MD14G1018700.v1.1

Monodehydroascorbate

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
1759644 .. 1763364
3721 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1018700.v1.1.491

Sequence Viewer

Length: 1305 bp
ATGGGGGCGAAGAACTTCAAGTACGTGATCCTCGGCGGCGGCGTCTCAGCTGGATATGCAGCTCGGGAGTTTGCCAAACAGGGCCTTAAGCCAGGCGAACTAGCGGTCATTTCCAAAGAGGCGGTGGCTCCCTATGAACGTCCTGCACTCAGCAAGGCTTATCTCTTCCCCGAGTCTCCTGCTAGACTTCCCGGGTTTCATGTCTGCGTTGGAAGTGGAGGAGAGAGATTGCTTCCTGACTGGTACAAGGAGAAAGGGATAGAATTGATTCTTAACACTGAAATAGTTAACGCTGATCTTCCCGGGAAGACTCTTGTCAGTGGATCTGGGGAATCCTTCAAGTACCAGACTCTTGTCATTGCCACTGGCTCAACTGTTATAAGATTGACAGATTTTGGTGTCAAAGGAGCTGATGCCAAAAACATCTTCTATTTGAGAGAAATTGATGATGCCGATAAACTCTACGAAGCAATTAAAGCAAAGAAGAATGGGAAGGCTGTGATTGTTGGAGGAGGGTACATTGGTCTCGAGCTTGGTGCAGTTTTGAAAATTAACAATTTAGATGTTAAAATGGTTTACCCTGAACCATGGTGCATGCCTCGACTTTTCACTTCTGGTATTGCTGCTTTTTATGAGGGCTATTATCAAAACAAAGGAGTTAAAATCATCAAGGGAACAGTTGCGACTGGATTTACAGCTGACTCAAATGGAGAAGTCAAGGAAGTGCACCTAAAGGATGGCACCGTGCTTGAAGCTGACATCGTTGTTGTTGGTGTTGGAGGCAGGCCCCTGACAACATTGTTCAAGGGACAAGTCGAAGAGGAGAAAGGCGGCATTAAGACGGATGCTTTCTTCAAAACAAGTGTTCCGGATGTATATGCTGTGGGCGATGTCGCCACTTTTCCTTTGAAGTTGTACAATGAGATTAGAAGAGTTGAGCATGTCGATCATGCACGCAAATCTGCTGAGCAGGCTGTAAAGGCCATCAAGGCAAGCGAGGAGGGGAAGACAGTTGAGGAGTACGACTACCTTCCATACTTCTATTCCCGCTCCTTTGATCTTTCATGGCAATTCTACGGTGACAATGTTGGTGAAACCGTGCTCTTCGGAGACAGTAATCCTGCGACACCAAAGGCGAAGTTTGGAACATACTGGATCAAAGACAGGAAGGTGGTCGGAGCGTTTCTGGAAGGCGGCACTCCGGAGGAAAACCAGGCTATTGCCAAAGTTGCAAAGGCCCAACCTCCGGTTGCGAGTTTAGATCAGCTTGCTGCGGAAGGTCTCTCTTTCGCTTGTAAGATCTAA

Protein Analysis

435

Amino Acids

47.03

Weight (kDa)

6.51

Isoelectric Point (pI)

