Rorug05G0404600

Small subunit of serine palmitoyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
55701370 .. 55711162
9793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0404600.1

Sequence Viewer

Length: 2460 bp
ATGGTTCTTCACCAAAGCCCTAGGAGAGCAGTCTTGCTCTCTCAAGACTCGGTCTTTGTCCAAAAAACCAAAAAAAACACTTCCCTTATGCTCTCACTCTCACACCCACTGCGTTCTTGCTCTACTTGTCTTCGCCTACACTCTACTCTCCGCTCTCTCCGTCACTCCTCTCTCTTCCCCTTTCCGATTTCCCCAAACCCTAATCGCGCCATGTCCTCCAATCGCCCCTCCGCCTTCGACGCGCTCATGTCCGGCGCACGCGCCGCCGCCGCCAAGAAAAAGCCCCAACCCTCTTCCTCCCCCAAGAAGCGCAAAACCCTAAACCCCAATTCCGCGCCTAAGGAAAATCCCCAATTGCTATCCAAACCCGAAGACGCTGCTCCGAGCCCGGCCCCGGAATCCAAACCAGAAACGGAGAAAGAAGATCAAGAACAGTCTGGAAATGGAGTTGAGCTGGCACCGACGGCGAAGAAAGTGTGCGCGGCGGCCGGAGTGGAGGAGCGGACGGCTCAATTGGCGAGTAGAATTGAGCTGTTGAAGAAGAAGGCCTTGGATTTTGACCCGAAGCTGATGGCGAATTGGGACAAGGGCGAAAGGGTTCCGTTTATGTTTCTTTCTTTGGTTTTCAATTTGATTTCCAAAGAGTCTGGGCGGATTGTGATTACGGATATAGTGTGTAATATGCTTAGGACTGTAATCTACACCACGCCGGAGGATTTGCTTCCGGTGGTTTATCTCTCGGCCAATAAGATTGCTCCGGCGCATGAGGGATTGGAGCTTGGCATTGGGGACTCTTCGATTATCAAGGCGCTTTCGCAGGCTTGTGGGAGGAGTGAAAAGGATGTTAAGAAGCGCTATGATGCAGAAGGAGACTTGGGTATTGTTGCACAGAAAAGCCGTTCATCCCAAACTATGATGCGCAAGCCTGAGCCATTGACTGTCAGCAAGGTTTTCAACACATTTCGCACCCTTGCTAAGGAATCTGGGAAGGATAGCCAGGAGAAGAAAAAGAACCATATGAAGGCACTTCTTGTTGCTGCCACTGACTGTGAACCTCTGTATTTGATCCGTTTGCTTCAGTCGAAGTTGCGAATTGGATTGGCAGAGCAAACTCTTTTGGCTGCACTGGGACAAGCTGCAGTCTATACTGAAGAACATTCTAAACCACCTCCTGAAATTCAGTCTCCTTTAGAAGAGGCTGCAAAGATTGTTAAACAAGTGTACTCTCTGCTTCCTGTTTACGATAAGATCATCCCTGCCCTTCTGAGTGGTGGTGTTTGGAATCTTCCAAAAACGTGTAGCTTTACTTTGGGTATCCCAGTTGGACCTATGCTTGCAAAGCCAAGTAAAGGGGTATCTGAGATTGTCCAAAAGTTTCAGGATACAGAATACACCTGTGAATACAAGTATGATGGAGAGCGTGCCCAGATACATTACATGGAGGATGGTACTGTTGAGATATACAGTCGAAATGCTGAACGAAACACCGGAAAGTTCCCTGATGTTGCGATTGCAGTGTCAAGGTTAAAGAAGTCGTCTGTAAAATCATTTGTTTTAGATTGTGAATTGGTTGCCTATGACCGTGCAAATAACAAAATTCTGCCCTTCCAGGTACTTAGCACCCGAGCTCGTAAAAATGTGAGCATGAGCGATATTAAGATTGAGGTCTGCATATTTGCTTTTGATATGTTGTTTCTTAATGGTCGACCACTTACTCAAGAACAGCTCAAAGTTCGCAGAGAGTATCTTTATGACTCTTTTGAGGAAGAAGCTGGAATTTTTCAGTTTGCCACAGCAATAACCTCAAAGGATATTGATGAAATACAAACGTTTCTTGATGCCGCCGTTAATTCAAGTTCTGAGGGTTTAATAATCAAAACATTAAGCAAAGATGCTACATACGAGCCTTCGAAGCGGTCACTTAACTGGCTGAAATTGAAGAAAGATTACATGGATAGTTTCGGGGACTCACTGGACTTGGTACCTATTGCTGCTTTCCATGGCCGGGGAAAACGTACAGGTGTCTATGGTGCTTTTCTCCTTGCTTGCTACGATAGCAATAATGAAGAGTTTCAAAGCATATGTAAAATAGGCACTGGATTTTCTGAAGCAGTGCTTGAAGAGCGTTCTGCCAGCCTGCGCGAAACAGTGATACCTAAACCTAAGACATACTATAGCTATGCAGAAACAAGTAATGCAAATACTCCAGATGTATGGTTTGAACCCACTCAGGTTTGGGAGGTGAAAGCTGCTGACTTGACTATTAGTCCTGTGTATCGTGCTGCAGTAGGCATAGTGGATTCTAATAAGGGTATTTCTCTTCGATTTCCACGTCTTGTTCGTGTTAGGGAAGATAAAAAACCAGAGGAAGCTTCATCATCTGAGCAGGTTGCTGATATGTATTCTGCTCAATCCAACAAAAGTTCTAACCACCAAGATGACAAGGAAGATGAAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

819

Amino Acids

90.93

Weight (kDa)

8.67

Isoelectric Point (pI)

54.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_ligase_A_N PF04675 201 - 376 3.7e-51 DNA ligase N terminus
DNA_ligase_A_M PF01068 443 - 647 2.7e-65 ATP dependent DNA ligase domain
DNA_ligase_A_C PF04679 672 - 786 1.6e-22 ATP dependent DNA ligase C terminal region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015141)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 920
Acc36I ACCTGC 1 cut(s) 2377
Acc65I GGTACC 1 cut(s) 1981
AccB1I GGYRCC 2 cut(s) 457, 1981
AccBSI CCGCTC 2 cut(s) 153, 502
AccI GTMKAC 1 cut(s) 1705
AccII CGCG 6 cut(s) 207, 242, 261, 335, 482, 2142
AclI AACGTT 1 cut(s) 1829
AclWI GGATC 1 cut(s) 1060
AcoI YGGCCR 3 cut(s) 486, 741, 2002
AcsI RAATTY 3 cut(s) 1176, 1596, 1776
AcuI CTGAAG 3 cut(s) 1061, 1170, 2127
AfaI GTAC 5 cut(s) 1223, 1450, 1614, 1983, 2017
AfeI AGCGCT 1 cut(s) 854
AfiI CCNNNNNNNGG 5 cut(s) 394, 976, 1021, 1349, 2005
AflIII ACRYGT 1 cut(s) 1295
AgsI TTSAA 8 cut(s) 538, 628, 955, 1854, 1939, 2075, 2120, 2222
AhdI GACNNNNNGTC 1 cut(s) 2265
AjiI CACGTC 1 cut(s) 2333
AjnI CCWGG 2 cut(s) 996, 1608
AjuI GAANNNNNNNTTGG 2 cut(s) 533, 565
Alw21I GWGCWC 1 cut(s) 1630
Alw26I GTCTC 2 cut(s) 864, 1188
AlwI GGATC 1 cut(s) 1060
Ama87I CYCGRG 1 cut(s) 1623
Aor51HI AGCGCT 1 cut(s) 854
AoxI GGCC 5 cut(s) 390, 486, 546, 741, 2002
ApeKI GCWGC 8 cut(s) 377, 1037, 1121, 1136, 1199, 1991, 2249, 2282
ApoI RAATTY 3 cut(s) 1176, 1596, 1776
ArsI GACNNNNNNTTYG 2 cut(s) 38, 70
Asp700I GAANNNNTTC 2 cut(s) 597, 2070
Asp718I GGTACC 1 cut(s) 1981
AspA2I CCTAGG 1 cut(s) 20
AspS9I GGNCC 2 cut(s) 391, 1325
AsuC2I CCSGG 3 cut(s) 389, 395, 2006
AsuHPI GGTGA 1 cut(s) 2254
AsuII TTCGAA 1 cut(s) 1910
AvaI CYCGRG 1 cut(s) 1623
AvaII GGWCC 1 cut(s) 1325
