Non-canonical poly(A) RNA polymerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53770 |
| fragaria_vesca | FvH4_3g20190 FvH4_3g20190 FvH4_3g20190 FvH4_3g20190 FvH4_3g20190 |
| malus_domestica | MD01G1239400.v1.1 MD03G1226500.v1.1 MD05G1272800.v1.1 MD08G1067800.v1.1 MD10G1025000.v1.1 MD11G1244500.v1.1 MD11G1244600.v1.1 |
| prunus_persica | Prupe.4G182900_v2.0.a1 |
| pyrus_communis | pycom03g17420 |
| rosa_chinensis | RchiOBHm_Chr5g0034001 |
| rosa_laevigata | RLG00000033518 |
| rosa_multiflora | Rmu_sc0012341.1_g000005 Rmu_sc0014753.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00046230 |
| rosa_rugosa | Rorug05G0144100 |
| rosa_samantha | Rh5AG235000 Rh5BG235800 Rh5CG265600 Rh5DG242200 |
| rosa_wichuraiana | Rw5G021220 Rw5G021460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1220 |
| AccB1I | GGYRCC | 3 cut(s) | 191, 1090, 1220 |
| AccBSI | CCGCTC | 1 cut(s) | 315 |
| AccII | CGCG | 2 cut(s) | 755, 1387 |
| AclWI | GGATC | 4 cut(s) | 1076, 1089, 1232, 1370 |
| AcsI | RAATTY | 1 cut(s) | 338 |
| AcuI | CTGAAG | 5 cut(s) | 341, 414, 900, 966, 1301 |
| AcyI | GRCGYC | 1 cut(s) | 254 |
| AfaI | GTAC | 2 cut(s) | 232, 1222 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 118, 249, 578, 597, 598, 754, 1304, 1386, 1387 |
| AflIII | ACRYGT | 1 cut(s) | 442 |
| AgsI | TTSAA | 6 cut(s) | 293, 343, 488, 505, 976, 1152 |
| AjnI | CCWGG | 4 cut(s) | 90, 747, 1086, 1297 |
| AluBI | AGCT | 8 cut(s) | 307, 361, 734, 911, 1280, 1290, 1321, 1554 |
| AluI | AGCT | 8 cut(s) | 307, 361, 734, 911, 1280, 1290, 1321, 1554 |
| Alw26I | GTCTC | 4 cut(s) | 231, 451, 1585, 1591 |
| AlwI | GGATC | 4 cut(s) | 1076, 1089, 1232, 1370 |
| Ama87I | CYCGRG | 2 cut(s) | 308, 1268 |
| AoxI | GGCC | 7 cut(s) | 216, 328, 470, 588, 767, 1198, 1265 |
| ApaI | GGGCCC | 1 cut(s) | 1269 |
| ApeKI | GCWGC | 3 cut(s) | 239, 574, 734 |
| ApoI | RAATTY | 1 cut(s) | 338 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 692, 724 |
| Asp718I | GGTACC | 1 cut(s) | 1220 |
| AspA2I | CCTAGG | 1 cut(s) | 1195 |
| AspLEI | GCGC | 2 cut(s) | 49, 146 |
| AspS9I | GGNCC | 9 cut(s) | 216, 328, 498, 589, 725, 1014, 1199, 1265, 1266 |
| AsuC2I | CCSGG | 2 cut(s) | 1269, 1270 |
| AsuHPI | GGTGA | 4 cut(s) | 213, 254, 649, 1499 |
| AvaI | CYCGRG | 2 cut(s) | 308, 1268 |
| AvaII | GGWCC | 3 cut(s) | 498, 725, 1014 |
| AvrII | CCTAGG | 1 cut(s) | 1195 |
| AxyI | CCTNAGG | 1 cut(s) | 1179 |
| BaeGI | GKGCMC | 1 cut(s) | 1269 |
| BamHI | GGATCC | 1 cut(s) | 1081 |
| BanI | GGYRCC | 3 cut(s) | 191, 1090, 1220 |
| BanII | GRGCYC | 2 cut(s) | 350, 1269 |
| BbvI | GCAGC | 3 cut(s) | 251, 586, 721 |
