MD11G1265400.v1.1

Plant protein of unknown function (DUF641)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
38062835 .. 38067756
4922 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1265400.v1.1.491

Sequence Viewer

Length: 1626 bp
ATGATGGATTCGGTGAGACCATCATCTGTGACCCCGAATAAGAGTAGATTCGCACGTACTATTGCTAAAGTTCTTCATCTTCGGGCTGCAACAGGTATTGCCCCAGTCGATGGGGTTCAAAAAGTCAAGTCCCAAGAATTCAGAATTCCGAAGGTTAAGTCCCAAGAATTCGGAATTCCGGACGTTAAGTCCCAGGAGTTCGGAGTTCAGAAGTTTAAGTCCCAGGAGTTCGGAGTTCAGAAAGTAAAGTCCCAAGAATTCAAAGTTCAGAAGGTTAAATCCCAAGAATTTGGAGGTCATAAGGTAAACTACCAAGAAAATGGAGTGCAGAAGGGGAAGTCTCAAGAAATTGGAATTCAGAAAGTCAAGTCCCAAGAAAATGTCAAAAATGACCGGAATGGTGGTAAGGTTATGGTTGGTCGGTCTGAGTCATTTGACAAGAACAATGAGGAGCTTCAGGAAAGAGTCGCCCTTGAGGCTCTTGTAGCGAAACTGTTTGCAAGCGTTTCATCTGTCAAAGCTGCGTATGCACAACTACAGTATGCTCAGTCTCCCTATGATGGTGAAGGAATCCAAGCTGCTGACAAAGAGGTAGTCTCCGAGTTGAAGAACTTGTCTGAGTTGAAGCGGTGTTTCTTAAAAAAGCAGTTTGATCCTAAACCTGAGACTACACTGGTTTTGGCTGAGATCGAGGAGCAGAAGAGTGTTCTAAAAACCTATGAAATCATGGGGAAAAAGTTGGAATCTCAGGTGAGGCTTAAGGACTCTGAAATTGTGTTTCTTGGAGAAAAGTTAGAGGAGGCCAAGAATCAGAATAAGTTGCTGGAGAGAAGATTAAACCAGAGTGGGCAGCTACATGTGTACAATCTTCAGTTATCTGGTTCAAGTCCTAACCATTTCATTACTGTTCTCCGACACACAGTAAAGTCCATTCGGAGCTATGTTAGGATGATGATGGATGATATGAAATCTACCGGTTGGGACATTCATGCAGCAGCTAAAGCGATTGACCGCAATGTGGTTTATTGGAAAGAAGACCACAAGTGTTTTGCATTCGAACACTTTGTTTGCAAGGAAATGTTCGATGCTTTCCAGCATCCCAACTTCTTACTCCCAAATGAGTCCTTGCCAGAGAAAAAGAAACAACAGCAGCAGCTCTTTTTTGTGAGATTTACGGAGCTCAAATCAATGAAGCCGAAGGAGTACCTTGCCCAGAATCCCAGATCAGCATTTGCTAAGTTCTGCCGTGTCAAGTACTTACGACTGGTGCATCCCAAGATGGAAACATCATTTTTCGGCAATCTGAATCAAAGAAACCTCATCAATGCAGGTGAGTTTCCGAGCTCTAATTTCTTTACTTCGTTTGCTGAAATGGCGAAACGTGTCTGGCTCCTGCATTGCTTGGCCTTCTCCTTCAATCCTGAAGCCGCAATCTTCCAAGTAAGCAAGGGATGCCGATTTTCAGAAGTGTACATGGAAAGCTTAGCTGACGAAGCGTTCCTCTCAACAACATCTGAACCGCAGGTGGGATTCACAGTTGTTCCGGGATTCAGACTCGGTAAATCTGTCATTCAGTGCCAAGTTTACCTCACTCGGTTGCAATCCGCTCCGACAAAGCAAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

542

Amino Acids

61.82

Weight (kDa)

