MD12G1087600.v1.1

Belongs to the helicase family. Dicer subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
10770415 .. 10775754
5340 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1087600.v1.1.491

Sequence Viewer

Length: 2682 bp
ATGGTTAAGAAAATTTGGTGTTCCAAGCATTTTGTAATCCTTATAGGCGGACCCATAAATCATTTTCTTATTGTTTTCCTCCCAAAAGAACTTGGTGGGCGGTTTTGTTTTCATCTCTCTTTTTCTTTATCACTGACTTTATACGAACTTACAGAGGAATGTCTTTTGAAATTCCAAAGAAACCCAGTTAGGCTTTTGCTGCTTCAAACTCCATCGAGTTTTTTAAAGACACACTTTACTCTCTGTTACTCTCTTACATTTATTTACCTACAGTTCTCGAATTCTCTGAGCTTCCGCTTTCACTCTTGCTCCCTGCTGCGTCTGCATCGATCAGTTTCTAGAGAAGCTAACATGGATAAAGACGAAATCCGGAATAAATCTGCTGATCCTCTTGGGGTGGAAGAAGCCAAACAAGAACTTGGGCGTGAACCTTCTGATGATGAACAACCCCGTTATGTCCCAATCGAGCTGGTCAAACCTCCGTGTTCAAATGATGCTAGTGTAATGTATCATTGCTACTTAATTGAGCTGAAACCGAATTTTGATTGCGATATTCCAGTTAGCGATATCGTACTTGGCATGAGAAATGAACTTGATTGTGATACTATTGCAAATATGAATTTTGAATTACAAGTTCAAAGGGGTCCTTTAACAGTAAACTTTAAACATGCTGGAGATGTTAGTCTAAGTTCAGAGCAGGTTCTTGCGTGCAGAAGGTTCCAAATCACAATTTTTAAGATTCTAGTGGATCACAAATTGAAAAAGTTGGAAGAAGTTTTAGAAAGATTTTGTTTGGGACAAAACCATTGGACTGAATCAATTGATTACCTTTTGCTACCGGCAGAAAGGAGGATACACCAGAGATCATCAATCATTGATTTGGAAAGCATTATGTCTATGTCGTCTCTCTGTAACAATGATTCTAAGAATAGTGCTTGTGTAAATTTTCCTCAACCGAACAACAATTCCCATGTTCTGCTACATACCCAAAATGGCATGGTTTGTACTTGCAGGATCCAGAATTCTGTGGTCTATACGCCTCATAACAGTATCCTGTATTGCATCACTGGTCTGTTGGATGACTTGAATGGAAACTCACTGATGAAGGACAACAAATCTCTTACCTACAAAGCCCACTATGAAGCAAAGCATGGGATCAACTTGTGTTTCGATCAACAGTTATTGTTGAATGGGAGACACATTTTTCGGGTACAAAATTATCTTCTGAAGTGCCGACAACAGACCAAAAAAGAATCAAGTGATAAATCTGTTGAATTGCCACCTGAACTTTGCGCTATAATCATGTCACCTATATCAACCAGCAATTTACATTCATTCTCACTTGTTCCGTCCATCTTGCATCGGCTTGAGTCTTTACTACTCGCTGTCAACTTGAAACACATGATTTTGGATCATTGCCCGCAAAATATTACTATCCCAACCATCAAGGTCCTGGAATCTATTACCACAAAAGGTTGCCAAGAGAACTACGATTTGGAATCCTTGGAAACTCTTGGAGATTCCTTTCTTAAGTATGCTGCAAGTCAGCAGCTTTTTAAAACCTATCAAAATGATCGTGAGGGCCTCCTTAGCGTAAATAAGGAACAAATAATTTCTAATCTTTCCCTTGGCAAGCTTGGATGTGACCGTAAAATTTCGGGTTTTATTCGTGAGGAGAGTTTTGATCCGAAAAAGTGGATTATACCTGGAGATTATTCTGGAAATTATTTCTTAAATGAGGAGTTGCTTTTTAATAAAAGAAGCATTTACGTTGGGGGAACAAGGAAGATCGATACTAAAGTTGTTGGAGATGTAGTTGAGGCACTAATCGGTGCATTTCTTAGCACAGGTGGTGAACTAGATGCCATATATTTCATGAACTGGGTTGGTATAGAGGTGGATTTAGACCACATACGATATGAGAGGCACTTACCAGTGCAGCCGGAGAAGCTCATTGATGTCGGACATTTAGAGTCATTGCTTGGCTACAAATTTTGTGATCCTTCTCTTCTCGTGGAAGCACTAAGCCATGGTTCTTACATGCCAGGAGGTTACCAGCGGCTAGAATTTCTTGGTGATGCGGTGTTGGATTATATGATCACTACTTATTTTTACTATAAGTATCCTGGGATGATGTCGCCGGGATTTTTAACTGATATGAGGTCTGCTTCTGTGAACAACGATTGTTATGCACGATCTGCTGTGAAGGCTGGATTGCACGAGCACATTCTTGCTTCGGACATAGTCCACCGAAATATTGACTCTACTGTTAACAATTTTGGATTGCTTTCTACGGAATCAACTTTTGGATTTGAATCTGAGACATCCTTCACAAGTGTACTTGCGGATATTGTTGAGGCTTTAGCAGGAGCAATTTTTATTGATTCTGGATACGATAAACAAATTGTCTTTCAGAGTATACGTCGTCTCTTAGAGCCCTTGGTTTCTCCAGAAACGTTGAGGCTCCATCCTGGAAGAGATTTCAATGATTATTGCCAAAAAAAGCATTATAATGTGCAGAAACTCGTCGAGTGCTTCCAAAATGGTGAGGCTATGGTTACAATAGAGGTTGAAGCGGAAGGGGTCACATACAAGCATACATCAACTGCTTCTAATAAGATAACTGCACGTAAATTAGCTCAAAAACAAGTTTTGAGGTCTCTGAAGGAAAATGGTCTCTGA