28.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 6 - 322 5e-60 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 165 - 247 2e-13 Pyridine nucleotide-disulphide oxidoreductase
MDHAR3-like_C PF21791 344 - 431 8.3e-42 Monodehydroascorbate reductase 3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 380
AccB1I GGYRCC 1 cut(s) 740
AccBSI CCGCTC 1 cut(s) 1050
AccIII TCCGGA 2 cut(s) 868, 1201
AciI CCGC 8 cut(s) 36, 39, 104, 122, 831, 1048, 1194, 1274
AclWI GGATC 3 cut(s) 22, 331, 1163
AcyI GRCGYC 1 cut(s) 42
AfaI GTAC 6 cut(s) 23, 245, 344, 518, 917, 1022
AfiI CCNNNNNNNGG 1 cut(s) 1246
AflII CTTAAG 1 cut(s) 86
AgsI TTSAA 7 cut(s) 19, 340, 547, 752, 805, 856, 910
AjnI CCWGG 2 cut(s) 91, 1212
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AluBI AGCT 7 cut(s) 50, 62, 410, 532, 698, 755, 1267
AluI AGCT 7 cut(s) 50, 62, 410, 532, 698, 755, 1267
Alw21I GWGCWC 2 cut(s) 729, 1104
Alw26I GTCTC 5 cut(s) 49, 180, 530, 1104, 1286
Alw44I GTGCAC 1 cut(s) 725
AlwI GGATC 3 cut(s) 22, 331, 1163
Ama87I CYCGRG 5 cut(s) 63, 170, 191, 302, 527
Aor13HI TCCGGA 2 cut(s) 868, 1201
AoxI GGCC 4 cut(s) 82, 785, 981, 1236
ApaLI GTGCAC 1 cut(s) 725
ApeKI GCWGC 3 cut(s) 59, 623, 1271
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
Asp700I GAANNNNTTC 2 cut(s) 14, 267
AspS9I GGNCC 3 cut(s) 82, 786, 1237
AsuC2I CCSGG 4 cut(s) 192, 193, 303, 304
AsuHPI GGTGA 2 cut(s) 1091, 1103
AvaI CYCGRG 5 cut(s) 63, 170, 191, 302, 527
BaeGI GKGCMC 1 cut(s) 729
BaeI ACNNNNGTAYC 2 cut(s) 508, 541
BanI GGYRCC 1 cut(s) 740
BbsI GAAGAC 2 cut(s) 314, 1013
Bbv12I GWGCWC 2 cut(s) 729, 1104
BbvI GCAGC 3 cut(s) 71, 610, 1258
BccI CCATC 2 cut(s) 731, 992
BcgI CGANNNNNNTGC 4 cut(s) 161, 195, 518, 552
BciT130I CCWGG 2 cut(s) 93, 1214
BcnI CCSGG 4 cut(s) 192, 193, 303, 304
BcoDI GTCTC 5 cut(s) 49, 180, 530, 1104, 1286
BfaI CTAG 2 cut(s) 101, 183
BfrI CTTAAG 1 cut(s) 86
BglI GCCNNNNNGGC 1 cut(s) 989
BglII AGATCT 1 cut(s) 1299
BisI GCNGC 7 cut(s) 37, 40, 60, 624, 832, 1195, 1272
BlpI GCTNAGC 1 cut(s) 966
BlsI GCNGC 7 cut(s) 38, 41, 61, 625, 833, 1196, 1273
Bme1390I CCNGG 6 cut(s) 93, 192, 193, 303, 304, 1214
BmeT110I CYCGRG 5 cut(s) 63, 170, 191, 302, 527
BmgT120I GGNCC 3 cut(s) 82, 786, 1237
BmiI GGNNCC 3 cut(s) 129, 742, 788
BmrFI CCNGG 6 cut(s) 93, 192, 193, 303, 304, 1214
BmsI GCATC 3 cut(s) 403, 439, 835
