Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0006376

Physical Location & Seq

Genomic Coordinates Reverse (-)

18578139 .. 18582597

Gene Structure 4459 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g17420.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGAGGAGCCGCCGACCCAAAGCTTTCTCTACGAAACCCTACCCGCCCTCTCTCTTCCCACCCCCAACCAATCTCCGCCGCCGCCCGAGGACCTCGAACCCTACTCCGTTTTCCGCAACGAAATTACTCTCTCCACTCCCCAATGCGCTCCTGTCGACACTGCCGCCCCCGATTTCTTCTCCCTCGACGTTGCCGCCGATGAACCCGACCCAATTCGTGCCTCCTCGTCTTCTGTCCGCCTAGCCGAGCCATGGCCGCCGCTTCACCAATCCGAGCCCACGACGCCGGCTCCTCAAGAGCCGAAGCTCGAGAGCGGGTGGTTTCGCGGCCATTGCAAATTCAGGAGCCCTATGCTTCAGCTTCATAAAGAGATTGTGGATTTCTGTGATTTTCTGTCTCCAACTCCAGAAGAACAAGAGGCACGCAGTGCAGCAGTAAAACGGGTCTCGGACCTTATCAAATATATATTTCCTCGGTCCAAGGTTGAAGTTTTTGGGTCCTTCAAGACGGGGTTATATCTTCCCGCTAGTGATATTGATGCTGTCATTATGGGGTCAGGCGTCAAAACACCACAGGAAGGATTGAAGGCCCTTTCTAGGGCATTGTCACAGATGGGATTGGCAAAAAGGATACAGGTGTGCCTCAAGTTTTATTTGAAATATTATTGCGGACAAACTTCAGCTTCTGTATTTGTTCTATGTGGATTCCGCAGTTTTGACATAGAAGGTGGACCAAAAGCTGCTGAATTCATTCAGGATGCAGTATCTAAGTGGCCTCCTTTGCGGCCTTTATGTTTGATTTTGAAAGTATTTTTACAACAGAGAGAGCTAAATGAGGTATACTCTGGTGGATTAGGTTCCTACGCTCTCCTTACAATGATCATGGCAATGTTGCATAGCCTCAGGGAATGTCGACCTCCGGAACAAAACTTGGGAGTTCTTTTGGTAAACTTCTTTGATTTTTATGGACGCAAATTGAACACTTCAGATGTTGGTGTATCGTGCAATGGGGCAGGCACCTTTTTCAAAAAGAGTGTAAAAGGGTTCTTATCCAATGGACGACCTTTTCTTCTTGCCATTGAGGACCCCCAGGCACCGGAGAATGACGTCGGGAAGAACTCCTTCAACTATTTTCAGATTAGATCAGCTTTTTCAATGGCTTACACTACATTGACAAACCCTAAGGTCATTATGGGCCTAGGGCCAAACAGGAGCATTCTCGGTACTATAATTAGGCCTGATTCGGCGTTGGTGGAACGCAAAGGGGGGCCTGGAATGGTAACTTTCAATAGCTTGCTTCCTGGAGCAGGGGAGCCAGTTCAGCTAGAACATGATCCACAGGAGTTACTGGGCAATTGGCAATTTGATGATGGAGATGATCCCCTGCCACGGGGACATGATTCTGCTGCAGGTGACAGTGGGCAATCATCAGGAAAAAAGAGAAAAGCTTCTTTTAAAGAAAATTCCGGTAAGAAGGGCAAGGAATATGGGGAGGTGGGGAAGAAGATCAGATATGAAGAAAATGGCTCAAGGAGAGAGAGGAGCAGGCATGAGGAAAATGGATCAAGGAAAGACAAGAGAAAAAAGAAGATGAGGAGACGGAGACATTCCCAAGATGGTGCCAATAGTTTTGGTCCTTATGGTGGTGCATGGACTCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000956 GO:0003674 GO:0003824 GO:0004652 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008334 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010586 GO:0010587 GO:0010605 GO:0010629 GO:0010639 GO:0016070 GO:0016071 GO:0016074 GO:0016740 GO:0016772 GO:0016779 GO:0019219 GO:0019222 GO:0019439 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0033043 GO:0033044 GO:0033500 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042592 GO:0043144 GO:0043170 GO:0043628 GO:0043629 GO:0043630 GO:0043631 GO:0043632 GO:0043633 GO:0043634 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045934 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0065008 GO:0070566 GO:0071044 GO:0071050 GO:0071704 GO:0080090 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1904356 GO:1904357 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

