pycom12g02040

Monodehydroascorbate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
1743660 .. 1746834
3175 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g02040.3

Sequence Viewer

Length: 1305 bp
ATGGCGGCGAAGAACTTCAAGTACGTCATCCTCGGCGGCGGAGTCTCGGCTGGTTATGCAGCTCGGGAGTTTGCCAAGCAGGGGCTTAAGCCAGGCGAACTAGCGGTCATTTCCAAAGAGGCGGTGGCTCCCTATGAACGTCCTGCACTCAGCAAGGCTTATCTCTTCCCCGAGTCTCCTGCTAGACTTCCTGGGTTTCATGTCTGCGTTGGAAGTGGAGGAGAAAGATTGCTTCCTGACTGGTACAAGGAGAAAGGAATAGAATTGATTCTTAGCACTGAAATAGTTAAAGCAGATCTTCCTGGGAAGACTCTTGTCAGTGGAACTGGGGAATCCTTCAAGTATGAGACTCTCGTCATTGCCACCGGCTCAACCGTTATAAGACTGACAGATTTTGGTGTCAAAGGAGCTGATGCCAAAAACATCTTCTATTTGAGAGAAATTGATGATGCCGATAAACTCAACGAAGCAATTAAAGCAAAAAAGAATGGGAAGGCTGTGATTGTTGGAGGAGGGTACATTGGTCTCGAGCTTGGTGCAGTTTTGAGAATTAACAATTTAGATGTTAAAATGGTTTACCCGGAACCATGGTGCATGCCTCGGCTTTTCACTTCTGATATTGCTGCTTTTTATGAGGGCTATTATAAAAACAAAGGAGTTCAAATCATCAAGGGAACAGTTGCGACTGGATTTACTGCTGACTCAAATGGAGAGGTTAAGGAAGTGCACCTAAAGGATGGCACCGTGCTTGAAGCTGACATCGTTGTTGTTGGTGTTGGGGGCAGGCCCCTGACAACATTGTTCAAGGGACAAGTCGAAGAGGAGAAGGGTGGCATTAAGACTGATGCATTCTTCAAAACAAGTGTTCCAAATGTATATGCTGTGGGTGATGTCGCCACTTTTCCTTTGAAGTTGTACAATGAGATTAGGAGAGTTGAGCATGTTGACCATGCACGCAAATCTGCTGAGCAGGCTGTAAAGGCCATCAAGGCAAGCGAGGAAGGGAAGACAGTTGAGGAGTATGACTACCTTCCATTCTTCTATTCCCGCTCCTTCGATCTTTCATGGCAATTCTATGGTGACAATGTTGGTGAAACTGTCCTCTTCGGCGACAGTAATCCTGCCACACCAAAGGCGAAGTTTGGATCATACTGGATTAAAGATGGGAAGGTGGTCGGAGCATTTCTGGAGGGCGGCACACCGGAGGAAAACCAGGCTATTGCCAAAGTTGCAAAGGCCCAACCTCCTGTTGCCAGTTTAGATCAGCTTGCTAAGGAAGGTCTCTCTTTCGCTAGTAAGATTTAA

Protein Analysis

435

Amino Acids

47.0

Weight (kDa)

6.51

Isoelectric Point (pI)