9.5

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF641 PF04859 155 - 278 7.5e-46 Plant protein of unknown function (DUF641)
GIL1_IRKI_C PF24994 478 - 529 1.8e-23 GIL1/IRKI C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1319, 1513
Acc36I ACCTGC 2 cut(s) 1319, 1513
AccB7I CCANNNNNTGG 1 cut(s) 110
AccBSI CCGCTC 1 cut(s) 1607
AccIII TCCGGA 1 cut(s) 178
AciI CCGC 5 cut(s) 628, 1012, 1428, 1520, 1605
AclWI GGATC 1 cut(s) 647
AcsI RAATTY 7 cut(s) 137, 144, 167, 174, 257, 287, 354
AcuI CTGAAG 3 cut(s) 440, 854, 1443
AfaI GTAC 5 cut(s) 58, 863, 1205, 1256, 1472
AfiI CCNNNNNNNGG 4 cut(s) 110, 560, 1018, 1526
AflII CTTAAG 1 cut(s) 758
AflIII ACRYGT 2 cut(s) 856, 1381
AgeI ACCGGT 1 cut(s) 974
AgsI TTSAA 6 cut(s) 119, 262, 607, 625, 885, 1417
AhdI GACNNNNNGTC 1 cut(s) 187
AjnI CCWGG 2 cut(s) 192, 222
Alw21I GWGCWC 2 cut(s) 1182, 1346
Alw26I GTCTC 5 cut(s) 10, 345, 555, 601, 659
AlwI GGATC 1 cut(s) 647
Aor13HI TCCGGA 1 cut(s) 178
AoxI GGCC 2 cut(s) 801, 1404
ApeKI GCWGC 8 cut(s) 86, 521, 578, 850, 992, 995, 1150, 1153
ApoI RAATTY 7 cut(s) 137, 144, 167, 174, 257, 287, 354
ArsI GACNNNNNNTTYG 4 cut(s) 143, 175, 579, 611
AsiGI ACCGGT 1 cut(s) 974
AsuC2I CCSGG 1 cut(s) 1545
AsuHPI GGTGA 4 cut(s) 25, 575, 763, 1343
AsuII TTCGAA 1 cut(s) 1056
BanII GRGCYC 2 cut(s) 1182, 1346
BbsI GAAGAC 1 cut(s) 1041
Bbv12I GWGCWC 2 cut(s) 1182, 1346
BbvI GCAGC 8 cut(s) 73, 508, 565, 862, 1004, 1007, 1162, 1165
BccI CCATC 5 cut(s) 28, 104, 554, 949, 1273
BceAI ACGGC 1 cut(s) 1230
BciT130I CCWGG 2 cut(s) 194, 224
BcnI CCSGG 1 cut(s) 1545
BcoDI GTCTC 5 cut(s) 10, 345, 555, 601, 659
BfmI CTRYAG 1 cut(s) 536
BfrI CTTAAG 1 cut(s) 758
BfuAI ACCTGC 2 cut(s) 1319, 1513
BglI GCCNNNNNGGC 1 cut(s) 476
BisI GCNGC 9 cut(s) 87, 522, 579, 851, 993, 996, 1151, 1154, 1428
BlpI GCTNAGC 1 cut(s) 1483
BlsI GCNGC 9 cut(s) 88, 523, 580, 852, 994, 997, 1152, 1155, 1429
BmcAI AGTACT 1 cut(s) 1256
Bme1390I CCNGG 3 cut(s) 194, 224, 1545
BmeRI GACNNNNNGTC 1 cut(s) 187
BmiI GGNNCC 1 cut(s) 1391
BmrFI CCNGG 3 cut(s) 194, 224, 1545
BmrI ACTGGG 1 cut(s) 98
BmsI GCATC 4 cut(s) 1075, 1105, 1279, 1442
BmuI ACTGGG 1 cut(s) 98
BpiI GAAGAC 1 cut(s) 1041
BplI GAGNNNNNCTC 2 cut(s) 581, 613
BpmI CTGGAG 1 cut(s) 845
Bpu1102I GCTNAGC 1 cut(s) 1483
Bpu14I TTCGAA 1 cut(s) 1056
BpuEI CTTGAG 2 cut(s) 327, 494
BpuMI CCSGG 1 cut(s) 1545
BsaAI YACGTR 1 cut(s) 56
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 2 cut(s) 192, 222
BsaWI WCCGGW 3 cut(s) 178, 393, 974
Bsc4I CCNNNNNNNGG 4 cut(s) 110, 560, 1018, 1526
Bse118I RCCGGY 1 cut(s) 974
Bse1I ACTGG 3 cut(s) 104, 678, 1269