NTP_transf_2 PAP_assoc

Protein Analysis

554

Amino Acids

61.29

Weight (kDa)

8.76

Isoelectric Point (pI)

54.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53770
fragaria_vesca	FvH4_3g20190 FvH4_3g20190 FvH4_3g20190 FvH4_3g20190 FvH4_3g20190
malus_domestica	MD01G1239400.v1.1 MD03G1226500.v1.1 MD05G1272800.v1.1 MD08G1067800.v1.1 MD10G1025000.v1.1 MD11G1244500.v1.1 MD11G1244600.v1.1
prunus_persica	Prupe.4G182900_v2.0.a1
pyrus_communis	pycom03g17420
rosa_chinensis	RchiOBHm_Chr5g0034001
rosa_laevigata	RLG00000033518
rosa_multiflora	Rmu_sc0012341.1_g000005 Rmu_sc0014753.1_g000002
rosa_roxburghii	Rroxscaffold_1G00046230
rosa_rugosa	Rorug05G0144100
rosa_samantha	Rh5AG235000 Rh5BG235800 Rh5CG265600 Rh5DG242200
rosa_wichuraiana	Rw5G021220 Rw5G021460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1400
AatII	GACGTC	1 cut(s)	1110
Acc36I	ACCTGC	1 cut(s)	1400
AccB1I	GGYRCC	3 cut(s)	1016, 1093, 1619
AccBSI	CCGCTC	1 cut(s)	315
AccI	GTMKAC	3 cut(s)	156, 840, 913
AccII	CGCG	1 cut(s)	327
AccIII	TCCGGA	1 cut(s)	919
AclWI	GGATC	3 cut(s)	1328, 1373, 1570
AcoI	YGGCCR	2 cut(s)	254, 328
AcsI	RAATTY	3 cut(s)	338, 746, 1462
AcuI	CTGAAG	3 cut(s)	341, 663, 969
AcyI	GRCGYC	3 cut(s)	284, 561, 1107
AdeI	CACNNNGTG	1 cut(s)	428
AfaI	GTAC	1 cut(s)	1225
AfiI	CCNNNNNNNGG	9 cut(s)	252, 578, 597, 598, 1096, 1307, 1389, 1390, 1643
AjnI	CCWGG	3 cut(s)	1089, 1270, 1300
Alw26I	GTCTC	4 cut(s)	402, 451, 1591, 1597
AlwI	GGATC	3 cut(s)	1328, 1373, 1570
AlwNI	CAGNNNCTG	1 cut(s)	686
Ama87I	CYCGRG	2 cut(s)	86, 308
Aor13HI	TCCGGA	1 cut(s)	919
AoxI	GGCC	9 cut(s)	254, 328, 588, 773, 785, 1195, 1202, 1235, 1268
ApeKI	GCWGC	3 cut(s)	431, 740, 1406
ApoI	RAATTY	3 cut(s)	338, 746, 1462
Asp700I	GAANNNNTTC	3 cut(s)	750, 1121, 1447
AspA2I	CCTAGG	1 cut(s)	1198
AspLEI	GCGC	1 cut(s)	149
AsuHPI	GGTGA	2 cut(s)	257, 1424
AvaI	CYCGRG	2 cut(s)	86, 308
AvaII	GGWCC	7 cut(s)	91, 451, 477, 498, 731, 1084, 1634
AvrII	CCTAGG	1 cut(s)	1198
AxyI	CCTNAGG	2 cut(s)	902, 1182
BaeI	ACNNNNGTAYC	2 cut(s)	623, 656
BanI	GGYRCC	3 cut(s)	1016, 1093, 1619
BanII	GRGCYC	2 cut(s)	279, 350
BbsI	GAAGAC	1 cut(s)	222
BbvI	GCAGC	3 cut(s)	443, 727, 1393
