Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0009818

Physical Location & Seq

Genomic Coordinates Forward (+)

14903026 .. 14904417

Gene Structure 1392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G160700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 336 bp

ATGCCCATCACTATAGCCGCCCACGACTGGACCAGCCCTGCGCCAGGTGTGATGCAAACAAGAGCAAAAGCCAAAACGAAACAGAGGAAGCTGGCCGCGAAGAACTTCAAGTACGTGATCCTCGGCGGTGGAGTCTCAGCTGGATATGCAGCTCGGGAGTTTGCCAAACAAGGGCTTAAGCCAGACGAACTAGCAGTCATTTCCAAAGAGGCGGTGGCTCCATACGAACGTCCTGCACTCAGCAAGGCTTATCTCTTCCCCGAGTCTCCTGCTAGACTTCCTGGGTTTCATGTTTGTGTTGGAAGTGGAGGAGAGAGATTGCTTCCCGAGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005829 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009056 GO:0009414 GO:0009415 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009725 GO:0009753 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0016020 GO:0016491 GO:0016651 GO:0016655 GO:0016656 GO:0016999 GO:0017001 GO:0017144 GO:0031090 GO:0031903 GO:0031967 GO:0031975 GO:0042221 GO:0042579 GO:0042737 GO:0042743 GO:0042744 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043903 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050789 GO:0050896 GO:0051186 GO:0051187 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0065007 GO:0070887 GO:0072593 GO:0097237 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Pyr_redox_2

Protein Analysis

112

Amino Acids

11.96

Weight (kDa)

9.76

Isoelectric Point (pI)

