC	2 cut(s)	472, 674
BsiHKCI	CYCGRG	1 cut(s)	455
BsiSI	CCGG	1 cut(s)	650
BsiWI	CGTACG	1 cut(s)	714
BslFI	GGGAC	1 cut(s)	960
BslI	CCNNNNNNNGG	6 cut(s)	649, 786, 860, 942, 943, 1196
BsmAI	GTCTC	2 cut(s)	185, 1150
BsmFI	GGGAC	1 cut(s)	960
BsmI	GAATGC	1 cut(s)	768
BsnI	GGCC	3 cut(s)	757, 790, 823
BsoBI	CYCGRG	1 cut(s)	455
Bsp1286I	GDGCHC	2 cut(s)	472, 674
Bsp143I	GATC	8 cut(s)	82, 100, 169, 334, 695, 889, 931, 1059
BspACI	CCGC	3 cut(s)	941, 943, 1098
BspANI	GGCC	3 cut(s)	757, 790, 823
BspFNI	CGCG	1 cut(s)	943
BspHI	TCATGA	1 cut(s)	291
BspLI	GGNNCC	6 cut(s)	309, 571, 639, 648, 778, 867
BspMAI	CTGCAG	1 cut(s)	964
BspMI	ACCTGC	1 cut(s)	953
BspPI	GGATC	1 cut(s)	926
BspQI	GCTCTTC	2 cut(s)	662, 1088
BspT107I	GGYRCC	3 cut(s)	569, 646, 776
BsrBI	CCGCTC	1 cut(s)	1098
BsrDI	GCAATG	1 cut(s)	613
BsrI	ACTGG	3 cut(s)	135, 254, 869
BssECI	CCNNGG	4 cut(s)	454, 642, 751, 941
BssMI	GATC	8 cut(s)	82, 100, 169, 334, 695, 889, 931, 1059
BssNI	GRCGYC	1 cut(s)	660
BssT1I	CCWWGG	1 cut(s)	751
Bst2UI	CCWGG	4 cut(s)	644, 825, 855, 903
Bst4CI	ACNGT	1 cut(s)	971
Bst6I	CTCTTC	3 cut(s)	662, 986, 1088
BstACI	GRCGYC	1 cut(s)	660
BstC8I	GCNNGC	4 cut(s)	356, 568, 848, 1100
BstDEI	CTNAG	2 cut(s)	317, 735
BstDSI	CCRYGG	1 cut(s)	941
BstENI	CCTNNNNNAGG	1 cut(s)	858
BstF5I	GGATG	2 cut(s)	82, 204
BstFNI	CGCG	1 cut(s)	943
BstKTI	GATC	8 cut(s)	85, 103, 172, 337, 698, 892, 934, 1062
BstMAI	GTCTC	2 cut(s)	185, 1150
BstMBI	GATC	8 cut(s)	82, 100, 169, 334, 695, 889, 931, 1059
BstMWI	GCNNNNNNNGC	1 cut(s)	874
BstNI	CCWGG	4 cut(s)	644, 825, 855, 903
BstSCI	CCNGG	4 cut(s)	642, 823, 853, 901
BstSFI	CTRYAG	1 cut(s)	960
BstUI	CGCG	1 cut(s)	943
BstV1I	GCAGC	1 cut(s)	946
BstXI	CCANNNNNNTGG	1 cut(s)	909
Bsu36I	CCTNAGG	1 cut(s)	735
BsuRI	GGCC	3 cut(s)	757, 790, 823
BtgI	CCRYGG	1 cut(s)	941
BtsCI	GGATG	2 cut(s)	82, 204
BtsIMutI	CAGTG	2 cut(s)	276, 976
BveI	ACCTGC	1 cut(s)	953
Cac8I	GCNNGC	4 cut(s)	356, 568, 848, 1100
CciI	TCATGA	1 cut(s)	291
Cfr13I	GGNCC	5 cut(s)	308, 637, 755, 821, 1187
Cfr42I	CCGCGG	1 cut(s)	944
CseI	GACGC	1 cut(s)	531
Csp6I	GTAC	2 cut(s)	715, 777
CviAII	CATG	6 cut(s)	292, 745, 884, 950, 1103, 1203
CviQI	GTAC	2 cut(s)	715, 777
DdeI	CTNAG	2 cut(s)	317, 735
DpnI	GATC	8 cut(s)	84, 102, 171, 336, 697, 891, 933, 1061
DpnII	GATC	8 cut(s)	82, 100, 169, 334, 695, 889, 931, 1059
DraI	TTTAAA	2 cut(s)	580, 1009
Eam1104I	CTCTTC	3 cut(s)	662, 986, 1088
EarI	CTCTTC	3 cut(s)	662, 986, 1088
Ecl136II	GAGCTC	2 cut(s)	470, 672
Eco130I	CCWWGG	1 cut(s)	751
Eco147I	AGGCCT	1 cut(s)	790
Eco24I	GRGCYC	2 cut(s)	472, 674
Eco47I	GGWCC	3 cut(s)	308, 637, 1187
Eco53kI	GAGCTC	2 cut(s)	470, 672