BoxI GACNNNNGTC 2 cut(s) 314, 353
BpiI GAAGAC 2 cut(s) 314, 1013
Bpu1102I GCTNAGC 1 cut(s) 966
BpuMI CCSGG 4 cut(s) 192, 193, 303, 304
BsaAI YACGTR 1 cut(s) 25
BsaHI GRCGYC 1 cut(s) 42
BsaI GGTCTC 2 cut(s) 530, 1286
BsaJI CCNNGG 4 cut(s) 31, 191, 302, 587
BsaWI WCCGGW 3 cut(s) 868, 1201, 1246
Bsc4I CCNNNNNNNGG 1 cut(s) 1246
Bse1I ACTGG 4 cut(s) 245, 370, 691, 1157
Bse3DI GCAATG 1 cut(s) 357
BseAI TCCGGA 2 cut(s) 868, 1201
BseBI CCWGG 2 cut(s) 93, 1214
BseDI CCNNGG 4 cut(s) 31, 191, 302, 587
BseGI GGATG 3 cut(s) 742, 850, 877
BseLI CCNNNNNNNGG 1 cut(s) 1246
BseMI GCAATG 1 cut(s) 357
BseMII CTCAG 3 cut(s) 60, 163, 957
BseNI ACTGG 4 cut(s) 245, 370, 691, 1157
BseRI GAGGAG 5 cut(s) 234, 525, 836, 1013, 1031
BseSI GKGCMC 1 cut(s) 729
BseXI GCAGC 3 cut(s) 71, 610, 1258
BsgI GTGCAG 2 cut(s) 129, 558
BshFI GGCC 4 cut(s) 84, 787, 983, 1238
BshNI GGYRCC 1 cut(s) 740
BsiHKAI GWGCWC 2 cut(s) 729, 1104
BsiHKCI CYCGRG 5 cut(s) 63, 170, 191, 302, 527
BsiSI CCGG 5 cut(s) 192, 303, 869, 1202, 1247
BslFI GGGAC 1 cut(s) 822
BslI CCNNNNNNNGG 1 cut(s) 1246
BsmAI GTCTC 5 cut(s) 49, 180, 530, 1104, 1286
BsmBI CGTCTC 1 cut(s) 49
BsmFI GGGAC 1 cut(s) 822
BsnI GGCC 4 cut(s) 84, 787, 983, 1238
Bso31I GGTCTC 2 cut(s) 530, 1286
BsoBI CYCGRG 5 cut(s) 63, 170, 191, 302, 527
Bsp1286I GDGCHC 2 cut(s) 729, 1104
Bsp13I TCCGGA 2 cut(s) 868, 1201
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 8 cut(s) 27, 295, 323, 946, 1057, 1155, 1261, 1299
Bsp1720I GCTNAGC 1 cut(s) 966
Bsp19I CCATGG 1 cut(s) 587
BspACI CCGC 8 cut(s) 36, 39, 104, 122, 831, 1048, 1194, 1274
BspANI GGCC 4 cut(s) 84, 787, 983, 1238
BspCNI CTCAG 3 cut(s) 59, 162, 958
BspEI TCCGGA 2 cut(s) 868, 1201
BspLI GGNNCC 3 cut(s) 129, 742, 788
BspPI GGATC 3 cut(s) 22, 331, 1163
BspQI GCTCTTC 1 cut(s) 1109
BspT107I GGYRCC 1 cut(s) 740
BspTI CTTAAG 1 cut(s) 86
BspTNI GGTCTC 2 cut(s) 530, 1286
BsrBI CCGCTC 1 cut(s) 1050
BsrDI GCAATG 1 cut(s) 357
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 4 cut(s) 245, 370, 691, 1157
BssECI CCNNGG 4 cut(s) 31, 191, 302, 587
BssMI GATC 8 cut(s) 27, 295, 323, 946, 1057, 1155, 1261, 1299
BssNI GRCGYC 1 cut(s) 42
BssT1I CCWWGG 1 cut(s) 587
Bst2UI CCWGG 2 cut(s) 93, 1214
Bst4CI ACNGT 7 cut(s) 376, 679, 745, 1012, 1079, 1099, 1115
Bst6I CTCTTC 4 cut(s) 170, 813, 925, 1109
BstACI GRCGYC 1 cut(s) 42
