MD12G1021900.v1.1

Monodehydroascorbate

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
2184341 .. 2187854
3514 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1021900.v1.1.491

Sequence Viewer

Length: 1305 bp
ATGGCGGCGAAGAACTTCAAGTACGTCATCCTCGGCGGCGGAGTCTCGGCTGGTTATGCAGCTCGGGAGTTTGCCAAGCAGGGGCTTAAGCCAGGCGAACTAGCAGTCATTTCCAAAGAGGCGGTGGCTCCCTACGAACGTCCTGCACTCAGCAAGGCTTATCTCTTACCCGAGTCTCCTGCTAGACTTCCTGGGTTTCATGTCTGCGTTGGAAGTGGAGGAGAGAGATTGCTTCCTGACTGGTACAAGGAGAAAGGGATAGAATTGATTCTTAGCACTGAAATAGTTAAAGCAGATCTTCCTGGGAAGACTCTTGTCAGTGGAACTGGGGAATCCTTCAAGTATGAGACTCTCGTTATTGCCACCGGCTCAACGGTTATAAGATTGTCAGATTTTGGTGTCAAAGGAGCTGATGCCAAAAACATCTTCTATTTGAGAGAAATTGATGATGCCGATAAACTCAATGAAGCAATTAAAGCAAAAAAGAATGGGAAGGCTGTGATTGTTGGAGGAGGGTACATTGGTCTCGAGCTTGGTGCAGCTTTGAGAATTAACAATTTAGATGTTAAAATGGTTTACCCTGAACCATGGTGCATGCCTCGGCTTTTCACTTCTGATATTGCTGCTTTTTATGAGGGCTATTATAAAAACAAAGGAGTTCAAATCATTAAGGGAACAGTTGCGACTGGATTTACTGCTGACTCCAATGGAGAGGTTAAGGAAGTGCACCTAAAGGATGGCACCGTGCTTGAAGCTGACATCGTTGTTGTTGGTGTTGGGGGCAGGCCCCTGACAACATTGTTCAAGGGACAAGTCGAAGAGGAGAAAGGCGGCATTAAGACTGATGCATTCTTCAAAACAAGTGTTCCGAATGTGTATGCTGTGGGTGATGTCGCCACTTTTCCTTTGAAGTTGTACAATGAGATTAGGAGAGTTGAGCATGTCGACCATGCACGCAAATCTGCTGAGCAGGCTGTAAAGGCCATCAAGGCAAGCGAGGAGGGGAAGACAGTTGAGGAGTATGACTACCTTCCATTCTTCTATTCCCGCTCCTTCGATCTTTCATGGCAATTCTACGGTGACAATGTTGGTGAAACTGTGCTCTTCGGAGACAGTAATCCTGCCACACCAAAGGCGAAGTTTGGATCATACTGGATTAAAGACGGGAAGGTGGTCGGCGCATTTCTGGAGGGCGGCACTCCGGAGGAGAACAAGGCTATTGCCAAAGTTGCAAAGGCCCAACCTCCTGTTGCCAGTTTAGATCAGCTTGCTACGGAAGGTCTCTCTTTCGCTAGTAAGATTTAA

Protein Analysis

435

Amino Acids

46.9

Weight (kDa)

6.51

Isoelectric Point (pI)