AvrII CCTAGG 1 cut(s) 20
AxyI CCTNAGG 1 cut(s) 339
BaeGI GKGCMC 1 cut(s) 1426
BanI GGYRCC 2 cut(s) 457, 1981
BanII GRGCYC 2 cut(s) 389, 1630
BarI GAAGNNNNNNTAC 2 cut(s) 1931, 1963
BbsI GAAGAC 2 cut(s) 122, 378
Bbv12I GWGCWC 1 cut(s) 1630
BbvI GCAGC 8 cut(s) 364, 1024, 1108, 1123, 1186, 1978, 2236, 2269
BccI CCATC 3 cut(s) 565, 1406, 1439
BceAI ACGGC 4 cut(s) 480, 522, 882, 1829
BcgI CGANNNNNNTGC 2 cut(s) 359, 393
BciT130I CCWGG 2 cut(s) 998, 1610
BciVI GTATCC 2 cut(s) 1325, 1375
BcnI CCSGG 3 cut(s) 389, 395, 2006
BcoDI GTCTC 2 cut(s) 864, 1188
BfaI CTAG 2 cut(s) 21, 2458
BfmI CTRYAG 3 cut(s) 1137, 2173, 2283
BfoI RGCGCY 2 cut(s) 812, 856
BfuAI ACCTGC 1 cut(s) 2377
BfuI GTATCC 2 cut(s) 1325, 1375
BlnI CCTAGG 1 cut(s) 20
Bme1390I CCNGG 5 cut(s) 389, 395, 998, 1610, 2006
Bme18I GGWCC 1 cut(s) 1325
BmeRI GACNNNNNGTC 1 cut(s) 2265
BmeT110I CYCGRG 1 cut(s) 1623
BmgBI CACGTC 1 cut(s) 2333
BmgT120I GGNCC 2 cut(s) 391, 1325
BmiI GGNNCC 4 cut(s) 393, 459, 600, 1983
BmrFI CCNGG 5 cut(s) 389, 395, 998, 1610, 2006
BmrI ACTGGG 2 cut(s) 1136, 1313
BmsI GCATC 4 cut(s) 850, 906, 1828, 1882
BmuI ACTGGG 2 cut(s) 1136, 1313
BpiI GAAGAC 2 cut(s) 122, 378
BpmI CTGGAG 1 cut(s) 2190
Bpu10I CCTNAGC 3 cut(s) 686, 927, 975
Bpu14I TTCGAA 1 cut(s) 1910
BpuEI CTTGAG 2 cut(s) 27, 1701
BpuMI CCSGG 3 cut(s) 389, 395, 2006
BsaJI CCNNGG 5 cut(s) 20, 393, 549, 1999, 2005
BsaWI WCCGGW 2 cut(s) 724, 1487
Bsc4I CCNNNNNNNGG 5 cut(s) 394, 976, 1021, 1349, 2005
Bse1I ACTGG 5 cut(s) 1131, 1319, 1931, 1977, 2101
Bse21I CCTNAGG 1 cut(s) 339
BseBI CCWGG 2 cut(s) 998, 1610
BseDI CCNNGG 5 cut(s) 20, 393, 549, 1999, 2005
BseGI GGATG 4 cut(s) 847, 902, 1251, 1450
BseLI CCNNNNNNNGG 5 cut(s) 394, 976, 1021, 1349, 2005
BseMII CTCAG 6 cut(s) 918, 1256, 1350, 1851, 2243, 2373
BseNI ACTGG 5 cut(s) 1131, 1319, 1931, 1977, 2101
BseRI GAGGAG 3 cut(s) 157, 512, 844
BseSI GKGCMC 1 cut(s) 1426
BseX3I CGGCCG 1 cut(s) 486
BseXI GCAGC 8 cut(s) 364, 1024, 1108, 1123, 1186, 1978, 2236, 2269
BsgI GTGCAG 1 cut(s) 1107
Bsh1236I CGCG 6 cut(s) 207, 242, 261, 335, 482, 2142
Bsh1285I CGRYCG 1 cut(s) 489
BshFI GGCC 5 cut(s) 392, 488, 548, 743, 2004
BshNI GGYRCC 2 cut(s) 457, 1981
BsiEI CGRYCG 1 cut(s) 489
BsiHKAI GWGCWC 1 cut(s) 1630
BsiHKCI CYCGRG 1 cut(s) 1623