Protein Analysis

894

Amino Acids

101.44

Weight (kDa)

6.19

Isoelectric Point (pI)

44.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAZ PF02170 332 - 453 7.4e-10 PAZ domain
Ribonuclease_3 PF00636 500 - 617 2.2e-16 Ribonuclease III domain
Ribonucleas_3_3 PF14622 667 - 800 4.5e-14 Ribonuclease-III-like
Ribonuclease_3 PF00636 686 - 797 5.2e-20 Ribonuclease III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2511
Acc36I ACCTGC 1 cut(s) 688
AccI GTMKAC 1 cut(s) 2419
AccIII TCCGGA 1 cut(s) 369
AciI CCGC 8 cut(s) 48, 100, 295, 1421, 2059, 2081, 2345, 2576
AclI AACGTT 1 cut(s) 2456
AclWI GGATC 8 cut(s) 380, 756, 1009, 1022, 1163, 1419, 1679, 1994
AcuI CTGAAG 1 cut(s) 1247
AfaI GTAC 4 cut(s) 573, 1006, 1212, 2340
AflII CTTAAG 1 cut(s) 1529
AjnI CCWGG 5 cut(s) 1452, 1705, 2044, 2125, 2470
AjuI GAANNNNNNNTTGG 4 cut(s) 1478, 1510, 2289, 2321
AloI GAACNNNNNNTCC 2 cut(s) 950, 982
AluBI AGCT 8 cut(s) 291, 347, 469, 529, 1552, 1636, 1951, 2639
AluI AGCT 8 cut(s) 291, 347, 469, 529, 1552, 1636, 1951, 2639
Alw21I GWGCWC 1 cut(s) 2226
Alw26I GTCTC 5 cut(s) 909, 1189, 2315, 2432, 2664
AlwI GGATC 8 cut(s) 380, 756, 1009, 1022, 1163, 1419, 1679, 1994
Aor13HI TCCGGA 1 cut(s) 369
AoxI GGCC 1 cut(s) 1582
ApeKI GCWGC 5 cut(s) 199, 316, 1538, 1549, 1939
ArsI GACNNNNNNTTYG 2 cut(s) 1188, 1220
AspLEI GCGC 1 cut(s) 1295
AspS9I GGNCC 4 cut(s) 50, 644, 1450, 1582
AsuC2I CCSGG 1 cut(s) 2142
AsuHPI GGTGA 4 cut(s) 1299, 1865, 2087, 2558
AvaII GGWCC 3 cut(s) 50, 644, 1450
BaeI ACNNNNGTAYC 2 cut(s) 1785, 1818
BamHI GGATCC 1 cut(s) 1014
BanII GRGCYC 1 cut(s) 2439
BauI CACGAG 2 cut(s) 2012, 2219
Bbv12I GWGCWC 1 cut(s) 2226
BbvI GCAGC 5 cut(s) 186, 303, 1525, 1561, 1951
BccI CCATC 4 cut(s) 220, 1361, 1451, 2475
BcgI CGANNNNNNTGC 2 cut(s) 2171, 2205
BciT130I CCWGG 5 cut(s) 1454, 1707, 2046, 2127, 2472
BciVI GTATCC 4 cut(s) 846, 1061, 2133, 2384
BclI TGATCA 1 cut(s) 2097
BcnI CCSGG 1 cut(s) 2142
BcoDI GTCTC 5 cut(s) 909, 1189, 2315, 2432, 2664
BfaI CTAG 5 cut(s) 339, 498, 743, 1859, 2063
BfmI CTRYAG 1 cut(s) 269
BfrI CTTAAG 1 cut(s) 1529
BfuAI ACCTGC 1 cut(s) 688
BfuI GTATCC 4 cut(s) 846, 1061, 2133, 2384
BisI GCNGC 6 cut(s) 200, 317, 1539, 1550, 1940, 2060
BlsI GCNGC 6 cut(s) 201, 318, 1540, 1551, 1941, 2061