30.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 6 - 322 3.2e-61 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 165 - 247 2.6e-14 Pyridine nucleotide-disulphide oxidoreductase
MDHAR3-like_C PF21791 344 - 431 1.1e-42 Monodehydroascorbate reductase 3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 380, 645
AccB1I GGYRCC 1 cut(s) 740
AccBSI CCGCTC 1 cut(s) 1050
AccI GTMKAC 1 cut(s) 945
AccIII TCCGGA 1 cut(s) 1201
AciI CCGC 7 cut(s) 5, 36, 39, 122, 831, 1048, 1194
AclWI GGATC 1 cut(s) 1153
AfaI GTAC 4 cut(s) 23, 245, 518, 917
AfiI CCNNNNNNNGG 1 cut(s) 81
AflII CTTAAG 1 cut(s) 86
AgsI TTSAA 7 cut(s) 19, 340, 662, 752, 805, 856, 910
AjnI CCWGG 3 cut(s) 91, 190, 301
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AluBI AGCT 6 cut(s) 62, 410, 532, 542, 755, 1267
AluI AGCT 6 cut(s) 62, 410, 532, 542, 755, 1267
Alw21I GWGCWC 2 cut(s) 729, 1104
Alw26I GTCTC 6 cut(s) 49, 180, 341, 530, 1104, 1286
Alw44I GTGCAC 1 cut(s) 725
AlwI GGATC 1 cut(s) 1153
Ama87I CYCGRG 3 cut(s) 63, 170, 527
Aor13HI TCCGGA 1 cut(s) 1201
AoxI GGCC 3 cut(s) 785, 981, 1236
ApaLI GTGCAC 1 cut(s) 725
ApeKI GCWGC 3 cut(s) 59, 539, 623
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
Asp700I GAANNNNTTC 2 cut(s) 14, 267
AspLEI GCGC 1 cut(s) 1181
AspS9I GGNCC 2 cut(s) 786, 1237
AsuHPI GGTGA 3 cut(s) 899, 1091, 1103
AvaI CYCGRG 3 cut(s) 63, 170, 527
BaeGI GKGCMC 1 cut(s) 729
BaeI ACNNNNGTAYC 2 cut(s) 508, 541
BanI GGYRCC 1 cut(s) 740
BbsI GAAGAC 2 cut(s) 314, 1013
Bbv12I GWGCWC 2 cut(s) 729, 1104
BbvI GCAGC 3 cut(s) 71, 551, 610
BccI CCATC 2 cut(s) 731, 992
BcgI CGANNNNNNTGC 6 cut(s) 125, 159, 161, 195, 518, 552
BciT130I CCWGG 3 cut(s) 93, 192, 303
BcoDI GTCTC 6 cut(s) 49, 180, 341, 530, 1104, 1286
BfaI CTAG 3 cut(s) 101, 183, 1293
BfrI CTTAAG 1 cut(s) 86
BglI GCCNNNNNGGC 1 cut(s) 989
BglII AGATCT 1 cut(s) 295
BisI GCNGC 7 cut(s) 6, 37, 60, 540, 624, 832, 1195
BlpI GCTNAGC 1 cut(s) 966
BlsI GCNGC 7 cut(s) 7, 38, 61, 541, 625, 833, 1196
Bme1390I CCNGG 3 cut(s) 93, 192, 303
BmeT110I CYCGRG 3 cut(s) 63, 170, 527
BmgT120I GGNCC 2 cut(s) 786, 1237
BmiI GGNNCC 3 cut(s) 129, 742, 788
BmrFI CCNGG 3 cut(s) 93, 192, 303
BmrI ACTGGG 1 cut(s) 336
BmsI GCATC 3 cut(s) 403, 439, 835
BmuI ACTGGG 1 cut(s) 336
BoxI GACNNNNGTC 1 cut(s) 314
BpiI GAAGAC 2 cut(s) 314, 1013
BpmI CTGGAG 1 cut(s) 1208
Bpu1102I GCTNAGC 1 cut(s) 966
BsaI GGTCTC 2 cut(s) 530, 1286
BsaJI CCNNGG 5 cut(s) 31, 191, 302, 587, 599
BsaWI WCCGGW 1 cut(s) 1201
Bsc4I CCNNNNNNNGG 1 cut(s) 81
Bse118I RCCGGY 1 cut(s) 365
Bse1I ACTGG 5 cut(s) 245, 331, 691, 1157, 1254
BseAI TCCGGA 1 cut(s) 1201
BseBI CCWGG 3 cut(s) 93, 192, 303
BseDI CCNNGG 5 cut(s) 31, 191, 302, 587, 599