40.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52880 AT3G52880
fragaria_vesca	FvH4_6g18190
malus_domestica	MD12G1021900.v1.1 MD14G1018700.v1.1
prunus_persica	Prupe.6G160700_v2.0.a1 Prupe.7G114800_v2.0.a1
pyrus_communis	pycom12g02040 pycom14g01790
rosa_chinensis	RchiOBHm_Chr3g0472521
rosa_laevigata	RLG00000024073
rosa_multiflora	Rmu_sc0003510.1_g000032 Rmu_sc0011581.1_g000005
rosa_roxburghii	Rroxscaffold_6G00408860
rosa_rugosa	Rorug03G0126200
rosa_samantha	Rh3AG178100 Rh3BG204000 Rh3CG194400 Rh3CG201500 Rh3DG170800
rosa_wichuraiana	Rw3G016350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	98
AciI	CCGC	4 cut(s)	18, 96, 126, 212
AclWI	GGATC	1 cut(s)	112
AcoI	YGGCCR	1 cut(s)	93
AfaI	GTAC	1 cut(s)	113
AfiI	CCNNNNNNNGG	3 cut(s)	27, 44, 171
AflII	CTTAAG	1 cut(s)	176
AgsI	TTSAA	1 cut(s)	109
AjnI	CCWGG	2 cut(s)	43, 280
AluBI	AGCT	3 cut(s)	91, 140, 152
AluI	AGCT	3 cut(s)	91, 140, 152
Alw26I	GTCTC	2 cut(s)	139, 270
AlwI	GGATC	1 cut(s)	112
Ama87I	CYCGRG	3 cut(s)	153, 260, 326
AoxI	GGCC	1 cut(s)	93
ApeKI	GCWGC	1 cut(s)	149
ArsI	GACNNNNNNTTYG	2 cut(s)	180, 212
Asp700I	GAANNNNTTC	1 cut(s)	104
AspLEI	GCGC	1 cut(s)	43
AspS9I	GGNCC	1 cut(s)	30
AvaI	CYCGRG	3 cut(s)	153, 260, 326
AvaII	GGWCC	1 cut(s)	30
BbvI	GCAGC	1 cut(s)	161
BccI	CCATC	1 cut(s)	14
BcgI	CGANNNNNNTGC	4 cut(s)	215, 249, 251, 285
BciT130I	CCWGG	2 cut(s)	45, 282
BcoDI	GTCTC	2 cut(s)	139, 270
BfaI	CTAG	2 cut(s)	191, 273
BfmI	CTRYAG	1 cut(s)	12
BfrI	CTTAAG	1 cut(s)	176
BisI	GCNGC	3 cut(s)	18, 96, 150
BlsI	GCNGC	3 cut(s)	19, 97, 151
Bme1390I	CCNGG	2 cut(s)	45, 282
Bme18I	GGWCC	1 cut(s)	30
BmeT110I	CYCGRG	3 cut(s)	153, 260, 326
BmgT120I	GGNCC	1 cut(s)	30
BmiI	GGNNCC	1 cut(s)	219
BmrFI	CCNGG	2 cut(s)	45, 282
BmsI	GCATC	1 cut(s)	42
BsaAI	YACGTR	1 cut(s)	115
BsaJI	CCNNGG	2 cut(s)	121, 281
Bsc4I	CCNNNNNNNGG	3 cut(s)	27, 44, 171
Bse1I	ACTGG	1 cut(s)	32
BseBI	CCWGG	2 cut(s)	45, 282
BseDI	CCNNGG	2 cut(s)	121, 281
BseLI	CCNNNNNNNGG	3 cut(s)	27, 44, 171
BseMII	CTCAG	2 cut(s)	150, 253
BseNI	ACTGG	1 cut(s)	32
BseRI	GAGGAG	1 cut(s)	324
BseXI	GCAGC	1 cut(s)	161
BsgI	GTGCAG	1 cut(s)	219
Bsh1236I	CGCG	1 cut(s)	98
BshFI	GGCC	1 cut(s)	95
BsiHKCI	CYCGRG	3 cut(s)	153, 260, 326
BslI	CCNNNNNNNGG	3 cut(s)	27, 44, 171
BsmAI	GTCTC	2 cut(s)	139, 270
BsnI	GGCC	1 cut(s)	95
BsoBI	CYCGRG	3 cut(s)	153, 260, 326
Bsp143I	GATC	1 cut(s)	117
BspACI	CCGC	4 cut(s)	18, 96, 126, 212
BspANI	GGCC	1 cut(s)	95
BspCNI	CTCAG	2 cut(s)	149, 252
BspFNI	CGCG	1 cut(s)	98
BspLI	GGNNCC	1 cut(s)	219
BspPI	GGATC	1 cut(s)	112
BspTI	CTTAAG	1 cut(s)	176
BsrI	ACTGG	1 cut(s)	32
BssECI	CCNNGG	2 cut(s)	121, 281
BssMI	GATC	1 cut(s)	117
Bst2UI	CCWGG	2 cut(s)	45, 282
Bst6I	CTCTTC	1 cut(s)	260
BstAFI	CTTAAG	1 cut(s)	176
BstBAI	YACGTR	1 cut(s)	115
BstC8I	GCNNGC	1 cut(s)	93
BstDEI	CTNAG	2 cut(s)	136, 239
BstENI	CCTNNNNNAGG	1 cut(s)	42
BstFNI	CGCG	1 cut(s)	98
BstHHI	GCGC	1 cut(s)	43
BstKTI	GATC	1 cut(s)	120
BstMAI	GTCTC	2 cut(s)	139, 270
BstMBI	GATC	1 cut(s)	117
BstMWI	GCNNNNNNNGC	1 cut(s)	146
BstNI	CCWGG	2 cut(s)	45, 282
BstSCI	CCNGG	2 cut(s)	43, 280
BstSFI	CTRYAG	1 cut(s)	12