Bme1390I CCNGG 6 cut(s) 1454, 1707, 2046, 2127, 2142, 2472
Bme18I GGWCC 3 cut(s) 50, 644, 1450
BmgT120I GGNCC 4 cut(s) 50, 644, 1450, 1582
BmiI GGNNCC 5 cut(s) 52, 645, 719, 1016, 2465
BmrFI CCNGG 6 cut(s) 1454, 1707, 2046, 2127, 2142, 2472
BmrI ACTGGG 2 cut(s) 179, 1891
BmsI GCATC 6 cut(s) 334, 484, 1071, 1369, 1852, 2068
BmuI ACTGGG 2 cut(s) 179, 1891
BpmI CTGGAG 3 cut(s) 693, 1728, 2433
Bpu10I CCTNAGC 1 cut(s) 1589
BpuEI CTTGAG 1 cut(s) 1388
BpuMI CCSGG 1 cut(s) 2142
Bsa29I ATCGAT 2 cut(s) 328, 1791
BsaAI YACGTR 1 cut(s) 2630
BsaBI GATNNNNATC 1 cut(s) 2314
BsaI GGTCTC 1 cut(s) 2664
BsaJI CCNNGG 5 cut(s) 1503, 1627, 2029, 2126, 2439
BsaWI WCCGGW 1 cut(s) 369
BsaXI ACNNNNNCTCC 4 cut(s) 293, 323, 1800, 1830
Bse118I RCCGGY 1 cut(s) 838
Bse1I ACTGG 5 cut(s) 185, 557, 1072, 1886, 1934
Bse3DI GCAATG 3 cut(s) 511, 1414, 1976
Bse8I GATNNNNATC 1 cut(s) 2314
BseAI TCCGGA 1 cut(s) 369
BseBI CCWGG 5 cut(s) 1454, 1707, 2046, 2127, 2472
BseCI ATCGAT 2 cut(s) 328, 1791
BseDI CCNNGG 5 cut(s) 1503, 1627, 2029, 2126, 2439
BseGI GGATG 5 cut(s) 1084, 1646, 2136, 2324, 2467
BseJI GATNNNNATC 1 cut(s) 2314
BseMI GCAATG 3 cut(s) 511, 1414, 1976
BseMII CTCAG 2 cut(s) 278, 2310
BseNI ACTGG 5 cut(s) 185, 557, 1072, 1886, 1934
BseRI GAGGAG 2 cut(s) 1688, 1754
BseXI GCAGC 5 cut(s) 186, 303, 1525, 1561, 1951
BsgI GTGCAG 4 cut(s) 730, 1958, 2537, 2610
BshFI GGCC 1 cut(s) 1584
BshVI ATCGAT 2 cut(s) 328, 1791
BsiHKAI GWGCWC 1 cut(s) 2226
BsiSI CCGG 4 cut(s) 370, 839, 1943, 2141
BslFI GGGAC 2 cut(s) 443, 810
BsmAI GTCTC 5 cut(s) 909, 1189, 2315, 2432, 2664
BsmBI CGTCTC 2 cut(s) 909, 2432
BsmFI GGGAC 2 cut(s) 443, 810
BsnI GGCC 1 cut(s) 1584
Bso31I GGTCTC 1 cut(s) 2664
Bsp1286I GDGCHC 2 cut(s) 2226, 2439
Bsp13I TCCGGA 1 cut(s) 369
Bsp19I CCATGG 1 cut(s) 2029
BspACI CCGC 8 cut(s) 48, 100, 295, 1421, 2059, 2081, 2345, 2576
BspANI GGCC 1 cut(s) 1584
BspCNI CTCAG 2 cut(s) 279, 2311
BspDI ATCGAT 2 cut(s) 328, 1791
BspEI TCCGGA 1 cut(s) 369
BspHI TCATGA 1 cut(s) 1875
BspLI GGNNCC 5 cut(s) 52, 645, 719, 1016, 2465
BspMI ACCTGC 1 cut(s) 688
BspPI GGATC 8 cut(s) 380, 756, 1009, 1022, 1163, 1419, 1679, 1994
BspTI CTTAAG 1 cut(s) 1529
BspTNI GGTCTC 1 cut(s) 2664
BsrDI GCAATG 3 cut(s) 511, 1414, 1976
BsrFI RCCGGY 1 cut(s) 838
BsrI ACTGG 5 cut(s) 185, 557, 1072, 1886, 1934