BseGI GGATG 2 cut(s) 27, 742
BseLI CCNNNNNNNGG 1 cut(s) 81
BseMII CTCAG 2 cut(s) 163, 957
BseNI ACTGG 5 cut(s) 245, 331, 691, 1157, 1254
BseRI GAGGAG 6 cut(s) 234, 525, 836, 1013, 1031, 1220
BseSI GKGCMC 1 cut(s) 729
BseXI GCAGC 3 cut(s) 71, 551, 610
BsgI GTGCAG 2 cut(s) 129, 558
BshFI GGCC 3 cut(s) 787, 983, 1238
BshNI GGYRCC 1 cut(s) 740
BsiHKAI GWGCWC 2 cut(s) 729, 1104
BsiHKCI CYCGRG 3 cut(s) 63, 170, 527
BsiSI CCGG 2 cut(s) 366, 1202
BslFI GGGAC 1 cut(s) 822
BslI CCNNNNNNNGG 1 cut(s) 81
BsmAI GTCTC 6 cut(s) 49, 180, 341, 530, 1104, 1286
BsmFI GGGAC 1 cut(s) 822
BsmI GAATGC 1 cut(s) 848
BsnI GGCC 3 cut(s) 787, 983, 1238
Bso31I GGTCTC 2 cut(s) 530, 1286
BsoBI CYCGRG 3 cut(s) 63, 170, 527
Bsp1286I GDGCHC 2 cut(s) 729, 1104
Bsp13I TCCGGA 1 cut(s) 1201
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 4 cut(s) 295, 1057, 1145, 1261
Bsp1720I GCTNAGC 1 cut(s) 966
Bsp19I CCATGG 1 cut(s) 587
BspACI CCGC 7 cut(s) 5, 36, 39, 122, 831, 1048, 1194
BspANI GGCC 3 cut(s) 787, 983, 1238
BspCNI CTCAG 2 cut(s) 162, 958
BspEI TCCGGA 1 cut(s) 1201
BspLI GGNNCC 3 cut(s) 129, 742, 788
BspPI GGATC 1 cut(s) 1153
BspQI GCTCTTC 1 cut(s) 1109
BspT107I GGYRCC 1 cut(s) 740
BspTI CTTAAG 1 cut(s) 86
BspTNI GGTCTC 2 cut(s) 530, 1286
BsrBI CCGCTC 1 cut(s) 1050
BsrFI RCCGGY 1 cut(s) 365
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 5 cut(s) 245, 331, 691, 1157, 1254
BssAI RCCGGY 1 cut(s) 365
BssECI CCNNGG 5 cut(s) 31, 191, 302, 587, 599
BssMI GATC 4 cut(s) 295, 1057, 1145, 1261
BssT1I CCWWGG 1 cut(s) 587
Bst2UI CCWGG 3 cut(s) 93, 192, 303
Bst4CI ACNGT 7 cut(s) 376, 679, 745, 1012, 1079, 1099, 1115
Bst6I CTCTTC 2 cut(s) 813, 1109
BstAFI CTTAAG 1 cut(s) 86
BstAUI TGTACA 1 cut(s) 915
BstC8I GCNNGC 6 cut(s) 596, 785, 955, 972, 994, 1269
BstDEI CTNAG 3 cut(s) 149, 272, 966
BstDSI CCRYGG 1 cut(s) 587
BstF5I GGATG 2 cut(s) 27, 742
BstHHI GCGC 1 cut(s) 1181
BstKTI GATC 4 cut(s) 298, 1060, 1148, 1264
BstMAI GTCTC 6 cut(s) 49, 180, 341, 530, 1104, 1286
BstMBI GATC 4 cut(s) 295, 1057, 1145, 1261
BstMWI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
BstNI CCWGG 3 cut(s) 93, 192, 303
BstNSI RCATGY 2 cut(s) 598, 944
BstPAI GACNNNNGTC 1 cut(s) 314
BstSCI CCNGG 3 cut(s) 91, 190, 301
BstSLI GKGCMC 1 cut(s) 729
BstV1I GCAGC 3 cut(s) 71, 551, 610
BstV2I GAAGAC 2 cut(s) 314, 1013
BstX2I RGATCY 1 cut(s) 295
BstYI RGATCY 1 cut(s) 295
BsuRI GGCC 3 cut(s) 787, 983, 1238
BtgI CCRYGG 1 cut(s) 587
BtsCI GGATG 2 cut(s) 27, 742
BtsIMutI CAGTG 2 cut(s) 276, 325
Cac8I GCNNGC 6 cut(s) 596, 785, 955, 972, 994, 1269
CfoI GCGC 1 cut(s) 1181
Cfr10I RCCGGY 1 cut(s) 365
Cfr13I GGNCC 2 cut(s) 786, 1237
Csp6I GTAC 4 cut(s) 22, 244, 517, 916