| BccI | CCATC | 3 cut(s) | 607, 1082, 1325 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 173, 207 |
| BciT130I | CCWGG | 4 cut(s) | 92, 749, 1088, 1299 |
| BcnI | CCSGG | 2 cut(s) | 1269, 1270 |
| BcoDI | GTCTC | 4 cut(s) | 231, 451, 1585, 1591 |
| BfaI | CTAG | 6 cut(s) | 528, 597, 1196, 1274, 1322, 1536 |
| BfoI | RGCGCY | 1 cut(s) | 50 |
| BisI | GCNGC | 7 cut(s) | 80, 162, 240, 257, 575, 735, 1385 |
| BlnI | CCTAGG | 1 cut(s) | 1195 |
| BlsI | GCNGC | 7 cut(s) | 81, 163, 241, 258, 576, 736, 1386 |
| Bme1390I | CCNGG | 6 cut(s) | 92, 749, 1088, 1269, 1270, 1299 |
| Bme18I | GGWCC | 3 cut(s) | 498, 725, 1014 |
| BmeT110I | CYCGRG | 2 cut(s) | 308, 1268 |
| BmgT120I | GGNCC | 9 cut(s) | 216, 328, 498, 589, 725, 1014, 1199, 1265, 1266 |
| BmrFI | CCNGG | 6 cut(s) | 92, 749, 1088, 1269, 1270, 1299 |
| BmsI | GCATC | 1 cut(s) | 861 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 380, 412, 821, 853 |
| BpmI | CTGGAG | 3 cut(s) | 390, 1320, 1425 |
| BpuEI | CTTGAG | 1 cut(s) | 1540 |
| BpuMI | CCSGG | 2 cut(s) | 1269, 1270 |
| BsaAI | YACGTR | 1 cut(s) | 653 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1374 |
| BsaHI | GRCGYC | 1 cut(s) | 254 |
| BsaJI | CCNNGG | 6 cut(s) | 248, 473, 1086, 1195, 1268, 1385 |
| BsaWI | WCCGGW | 1 cut(s) | 148 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1331, 1361 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 118, 249, 578, 597, 598, 754, 1304, 1386, 1387 |
| Bse118I | RCCGGY | 2 cut(s) | 43, 283 |
| Bse21I | CCTNAGG | 1 cut(s) | 1179 |
| Bse3DI | GCAATG | 2 cut(s) | 690, 888 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1374 |
| BseBI | CCWGG | 4 cut(s) | 92, 749, 1088, 1299 |
| BseDI | CCNNGG | 6 cut(s) | 248, 473, 1086, 1195, 1268, 1385 |
| BseJI | GATNNNNATC | 1 cut(s) | 1374 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 118, 249, 578, 597, 598, 754, 1304, 1386, 1387 |
| BseMI | GCAATG | 2 cut(s) | 690, 888 |
| BseMII | CTCAG | 1 cut(s) | 464 |
| BseRI | GAGGAG | 2 cut(s) | 20, 1513 |
| BseSI | GKGCMC | 1 cut(s) | 1269 |
| BseXI | GCAGC | 3 cut(s) | 251, 586, 721 |
| Bsh1236I | CGCG | 2 cut(s) | 755, 1387 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1061 |
| BshFI | GGCC | 7 cut(s) | 218, 330, 472, 590, 769, 1200, 1267 |
| BshNI | GGYRCC | 3 cut(s) | 191, 1090, 1220 |
| BsiEI | CGRYCG | 1 cut(s) | 1061 |
| BsiHKCI | CYCGRG | 2 cut(s) | 308, 1268 |
| BsiSI | CCGG | 4 cut(s) | 44, 149, 284, 1269 |
| BslFI | GGGAC | 1 cut(s) | 1027 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 118, 249, 578, 597, 598, 754, 1304, 1386, 1387 |
| BsmAI | GTCTC | 4 cut(s) | 231, 451, 1585, 1591 |