29.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 380, 645
AccB1I GGYRCC 1 cut(s) 740
AccBSI CCGCTC 1 cut(s) 1050
AciI CCGC 7 cut(s) 5, 36, 39, 104, 122, 1048, 1194
AclWI GGATC 1 cut(s) 1153
AfaI GTAC 4 cut(s) 23, 245, 518, 917
AfiI CCNNNNNNNGG 1 cut(s) 81
AflII CTTAAG 1 cut(s) 86
AgsI TTSAA 7 cut(s) 19, 340, 662, 752, 805, 856, 910
AjnI CCWGG 4 cut(s) 91, 190, 301, 1212
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AluBI AGCT 5 cut(s) 62, 410, 532, 755, 1267
AluI AGCT 5 cut(s) 62, 410, 532, 755, 1267
Alw21I GWGCWC 1 cut(s) 729
Alw26I GTCTC 5 cut(s) 49, 180, 341, 530, 1286
Alw44I GTGCAC 1 cut(s) 725
AlwI GGATC 1 cut(s) 1153
Ama87I CYCGRG 3 cut(s) 63, 170, 527
AoxI GGCC 3 cut(s) 785, 981, 1236
ApaLI GTGCAC 1 cut(s) 725
ApeKI GCWGC 2 cut(s) 59, 623
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
Asp700I GAANNNNTTC 2 cut(s) 14, 267
AspS9I GGNCC 2 cut(s) 786, 1237
AsuC2I CCSGG 1 cut(s) 581
AsuHPI GGTGA 3 cut(s) 899, 1091, 1103
AvaI CYCGRG 3 cut(s) 63, 170, 527
BaeGI GKGCMC 1 cut(s) 729
BaeI ACNNNNGTAYC 2 cut(s) 508, 541
BanI GGYRCC 1 cut(s) 740
BbsI GAAGAC 2 cut(s) 314, 1013
Bbv12I GWGCWC 1 cut(s) 729
BbvI GCAGC 2 cut(s) 71, 610
BccI CCATC 3 cut(s) 731, 992, 1157
BcgI CGANNNNNNTGC 4 cut(s) 161, 195, 518, 552
BciT130I CCWGG 4 cut(s) 93, 192, 303, 1214
BcnI CCSGG 1 cut(s) 581
BcoDI GTCTC 5 cut(s) 49, 180, 341, 530, 1286
BfaI CTAG 3 cut(s) 101, 183, 1293
BfrI CTTAAG 1 cut(s) 86
BglI GCCNNNNNGGC 1 cut(s) 989
BglII AGATCT 1 cut(s) 295
BisI GCNGC 5 cut(s) 6, 37, 60, 624, 1195
BlpI GCTNAGC 1 cut(s) 966
BlsI GCNGC 5 cut(s) 7, 38, 61, 625, 1196
Bme1390I CCNGG 5 cut(s) 93, 192, 303, 581, 1214
BmeT110I CYCGRG 3 cut(s) 63, 170, 527
BmgT120I GGNCC 2 cut(s) 786, 1237
BmiI GGNNCC 4 cut(s) 129, 585, 742, 788
BmrFI CCNGG 5 cut(s) 93, 192, 303, 581, 1214
BmrI ACTGGG 1 cut(s) 336
BmsI GCATC 3 cut(s) 403, 439, 835
BmuI ACTGGG 1 cut(s) 336
BoxI GACNNNNGTC 2 cut(s) 314, 353
BpiI GAAGAC 2 cut(s) 314, 1013
BpmI CTGGAG 1 cut(s) 1208
Bpu10I CCTNAGC 1 cut(s) 1272
Bpu1102I GCTNAGC 1 cut(s) 966
BpuMI CCSGG 1 cut(s) 581
BsaI GGTCTC 2 cut(s) 530, 1286
BsaJI CCNNGG 5 cut(s) 31, 191, 302, 587, 599
BsaWI WCCGGW 1 cut(s) 1201
Bsc4I CCNNNNNNNGG 1 cut(s) 81
Bse118I RCCGGY 1 cut(s) 365
Bse1I ACTGG 5 cut(s) 245, 331, 691, 1157, 1254
Bse3DI GCAATG 1 cut(s) 357
BseBI CCWGG 4 cut(s) 93, 192, 303, 1214
BseDI CCNNGG 5 cut(s) 31, 191, 302, 587, 599
BseGI GGATG 2 cut(s) 27, 742
BseLI CCNNNNNNNGG 1 cut(s) 81
BseMI GCAATG 1 cut(s) 357
BseMII CTCAG 2 cut(s) 163, 957
BseNI ACTGG 5 cut(s) 245, 331, 691, 1157, 1254