BsiSI CCGG 9 cut(s) 252, 389, 395, 489, 710, 725, 758, 1488, 2005
BslFI GGGAC 4 cut(s) 596, 803, 1143, 1979
BslI CCNNNNNNNGG 5 cut(s) 394, 976, 1021, 1349, 2005
BsmAI GTCTC 2 cut(s) 864, 1188
BsmFI GGGAC 4 cut(s) 596, 803, 1143, 1979
BsnI GGCC 5 cut(s) 392, 488, 548, 743, 2004
BsoBI CYCGRG 1 cut(s) 1623
Bsp119I TTCGAA 1 cut(s) 1910
Bsp1286I GDGCHC 3 cut(s) 389, 1426, 1630
Bsp143I GATC 3 cut(s) 424, 1065, 1248
Bsp19I CCATGG 1 cut(s) 1999
BspANI GGCC 5 cut(s) 392, 488, 548, 743, 2004
BspCNI CTCAG 6 cut(s) 919, 1257, 1351, 1852, 2242, 2374
BspFNI CGCG 6 cut(s) 207, 242, 261, 335, 482, 2142
BspLI GGNNCC 4 cut(s) 393, 459, 600, 1983
BspMAI CTGCAG 2 cut(s) 1141, 2287
BspMI ACCTGC 1 cut(s) 2377
BspPI GGATC 1 cut(s) 1060
BspQI GCTCTTC 1 cut(s) 2115
BspT104I TTCGAA 1 cut(s) 1910
BspT107I GGYRCC 2 cut(s) 457, 1981
BsrBI CCGCTC 2 cut(s) 153, 502
BsrI ACTGG 5 cut(s) 1131, 1319, 1931, 1977, 2101
BssECI CCNNGG 5 cut(s) 20, 393, 549, 1999, 2005
BssMI GATC 3 cut(s) 424, 1065, 1248
BssT1I CCWWGG 3 cut(s) 20, 549, 1999
Bst2UI CCWGG 2 cut(s) 998, 1610
Bst4CI ACNGT 8 cut(s) 435, 694, 940, 1049, 1453, 1466, 1583, 2149
Bst6I CTCTTC 7 cut(s) 179, 298, 799, 1188, 2061, 2115, 2325
BstBI TTCGAA 1 cut(s) 1910
BstC8I GCNNGC 9 cut(s) 259, 456, 819, 923, 1335, 1422, 2047, 2134, 2138
BstDSI CCRYGG 1 cut(s) 1999
BstENI CCTNNNNNAGG 1 cut(s) 974
BstF5I GGATG 4 cut(s) 847, 902, 1251, 1450
BstFNI CGCG 6 cut(s) 207, 242, 261, 335, 482, 2142
BstH2I RGCGCY 2 cut(s) 812, 856
BstKTI GATC 3 cut(s) 427, 1068, 1251
BstMAI GTCTC 2 cut(s) 864, 1188
BstMBI GATC 3 cut(s) 424, 1065, 1248
BstMCI CGRYCG 1 cut(s) 489
BstMWI GCNNNNNNNGC 9 cut(s) 239, 263, 269, 464, 515, 1339, 1912, 2055, 2122
BstNI CCWGG 2 cut(s) 998, 1610
BstSCI CCNGG 5 cut(s) 387, 393, 996, 1608, 2004
BstSFI CTRYAG 3 cut(s) 1137, 2173, 2283
BstSLI GKGCMC 1 cut(s) 1426
BstUI CGCG 6 cut(s) 207, 242, 261, 335, 482, 2142
BstV1I GCAGC 8 cut(s) 364, 1024, 1108, 1123, 1186, 1978, 2236, 2269
BstV2I GAAGAC 2 cut(s) 122, 378
BstXI CCANNNNNNTGG 1 cut(s) 2214
BstZI CGGCCG 1 cut(s) 486
Bsu36I CCTNAGG 1 cut(s) 339
BsuI GTATCC 2 cut(s) 1325, 1375
BsuRI GGCC 5 cut(s) 392, 488, 548, 743, 2004
BtgI CCRYGG 1 cut(s) 1999
BtrI CACGTC 1 cut(s) 2333
BtsCI GGATG 4 cut(s) 847, 902, 1251, 1450