BstAFI CTTAAG 1 cut(s) 86
BstAUI TGTACA 1 cut(s) 915
BstBAI YACGTR 1 cut(s) 25
BstC8I GCNNGC 6 cut(s) 596, 785, 955, 972, 994, 1269
BstDEI CTNAG 3 cut(s) 46, 149, 966
BstDSI CCRYGG 1 cut(s) 587
BstF5I GGATG 3 cut(s) 742, 850, 877
BstKTI GATC 8 cut(s) 30, 298, 326, 949, 1060, 1158, 1264, 1302
BstMAI GTCTC 5 cut(s) 49, 180, 530, 1104, 1286
BstMBI GATC 8 cut(s) 27, 295, 323, 946, 1057, 1155, 1261, 1299
BstMWI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
BstNI CCWGG 2 cut(s) 93, 1214
BstNSI RCATGY 2 cut(s) 598, 944
BstPAI GACNNNNGTC 2 cut(s) 314, 353
BstSCI CCNGG 6 cut(s) 91, 190, 191, 301, 302, 1212
BstSLI GKGCMC 1 cut(s) 729
BstV1I GCAGC 3 cut(s) 71, 610, 1258
BstV2I GAAGAC 2 cut(s) 314, 1013
BstX2I RGATCY 2 cut(s) 323, 1299
BstYI RGATCY 2 cut(s) 323, 1299
BsuRI GGCC 4 cut(s) 84, 787, 983, 1238
BtgI CCRYGG 1 cut(s) 587
BtgZI GCGATG 1 cut(s) 903
BtsCI GGATG 3 cut(s) 742, 850, 877
BtsIMutI CAGTG 3 cut(s) 276, 325, 363
Cac8I GCNNGC 6 cut(s) 596, 785, 955, 972, 994, 1269
Cfr13I GGNCC 3 cut(s) 82, 786, 1237
Cfr9I CCCGGG 2 cut(s) 191, 302
CseI GACGC 1 cut(s) 31
Csp6I GTAC 6 cut(s) 22, 244, 343, 517, 916, 1021
CviAII CATG 6 cut(s) 200, 588, 595, 941, 950, 1065
CviQI GTAC 6 cut(s) 22, 244, 343, 517, 916, 1021
DdeI CTNAG 3 cut(s) 46, 149, 966
DpnI GATC 8 cut(s) 29, 297, 325, 948, 1059, 1157, 1263, 1301
DpnII GATC 8 cut(s) 27, 295, 323, 946, 1057, 1155, 1261, 1299
Eam1104I CTCTTC 4 cut(s) 170, 813, 925, 1109
EarI CTCTTC 4 cut(s) 170, 813, 925, 1109
Eco130I CCWWGG 1 cut(s) 587
Eco31I GGTCTC 2 cut(s) 530, 1286
Eco88I CYCGRG 5 cut(s) 63, 170, 191, 302, 527
EcoO109I RGGNCCY 2 cut(s) 82, 786
EcoRII CCWGG 2 cut(s) 91, 1212
EcoT14I CCWWGG 1 cut(s) 587
ErhI CCWWGG 1 cut(s) 587
Esp3I CGTCTC 1 cut(s) 49
FaeI CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
FaqI GGGAC 1 cut(s) 822
FatI CATG 6 cut(s) 199, 587, 594, 940, 949, 1064
FauI CCCGC 1 cut(s) 1055
Fnu4HI GCNGC 7 cut(s) 37, 40, 60, 624, 832, 1195, 1272
FokI GGATG 3 cut(s) 749, 857, 884
Fsp4HI GCNGC 7 cut(s) 37, 40, 60, 624, 832, 1195, 1272
FspBI CTAG 2 cut(s) 101, 183
GluI GCNGC 7 cut(s) 37, 40, 60, 624, 832, 1195, 1272
HaeIII GGCC 4 cut(s) 84, 787, 983, 1238
HapII CCGG 5 cut(s) 192, 303, 869, 1202, 1247
HgaI GACGC 1 cut(s) 31
Hin1I GRCGYC 1 cut(s) 42
Hin1II CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