BseRI GAGGAG 4 cut(s) 234, 525, 836, 1031
BseSI GKGCMC 1 cut(s) 729
BseXI GCAGC 2 cut(s) 71, 610
BsgI GTGCAG 2 cut(s) 129, 558
BshFI GGCC 3 cut(s) 787, 983, 1238
BshNI GGYRCC 1 cut(s) 740
BsiHKAI GWGCWC 1 cut(s) 729
BsiHKCI CYCGRG 3 cut(s) 63, 170, 527
BsiSI CCGG 3 cut(s) 366, 581, 1202
BslFI GGGAC 1 cut(s) 822
BslI CCNNNNNNNGG 1 cut(s) 81
BsmAI GTCTC 5 cut(s) 49, 180, 341, 530, 1286
BsmFI GGGAC 1 cut(s) 822
BsmI GAATGC 1 cut(s) 848
BsnI GGCC 3 cut(s) 787, 983, 1238
Bso31I GGTCTC 2 cut(s) 530, 1286
BsoBI CYCGRG 3 cut(s) 63, 170, 527
Bsp1286I GDGCHC 1 cut(s) 729
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 4 cut(s) 295, 1057, 1145, 1261
Bsp1720I GCTNAGC 1 cut(s) 966
Bsp19I CCATGG 1 cut(s) 587
BspACI CCGC 7 cut(s) 5, 36, 39, 104, 122, 1048, 1194
BspANI GGCC 3 cut(s) 787, 983, 1238
BspCNI CTCAG 2 cut(s) 162, 958
BspLI GGNNCC 4 cut(s) 129, 585, 742, 788
BspPI GGATC 1 cut(s) 1153
BspT107I GGYRCC 1 cut(s) 740
BspTI CTTAAG 1 cut(s) 86
BspTNI GGTCTC 2 cut(s) 530, 1286
BsrBI CCGCTC 1 cut(s) 1050
BsrDI GCAATG 1 cut(s) 357
BsrFI RCCGGY 1 cut(s) 365
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 5 cut(s) 245, 331, 691, 1157, 1254
BssAI RCCGGY 1 cut(s) 365
BssECI CCNNGG 5 cut(s) 31, 191, 302, 587, 599
BssMI GATC 4 cut(s) 295, 1057, 1145, 1261
BssT1I CCWWGG 1 cut(s) 587
Bst2UI CCWGG 4 cut(s) 93, 192, 303, 1214
Bst4CI ACNGT 6 cut(s) 376, 679, 745, 1012, 1099, 1115
Bst6I CTCTTC 3 cut(s) 170, 813, 1109
BstAFI CTTAAG 1 cut(s) 86
BstAUI TGTACA 1 cut(s) 915
BstC8I GCNNGC 6 cut(s) 596, 785, 955, 972, 994, 1269
BstDEI CTNAG 4 cut(s) 149, 272, 966, 1272
BstDSI CCRYGG 1 cut(s) 587
BstF5I GGATG 2 cut(s) 27, 742
BstKTI GATC 4 cut(s) 298, 1060, 1148, 1264
BstMAI GTCTC 5 cut(s) 49, 180, 341, 530, 1286
BstMBI GATC 4 cut(s) 295, 1057, 1145, 1261
BstMWI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
BstNI CCWGG 4 cut(s) 93, 192, 303, 1214
BstNSI RCATGY 2 cut(s) 598, 944
BstPAI GACNNNNGTC 2 cut(s) 314, 353
BstSCI CCNGG 5 cut(s) 91, 190, 301, 579, 1212
BstSLI GKGCMC 1 cut(s) 729
BstV1I GCAGC 2 cut(s) 71, 610
BstV2I GAAGAC 2 cut(s) 314, 1013
BstX2I RGATCY 1 cut(s) 295
BstYI RGATCY 1 cut(s) 295
BsuRI GGCC 3 cut(s) 787, 983, 1238
BtgI CCRYGG 1 cut(s) 587
BtsCI GGATG 2 cut(s) 27, 742
BtsIMutI CAGTG 2 cut(s) 276, 325
Cac8I GCNNGC 6 cut(s) 596, 785, 955, 972, 994, 1269
Cfr10I RCCGGY 1 cut(s) 365
Cfr13I GGNCC 2 cut(s) 786, 1237
Csp6I GTAC 4 cut(s) 22, 244, 517, 916
CviAII CATG 6 cut(s) 200, 588, 595, 941, 950, 1065
CviQI GTAC 4 cut(s) 22, 244, 517, 916
DdeI CTNAG 4 cut(s) 149, 272, 966, 1272
