Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
795857 .. 798728
MD12G1007100.v1.1.491
Length: 171 bp
ATGTTGGATTGGTGGGAGCGTTGTCTCTTCAATACTTTGGTCATTGTGTTGCTGTGGTTCGTGTTTTTCAATGTGTCGCGATATTTAATGGAGTTTGGCAAGAGTGTCGTGCCAGGCATCTACGGTGAGTCATGGAGGAAGAATCGACCTGGACTGTTCACTTCCGGTTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
9.1
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| SPT_ssu-like |
PF11779 |
1 - 31 |
5.8e-10 |
Small subunit of serine palmitoyltransferase-like |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0015141)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AccII |
CGCG |
1 cut(s)
|
79 |
| AgsI |
TTSAA |
2 cut(s)
|
31, 70 |
| AjnI |
CCWGG |
2 cut(s)
|
112, 148 |
| Alw26I |
GTCTC |
1 cut(s)
|
29 |
| AsuHPI |
GGTGA |
1 cut(s)
|
137 |
| BcgI |
CGANNNNNNTGC |
2 cut(s)
|
88, 122 |
| BciT130I |
CCWGG |
2 cut(s)
|
114, 150 |
| BcoDI |
GTCTC |
1 cut(s)
|
29 |
| Bme1390I |
CCNGG |
2 cut(s)
|
114, 150 |
| BmrFI |
CCNGG |
2 cut(s)
|
114, 150 |
| BmsI |
GCATC |
1 cut(s)
|
126 |
| BsaWI |
WCCGGW |
1 cut(s)
|
164 |
| BseBI |
CCWGG |
2 cut(s)
|
114, 150 |
| Bsh1236I |
CGCG |
1 cut(s)
|
79 |
| BsiSI |
CCGG |
1 cut(s)
|
165 |
| BsmAI |
GTCTC |
1 cut(s)
|
29 |
| Bsp68I |
TCGCGA |
1 cut(s)
|
79 |
| BspFNI |
CGCG |
1 cut(s)
|
79 |
| Bst2UI |
CCWGG |
2 cut(s)
|
114, 150 |
| Bst4CI |
ACNGT |
2 cut(s)
|
125, 156 |
| Bst6I |
CTCTTC |
1 cut(s)
|
32 |
| BstFNI |
CGCG |
1 cut(s)
|
79 |
| BstMAI |
GTCTC |
1 cut(s)
|
29 |
| BstNI |
CCWGG |
2 cut(s)
|
114, 150 |
| BstSCI |
CCNGG |
2 cut(s)
|
112, 148 |
| BstUI |
CGCG |
1 cut(s)
|
79 |
| BtuMI |
TCGCGA |
1 cut(s)
|
79 |
| CviAII |
CATG |
1 cut(s)
|
132 |
| Eam1104I |
CTCTTC |
1 cut(s)
|
32 |
| EarI |
CTCTTC |
1 cut(s)
|
32 |
| EcoRII |
CCWGG |
2 cut(s)
|
112, 148 |
| FaeI |
CATG |
1 cut(s)
|
135 |
| FaiI |
YATR |
1 cut(s)
|
133 |
| FatI |
CATG |
1 cut(s)
|
131 |
| HapII |
CCGG |
1 cut(s)
|
165 |
| Hin1II |
CATG |
1 cut(s)
|
135 |
| HinfI |
GANTC |
2 cut(s)
|
128, 142 |
| HpaII |
CCGG |
1 cut(s)
|
165 |
| HphI |
GGTGA |
1 cut(s)
|
137 |
| Hpy166II |
GTNNAC |
1 cut(s)
|
159 |
| Hpy188III |
TCNNGA |
1 cut(s)
|
78 |
| Hpy8I |
GTNNAC |
1 cut(s)
|
159 |
| HpyCH4III |
ACNGT |
2 cut(s)
|
125, 156 |
| Hsp92II |
CATG |
1 cut(s)
|
135 |
| LmnI |
GCTCC |
1 cut(s)
|
16 |
| LpnPI |
CCDG |
4 cut(s)
|
99, 126, 135, 162 |
| LweI |
GCATC |
1 cut(s)
|
126 |
| MboII |
GAAGA |
2 cut(s)
|
19, 151 |
| MlyI |
GAGTC |
1 cut(s)
|
137 |
| MnlI |
CCTC |
1 cut(s)
|
129 |
| MseI |
TTAA |
1 cut(s)
|
86 |
| MspI |
CCGG |
1 cut(s)
|
165 |
| MspR9I |
CCNGG |
2 cut(s)
|
114, 150 |
| MvaI |
CCWGG |
2 cut(s)
|
114, 150 |
| MvnI |
CGCG |
1 cut(s)
|
79 |
| NlaIII |
CATG |
1 cut(s)
|
135 |
| NruI |
TCGCGA |
1 cut(s)
|
79 |
| PfeI |
GAWTC |
1 cut(s)
|
142 |
| PleI |
GAGTC |
1 cut(s)
|
136 |
| PpsI |
GAGTC |
1 cut(s)
|
136 |
| Psp6I |
CCWGG |
2 cut(s)
|
112, 148 |
| PspGI |
CCWGG |
2 cut(s)
|
112, 148 |
| RruI |
TCGCGA |
1 cut(s)
|
79 |
| SaqAI |
TTAA |
1 cut(s)
|
86 |
| SchI |
GAGTC |
1 cut(s)
|
137 |
| ScrFI |
CCNGG |
2 cut(s)
|
114, 150 |
| SetI |
ASST |
1 cut(s)
|
151 |
| SfaNI |
GCATC |
1 cut(s)
|
126 |
| SgeI |
CNNG |
9 cut(s)
|
73, 90, 112, 121, 125, 126, 144, 161, 162 |
| StyD4I |
CCNGG |
2 cut(s)
|
112, 148 |
| TaaI |
ACNGT |
2 cut(s)
|
125, 156 |
| TaqI |
TCGA |
1 cut(s)
|
145 |
| TfiI |
GAWTC |
1 cut(s)
|
142 |
| Tru1I |
TTAA |
1 cut(s)
|
86 |
| Tru9I |
TTAA |
1 cut(s)
|
86 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.