| BsmBI | CGTCTC | 2 cut(s) | 231, 1585 |
| BsmFI | GGGAC | 1 cut(s) | 1027 |
| BsmI | GAATGC | 1 cut(s) | 1212 |
| BsnI | GGCC | 7 cut(s) | 218, 330, 472, 590, 769, 1200, 1267 |
| BsoBI | CYCGRG | 2 cut(s) | 308, 1268 |
| Bsp120I | GGGCCC | 1 cut(s) | 1265 |
| Bsp1286I | GDGCHC | 2 cut(s) | 350, 1269 |
| Bsp143I | GATC | 5 cut(s) | 1081, 1139, 1237, 1375, 1421 |
| BspANI | GGCC | 7 cut(s) | 218, 330, 472, 590, 769, 1200, 1267 |
| BspCNI | CTCAG | 1 cut(s) | 463 |
| BspFNI | CGCG | 2 cut(s) | 755, 1387 |
| BspPI | GGATC | 4 cut(s) | 1076, 1089, 1232, 1370 |
| BspT107I | GGYRCC | 3 cut(s) | 191, 1090, 1220 |
| BsrBI | CCGCTC | 1 cut(s) | 315 |
| BsrDI | GCAATG | 2 cut(s) | 690, 888 |
| BsrFI | RCCGGY | 2 cut(s) | 43, 283 |
| BssAI | RCCGGY | 2 cut(s) | 43, 283 |
| BssECI | CCNNGG | 6 cut(s) | 248, 473, 1086, 1195, 1268, 1385 |
| BssMI | GATC | 5 cut(s) | 1081, 1139, 1237, 1375, 1421 |
| BssNI | GRCGYC | 1 cut(s) | 254 |
| BssT1I | CCWWGG | 1 cut(s) | 1195 |
| Bst2UI | CCWGG | 4 cut(s) | 92, 749, 1088, 1299 |
| Bst4CI | ACNGT | 2 cut(s) | 225, 1062 |
| Bst6I | CTCTTC | 2 cut(s) | 60, 1430 |
| BstACI | GRCGYC | 1 cut(s) | 254 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 583 |
| BstBAI | YACGTR | 1 cut(s) | 653 |
| BstC8I | GCNNGC | 5 cut(s) | 12, 285, 424, 588, 1292 |
| BstDEI | CTNAG | 3 cut(s) | 450, 762, 1179 |
| BstDSI | CCRYGG | 1 cut(s) | 1385 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1302 |
| BstFNI | CGCG | 2 cut(s) | 755, 1387 |
| BstH2I | RGCGCY | 1 cut(s) | 50 |
| BstHHI | GCGC | 2 cut(s) | 49, 146 |
| BstKTI | GATC | 5 cut(s) | 1084, 1142, 1240, 1378, 1424 |
| BstMAI | GTCTC | 4 cut(s) | 231, 451, 1585, 1591 |
| BstMBI | GATC | 5 cut(s) | 1081, 1139, 1237, 1375, 1421 |
| BstMCI | CGRYCG | 1 cut(s) | 1061 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 200, 253, 280, 583, 775, 1333 |
| BstNI | CCWGG | 4 cut(s) | 92, 749, 1088, 1299 |
| BstSCI | CCNGG | 6 cut(s) | 90, 747, 1086, 1267, 1268, 1297 |
| BstSLI | GKGCMC | 1 cut(s) | 1269 |
| BstUI | CGCG | 2 cut(s) | 755, 1387 |
| BstV1I | GCAGC | 3 cut(s) | 251, 586, 721 |
| BstX2I | RGATCY | 1 cut(s) | 1081 |
| BstYI | RGATCY | 1 cut(s) | 1081 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1179 |
| BsuRI | GGCC | 7 cut(s) | 218, 330, 472, 590, 769, 1200, 1267 |
| BtgI | CCRYGG | 1 cut(s) | 1385 |
| Cac8I | GCNNGC | 5 cut(s) | 12, 285, 424, 588, 1292 |
| CfoI | GCGC | 2 cut(s) | 49, 146 |
| Cfr10I | RCCGGY | 2 cut(s) | 43, 283 |
| Cfr13I | GGNCC | 9 cut(s) | 216, 328, 498, 589, 725, 1014, 1199, 1265, 1266 |
| Cfr42I | CCGCGG | 1 cut(s) | 1388 |