HincII GTYRAC 1 cut(s) 289
HindII GTYRAC 1 cut(s) 289
HinfI GANTC 6 cut(s) 173, 268, 310, 332, 349, 701
HpaI GTTAAC 1 cut(s) 289
HpaII CCGG 5 cut(s) 192, 303, 869, 1202, 1247
HphI GGTGA 2 cut(s) 1091, 1103
Hpy166II GTNNAC 3 cut(s) 289, 577, 727
Hpy188I TCNGA 2 cut(s) 1109, 1178
Hpy188III TCNNGA 6 cut(s) 65, 236, 527, 869, 1187, 1202
Hpy8I GTNNAC 3 cut(s) 289, 577, 727
HpyAV CCTTC 6 cut(s) 346, 487, 1040, 1162, 1184, 1271
HpyCH4III ACNGT 7 cut(s) 376, 679, 745, 1012, 1079, 1099, 1115
HpyCH4IV ACGT 2 cut(s) 24, 139
HpyCH4V TGCA 7 cut(s) 59, 146, 539, 594, 727, 953, 1232
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
HpyF3I CTNAG 3 cut(s) 46, 149, 966
HpySE526I ACGT 2 cut(s) 24, 139
Hsp92I GRCGYC 1 cut(s) 42
Hsp92II CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
Kpn2I TCCGGA 2 cut(s) 868, 1201
KspAI GTTAAC 1 cut(s) 289
Kzo9I GATC 8 cut(s) 27, 295, 323, 946, 1057, 1155, 1261, 1299
LguI GCTCTTC 1 cut(s) 1109
LmnI GCTCC 4 cut(s) 133, 407, 1055, 1178
Lsp1109I GCAGC 3 cut(s) 71, 610, 1258
LweI GCATC 3 cut(s) 403, 439, 835
MaeI CTAG 2 cut(s) 101, 183
MaeII ACGT 2 cut(s) 24, 139
MaeIII GTNAC 1 cut(s) 1079
MalI GATC 8 cut(s) 29, 297, 325, 948, 1059, 1157, 1263, 1301
MbiI CCGCTC 1 cut(s) 1050
MboI GATC 8 cut(s) 27, 295, 323, 946, 1057, 1155, 1261, 1299
MflI RGATCY 2 cut(s) 323, 1299
MhlI GDGCHC 2 cut(s) 729, 1104
MluCI AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
MlyI GAGTC 4 cut(s) 182, 304, 343, 695
MmeI TCCRAC 4 cut(s) 190, 487, 757, 1156
MroI TCCGGA 2 cut(s) 868, 1201
MroXI GAANNNNTTC 2 cut(s) 14, 267
MseI TTAA 8 cut(s) 87, 273, 288, 474, 552, 567, 660, 837
MspA1I CMGCKG 2 cut(s) 50, 698
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 5 cut(s) 192, 303, 869, 1202, 1247
MspR9I CCNGG 6 cut(s) 93, 192, 193, 303, 304, 1214
MvaI CCWGG 2 cut(s) 93, 1214
MwoI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
NciI CCSGG 4 cut(s) 192, 193, 303, 304
NcoI CCATGG 1 cut(s) 587
NdeII GATC 8 cut(s) 27, 295, 323, 946, 1057, 1155, 1261, 1299
NlaIII CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
NlaIV GGNNCC 3 cut(s) 129, 742, 788
NmeAIII GCCGAG 1 cut(s) 12
NmuCI GTSAC 1 cut(s) 1079
NspI RCATGY 2 cut(s) 598, 944
PaeI GCATGC 1 cut(s) 598
PaeR7I CTCGAG 1 cut(s) 527
PciSI GCTCTTC 1 cut(s) 1109
PcsI WCGNNNNNNNCGW 1 cut(s) 39