CviAII CATG 6 cut(s) 200, 588, 595, 941, 950, 1065
CviQI GTAC 4 cut(s) 22, 244, 517, 916
DdeI CTNAG 3 cut(s) 149, 272, 966
DpnI GATC 4 cut(s) 297, 1059, 1147, 1263
DpnII GATC 4 cut(s) 295, 1057, 1145, 1261
Eam1104I CTCTTC 2 cut(s) 813, 1109
EarI CTCTTC 2 cut(s) 813, 1109
EciI GGCGGA 1 cut(s) 54
Eco130I CCWWGG 1 cut(s) 587
Eco31I GGTCTC 2 cut(s) 530, 1286
Eco88I CYCGRG 3 cut(s) 63, 170, 527
EcoO109I RGGNCCY 1 cut(s) 786
EcoRII CCWGG 3 cut(s) 91, 190, 301
EcoT14I CCWWGG 1 cut(s) 587
EcoT22I ATGCAT 1 cut(s) 850
ErhI CCWWGG 1 cut(s) 587
FaeI CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FaqI GGGAC 1 cut(s) 822
FatI CATG 6 cut(s) 199, 587, 594, 940, 949, 1064
FauI CCCGC 1 cut(s) 1055
FblI GTMKAC 1 cut(s) 945
Fnu4HI GCNGC 7 cut(s) 6, 37, 60, 540, 624, 832, 1195
FokI GGATG 2 cut(s) 14, 749
Fsp4HI GCNGC 7 cut(s) 6, 37, 60, 540, 624, 832, 1195
FspBI CTAG 3 cut(s) 101, 183, 1293
GlaI GCGC 1 cut(s) 1180
GluI GCNGC 7 cut(s) 6, 37, 60, 540, 624, 832, 1195
GsuI CTGGAG 1 cut(s) 1208
HaeIII GGCC 3 cut(s) 787, 983, 1238
HapII CCGG 2 cut(s) 366, 1202
HhaI GCGC 1 cut(s) 1181
Hin1II CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
Hin6I GCGC 1 cut(s) 1179
HinP1I GCGC 1 cut(s) 1179
HincII GTYRAC 1 cut(s) 946
HindII GTYRAC 1 cut(s) 946
HinfI GANTC 7 cut(s) 42, 173, 268, 310, 332, 349, 701
HpaII CCGG 2 cut(s) 366, 1202
HphI GGTGA 3 cut(s) 899, 1091, 1103
Hpy166II GTNNAC 3 cut(s) 577, 727, 946
Hpy188I TCNGA 4 cut(s) 391, 616, 870, 1109
Hpy188III TCNNGA 5 cut(s) 65, 236, 527, 1187, 1202
Hpy8I GTNNAC 3 cut(s) 577, 727, 946
HpyAV CCTTC 6 cut(s) 346, 487, 1040, 1063, 1162, 1271
HpyCH4III ACNGT 7 cut(s) 376, 679, 745, 1012, 1079, 1099, 1115
HpyCH4IV ACGT 2 cut(s) 24, 139
HpyCH4V TGCA 8 cut(s) 59, 146, 539, 594, 727, 848, 953, 1232
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
HpyF3I CTNAG 3 cut(s) 149, 272, 966
HpySE526I ACGT 2 cut(s) 24, 139
Hsp92II CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
HspAI GCGC 1 cut(s) 1179
Kpn2I TCCGGA 1 cut(s) 1201
Kzo9I GATC 4 cut(s) 295, 1057, 1145, 1261
LguI GCTCTTC 1 cut(s) 1109
LmnI GCTCC 3 cut(s) 133, 407, 1055
Lsp1109I GCAGC 3 cut(s) 71, 551, 610
LweI GCATC 3 cut(s) 403, 439, 835
MaeI CTAG 3 cut(s) 101, 183, 1293
MaeII ACGT 2 cut(s) 24, 139
MaeIII GTNAC 1 cut(s) 1079
MalI GATC 4 cut(s) 297, 1059, 1147, 1263
MbiI CCGCTC 1 cut(s) 1050
MboI GATC 4 cut(s) 295, 1057, 1145, 1261
MboII GAAGA 9 cut(s) 22, 290, 319, 418, 830, 844, 1018, 1030, 1096
MflI RGATCY 1 cut(s) 295
MhlI GDGCHC 2 cut(s) 729, 1104
MluCI AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
MlyI GAGTC 5 cut(s) 51, 182, 304, 343, 695
MmeI TCCRAC 2 cut(s) 190, 487
Mph1103I ATGCAT 1 cut(s) 850