BstUI	CGCG	1 cut(s)	98
BstV1I	GCAGC	1 cut(s)	161
BsuRI	GGCC	1 cut(s)	95
Cac8I	GCNNGC	1 cut(s)	93
CfoI	GCGC	1 cut(s)	43
Cfr13I	GGNCC	1 cut(s)	30
Csp6I	GTAC	1 cut(s)	112
CviAII	CATG	1 cut(s)	290
CviQI	GTAC	1 cut(s)	112
DdeI	CTNAG	2 cut(s)	136, 239
DpnI	GATC	1 cut(s)	119
DpnII	GATC	1 cut(s)	117
EaeI	YGGCCR	1 cut(s)	93
Eam1104I	CTCTTC	1 cut(s)	260
EarI	CTCTTC	1 cut(s)	260
Eco47I	GGWCC	1 cut(s)	30
Eco88I	CYCGRG	3 cut(s)	153, 260, 326
EcoNI	CCTNNNNNAGG	1 cut(s)	42
EcoRII	CCWGG	2 cut(s)	43, 280
FaeI	CATG	1 cut(s)	293
FaiI	YATR	4 cut(s)	14, 147, 223, 291
FatI	CATG	1 cut(s)	289
Fnu4HI	GCNGC	3 cut(s)	18, 96, 150
Fsp4HI	GCNGC	3 cut(s)	18, 96, 150
FspBI	CTAG	2 cut(s)	191, 273
GlaI	GCGC	1 cut(s)	42
GluI	GCNGC	3 cut(s)	18, 96, 150
HaeIII	GGCC	1 cut(s)	95
HhaI	GCGC	1 cut(s)	43
Hin1II	CATG	1 cut(s)	293
Hin6I	GCGC	1 cut(s)	41
HinP1I	GCGC	1 cut(s)	41
HinfI	GANTC	2 cut(s)	132, 263
Hpy188III	TCNNGA	2 cut(s)	155, 326
HpyCH4IV	ACGT	2 cut(s)	114, 229
HpyCH4V	TGCA	3 cut(s)	55, 149, 236
HpyF10VI	GCNNNNNNNGC	1 cut(s)	146
HpyF3I	CTNAG	2 cut(s)	136, 239
HpySE526I	ACGT	2 cut(s)	114, 229
Hsp92II	CATG	1 cut(s)	293
HspAI	GCGC	1 cut(s)	41
Kzo9I	GATC	1 cut(s)	117
LmnI	GCTCC	1 cut(s)	223
Lsp1109I	GCAGC	1 cut(s)	161
LweI	GCATC	1 cut(s)	42
MaeI	CTAG	2 cut(s)	191, 273
MaeII	ACGT	2 cut(s)	114, 229
MalI	GATC	1 cut(s)	119
MboI	GATC	1 cut(s)	117
MboII	GAAGA	2 cut(s)	112, 247
MlyI	GAGTC	2 cut(s)	141, 272
MmeI	TCCRAC	1 cut(s)	280
MnlI	CCTC	4 cut(s)	78, 131, 202, 302
MroXI	GAANNNNTTC	1 cut(s)	104
MseI	TTAA	1 cut(s)	177
MslI	CAYNNNNRTG	1 cut(s)	294
MspA1I	CMGCKG	1 cut(s)	140
MspCI	CTTAAG	1 cut(s)	176
MspR9I	CCNGG	2 cut(s)	45, 282
MvaI	CCWGG	2 cut(s)	45, 282
MvnI	CGCG	1 cut(s)	98
MwoI	GCNNNNNNNGC	1 cut(s)	146
NdeII	GATC	1 cut(s)	117
NlaIII	CATG	1 cut(s)	293
NlaIV	GGNNCC	1 cut(s)	219
NmeAIII	GCCGAG	1 cut(s)	102
PdmI	GAANNNNTTC	1 cut(s)	104
PkrI	GCNGC	3 cut(s)	19, 97, 151
PleI	GAGTC	2 cut(s)	140, 271
PpsI	GAGTC	2 cut(s)	140, 271
Ppu21I	YACGTR	1 cut(s)	115
Psp6I	CCWGG	2 cut(s)	43, 280
PspGI	CCWGG	2 cut(s)	43, 280
PspN4I	GGNNCC	1 cut(s)	219
PspPI	GGNCC	1 cut(s)	30
PsrI	GAACNNNNNNTAC	2 cut(s)	95, 127
PvuII	CAGCTG	1 cut(s)	140
RsaI	GTAC	1 cut(s)	113
RsaNI	GTAC	1 cut(s)	112
RseI	CAYNNNNRTG	1 cut(s)	294
SaqAI	TTAA	1 cut(s)	177
SatI	GCNGC	3 cut(s)	18, 96, 150
Sau3AI	GATC	1 cut(s)	117
Sau96I	GGNCC	1 cut(s)	30
SchI	GAGTC	2 cut(s)	141, 272
ScrFI	CCNGG	2 cut(s)	45, 282
SetI	ASST	6 cut(s)	49, 93, 117, 142, 154, 232
SfaNI	GCATC	1 cut(s)	42
SfcI	CTRYAG	1 cut(s)	12
SinI	GGWCC	1 cut(s)	30
SmiMI	CAYNNNNRTG	1 cut(s)	294
SmlI	CTYRAG	1 cut(s)	176
SmoI	CTYRAG	1 cut(s)	176
SsiI	CCGC	4 cut(s)	18, 96, 126, 212
SspMI	CTAG	2 cut(s)	191, 273
StyD4I	CCNGG	2 cut(s)	43, 280
TaiI	ACGT	2 cut(s)	117, 232
TauI	GCSGC	2 cut(s)	20, 98
Tru1I	TTAA	1 cut(s)	177
Tru9I	TTAA	1 cut(s)	177
TseI	GCWGC	1 cut(s)	149
TspDTI	ATGAA	1 cut(s)	278
Vha464I	CTTAAG	1 cut(s)	176
VpaK11BI	GGWCC	1 cut(s)	30
XagI	CCTNNNNNAGG	1 cut(s)	42
XcmI	CCANNNNNNNNNTGG	1 cut(s)	211
XmnI	GAANNNNTTC	1 cut(s)	104
XspI	CTAG	2 cut(s)	191, 273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.