BtsI GCAGTG 3 cut(s) 107, 1521, 2118
BtsIMutI CAGTG 8 cut(s) 107, 1041, 1124, 1521, 1970, 2094, 2118, 2154
BveI ACCTGC 1 cut(s) 2377
Cac8I GCNNGC 9 cut(s) 259, 456, 819, 923, 1335, 1422, 2047, 2134, 2138
Cfr13I GGNCC 2 cut(s) 391, 1325
CseI GACGC 2 cut(s) 248, 383
Csp6I GTAC 5 cut(s) 1222, 1449, 1613, 1982, 2016
CviAII CATG 7 cut(s) 211, 247, 764, 1438, 1645, 1951, 2000
CviQI GTAC 5 cut(s) 1222, 1449, 1613, 1982, 2016
DpnI GATC 3 cut(s) 426, 1067, 1250
DpnII GATC 3 cut(s) 424, 1065, 1248
DriI GACNNNNNGTC 1 cut(s) 2265
EaeI YGGCCR 3 cut(s) 486, 741, 2002
EagI CGGCCG 1 cut(s) 486
Eam1104I CTCTTC 7 cut(s) 179, 298, 799, 1188, 2061, 2115, 2325
Eam1105I GACNNNNNGTC 1 cut(s) 2265
EarI CTCTTC 7 cut(s) 179, 298, 799, 1188, 2061, 2115, 2325
EciI GGCGGA 2 cut(s) 220, 667
Ecl136II GAGCTC 1 cut(s) 1628
EclXI CGGCCG 1 cut(s) 486
Eco130I CCWWGG 3 cut(s) 20, 549, 1999
Eco147I AGGCCT 1 cut(s) 548
Eco24I GRGCYC 2 cut(s) 389, 1630
Eco47I GGWCC 1 cut(s) 1325
Eco47III AGCGCT 1 cut(s) 854
Eco52I CGGCCG 1 cut(s) 486
Eco53kI GAGCTC 1 cut(s) 1628
Eco57I CTGAAG 3 cut(s) 1061, 1170, 2127
Eco81I CCTNAGG 1 cut(s) 339
Eco88I CYCGRG 1 cut(s) 1623
EcoICRI GAGCTC 1 cut(s) 1628
EcoNI CCTNNNNNAGG 1 cut(s) 974
EcoRII CCWGG 2 cut(s) 996, 1608
EcoT14I CCWWGG 3 cut(s) 20, 549, 1999
EcoT38I GRGCYC 2 cut(s) 389, 1630
ErhI CCWWGG 3 cut(s) 20, 549, 1999
FaeI CATG 7 cut(s) 214, 250, 767, 1441, 1648, 1954, 2003
FalI AAGNNNNNCTT 4 cut(s) 533, 565, 2100, 2132
FaqI GGGAC 4 cut(s) 596, 803, 1143, 1979
FatI CATG 7 cut(s) 210, 246, 763, 1437, 1644, 1950, 1999
FauNDI CATATG 2 cut(s) 1017, 2081
FblI GTMKAC 1 cut(s) 1705
FokI GGATG 4 cut(s) 854, 889, 1238, 1457
FriOI GRGCYC 2 cut(s) 389, 1630
FspBI CTAG 2 cut(s) 21, 2458
FspI TGCGCA 1 cut(s) 920
GsuI CTGGAG 1 cut(s) 2190
HaeII RGCGCY 2 cut(s) 812, 856
HaeIII GGCC 5 cut(s) 392, 488, 548, 743, 2004
HapII CCGG 9 cut(s) 252, 389, 395, 489, 710, 725, 758, 1488, 2005
HgaI GACGC 2 cut(s) 248, 383
Hin1II CATG 7 cut(s) 214, 250, 767, 1441, 1648, 1954, 2003
HincII GTYRAC 1 cut(s) 1706
HindII GTYRAC 1 cut(s) 1706
HindIII AAGCTT 1 cut(s) 2370
HinfI GANTC 9 cut(s) 47, 398, 644, 791, 980, 1282, 1754, 1967, 2300
HpaII CCGG 9 cut(s) 252, 389, 395, 489, 710, 725, 758, 1488, 2005
HphI GGTGA 1 cut(s) 2254
Hpy166II GTNNAC 4 cut(s) 1052, 1222, 1240, 1706