| Cfr9I | CCCGGG | 1 cut(s) | 1268 |
| CseI | GACGC | 3 cut(s) | 262, 761, 975 |
| Csp6I | GTAC | 2 cut(s) | 231, 1221 |
| CviAII | CATG | 2 cut(s) | 877, 1328 |
| CviQI | GTAC | 2 cut(s) | 231, 1221 |
| DdeI | CTNAG | 3 cut(s) | 450, 762, 1179 |
| DpnI | GATC | 5 cut(s) | 1083, 1141, 1239, 1377, 1423 |
| DpnII | GATC | 5 cut(s) | 1081, 1139, 1237, 1375, 1421 |
| DraI | TTTAAA | 2 cut(s) | 1024, 1453 |
| Eam1104I | CTCTTC | 2 cut(s) | 60, 1430 |
| EarI | CTCTTC | 2 cut(s) | 60, 1430 |
| EciI | GGCGGA | 1 cut(s) | 66 |
| Eco130I | CCWWGG | 1 cut(s) | 1195 |
| Eco24I | GRGCYC | 2 cut(s) | 350, 1269 |
| Eco47I | GGWCC | 3 cut(s) | 498, 725, 1014 |
| Eco57I | CTGAAG | 5 cut(s) | 341, 414, 900, 966, 1301 |
| Eco81I | CCTNAGG | 1 cut(s) | 1179 |
| Eco88I | CYCGRG | 2 cut(s) | 308, 1268 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1302 |
| EcoO109I | RGGNCCY | 4 cut(s) | 498, 589, 1014, 1265 |
| EcoRII | CCWGG | 4 cut(s) | 90, 747, 1086, 1297 |
| EcoT14I | CCWWGG | 1 cut(s) | 1195 |
| EcoT38I | GRGCYC | 2 cut(s) | 350, 1269 |
| ErhI | CCWWGG | 1 cut(s) | 1195 |
| Esp3I | CGTCTC | 2 cut(s) | 231, 1585 |
| FaeI | CATG | 2 cut(s) | 880, 1331 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1172, 1204 |
| FaqI | GGGAC | 1 cut(s) | 1027 |
| FatI | CATG | 2 cut(s) | 876, 1327 |
| FauI | CCCGC | 3 cut(s) | 308, 532, 1380 |
| Fnu4HI | GCNGC | 7 cut(s) | 80, 162, 240, 257, 575, 735, 1385 |
| FriOI | GRGCYC | 2 cut(s) | 350, 1269 |
| Fsp4HI | GCNGC | 7 cut(s) | 80, 162, 240, 257, 575, 735, 1385 |
| FspBI | CTAG | 6 cut(s) | 528, 597, 1196, 1274, 1322, 1536 |
| GlaI | GCGC | 2 cut(s) | 48, 145 |
| GluI | GCNGC | 7 cut(s) | 80, 162, 240, 257, 575, 735, 1385 |
| GsuI | CTGGAG | 3 cut(s) | 390, 1320, 1425 |
| HaeII | RGCGCY | 1 cut(s) | 50 |
| HaeIII | GGCC | 7 cut(s) | 218, 330, 472, 590, 769, 1200, 1267 |
| HapII | CCGG | 4 cut(s) | 44, 149, 284, 1269 |
| HgaI | GACGC | 3 cut(s) | 262, 761, 975 |
| HhaI | GCGC | 2 cut(s) | 49, 146 |
| Hin1I | GRCGYC | 1 cut(s) | 254 |
| Hin1II | CATG | 2 cut(s) | 880, 1331 |
| Hin6I | GCGC | 2 cut(s) | 47, 144 |
| HinP1I | GCGC | 2 cut(s) | 47, 144 |
| HindIII | AAGCTT | 1 cut(s) | 909 |
| HinfI | GANTC | 2 cut(s) | 95, 1397 |
| HpaII | CCGG | 4 cut(s) | 44, 149, 284, 1269 |
| HphI | GGTGA | 4 cut(s) | 213, 254, 649, 1499 |
| Hpy166II | GTNNAC | 5 cut(s) | 154, 233, 379, 835, 946 |
| Hpy188I | TCNGA | 3 cut(s) | 919, 985, 1134 |
| Hpy188III | TCNNGA | 6 cut(s) | 290, 310, 343, 407, 505, 1428 |
| Hpy8I | GTNNAC | 5 cut(s) | 154, 233, 379, 835, 946 |
| Hpy99I | CGWCG | 2 cut(s) | 188, 200 |
| HpyAV | CCTTC | 6 cut(s) | 511, 1425, 1435, 1465, 1525, 1561 |