BccI	CCATC	3 cut(s)	607, 1364, 1610
BciT130I	CCWGG	3 cut(s)	1091, 1272, 1302
BciVI	GTATCC	1 cut(s)	624
BclI	TGATCA	1 cut(s)	879
BcoDI	GTCTC	4 cut(s)	402, 451, 1591, 1597
BfaI	CTAG	5 cut(s)	242, 528, 597, 1199, 1325
BfmI	CTRYAG	1 cut(s)	1407
BfuAI	ACCTGC	1 cut(s)	1400
BfuI	GTATCC	1 cut(s)	624
BlnI	CCTAGG	1 cut(s)	1198
Bme1390I	CCNGG	3 cut(s)	1091, 1272, 1302
Bme18I	GGWCC	7 cut(s)	91, 451, 477, 498, 731, 1084, 1634
BmeT110I	CYCGRG	2 cut(s)	86, 308
BmrFI	CCNGG	3 cut(s)	1091, 1272, 1302
BmrI	ACTGGG	1 cut(s)	1358
BmsI	GCATC	2 cut(s)	529, 748
BmuI	ACTGGG	1 cut(s)	1358
BpiI	GAAGAC	1 cut(s)	222
BplI	GAGNNNNNCTC	2 cut(s)	827, 859
BpmI	CTGGAG	2 cut(s)	390, 1323
BpuEI	CTTGAG	3 cut(s)	279, 629, 1513
BsaHI	GRCGYC	3 cut(s)	284, 561, 1107
BsaI	GGTCTC	1 cut(s)	451
BsaJI	CCNNGG	7 cut(s)	87, 251, 473, 480, 1089, 1198, 1388
BsaWI	WCCGGW	3 cut(s)	919, 1096, 1466
BsaXI	ACNNNNNCTCC	2 cut(s)	274, 304
Bsc4I	CCNNNNNNNGG	9 cut(s)	252, 578, 597, 598, 1096, 1307, 1389, 1390, 1643
Bse118I	RCCGGY	1 cut(s)	286
Bse1I	ACTGG	2 cut(s)	1316, 1353
Bse21I	CCTNAGG	2 cut(s)	902, 1182
Bse3DI	GCAATG	3 cut(s)	331, 894, 1012
BseAI	TCCGGA	1 cut(s)	919
BseBI	CCWGG	3 cut(s)	1091, 1272, 1302
BseDI	CCNNGG	7 cut(s)	87, 251, 473, 480, 1089, 1198, 1388
BseGI	GGATG	1 cut(s)	763
BseLI	CCNNNNNNNGG	9 cut(s)	252, 578, 597, 598, 1096, 1307, 1389, 1390, 1643
BseMI	GCAATG	3 cut(s)	331, 894, 1012
BseMII	CTCAG	1 cut(s)	916
BseNI	ACTGG	2 cut(s)	1316, 1353
BseRI	GAGGAG	5 cut(s)	20, 214, 282, 1555, 1609
BseXI	GCAGC	3 cut(s)	443, 727, 1393
BsgI	GTGCAG	1 cut(s)	450
Bsh1236I	CGCG	1 cut(s)	327
BshFI	GGCC	9 cut(s)	256, 330, 590, 775, 787, 1197, 1204, 1237, 1270
BshNI	GGYRCC	3 cut(s)	1016, 1093, 1619
BsiHKCI	CYCGRG	2 cut(s)	86, 308
BsiSI	CCGG	4 cut(s)	287, 920, 1097, 1467
BslFI	GGGAC	1 cut(s)	1407
BslI	CCNNNNNNNGG	9 cut(s)	252, 578, 597, 598, 1096, 1307, 1389, 1390, 1643
BsmAI	GTCTC	4 cut(s)	402, 451, 1591, 1597
BsmBI	CGTCTC	1 cut(s)	1591
BsmFI	GGGAC	1 cut(s)	1407
BsmI	GAATGC	1 cut(s)	1215
BsnI	GGCC	9 cut(s)	256, 330, 590, 775, 787, 1197, 1204, 1237, 1270
Bso31I	GGTCTC	1 cut(s)	451
BsoBI	CYCGRG	2 cut(s)	86, 308