Bse3DI GCAATG 2 cut(s) 1021, 1396
BseAI TCCGGA 1 cut(s) 178
BseBI CCWGG 2 cut(s) 194, 224
BseDI CCNNGG 2 cut(s) 192, 222
BseGI GGATG 5 cut(s) 954, 964, 1096, 1270, 1457
BseLI CCNNNNNNNGG 4 cut(s) 110, 560, 1018, 1526
BseMI GCAATG 2 cut(s) 1021, 1396
BseMII CTCAG 6 cut(s) 417, 560, 609, 654, 675, 761
BseNI ACTGG 3 cut(s) 104, 678, 1269
BseRI GAGGAG 3 cut(s) 464, 707, 812
BseXI GCAGC 8 cut(s) 73, 508, 565, 862, 1004, 1007, 1162, 1165
BsgI GTGCAG 1 cut(s) 347
BshFI GGCC 2 cut(s) 803, 1406
BshTI ACCGGT 1 cut(s) 974
BsiHKAI GWGCWC 2 cut(s) 1182, 1346
BsiSI CCGG 4 cut(s) 179, 394, 975, 1544
BslFI GGGAC 7 cut(s) 115, 145, 175, 205, 235, 355, 995
BslI CCNNNNNNNGG 4 cut(s) 110, 560, 1018, 1526
BsmAI GTCTC 5 cut(s) 10, 345, 555, 601, 659
BsmFI GGGAC 7 cut(s) 115, 145, 175, 205, 235, 355, 995
BsmI GAATGC 1 cut(s) 1052
BsnI GGCC 2 cut(s) 803, 1406
Bso31I GGTCTC 1 cut(s) 10
Bsp119I TTCGAA 1 cut(s) 1056
Bsp1286I GDGCHC 2 cut(s) 1182, 1346
Bsp13I TCCGGA 1 cut(s) 178
Bsp1407I TGTACA 2 cut(s) 861, 1470
Bsp143I GATC 3 cut(s) 652, 687, 1223
Bsp1720I GCTNAGC 1 cut(s) 1483
BspACI CCGC 5 cut(s) 628, 1012, 1428, 1520, 1605
BspANI GGCC 2 cut(s) 803, 1406
BspCNI CTCAG 6 cut(s) 418, 559, 610, 655, 676, 760
BspEI TCCGGA 1 cut(s) 178
BspLI GGNNCC 1 cut(s) 1391
BspMI ACCTGC 2 cut(s) 1319, 1513
BspPI GGATC 1 cut(s) 647
BspT104I TTCGAA 1 cut(s) 1056
BspTI CTTAAG 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 10
BsrBI CCGCTC 1 cut(s) 1607
BsrDI GCAATG 2 cut(s) 1021, 1396
BsrFI RCCGGY 1 cut(s) 974
BsrGI TGTACA 2 cut(s) 861, 1470
BsrI ACTGG 3 cut(s) 104, 678, 1269
BssAI RCCGGY 1 cut(s) 974
BssECI CCNNGG 2 cut(s) 192, 222
BssMI GATC 3 cut(s) 652, 687, 1223
Bst2UI CCWGG 2 cut(s) 194, 224
Bst4CI ACNGT 5 cut(s) 495, 540, 907, 922, 1537
Bst6I CTCTTC 1 cut(s) 695
BstAFI CTTAAG 1 cut(s) 758
BstAPI GCANNNNNTGC 1 cut(s) 1452
BstAUI TGTACA 2 cut(s) 861, 1470
BstBAI YACGTR 1 cut(s) 56
BstBI TTCGAA 1 cut(s) 1056
BstC8I GCNNGC 1 cut(s) 502
BstDEI CTNAG 8 cut(s) 426, 546, 618, 663, 684, 747, 1236, 1483
BstF5I GGATG 5 cut(s) 954, 964, 1096, 1270, 1457
BstKTI GATC 3 cut(s) 655, 690, 1226
BstMAI GTCTC 5 cut(s) 10, 345, 555, 601, 659
BstMBI GATC 3 cut(s) 652, 687, 1223
BstMWI GCNNNNNNNGC 7 cut(s) 476, 485, 527, 1001, 1373, 1452, 1493
BstNI CCWGG 2 cut(s) 194, 224
BstNSI RCATGY 1 cut(s) 860
BstSCI CCNGG 3 cut(s) 192, 222, 1543
BstSFI CTRYAG 1 cut(s) 536
BstV1I GCAGC 8 cut(s) 73, 508, 565, 862, 1004, 1007, 1162, 1165
BstV2I GAAGAC 1 cut(s) 1041
BstXI CCANNNNNNTGG 2 cut(s) 290, 320
BsuRI GGCC 2 cut(s) 803, 1406
BtsCI GGATG 5 cut(s) 954, 964, 1096, 1270, 1457
BtsIMutI CAGTG 2 cut(s) 671, 1580