Hpy188I TCNGA 7 cut(s) 186, 384, 1266, 1360, 1861, 2107, 2383
Hpy188III TCNNGA 8 cut(s) 44, 428, 438, 1172, 1379, 1718, 1835, 2207
Hpy8I GTNNAC 4 cut(s) 1052, 1222, 1240, 1706
Hpy99I CGWCG 2 cut(s) 242, 466
HpyAV CCTTC 8 cut(s) 244, 538, 860, 982, 1015, 1271, 1615, 1917
HpyCH4III ACNGT 8 cut(s) 435, 694, 940, 1049, 1453, 1466, 1583, 2149
HpyCH4IV ACGT 4 cut(s) 1295, 1829, 2014, 2332
HpyF10VI GCNNNNNNNGC 9 cut(s) 239, 263, 269, 464, 515, 1339, 1912, 2055, 2122
HpySE526I ACGT 4 cut(s) 1295, 1829, 2014, 2332
Hsp92II CATG 7 cut(s) 214, 250, 767, 1441, 1648, 1954, 2003
KpnI GGTACC 1 cut(s) 1985
Kzo9I GATC 3 cut(s) 424, 1065, 1248
LguI GCTCTTC 1 cut(s) 2115
LmnI GCTCC 4 cut(s) 385, 499, 760, 775
Lsp1109I GCAGC 8 cut(s) 364, 1024, 1108, 1123, 1186, 1978, 2236, 2269
LweI GCATC 4 cut(s) 850, 906, 1828, 1882
MaeI CTAG 2 cut(s) 21, 2458
MaeII ACGT 4 cut(s) 1295, 1829, 2014, 2332
MaeIII GTNAC 2 cut(s) 161, 1917
MalI GATC 3 cut(s) 426, 1067, 1250
MbiI CCGCTC 2 cut(s) 153, 502
MboI GATC 3 cut(s) 424, 1065, 1248
MfeI CAATTG 2 cut(s) 353, 512
MhlI GDGCHC 3 cut(s) 389, 1426, 1630
MlyI GAGTC 5 cut(s) 41, 653, 785, 1748, 1961
MmeI TCCRAC 2 cut(s) 1303, 2439
MroXI GAANNNNTTC 2 cut(s) 597, 2070
MseI TTAA 9 cut(s) 846, 1212, 1526, 1656, 1698, 1848, 1868, 1883, 1923
MslI CAYNNNNRTG 1 cut(s) 2436
MspI CCGG 9 cut(s) 252, 389, 395, 489, 710, 725, 758, 1488, 2005
MspR9I CCNGG 5 cut(s) 389, 395, 998, 1610, 2006
MunI CAATTG 2 cut(s) 353, 512
MvaI CCWGG 2 cut(s) 998, 1610
MvnI CGCG 6 cut(s) 207, 242, 261, 335, 482, 2142
MwoI GCNNNNNNNGC 9 cut(s) 239, 263, 269, 464, 515, 1339, 1912, 2055, 2122
NciI CCSGG 3 cut(s) 389, 395, 2006
NcoI CCATGG 1 cut(s) 1999
NdeI CATATG 2 cut(s) 1017, 2081
NdeII GATC 3 cut(s) 424, 1065, 1248
NlaIII CATG 7 cut(s) 214, 250, 767, 1441, 1648, 1954, 2003
NlaIV GGNNCC 4 cut(s) 393, 459, 600, 1983
NmeAIII GCCGAG 1 cut(s) 719
NmuCI GTSAC 2 cut(s) 161, 1917
NsbI TGCGCA 1 cut(s) 920
NspV TTCGAA 1 cut(s) 1910
PceI AGGCCT 1 cut(s) 548
PciSI GCTCTTC 1 cut(s) 2115
PcsI WCGNNNNNNNCGW 2 cut(s) 2329, 2338
PdmI GAANNNNTTC 2 cut(s) 597, 2070
PfeI GAWTC 4 cut(s) 398, 980, 1282, 2300
PflFI GACNNNGTC 1 cut(s) 50
PleI GAGTC 5 cut(s) 41, 652, 785, 1748, 1961
PpsI GAGTC 5 cut(s) 41, 652, 785, 1748, 1961