Bsp1286I	GDGCHC	2 cut(s)	279, 350
Bsp13I	TCCGGA	1 cut(s)	919
Bsp143I	GATC	6 cut(s)	879, 1142, 1333, 1378, 1506, 1562
Bsp19I	CCATGG	1 cut(s)	251
BspANI	GGCC	9 cut(s)	256, 330, 590, 775, 787, 1197, 1204, 1237, 1270
BspCNI	CTCAG	1 cut(s)	915
BspEI	TCCGGA	1 cut(s)	919
BspFNI	CGCG	1 cut(s)	327
BspMAI	CTGCAG	1 cut(s)	1411
BspMI	ACCTGC	1 cut(s)	1400
BspPI	GGATC	3 cut(s)	1328, 1373, 1570
BspT107I	GGYRCC	3 cut(s)	1016, 1093, 1619
BspTNI	GGTCTC	1 cut(s)	451
BsrBI	CCGCTC	1 cut(s)	315
BsrDI	GCAATG	3 cut(s)	331, 894, 1012
BsrFI	RCCGGY	1 cut(s)	286
BsrI	ACTGG	2 cut(s)	1316, 1353
BssAI	RCCGGY	1 cut(s)	286
BssECI	CCNNGG	7 cut(s)	87, 251, 473, 480, 1089, 1198, 1388
BssMI	GATC	6 cut(s)	879, 1142, 1333, 1378, 1506, 1562
BssNAI	GTATAC	1 cut(s)	841
BssNI	GRCGYC	3 cut(s)	284, 561, 1107
BssT1I	CCWWGG	3 cut(s)	251, 480, 1198
Bst1107I	GTATAC	1 cut(s)	841
Bst2UI	CCWGG	3 cut(s)	1091, 1272, 1302
Bst4CI	ACNGT	1 cut(s)	1418
Bst6I	CTCTTC	1 cut(s)	60
BstACI	GRCGYC	3 cut(s)	284, 561, 1107
BstAPI	GCANNNNNTGC	1 cut(s)	428
BstC8I	GCNNGC	5 cut(s)	288, 424, 1015, 1295, 1547
BstDEI	CTNAG	3 cut(s)	768, 902, 1182
BstDSI	CCRYGG	2 cut(s)	251, 1388
BstENI	CCTNNNNNAGG	1 cut(s)	1305
BstF5I	GGATG	1 cut(s)	763
BstFNI	CGCG	1 cut(s)	327
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	6 cut(s)	882, 1145, 1336, 1381, 1509, 1565
BstMAI	GTCTC	4 cut(s)	402, 451, 1591, 1597
BstMBI	GATC	6 cut(s)	879, 1142, 1333, 1378, 1506, 1562
BstMWI	GCNNNNNNNGC	6 cut(s)	256, 283, 333, 428, 781, 1321
BstNI	CCWGG	3 cut(s)	1091, 1272, 1302
BstSCI	CCNGG	3 cut(s)	1089, 1270, 1300
BstSFI	CTRYAG	1 cut(s)	1407
BstUI	CGCG	1 cut(s)	327
BstV1I	GCAGC	3 cut(s)	443, 727, 1393
BstV2I	GAAGAC	1 cut(s)	222
BstZ17I	GTATAC	1 cut(s)	841
Bsu36I	CCTNAGG	2 cut(s)	902, 1182
BsuI	GTATCC	1 cut(s)	624
BsuRI	GGCC	9 cut(s)	256, 330, 590, 775, 787, 1197, 1204, 1237, 1270
BtgI	CCRYGG	2 cut(s)	251, 1388
BtsCI	GGATG	1 cut(s)	763
BtsI	GCAGTG	2 cut(s)	159, 433
BtsIMutI	CAGTG	3 cut(s)	159, 433, 1423
BveI	ACCTGC	1 cut(s)	1400
Cac8I	GCNNGC	5 cut(s)	288, 424, 1015, 1295, 1547
CaiI	CAGNNNCTG	1 cut(s)	686
CfoI	GCGC	1 cut(s)	149
Cfr10I	RCCGGY	1 cut(s)	286
CseI	GACGC	3 cut(s)	292, 550, 978