BssAI RCCGGY 1 cut(s) 838
BssECI CCNNGG 5 cut(s) 1503, 1627, 2029, 2126, 2439
BssNAI GTATAC 1 cut(s) 2420
BssSI CACGAG 2 cut(s) 2012, 2219
BssT1I CCWWGG 4 cut(s) 1503, 1627, 2029, 2439
Bst1107I GTATAC 1 cut(s) 2420
Bst2BI CACGAG 2 cut(s) 2012, 2219
Bst2UI CCWGG 5 cut(s) 1454, 1707, 2046, 2127, 2472
Bst4CI ACNGT 6 cut(s) 273, 655, 1049, 1179, 1649, 2269
Bst6I CTCTTC 2 cut(s) 2013, 2470
BstAFI CTTAAG 1 cut(s) 1529
BstAPI GCANNNNNTGC 1 cut(s) 2198
BstBAI YACGTR 1 cut(s) 2630
BstC8I GCNNGC 3 cut(s) 709, 1421, 1634
BstDEI CTNAG 8 cut(s) 287, 686, 924, 1589, 1841, 2024, 2319, 2431
BstDSI CCRYGG 1 cut(s) 2029
BstEII GGTNACC 1 cut(s) 2051
BstF5I GGATG 5 cut(s) 1084, 1646, 2136, 2324, 2467
BstHHI GCGC 1 cut(s) 1295
BstMAI GTCTC 5 cut(s) 909, 1189, 2315, 2432, 2664
BstMWI GCNNNNNNNGC 6 cut(s) 199, 322, 1590, 1948, 2198, 2207
BstNI CCWGG 5 cut(s) 1454, 1707, 2046, 2127, 2472
BstNSI RCATGY 2 cut(s) 671, 2044
BstPI GGTNACC 1 cut(s) 2051
BstSCI CCNGG 6 cut(s) 1452, 1705, 2044, 2125, 2140, 2470
BstSFI CTRYAG 1 cut(s) 269
BstV1I GCAGC 5 cut(s) 186, 303, 1525, 1561, 1951
BstX2I RGATCY 1 cut(s) 1014
BstYI RGATCY 1 cut(s) 1014
BstZ17I GTATAC 1 cut(s) 2420
Bsu15I ATCGAT 2 cut(s) 328, 1791
BsuI GTATCC 4 cut(s) 846, 1061, 2133, 2384
BsuRI GGCC 1 cut(s) 1584
BsuTUI ATCGAT 2 cut(s) 328, 1791
BtgI CCRYGG 1 cut(s) 2029
BtsCI GGATG 5 cut(s) 1084, 1646, 2136, 2324, 2467
BtsIMutI CAGTG 4 cut(s) 131, 1065, 1097, 1941
BveI ACCTGC 1 cut(s) 688
Cac8I GCNNGC 3 cut(s) 709, 1421, 1634
CciI TCATGA 1 cut(s) 1875
CfoI GCGC 1 cut(s) 1295
Cfr10I RCCGGY 1 cut(s) 838
Cfr13I GGNCC 4 cut(s) 50, 644, 1450, 1582
ClaI ATCGAT 2 cut(s) 328, 1791
CseI GACGC 1 cut(s) 308
Csp6I GTAC 4 cut(s) 572, 1005, 1211, 2339
CviQI GTAC 4 cut(s) 572, 1005, 1211, 2339
DdeI CTNAG 8 cut(s) 287, 686, 924, 1589, 1841, 2024, 2319, 2431
DraI TTTAAA 3 cut(s) 225, 664, 1558
Eam1104I CTCTTC 2 cut(s) 2013, 2470
EarI CTCTTC 2 cut(s) 2013, 2470
EciI GGCGGA 1 cut(s) 63
Eco130I CCWWGG 4 cut(s) 1503, 1627, 2029, 2439
Eco24I GRGCYC 1 cut(s) 2439
Eco31I GGTCTC 1 cut(s) 2664
Eco32I GATATC 1 cut(s) 568
Eco47I GGWCC 3 cut(s) 50, 644, 1450
Eco57I CTGAAG 1 cut(s) 1247
Eco91I GGTNACC 1 cut(s) 2051
EcoO109I RGGNCCY 3 cut(s) 644, 1450, 1582
EcoO65I GGTNACC 1 cut(s) 2051
EcoRI GAATTC 2 cut(s) 280, 1021