MroI TCCGGA 1 cut(s) 1201
MroXI GAANNNNTTC 2 cut(s) 14, 267
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 2 cut(s) 366, 1202
MspR9I CCNGG 3 cut(s) 93, 192, 303
Mva1269I GAATGC 1 cut(s) 848
MvaI CCWGG 3 cut(s) 93, 192, 303
MwoI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
NcoI CCATGG 1 cut(s) 587
NdeII GATC 4 cut(s) 295, 1057, 1145, 1261
NlaIII CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
NlaIV GGNNCC 3 cut(s) 129, 742, 788
NmeAIII GCCGAG 3 cut(s) 12, 26, 580
NmuCI GTSAC 1 cut(s) 1079
NsiI ATGCAT 1 cut(s) 850
NspI RCATGY 2 cut(s) 598, 944
PaeI GCATGC 1 cut(s) 598
PaeR7I CTCGAG 1 cut(s) 527
PciSI GCTCTTC 1 cut(s) 1109
PctI GAATGC 1 cut(s) 848
PdmI GAANNNNTTC 2 cut(s) 14, 267
PfeI GAWTC 2 cut(s) 268, 332
PkrI GCNGC 7 cut(s) 7, 38, 61, 541, 625, 833, 1196
PleI GAGTC 5 cut(s) 50, 181, 304, 343, 695
PpsI GAGTC 5 cut(s) 50, 181, 304, 343, 695
PshAI GACNNNNGTC 1 cut(s) 314
PsiI TTATAA 2 cut(s) 380, 645
Psp6I CCWGG 3 cut(s) 91, 190, 301
PspGI CCWGG 3 cut(s) 91, 190, 301
PspN4I GGNNCC 3 cut(s) 129, 742, 788
PspPI GGNCC 2 cut(s) 786, 1237
PsrI GAACNNNNNNTAC 1 cut(s) 37
PsuI RGATCY 1 cut(s) 295
RsaI GTAC 4 cut(s) 23, 245, 518, 917
RsaNI GTAC 4 cut(s) 22, 244, 517, 916
SalI GTCGAC 1 cut(s) 944
SapI GCTCTTC 1 cut(s) 1109
SatI GCNGC 7 cut(s) 6, 37, 60, 540, 624, 832, 1195
Sau3AI GATC 4 cut(s) 295, 1057, 1145, 1261
Sau96I GGNCC 2 cut(s) 786, 1237
SchI GAGTC 5 cut(s) 51, 182, 304, 343, 695
ScrFI CCNGG 3 cut(s) 93, 192, 303
SduI GDGCHC 2 cut(s) 729, 1104
SfaNI GCATC 3 cut(s) 403, 439, 835
Sfr274I CTCGAG 1 cut(s) 527
SlaI CTCGAG 1 cut(s) 527
SmlI CTYRAG 2 cut(s) 86, 527
SmoI CTYRAG 2 cut(s) 86, 527
SphI GCATGC 1 cut(s) 598
Sse9I AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
SsiI CCGC 7 cut(s) 5, 36, 39, 122, 831, 1048, 1194
SspMI CTAG 3 cut(s) 101, 183, 1293
StyD4I CCNGG 3 cut(s) 91, 190, 301
StyI CCWWGG 1 cut(s) 587
TaaI ACNGT 7 cut(s) 376, 679, 745, 1012, 1079, 1099, 1115
TaiI ACGT 2 cut(s) 27, 142
TaqI TCGA 4 cut(s) 528, 816, 945, 1056
TasI AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
TatI WGTACW 1 cut(s) 915
TauI GCSGC 4 cut(s) 8, 39, 834, 1197
TfiI GAWTC 2 cut(s) 268, 332
TscAI CASTG 2 cut(s) 283, 325
TseFI GTSAC 1 cut(s) 1079
TseI GCWGC 3 cut(s) 59, 539, 623
Tsp45I GTSAC 1 cut(s) 1079
TspDTI ATGAA 3 cut(s) 188, 480, 1053
TspGWI ACGGA 1 cut(s) 1289
TspRI CASTG 2 cut(s) 283, 325
Vha464I CTTAAG 1 cut(s) 86
VneI GTGCAC 1 cut(s) 725
XceI RCATGY 2 cut(s) 598, 944
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 527
XmiI GTMKAC 1 cut(s) 945
XmnI GAANNNNTTC 2 cut(s) 14, 267
XspI CTAG 3 cut(s) 101, 183, 1293
Zsp2I ATGCAT 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.