Csp6I	GTAC	1 cut(s)	1224
CviAII	CATG	6 cut(s)	252, 883, 1331, 1397, 1550, 1650
CviQI	GTAC	1 cut(s)	1224
DdeI	CTNAG	3 cut(s)	768, 902, 1182
DpnI	GATC	6 cut(s)	881, 1144, 1335, 1380, 1508, 1564
DpnII	GATC	6 cut(s)	879, 1142, 1333, 1378, 1506, 1562
DraI	TTTAAA	1 cut(s)	1456
DraIII	CACNNNGTG	1 cut(s)	428
EaeI	YGGCCR	2 cut(s)	254, 328
Eam1104I	CTCTTC	1 cut(s)	60
EarI	CTCTTC	1 cut(s)	60
EciI	GGCGGA	2 cut(s)	66, 227
Eco130I	CCWWGG	3 cut(s)	251, 480, 1198
Eco147I	AGGCCT	1 cut(s)	1237
Eco24I	GRGCYC	2 cut(s)	279, 350
Eco31I	GGTCTC	1 cut(s)	451
Eco47I	GGWCC	7 cut(s)	91, 451, 477, 498, 731, 1084, 1634
Eco57I	CTGAAG	3 cut(s)	341, 663, 969
Eco81I	CCTNAGG	2 cut(s)	902, 1182
Eco88I	CYCGRG	2 cut(s)	86, 308
EcoNI	CCTNNNNNAGG	1 cut(s)	1305
EcoO109I	RGGNCCY	5 cut(s)	91, 498, 589, 1084, 1268
EcoRI	GAATTC	1 cut(s)	746
EcoRII	CCWGG	3 cut(s)	1089, 1270, 1300
EcoT14I	CCWWGG	3 cut(s)	251, 480, 1198
EcoT38I	GRGCYC	2 cut(s)	279, 350
ErhI	CCWWGG	3 cut(s)	251, 480, 1198
Esp3I	CGTCTC	1 cut(s)	1591
FaeI	CATG	6 cut(s)	255, 886, 1334, 1400, 1553, 1653
FalI	AAGNNNNNCTT	2 cut(s)	1106, 1138
FaqI	GGGAC	1 cut(s)	1407
FatI	CATG	6 cut(s)	251, 882, 1330, 1396, 1549, 1649
FauI	CCCGC	3 cut(s)	52, 308, 532
FbaI	TGATCA	1 cut(s)	879
FblI	GTMKAC	3 cut(s)	156, 840, 913
FokI	GGATG	1 cut(s)	770
FriOI	GRGCYC	2 cut(s)	279, 350
FspBI	CTAG	5 cut(s)	242, 528, 597, 1199, 1325
GlaI	GCGC	1 cut(s)	148
GsuI	CTGGAG	2 cut(s)	390, 1323
HaeIII	GGCC	9 cut(s)	256, 330, 590, 775, 787, 1197, 1204, 1237, 1270
HapII	CCGG	4 cut(s)	287, 920, 1097, 1467
HgaI	GACGC	3 cut(s)	292, 550, 978
HhaI	GCGC	1 cut(s)	149
Hin1I	GRCGYC	3 cut(s)	284, 561, 1107
Hin1II	CATG	6 cut(s)	255, 886, 1334, 1400, 1553, 1653
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HincII	GTYRAC	2 cut(s)	157, 914
HindII	GTYRAC	2 cut(s)	157, 914
HindIII	AAGCTT	2 cut(s)	22, 1446
HinfI	GANTC	4 cut(s)	705, 1241, 1400, 1654
HpaII	CCGG	4 cut(s)	287, 920, 1097, 1467
HphI	GGTGA	2 cut(s)	257, 1424
Hpy166II	GTNNAC	5 cut(s)	157, 731, 841, 914, 949
Hpy188I	TCNGA	5 cut(s)	274, 451, 988, 1137, 1511
Hpy188III	TCNNGA	9 cut(s)	296, 310, 343, 407, 505, 755, 920, 1111, 1431