Eco57I	CTGAAG	2 cut(s)	252, 522
Eco81I	CCTNAGG	1 cut(s)	735
Eco88I	CYCGRG	1 cut(s)	455
EcoICRI	GAGCTC	2 cut(s)	470, 672
EcoNI	CCTNNNNNAGG	1 cut(s)	858
EcoO109I	RGGNCCY	2 cut(s)	637, 821
EcoRII	CCWGG	4 cut(s)	642, 823, 853, 901
EcoT14I	CCWWGG	1 cut(s)	751
EcoT22I	ATGCAT	1 cut(s)	204
EcoT38I	GRGCYC	2 cut(s)	472, 674
ErhI	CCWWGG	1 cut(s)	751
FaeI	CATG	6 cut(s)	295, 748, 887, 953, 1106, 1206
FalI	AAGNNNNNCTT	4 cut(s)	90, 122, 659, 691
FaqI	GGGAC	1 cut(s)	960
FatI	CATG	6 cut(s)	291, 744, 883, 949, 1102, 1202
FauI	CCCGC	2 cut(s)	936, 1091
FbaI	TGATCA	1 cut(s)	889
Fnu4HI	GCNGC	2 cut(s)	941, 960
FokI	GGATG	2 cut(s)	89, 211
FriOI	GRGCYC	2 cut(s)	472, 674
Fsp4HI	GCNGC	2 cut(s)	941, 960
FspBI	CTAG	3 cut(s)	626, 752, 878
GluI	GCNGC	2 cut(s)	941, 960
GsuI	CTGGAG	1 cut(s)	876
HaeIII	GGCC	3 cut(s)	757, 790, 823
HapII	CCGG	1 cut(s)	650
HgaI	GACGC	1 cut(s)	531
Hin1I	GRCGYC	1 cut(s)	660
Hin1II	CATG	6 cut(s)	295, 748, 887, 953, 1106, 1206
HindIII	AAGCTT	1 cut(s)	999
HinfI	GANTC	3 cut(s)	794, 953, 1207
HpaII	CCGG	1 cut(s)	650
HphI	GGTGA	2 cut(s)	179, 977
Hpy166II	GTNNAC	3 cut(s)	311, 443, 502
Hpy188I	TCNGA	5 cut(s)	76, 541, 602, 690, 1064
Hpy188III	TCNNGA	6 cut(s)	65, 292, 473, 664, 893, 984
Hpy8I	GTNNAC	3 cut(s)	311, 443, 502
Hpy99I	CGWCG	2 cut(s)	441, 665
HpyAV	CCTTC	3 cut(s)	152, 685, 1021
HpyCH4III	ACNGT	1 cut(s)	971
HpyCH4IV	ACGT	1 cut(s)	660
HpyCH4V	TGCA	5 cut(s)	176, 202, 260, 962, 1202
HpyF10VI	GCNNNNNNNGC	1 cut(s)	874
HpyF3I	CTNAG	2 cut(s)	317, 735
HpySE526I	ACGT	1 cut(s)	660
Hsp92I	GRCGYC	1 cut(s)	660
Hsp92II	CATG	6 cut(s)	295, 748, 887, 953, 1106, 1206
KpnI	GGTACC	1 cut(s)	780
Ksp22I	TGATCA	1 cut(s)	889
KspI	CCGCGG	1 cut(s)	944
Kzo9I	GATC	8 cut(s)	82, 100, 169, 334, 695, 889, 931, 1059
LguI	GCTCTTC	2 cut(s)	662, 1088
LmnI	GCTCC	5 cut(s)	563, 677, 765, 857, 865
Lsp1109I	GCAGC	1 cut(s)	946
LweI	GCATC	2 cut(s)	189, 211
MaeI	CTAG	3 cut(s)	626, 752, 878
MaeII	ACGT	1 cut(s)	660
MaeIII	GTNAC	5 cut(s)	36, 557, 832, 897, 965
MalI	GATC	8 cut(s)	84, 102, 171, 336, 697, 891, 933, 1061
MbiI	CCGCTC	1 cut(s)	1098
MboI	GATC	8 cut(s)	82, 100, 169, 334, 695, 889, 931, 1059
MfeI	CAATTG	2 cut(s)	152, 907
MhlI	GDGCHC	2 cut(s)	472, 674
MluCI	AATT	7 cut(s)	53, 152, 214, 446, 527, 783, 907
MlyI	GAGTC	1 cut(s)	1201
MnlI	CCTC	9 cut(s)	72, 464, 628, 812, 987, 1039, 1099, 1140, 1143
Mph1103I	ATGCAT	1 cut(s)	204
MseI	TTAA	5 cut(s)	303, 579, 591, 840, 1008
MspA1I	CMGCKG	1 cut(s)	943
MspI	CCGG	1 cut(s)	650
MspR9I	CCNGG	4 cut(s)	644, 825, 855, 903
MunI	CAATTG	2 cut(s)	152, 907
Mva1269I	GAATGC	1 cut(s)	768
MvaI	CCWGG	4 cut(s)	644, 825, 855, 903
MvnI	CGCG	1 cut(s)	943