PdmI GAANNNNTTC 2 cut(s) 14, 267
PfeI GAWTC 2 cut(s) 268, 332
PkrI GCNGC 7 cut(s) 38, 41, 61, 625, 833, 1196, 1273
PleI GAGTC 4 cut(s) 181, 304, 343, 695
PpsI GAGTC 4 cut(s) 181, 304, 343, 695
Ppu21I YACGTR 1 cut(s) 25
PshAI GACNNNNGTC 2 cut(s) 314, 353
PsiI TTATAA 1 cut(s) 380
Psp6I CCWGG 2 cut(s) 91, 1212
PspGI CCWGG 2 cut(s) 91, 1212
PspN4I GGNNCC 3 cut(s) 129, 742, 788
PspPI GGNCC 3 cut(s) 82, 786, 1237
PsrI GAACNNNNNNTAC 1 cut(s) 37
PsuI RGATCY 2 cut(s) 323, 1299
PvuII CAGCTG 2 cut(s) 50, 698
RsaI GTAC 6 cut(s) 23, 245, 344, 518, 917, 1022
RsaNI GTAC 6 cut(s) 22, 244, 343, 517, 916, 1021
SapI GCTCTTC 1 cut(s) 1109
SaqAI TTAA 8 cut(s) 87, 273, 288, 474, 552, 567, 660, 837
SatI GCNGC 7 cut(s) 37, 40, 60, 624, 832, 1195, 1272
Sau3AI GATC 8 cut(s) 27, 295, 323, 946, 1057, 1155, 1261, 1299
Sau96I GGNCC 3 cut(s) 82, 786, 1237
SchI GAGTC 4 cut(s) 182, 304, 343, 695
ScrFI CCNGG 6 cut(s) 93, 192, 193, 303, 304, 1214
SduI GDGCHC 2 cut(s) 729, 1104
SfaNI GCATC 3 cut(s) 403, 439, 835
Sfr274I CTCGAG 1 cut(s) 527
SlaI CTCGAG 1 cut(s) 527
SmaI CCCGGG 2 cut(s) 193, 304
SmlI CTYRAG 2 cut(s) 86, 527
SmoI CTYRAG 2 cut(s) 86, 527
SphI GCATGC 1 cut(s) 598
Sse9I AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
SsiI CCGC 8 cut(s) 36, 39, 104, 122, 831, 1048, 1194, 1274
SspMI CTAG 2 cut(s) 101, 183
StyD4I CCNGG 6 cut(s) 91, 190, 191, 301, 302, 1212
StyI CCWWGG 1 cut(s) 587
TaaI ACNGT 7 cut(s) 376, 679, 745, 1012, 1079, 1099, 1115
TaiI ACGT 2 cut(s) 27, 142
TaqI TCGA 4 cut(s) 528, 601, 816, 945
TasI AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
TatI WGTACW 1 cut(s) 915
TauI GCSGC 4 cut(s) 39, 42, 834, 1197
TfiI GAWTC 2 cut(s) 268, 332
Tru1I TTAA 8 cut(s) 87, 273, 288, 474, 552, 567, 660, 837
Tru9I TTAA 8 cut(s) 87, 273, 288, 474, 552, 567, 660, 837
TscAI CASTG 3 cut(s) 283, 325, 370
TseFI GTSAC 1 cut(s) 1079
TseI GCWGC 3 cut(s) 59, 623, 1271
Tsp45I GTSAC 1 cut(s) 1079
TspDTI ATGAA 3 cut(s) 150, 188, 1053
TspGWI ACGGA 1 cut(s) 857
TspMI CCCGGG 2 cut(s) 191, 302
TspRI CASTG 3 cut(s) 283, 325, 370
Vha464I CTTAAG 1 cut(s) 86
VneI GTGCAC 1 cut(s) 725
XceI RCATGY 2 cut(s) 598, 944
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 527
XmaI CCCGGG 2 cut(s) 191, 302
XmnI GAANNNNTTC 2 cut(s) 14, 267
XspI CTAG 2 cut(s) 101, 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.