BveI ACCTGC 2 cut(s) 1319, 1513
Cac8I GCNNGC 1 cut(s) 502
Cfr10I RCCGGY 1 cut(s) 974
Csp6I GTAC 5 cut(s) 57, 862, 1204, 1255, 1471
CspAI ACCGGT 1 cut(s) 974
CviAII CATG 4 cut(s) 727, 857, 989, 1474
CviQI GTAC 5 cut(s) 57, 862, 1204, 1255, 1471
DdeI CTNAG 8 cut(s) 426, 546, 618, 663, 684, 747, 1236, 1483
DpnI GATC 3 cut(s) 654, 689, 1225
DpnII GATC 3 cut(s) 652, 687, 1223
DriI GACNNNNNGTC 1 cut(s) 187
Eam1104I CTCTTC 1 cut(s) 695
Eam1105I GACNNNNNGTC 1 cut(s) 187
EarI CTCTTC 1 cut(s) 695
Ecl136II GAGCTC 2 cut(s) 1180, 1344
Eco24I GRGCYC 2 cut(s) 1182, 1346
Eco31I GGTCTC 1 cut(s) 10
Eco53kI GAGCTC 2 cut(s) 1180, 1344
Eco57I CTGAAG 3 cut(s) 440, 854, 1443
EcoICRI GAGCTC 2 cut(s) 1180, 1344
EcoRI GAATTC 6 cut(s) 137, 144, 167, 174, 257, 354
EcoRII CCWGG 2 cut(s) 192, 222
EcoT38I GRGCYC 2 cut(s) 1182, 1346
FaeI CATG 4 cut(s) 730, 860, 992, 1477
FaqI GGGAC 7 cut(s) 115, 145, 175, 205, 235, 355, 995
FatI CATG 4 cut(s) 726, 856, 988, 1473
Fnu4HI GCNGC 9 cut(s) 87, 522, 579, 851, 993, 996, 1151, 1154, 1428
FokI GGATG 5 cut(s) 961, 971, 1083, 1257, 1464
FriOI GRGCYC 2 cut(s) 1182, 1346
Fsp4HI GCNGC 9 cut(s) 87, 522, 579, 851, 993, 996, 1151, 1154, 1428
GluI GCNGC 9 cut(s) 87, 522, 579, 851, 993, 996, 1151, 1154, 1428
GsuI CTGGAG 1 cut(s) 845
HaeIII GGCC 2 cut(s) 803, 1406
HapII CCGG 4 cut(s) 179, 394, 975, 1544
Hin1II CATG 4 cut(s) 730, 860, 992, 1477
HindIII AAGCTT 1 cut(s) 1480
HpaII CCGG 4 cut(s) 179, 394, 975, 1544
HphI GGTGA 4 cut(s) 25, 575, 763, 1343
Hpy166II GTNNAC 4 cut(s) 307, 862, 1471, 1585
Hpy188III TCNNGA 4 cut(s) 179, 344, 458, 1421
Hpy8I GTNNAC 4 cut(s) 307, 862, 1471, 1585
HpyAV CCTTC 7 cut(s) 145, 265, 325, 560, 1192, 1417, 1423
HpyCH4III ACNGT 5 cut(s) 495, 540, 907, 922, 1537
HpyCH4IV ACGT 3 cut(s) 55, 183, 1381
HpyF10VI GCNNNNNNNGC 7 cut(s) 476, 485, 527, 1001, 1373, 1452, 1493
HpyF3I CTNAG 8 cut(s) 426, 546, 618, 663, 684, 747, 1236, 1483
HpySE526I ACGT 3 cut(s) 55, 183, 1381
Hsp92II CATG 4 cut(s) 730, 860, 992, 1477
Kpn2I TCCGGA 1 cut(s) 178
Kzo9I GATC 3 cut(s) 652, 687, 1223
LmnI GCTCC 6 cut(s) 451, 694, 936, 1177, 1395, 1612
Lsp1109I GCAGC 8 cut(s) 73, 508, 565, 862, 1004, 1007, 1162, 1165
LweI GCATC 4 cut(s) 1075, 1105, 1279, 1442
MaeII ACGT 3 cut(s) 55, 183, 1381
MaeIII GTNAC 1 cut(s) 28
MalI GATC 3 cut(s) 654, 689, 1225
MbiI CCGCTC 1 cut(s) 1607
MboI GATC 3 cut(s) 652, 687, 1223
MboII GAAGA 8 cut(s) 65, 71, 619, 712, 843, 860, 1046, 1426
MhlI GDGCHC 2 cut(s) 1182, 1346
MlyI GAGTC 5 cut(s) 437, 474, 758, 1130, 1548
MmeI TCCRAC 2 cut(s) 720, 937
MroI TCCGGA 1 cut(s) 178
MseI TTAA 7 cut(s) 156, 186, 216, 276, 638, 759, 836