DpnI GATC 4 cut(s) 297, 1059, 1147, 1263
DpnII GATC 4 cut(s) 295, 1057, 1145, 1261
Eam1104I CTCTTC 3 cut(s) 170, 813, 1109
EarI CTCTTC 3 cut(s) 170, 813, 1109
EciI GGCGGA 1 cut(s) 54
Eco130I CCWWGG 1 cut(s) 587
Eco31I GGTCTC 2 cut(s) 530, 1286
Eco88I CYCGRG 3 cut(s) 63, 170, 527
EcoO109I RGGNCCY 1 cut(s) 786
EcoRII CCWGG 4 cut(s) 91, 190, 301, 1212
EcoT14I CCWWGG 1 cut(s) 587
EcoT22I ATGCAT 1 cut(s) 850
ErhI CCWWGG 1 cut(s) 587
FaeI CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FaqI GGGAC 1 cut(s) 822
FatI CATG 6 cut(s) 199, 587, 594, 940, 949, 1064
FauI CCCGC 1 cut(s) 1055
Fnu4HI GCNGC 5 cut(s) 6, 37, 60, 624, 1195
FokI GGATG 2 cut(s) 14, 749
Fsp4HI GCNGC 5 cut(s) 6, 37, 60, 624, 1195
FspBI CTAG 3 cut(s) 101, 183, 1293
GluI GCNGC 5 cut(s) 6, 37, 60, 624, 1195
GsuI CTGGAG 1 cut(s) 1208
HaeIII GGCC 3 cut(s) 787, 983, 1238
HapII CCGG 3 cut(s) 366, 581, 1202
Hin1II CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
HincII GTYRAC 1 cut(s) 946
HindII GTYRAC 1 cut(s) 946
HinfI GANTC 7 cut(s) 42, 173, 268, 310, 332, 349, 701
HpaII CCGG 3 cut(s) 366, 581, 1202
HphI GGTGA 3 cut(s) 899, 1091, 1103
Hpy166II GTNNAC 3 cut(s) 577, 727, 946
Hpy188I TCNGA 2 cut(s) 616, 1178
Hpy188III TCNNGA 4 cut(s) 65, 236, 527, 1187
Hpy8I GTNNAC 3 cut(s) 577, 727, 946
HpyAV CCTTC 8 cut(s) 346, 487, 820, 995, 1040, 1063, 1162, 1271
HpyCH4III ACNGT 6 cut(s) 376, 679, 745, 1012, 1099, 1115
HpyCH4IV ACGT 2 cut(s) 24, 139
HpyCH4V TGCA 8 cut(s) 59, 146, 539, 594, 727, 848, 953, 1232
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
HpyF3I CTNAG 4 cut(s) 149, 272, 966, 1272
HpySE526I ACGT 2 cut(s) 24, 139
Hsp92II CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
Kzo9I GATC 4 cut(s) 295, 1057, 1145, 1261
LmnI GCTCC 4 cut(s) 133, 407, 1055, 1178
Lsp1109I GCAGC 2 cut(s) 71, 610
LweI GCATC 3 cut(s) 403, 439, 835
MaeI CTAG 3 cut(s) 101, 183, 1293
MaeII ACGT 2 cut(s) 24, 139
MaeIII GTNAC 1 cut(s) 1079
MalI GATC 4 cut(s) 297, 1059, 1147, 1263
MbiI CCGCTC 1 cut(s) 1050
MboI GATC 4 cut(s) 295, 1057, 1145, 1261
MflI RGATCY 1 cut(s) 295
MhlI GDGCHC 1 cut(s) 729
MluCI AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
MlyI GAGTC 5 cut(s) 51, 182, 304, 343, 695
MmeI TCCRAC 3 cut(s) 190, 487, 1156
Mph1103I ATGCAT 1 cut(s) 850
MroXI GAANNNNTTC 2 cut(s) 14, 267
MseI TTAA 9 cut(s) 87, 288, 474, 552, 567, 717, 837, 1158, 1303
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 3 cut(s) 366, 581, 1202
MspR9I CCNGG 5 cut(s) 93, 192, 303, 581, 1214
Mva1269I GAATGC 1 cut(s) 848