Hpy8I	GTNNAC	5 cut(s)	157, 731, 841, 914, 949
Hpy99I	CGWCG	3 cut(s)	191, 286, 1112
HpyAV	CCTTC	6 cut(s)	511, 572, 580, 719, 1132, 1468
HpyCH4III	ACNGT	1 cut(s)	1418
HpyCH4IV	ACGT	2 cut(s)	189, 1107
HpyCH4V	TGCA	7 cut(s)	336, 431, 761, 895, 1005, 1409, 1649
HpyF10VI	GCNNNNNNNGC	6 cut(s)	256, 283, 333, 428, 781, 1321
HpyF3I	CTNAG	3 cut(s)	768, 902, 1182
HpySE526I	ACGT	2 cut(s)	189, 1107
Hsp92I	GRCGYC	3 cut(s)	284, 561, 1107
Hsp92II	CATG	6 cut(s)	255, 886, 1334, 1400, 1553, 1653
HspAI	GCGC	1 cut(s)	147
Kpn2I	TCCGGA	1 cut(s)	919
KroI	GCCGGC	1 cut(s)	286
KroNI	GCCGGC	1 cut(s)	288
Ksp22I	TGATCA	1 cut(s)	879
Kzo9I	GATC	6 cut(s)	879, 1142, 1333, 1378, 1506, 1562
LmnI	GCTCC	8 cut(s)	7, 154, 295, 345, 1212, 1304, 1312, 1542
Lsp1109I	GCAGC	3 cut(s)	443, 727, 1393
LweI	GCATC	2 cut(s)	529, 748
MaeI	CTAG	5 cut(s)	242, 528, 597, 1199, 1325
MaeII	ACGT	2 cut(s)	189, 1107
MaeIII	GTNAC	4 cut(s)	606, 1279, 1344, 1412
MalI	GATC	6 cut(s)	881, 1144, 1335, 1380, 1508, 1564
MbiI	CCGCTC	1 cut(s)	315
MboI	GATC	6 cut(s)	879, 1142, 1333, 1378, 1506, 1562
MfeI	CAATTG	1 cut(s)	1354
MhlI	GDGCHC	2 cut(s)	279, 350
MluCI	AATT	9 cut(s)	123, 213, 338, 746, 974, 1230, 1354, 1361, 1462
MlyI	GAGTC	1 cut(s)	1648
MmeI	TCCRAC	1 cut(s)	425
MroI	TCCGGA	1 cut(s)	919
MroNI	GCCGGC	1 cut(s)	286
MroXI	GAANNNNTTC	3 cut(s)	750, 1121, 1447
MseI	TTAA	1 cut(s)	1455
MslI	CAYNNNNRTG	1 cut(s)	887
MspI	CCGG	4 cut(s)	287, 920, 1097, 1467
MspR9I	CCNGG	3 cut(s)	1091, 1272, 1302
MunI	CAATTG	1 cut(s)	1354
Mva1269I	GAATGC	1 cut(s)	1215
MvaI	CCWGG	3 cut(s)	1091, 1272, 1302
MvnI	CGCG	1 cut(s)	327
MwoI	GCNNNNNNNGC	6 cut(s)	256, 283, 333, 428, 781, 1321
NaeI	GCCGGC	1 cut(s)	288
NcoI	CCATGG	1 cut(s)	251
NdeII	GATC	6 cut(s)	879, 1142, 1333, 1378, 1506, 1562
NgoMIV	GCCGGC	1 cut(s)	286
NlaIII	CATG	6 cut(s)	255, 886, 1334, 1400, 1553, 1653
NmeAIII	GCCGAG	1 cut(s)	271
NmuCI	GTSAC	2 cut(s)	606, 1412
PaeR7I	CTCGAG	1 cut(s)	308
PaqCI	CACCTGC	1 cut(s)	1400
PceI	AGGCCT	1 cut(s)	1237
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PctI	GAATGC	1 cut(s)	1215
PdiI	GCCGGC	1 cut(s)	288
PdmI	GAANNNNTTC	3 cut(s)	750, 1121, 1447
PfeI	GAWTC	3 cut(s)	705, 1241, 1400