MspCI CTTAAG 1 cut(s) 758
MspI CCGG 4 cut(s) 179, 394, 975, 1544
MspR9I CCNGG 3 cut(s) 194, 224, 1545
Mva1269I GAATGC 1 cut(s) 1052
MvaI CCWGG 2 cut(s) 194, 224
MwoI GCNNNNNNNGC 7 cut(s) 476, 485, 527, 1001, 1373, 1452, 1493
NciI CCSGG 1 cut(s) 1545
NdeII GATC 3 cut(s) 652, 687, 1223
NlaIII CATG 4 cut(s) 730, 860, 992, 1477
NlaIV GGNNCC 1 cut(s) 1391
NmuCI GTSAC 1 cut(s) 28
NspI RCATGY 1 cut(s) 860
NspV TTCGAA 1 cut(s) 1056
PaqCI CACCTGC 2 cut(s) 1319, 1513
PciI ACATGT 1 cut(s) 856
PctI GAATGC 1 cut(s) 1052
PfeI GAWTC 9 cut(s) 8, 48, 570, 743, 808, 1216, 1306, 1530, 1548
PflMI CCANNNNNTGG 1 cut(s) 110
PfoI TCCNGGA 1 cut(s) 1543
PinAI ACCGGT 1 cut(s) 974
PkrI GCNGC 9 cut(s) 88, 523, 580, 852, 994, 997, 1152, 1155, 1429
PleI GAGTC 5 cut(s) 436, 473, 758, 1129, 1548
PpsI GAGTC 5 cut(s) 436, 473, 758, 1129, 1548
Ppu21I YACGTR 1 cut(s) 56
PscI ACATGT 1 cut(s) 856
Psp124BI GAGCTC 2 cut(s) 1182, 1346
Psp6I CCWGG 2 cut(s) 192, 222
PspGI CCWGG 2 cut(s) 192, 222
PspN4I GGNNCC 1 cut(s) 1391
RsaI GTAC 5 cut(s) 58, 863, 1205, 1256, 1472
RsaNI GTAC 5 cut(s) 57, 862, 1204, 1255, 1471
SacI GAGCTC 2 cut(s) 1182, 1346
SaqAI TTAA 7 cut(s) 156, 186, 216, 276, 638, 759, 836
SatI GCNGC 9 cut(s) 87, 522, 579, 851, 993, 996, 1151, 1154, 1428
Sau3AI GATC 3 cut(s) 652, 687, 1223
ScaI AGTACT 1 cut(s) 1256
SchI GAGTC 5 cut(s) 437, 474, 758, 1130, 1548
ScrFI CCNGG 3 cut(s) 194, 224, 1545
SduI GDGCHC 2 cut(s) 1182, 1346
SfaNI GCATC 4 cut(s) 1075, 1105, 1279, 1442
SfcI CTRYAG 1 cut(s) 536
SfuI TTCGAA 1 cut(s) 1056
SmlI CTYRAG 3 cut(s) 342, 473, 758
SmoI CTYRAG 3 cut(s) 342, 473, 758
SsiI CCGC 5 cut(s) 628, 1012, 1428, 1520, 1605
SstI GAGCTC 2 cut(s) 1182, 1346
StyD4I CCNGG 3 cut(s) 192, 222, 1543
TaaI ACNGT 5 cut(s) 495, 540, 907, 922, 1537
TaiI ACGT 3 cut(s) 58, 186, 1384
TaqI TCGA 4 cut(s) 108, 690, 1056, 1083
TaqII GACCGA 1 cut(s) 411
TatI WGTACW 3 cut(s) 861, 1254, 1470
TauI GCSGC 1 cut(s) 1430
TfiI GAWTC 9 cut(s) 8, 48, 570, 743, 808, 1216, 1306, 1530, 1548
Tru1I TTAA 7 cut(s) 156, 186, 216, 276, 638, 759, 836
Tru9I TTAA 7 cut(s) 156, 186, 216, 276, 638, 759, 836
TscAI CASTG 2 cut(s) 678, 1580
TseFI GTSAC 1 cut(s) 28
TseI GCWGC 8 cut(s) 86, 521, 578, 850, 992, 995, 1150, 1153
Tsp45I GTSAC 1 cut(s) 28
TspDTI ATGAA 7 cut(s) 65, 498, 735, 889, 977, 980, 1205
TspGWI ACGGA 1 cut(s) 1190
TspRI CASTG 2 cut(s) 678, 1580
Van91I CCANNNNNTGG 1 cut(s) 110
Vha464I CTTAAG 1 cut(s) 758
XapI RAATTY 7 cut(s) 137, 144, 167, 174, 257, 287, 354
XceI RCATGY 1 cut(s) 860
ZrmI AGTACT 1 cut(s) 1256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.