| HpyCH4III | ACNGT | 2 cut(s) | 225, 1062 |
| HpyCH4IV | ACGT | 5 cut(s) | 186, 442, 652, 1104, 1244 |
| HpyCH4V | TGCA | 7 cut(s) | 14, 239, 480, 586, 889, 1002, 1350 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 200, 253, 280, 583, 775, 1333 |
| HpyF3I | CTNAG | 3 cut(s) | 450, 762, 1179 |
| HpySE526I | ACGT | 5 cut(s) | 186, 442, 652, 1104, 1244 |
| Hsp92I | GRCGYC | 1 cut(s) | 254 |
| Hsp92II | CATG | 2 cut(s) | 880, 1331 |
| HspAI | GCGC | 2 cut(s) | 47, 144 |
| KpnI | GGTACC | 1 cut(s) | 1224 |
| KroI | GCCGGC | 1 cut(s) | 283 |
| KroNI | GCCGGC | 1 cut(s) | 285 |
| KspI | CCGCGG | 1 cut(s) | 1388 |
| Kzo9I | GATC | 5 cut(s) | 1081, 1139, 1237, 1375, 1421 |
| LmnI | GCTCC | 5 cut(s) | 7, 151, 298, 1209, 1301 |
| Lsp1109I | GCAGC | 3 cut(s) | 251, 586, 721 |
| LweI | GCATC | 1 cut(s) | 861 |
| MaeI | CTAG | 6 cut(s) | 528, 597, 1196, 1274, 1322, 1536 |
| MaeII | ACGT | 5 cut(s) | 186, 442, 652, 1104, 1244 |
| MaeIII | GTNAC | 2 cut(s) | 121, 606 |
| MalI | GATC | 5 cut(s) | 1083, 1141, 1239, 1377, 1423 |
| MbiI | CCGCTC | 1 cut(s) | 315 |
| MboI | GATC | 5 cut(s) | 1081, 1139, 1237, 1375, 1421 |
| MboII | GAAGA | 8 cut(s) | 47, 166, 422, 512, 906, 1447, 1591, 1594 |
| MfeI | CAATTG | 2 cut(s) | 1351, 1618 |
| MflI | RGATCY | 1 cut(s) | 1081 |
| MhlI | GDGCHC | 2 cut(s) | 350, 1269 |
| MluCI | AATT | 8 cut(s) | 211, 338, 372, 821, 971, 1227, 1351, 1618 |
| MmeI | TCCRAC | 1 cut(s) | 425 |
| MroNI | GCCGGC | 1 cut(s) | 283 |
| MseI | TTAA | 7 cut(s) | 666, 791, 797, 824, 1023, 1122, 1452 |
| MslI | CAYNNNNRTG | 1 cut(s) | 881 |
| MspA1I | CMGCKG | 1 cut(s) | 1387 |
| MspI | CCGG | 4 cut(s) | 44, 149, 284, 1269 |
| MspR9I | CCNGG | 6 cut(s) | 92, 749, 1088, 1269, 1270, 1299 |
| MunI | CAATTG | 2 cut(s) | 1351, 1618 |
| Mva1269I | GAATGC | 1 cut(s) | 1212 |
| MvaI | CCWGG | 4 cut(s) | 92, 749, 1088, 1299 |
| MvnI | CGCG | 2 cut(s) | 755, 1387 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 200, 253, 280, 583, 775, 1333 |
| NaeI | GCCGGC | 1 cut(s) | 285 |
| NciI | CCSGG | 2 cut(s) | 1269, 1270 |
| NdeII | GATC | 5 cut(s) | 1081, 1139, 1237, 1375, 1421 |
| NgoMIV | GCCGGC | 1 cut(s) | 283 |
| NlaIII | CATG | 2 cut(s) | 880, 1331 |
| NmeAIII | GCCGAG | 3 cut(s) | 229, 268, 273 |
| NmuCI | GTSAC | 1 cut(s) | 606 |
| PaeR7I | CTCGAG | 1 cut(s) | 308 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 192 |
| PctI | GAATGC | 1 cut(s) | 1212 |
| PdiI | GCCGGC | 1 cut(s) | 285 |
| PfeI | GAWTC | 2 cut(s) | 95, 1397 |
| PfoI | TCCNGGA | 2 cut(s) | 747, 1297 |
| PkrI | GCNGC | 7 cut(s) | 81, 163, 241, 258, 576, 736, 1386 |