PfoI	TCCNGGA	1 cut(s)	1300
PleI	GAGTC	1 cut(s)	1648
PpsI	GAGTC	1 cut(s)	1648
PpuMI	RGGWCCY	3 cut(s)	91, 498, 1084
Psp5II	RGGWCCY	3 cut(s)	91, 498, 1084
Psp6I	CCWGG	3 cut(s)	1089, 1270, 1300
PspGI	CCWGG	3 cut(s)	1089, 1270, 1300
PspPPI	RGGWCCY	3 cut(s)	91, 498, 1084
PstI	CTGCAG	1 cut(s)	1411
PstNI	CAGNNNCTG	1 cut(s)	686
RsaI	GTAC	1 cut(s)	1225
RsaNI	GTAC	1 cut(s)	1224
RseI	CAYNNNNRTG	1 cut(s)	887
SalI	GTCGAC	2 cut(s)	155, 912
SaqAI	TTAA	1 cut(s)	1455
Sau3AI	GATC	6 cut(s)	879, 1142, 1333, 1378, 1506, 1562
SchI	GAGTC	1 cut(s)	1648
ScrFI	CCNGG	3 cut(s)	1091, 1272, 1302
SduI	GDGCHC	2 cut(s)	279, 350
SfaNI	GCATC	2 cut(s)	529, 748
SfcI	CTRYAG	1 cut(s)	1407
Sfr274I	CTCGAG	1 cut(s)	308
SinI	GGWCC	7 cut(s)	91, 451, 477, 498, 731, 1084, 1634
SlaI	CTCGAG	1 cut(s)	308
SmiMI	CAYNNNNRTG	1 cut(s)	887
SmlI	CTYRAG	4 cut(s)	294, 308, 644, 1528
SmoI	CTYRAG	4 cut(s)	294, 308, 644, 1528
Sse9I	AATT	9 cut(s)	123, 213, 338, 746, 974, 1230, 1354, 1361, 1462
SseBI	AGGCCT	1 cut(s)	1237
SspI	AATATT	1 cut(s)	662
SspMI	CTAG	5 cut(s)	242, 528, 597, 1199, 1325
StuI	AGGCCT	1 cut(s)	1237
StyD4I	CCNGG	3 cut(s)	1089, 1270, 1300
StyI	CCWWGG	3 cut(s)	251, 480, 1198
TaaI	ACNGT	1 cut(s)	1418
TaiI	ACGT	2 cut(s)	192, 1110
TaqI	TCGA	5 cut(s)	96, 156, 186, 309, 913
TaqII	GACCGA	1 cut(s)	465
TasI	AATT	9 cut(s)	123, 213, 338, 746, 974, 1230, 1354, 1361, 1462
TauI	GCSGC	9 cut(s)	13, 82, 85, 167, 197, 259, 262, 330, 787
TfiI	GAWTC	3 cut(s)	705, 1241, 1400
Tru1I	TTAA	1 cut(s)	1455
Tru9I	TTAA	1 cut(s)	1455
TscAI	CASTG	3 cut(s)	166, 433, 1423
TseFI	GTSAC	2 cut(s)	606, 1412
TseI	GCWGC	3 cut(s)	431, 740, 1406
Tsp45I	GTSAC	2 cut(s)	606, 1412
TspDTI	ATGAA	4 cut(s)	216, 353, 739, 1530
TspGWI	ACGGA	2 cut(s)	97, 1615
TspRI	CASTG	3 cut(s)	166, 433, 1423
VpaK11BI	GGWCC	7 cut(s)	91, 451, 477, 498, 731, 1084, 1634
XagI	CCTNNNNNAGG	1 cut(s)	1305
XapI	RAATTY	3 cut(s)	338, 746, 1462
XhoI	CTCGAG	1 cut(s)	308
XmaJI	CCTAGG	1 cut(s)	1198
XmiI	GTMKAC	3 cut(s)	156, 840, 913
XmnI	GAANNNNTTC	3 cut(s)	750, 1121, 1447
XspI	CTAG	5 cut(s)	242, 528, 597, 1199, 1325
ZraI	GACGTC	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.