MwoI	GCNNNNNNNGC	1 cut(s)	874
NdeII	GATC	8 cut(s)	82, 100, 169, 334, 695, 889, 931, 1059
NlaIII	CATG	6 cut(s)	295, 748, 887, 953, 1106, 1206
NlaIV	GGNNCC	6 cut(s)	309, 571, 639, 648, 778, 867
NmuCI	GTSAC	1 cut(s)	965
NsiI	ATGCAT	1 cut(s)	204
PagI	TCATGA	1 cut(s)	291
PaqCI	CACCTGC	1 cut(s)	953
PceI	AGGCCT	1 cut(s)	790
PciSI	GCTCTTC	2 cut(s)	662, 1088
PctI	GAATGC	1 cut(s)	768
PfeI	GAWTC	2 cut(s)	794, 953
Pfl23II	CGTACG	1 cut(s)	714
PfoI	TCCNGGA	1 cut(s)	853
PkrI	GCNGC	2 cut(s)	942, 961
PleI	GAGTC	1 cut(s)	1201
PpsI	GAGTC	1 cut(s)	1201
PpuMI	RGGWCCY	1 cut(s)	637
Psp124BI	GAGCTC	2 cut(s)	472, 674
Psp5II	RGGWCCY	1 cut(s)	637
Psp6I	CCWGG	4 cut(s)	642, 823, 853, 901
PspGI	CCWGG	4 cut(s)	642, 823, 853, 901
PspLI	CGTACG	1 cut(s)	714
PspN4I	GGNNCC	6 cut(s)	309, 571, 639, 648, 778, 867
PspPI	GGNCC	5 cut(s)	308, 637, 755, 821, 1187
PspPPI	RGGWCCY	1 cut(s)	637
PstI	CTGCAG	1 cut(s)	964
RsaI	GTAC	2 cut(s)	716, 778
RsaNI	GTAC	2 cut(s)	715, 777
SacI	GAGCTC	2 cut(s)	472, 674
SacII	CCGCGG	1 cut(s)	944
SapI	GCTCTTC	2 cut(s)	662, 1088
SaqAI	TTAA	5 cut(s)	303, 579, 591, 840, 1008
SatI	GCNGC	2 cut(s)	941, 960
Sau3AI	GATC	8 cut(s)	82, 100, 169, 334, 695, 889, 931, 1059
Sau96I	GGNCC	5 cut(s)	308, 637, 755, 821, 1187
SchI	GAGTC	1 cut(s)	1201
ScrFI	CCNGG	4 cut(s)	644, 825, 855, 903
SduI	GDGCHC	2 cut(s)	472, 674
SfaNI	GCATC	2 cut(s)	189, 211
SfcI	CTRYAG	1 cut(s)	960
Sfr303I	CCGCGG	1 cut(s)	944
SgrBI	CCGCGG	1 cut(s)	944
SinI	GGWCC	3 cut(s)	308, 637, 1187
SmlI	CTYRAG	4 cut(s)	63, 107, 1081, 1117
SmoI	CTYRAG	4 cut(s)	63, 107, 1081, 1117
Sse9I	AATT	7 cut(s)	53, 152, 214, 446, 527, 783, 907
SseBI	AGGCCT	1 cut(s)	790
SsiI	CCGC	3 cut(s)	941, 943, 1098
SspI	AATATT	1 cut(s)	298
SspMI	CTAG	3 cut(s)	626, 752, 878
SstI	GAGCTC	2 cut(s)	472, 674
StuI	AGGCCT	1 cut(s)	790
StyD4I	CCNGG	4 cut(s)	642, 823, 853, 901
StyI	CCWWGG	1 cut(s)	751
TaaI	ACNGT	1 cut(s)	971
TaiI	ACGT	1 cut(s)	663
TaqI	TCGA	3 cut(s)	466, 633, 797
TasI	AATT	7 cut(s)	53, 152, 214, 446, 527, 783, 907
TauI	GCSGC	1 cut(s)	943
TfiI	GAWTC	2 cut(s)	794, 953
Tru1I	TTAA	5 cut(s)	303, 579, 591, 840, 1008
Tru9I	TTAA	5 cut(s)	303, 579, 591, 840, 1008
TscAI	CASTG	2 cut(s)	276, 976
TseFI	GTSAC	1 cut(s)	965
TseI	GCWGC	1 cut(s)	959
Tsp45I	GTSAC	1 cut(s)	965
TspDTI	ATGAA	9 cut(s)	17, 93, 110, 308, 414, 443, 939, 993, 1083
TspGWI	ACGGA	1 cut(s)	576
TspRI	CASTG	2 cut(s)	276, 976
VpaK11BI	GGWCC	3 cut(s)	308, 637, 1187
XagI	CCTNNNNNAGG	1 cut(s)	858
XmaJI	CCTAGG	1 cut(s)	751
XspI	CTAG	3 cut(s)	626, 752, 878
ZraI	GACGTC	1 cut(s)	661
Zsp2I	ATGCAT	1 cut(s)	204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.