| Ppu21I | YACGTR | 1 cut(s) | 653 |
| PpuMI | RGGWCCY | 2 cut(s) | 498, 1014 |
| Psp5II | RGGWCCY | 2 cut(s) | 498, 1014 |
| Psp6I | CCWGG | 4 cut(s) | 90, 747, 1086, 1297 |
| PspGI | CCWGG | 4 cut(s) | 90, 747, 1086, 1297 |
| PspOMI | GGGCCC | 1 cut(s) | 1265 |
| PspPI | GGNCC | 9 cut(s) | 216, 328, 498, 589, 725, 1014, 1199, 1265, 1266 |
| PspPPI | RGGWCCY | 2 cut(s) | 498, 1014 |
| PsuI | RGATCY | 1 cut(s) | 1081 |
| RsaI | GTAC | 2 cut(s) | 232, 1222 |
| RsaNI | GTAC | 2 cut(s) | 231, 1221 |
| RseI | CAYNNNNRTG | 1 cut(s) | 881 |
| SacII | CCGCGG | 1 cut(s) | 1388 |
| SaqAI | TTAA | 7 cut(s) | 666, 791, 797, 824, 1023, 1122, 1452 |
| SatI | GCNGC | 7 cut(s) | 80, 162, 240, 257, 575, 735, 1385 |
| Sau3AI | GATC | 5 cut(s) | 1081, 1139, 1237, 1375, 1421 |
| Sau96I | GGNCC | 9 cut(s) | 216, 328, 498, 589, 725, 1014, 1199, 1265, 1266 |
| ScrFI | CCNGG | 6 cut(s) | 92, 749, 1088, 1269, 1270, 1299 |
| SduI | GDGCHC | 2 cut(s) | 350, 1269 |
| SfaNI | GCATC | 1 cut(s) | 861 |
| Sfr274I | CTCGAG | 1 cut(s) | 308 |
| Sfr303I | CCGCGG | 1 cut(s) | 1388 |
| SgrBI | CCGCGG | 1 cut(s) | 1388 |
| SinI | GGWCC | 3 cut(s) | 498, 725, 1014 |
| SlaI | CTCGAG | 1 cut(s) | 308 |
| SmaI | CCCGGG | 1 cut(s) | 1270 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 881 |
| SmlI | CTYRAG | 2 cut(s) | 308, 1555 |
| SmoI | CTYRAG | 2 cut(s) | 308, 1555 |
| SrfI | GCCCGGGC | 1 cut(s) | 1270 |
| Sse9I | AATT | 8 cut(s) | 211, 338, 372, 821, 971, 1227, 1351, 1618 |
| SspMI | CTAG | 6 cut(s) | 528, 597, 1196, 1274, 1322, 1536 |
| StyD4I | CCNGG | 6 cut(s) | 90, 747, 1086, 1267, 1268, 1297 |
| StyI | CCWWGG | 1 cut(s) | 1195 |
| TaaI | ACNGT | 2 cut(s) | 225, 1062 |
| TaiI | ACGT | 5 cut(s) | 189, 445, 655, 1107, 1247 |
| TaqI | TCGA | 3 cut(s) | 183, 309, 1077 |
| TasI | AATT | 8 cut(s) | 211, 338, 372, 821, 971, 1227, 1351, 1618 |
| TauI | GCSGC | 4 cut(s) | 82, 164, 259, 1387 |
| TfiI | GAWTC | 2 cut(s) | 95, 1397 |
| Tru1I | TTAA | 7 cut(s) | 666, 791, 797, 824, 1023, 1122, 1452 |
| Tru9I | TTAA | 7 cut(s) | 666, 791, 797, 824, 1023, 1122, 1452 |
| TseFI | GTSAC | 1 cut(s) | 606 |
| TseI | GCWGC | 3 cut(s) | 239, 574, 734 |
| Tsp45I | GTSAC | 1 cut(s) | 606 |
| TspDTI | ATGAA | 4 cut(s) | 353, 1033, 1560, 1592 |
| TspGWI | ACGGA | 2 cut(s) | 94, 1609 |
| TspMI | CCCGGG | 1 cut(s) | 1268 |
| VpaK11BI | GGWCC | 3 cut(s) | 498, 725, 1014 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1302 |
| XapI | RAATTY | 1 cut(s) | 338 |
| XhoI | CTCGAG | 1 cut(s) | 308 |
| XmaI | CCCGGG | 1 cut(s) | 1268 |
| XmaJI | CCTAGG | 1 cut(s) | 1195 |
| XspI | CTAG | 6 cut(s) | 528, 597, 1196, 1274, 1322, 1536 |