MvaI CCWGG 4 cut(s) 93, 192, 303, 1214
MwoI GCNNNNNNNGC 6 cut(s) 56, 476, 971, 980, 989, 1229
NciI CCSGG 1 cut(s) 581
NcoI CCATGG 1 cut(s) 587
NdeII GATC 4 cut(s) 295, 1057, 1145, 1261
NlaIII CATG 6 cut(s) 203, 591, 598, 944, 953, 1068
NlaIV GGNNCC 4 cut(s) 129, 585, 742, 788
NmeAIII GCCGAG 3 cut(s) 12, 26, 580
NmuCI GTSAC 1 cut(s) 1079
NsiI ATGCAT 1 cut(s) 850
NspI RCATGY 2 cut(s) 598, 944
PaeI GCATGC 1 cut(s) 598
PaeR7I CTCGAG 1 cut(s) 527
PctI GAATGC 1 cut(s) 848
PdmI GAANNNNTTC 2 cut(s) 14, 267
PfeI GAWTC 2 cut(s) 268, 332
PkrI GCNGC 5 cut(s) 7, 38, 61, 625, 1196
PleI GAGTC 5 cut(s) 50, 181, 304, 343, 695
PpsI GAGTC 5 cut(s) 50, 181, 304, 343, 695
PshAI GACNNNNGTC 2 cut(s) 314, 353
PsiI TTATAA 2 cut(s) 380, 645
Psp6I CCWGG 4 cut(s) 91, 190, 301, 1212
PspGI CCWGG 4 cut(s) 91, 190, 301, 1212
PspN4I GGNNCC 4 cut(s) 129, 585, 742, 788
PspPI GGNCC 2 cut(s) 786, 1237
PsrI GAACNNNNNNTAC 1 cut(s) 37
PsuI RGATCY 1 cut(s) 295
RsaI GTAC 4 cut(s) 23, 245, 518, 917
RsaNI GTAC 4 cut(s) 22, 244, 517, 916
SaqAI TTAA 9 cut(s) 87, 288, 474, 552, 567, 717, 837, 1158, 1303
SatI GCNGC 5 cut(s) 6, 37, 60, 624, 1195
Sau3AI GATC 4 cut(s) 295, 1057, 1145, 1261
Sau96I GGNCC 2 cut(s) 786, 1237
SchI GAGTC 5 cut(s) 51, 182, 304, 343, 695
ScrFI CCNGG 5 cut(s) 93, 192, 303, 581, 1214
SduI GDGCHC 1 cut(s) 729
SfaNI GCATC 3 cut(s) 403, 439, 835
Sfr274I CTCGAG 1 cut(s) 527
SlaI CTCGAG 1 cut(s) 527
SmlI CTYRAG 2 cut(s) 86, 527
SmoI CTYRAG 2 cut(s) 86, 527
SphI GCATGC 1 cut(s) 598
Sse9I AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
SsiI CCGC 7 cut(s) 5, 36, 39, 104, 122, 1048, 1194
SspMI CTAG 3 cut(s) 101, 183, 1293
StyD4I CCNGG 5 cut(s) 91, 190, 301, 579, 1212
StyI CCWWGG 1 cut(s) 587
TaaI ACNGT 6 cut(s) 376, 679, 745, 1012, 1099, 1115
TaiI ACGT 2 cut(s) 27, 142
TaqI TCGA 3 cut(s) 528, 816, 1056
TasI AATT 6 cut(s) 263, 441, 471, 549, 556, 1070
TatI WGTACW 1 cut(s) 915
TauI GCSGC 3 cut(s) 8, 39, 1197
TfiI GAWTC 2 cut(s) 268, 332
Tru1I TTAA 9 cut(s) 87, 288, 474, 552, 567, 717, 837, 1158, 1303
Tru9I TTAA 9 cut(s) 87, 288, 474, 552, 567, 717, 837, 1158, 1303
TscAI CASTG 2 cut(s) 283, 325
TseFI GTSAC 1 cut(s) 1079
TseI GCWGC 2 cut(s) 59, 623
Tsp45I GTSAC 1 cut(s) 1079
TspDTI ATGAA 3 cut(s) 150, 188, 1053
TspRI CASTG 2 cut(s) 283, 325
Vha464I CTTAAG 1 cut(s) 86
VneI GTGCAC 1 cut(s) 725
XceI RCATGY 2 cut(s) 598, 944
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 527
XmnI GAANNNNTTC 2 cut(s) 14, 267
XspI CTAG 3 cut(s) 101, 183, 1293
Zsp2I ATGCAT 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.