Psp124BI GAGCTC 1 cut(s) 1630
Psp1406I AACGTT 1 cut(s) 1829
Psp6I CCWGG 2 cut(s) 996, 1608
PspGI CCWGG 2 cut(s) 996, 1608
PspN4I GGNNCC 4 cut(s) 393, 459, 600, 1983
PspPI GGNCC 2 cut(s) 391, 1325
PstI CTGCAG 2 cut(s) 1141, 2287
PsyI GACNNNGTC 1 cut(s) 50
RsaI GTAC 5 cut(s) 1223, 1450, 1614, 1983, 2017
RsaNI GTAC 5 cut(s) 1222, 1449, 1613, 1982, 2016
RseI CAYNNNNRTG 1 cut(s) 2436
SacI GAGCTC 1 cut(s) 1630
SalI GTCGAC 1 cut(s) 1704
SapI GCTCTTC 1 cut(s) 2115
SaqAI TTAA 9 cut(s) 846, 1212, 1526, 1656, 1698, 1848, 1868, 1883, 1923
Sau3AI GATC 3 cut(s) 424, 1065, 1248
Sau96I GGNCC 2 cut(s) 391, 1325
SchI GAGTC 5 cut(s) 41, 653, 785, 1748, 1961
ScrFI CCNGG 5 cut(s) 389, 395, 998, 1610, 2006
SduI GDGCHC 3 cut(s) 389, 1426, 1630
SfaNI GCATC 4 cut(s) 850, 906, 1828, 1882
SfcI CTRYAG 3 cut(s) 1137, 2173, 2283
SfuI TTCGAA 1 cut(s) 1910
SinI GGWCC 1 cut(s) 1325
SmiMI CAYNNNNRTG 1 cut(s) 2436
SmlI CTYRAG 2 cut(s) 42, 1716
SmoI CTYRAG 2 cut(s) 42, 1716
SseBI AGGCCT 1 cut(s) 548
SspMI CTAG 2 cut(s) 21, 2458
SstI GAGCTC 1 cut(s) 1630
StuI AGGCCT 1 cut(s) 548
StyD4I CCNGG 5 cut(s) 387, 393, 996, 1608, 2004
StyI CCWWGG 3 cut(s) 20, 549, 1999
TaaI ACNGT 8 cut(s) 435, 694, 940, 1049, 1453, 1466, 1583, 2149
TaiI ACGT 4 cut(s) 1298, 1832, 2017, 2335
TaqI TCGA 7 cut(s) 237, 797, 1082, 1468, 1705, 1910, 2323
TaqII GACCGA 1 cut(s) 40
TatI WGTACW 1 cut(s) 1221
TauI GCSGC 6 cut(s) 266, 269, 272, 485, 488, 1844
TfiI GAWTC 4 cut(s) 398, 980, 1282, 2300
Tru1I TTAA 9 cut(s) 846, 1212, 1526, 1656, 1698, 1848, 1868, 1883, 1923
Tru9I TTAA 9 cut(s) 846, 1212, 1526, 1656, 1698, 1848, 1868, 1883, 1923
TscAI CASTG 8 cut(s) 114, 1048, 1131, 1521, 1977, 2101, 2118, 2154
TseFI GTSAC 2 cut(s) 161, 1917
TseI GCWGC 8 cut(s) 377, 1037, 1121, 1136, 1199, 1991, 2249, 2282
Tsp45I GTSAC 2 cut(s) 161, 1917
TspDTI ATGAA 5 cut(s) 891, 1034, 1833, 2079, 2364
TspGWI ACGGA 5 cut(s) 149, 428, 591, 680, 1058
TspRI CASTG 8 cut(s) 114, 1048, 1131, 1521, 1977, 2101, 2118, 2154
Tth111I GACNNNGTC 1 cut(s) 50
VpaK11BI GGWCC 1 cut(s) 1325
XagI CCTNNNNNAGG 1 cut(s) 974
XapI RAATTY 3 cut(s) 1176, 1596, 1776
XmaJI CCTAGG 1 cut(s) 20
XmiI GTMKAC 1 cut(s) 1705
XmnI GAANNNNTTC 2 cut(s) 597, 2070
XspI CTAG 2 cut(s) 21, 2458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.