EcoRII CCWGG 5 cut(s) 1452, 1705, 2044, 2125, 2470
EcoRV GATATC 1 cut(s) 568
EcoT14I CCWWGG 4 cut(s) 1503, 1627, 2029, 2439
EcoT38I GRGCYC 1 cut(s) 2439
ErhI CCWWGG 4 cut(s) 1503, 1627, 2029, 2439
Esp3I CGTCTC 2 cut(s) 909, 2432
FalI AAGNNNNNCTT 4 cut(s) 218, 250, 631, 663
FaqI GGGAC 2 cut(s) 443, 810
FauI CCCGC 1 cut(s) 1428
FbaI TGATCA 1 cut(s) 2097
FblI GTMKAC 1 cut(s) 2419
Fnu4HI GCNGC 6 cut(s) 200, 317, 1539, 1550, 1940, 2060
FokI GGATG 5 cut(s) 1091, 1653, 2143, 2311, 2454
FriOI GRGCYC 1 cut(s) 2439
Fsp4HI GCNGC 6 cut(s) 200, 317, 1539, 1550, 1940, 2060
FspBI CTAG 5 cut(s) 339, 498, 743, 1859, 2063
GlaI GCGC 1 cut(s) 1294
GluI GCNGC 6 cut(s) 200, 317, 1539, 1550, 1940, 2060
GsuI CTGGAG 3 cut(s) 693, 1728, 2433
HaeIII GGCC 1 cut(s) 1584
HapII CCGG 4 cut(s) 370, 839, 1943, 2141
HgaI GACGC 1 cut(s) 308
HhaI GCGC 1 cut(s) 1295
Hin6I GCGC 1 cut(s) 1293
HinP1I GCGC 1 cut(s) 1293
HincII GTYRAC 2 cut(s) 1390, 2272
HindII GTYRAC 2 cut(s) 1390, 2272
HindIII AAGCTT 1 cut(s) 1634
HpaI GTTAAC 1 cut(s) 2272
HpaII CCGG 4 cut(s) 370, 839, 1943, 2141
HphI GGTGA 4 cut(s) 1299, 1865, 2087, 2558
Hpy166II GTNNAC 9 cut(s) 428, 658, 1390, 1856, 2176, 2248, 2272, 2339, 2420
Hpy8I GTNNAC 9 cut(s) 428, 658, 1390, 1856, 2176, 2248, 2272, 2339, 2420
Hpy99I CGWCG 2 cut(s) 2427, 2531
HpyAV CCTTC 8 cut(s) 441, 708, 1099, 2013, 2200, 2338, 2573, 2659
HpyCH4III ACNGT 6 cut(s) 273, 655, 1049, 1179, 1649, 2269
HpyCH4IV ACGT 4 cut(s) 1770, 2422, 2456, 2629
HpyF10VI GCNNNNNNNGC 6 cut(s) 199, 322, 1590, 1948, 2198, 2207
HpyF3I CTNAG 8 cut(s) 287, 686, 924, 1589, 1841, 2024, 2319, 2431
HpySE526I ACGT 4 cut(s) 1770, 2422, 2456, 2629
HspAI GCGC 1 cut(s) 1293
Kpn2I TCCGGA 1 cut(s) 369
Ksp22I TGATCA 1 cut(s) 2097
KspAI GTTAAC 1 cut(s) 2272
LmnI GCTCC 3 cut(s) 314, 2369, 2469
Lsp1109I GCAGC 5 cut(s) 186, 303, 1525, 1561, 1951
LweI GCATC 6 cut(s) 334, 484, 1071, 1369, 1852, 2068
MaeI CTAG 5 cut(s) 339, 498, 743, 1859, 2063
MaeII ACGT 4 cut(s) 1770, 2422, 2456, 2629
MaeIII GTNAC 7 cut(s) 245, 911, 1305, 1643, 2051, 2557, 2584
MboII GAAGA 6 cut(s) 413, 782, 1214, 1798, 2000, 2487
MfeI CAATTG 1 cut(s) 819
MflI RGATCY 1 cut(s) 1014
MhlI GDGCHC 2 cut(s) 2226, 2439
MlyI GAGTC 3 cut(s) 1379, 1982, 2255
MmeI TCCRAC 5 cut(s) 747, 1056, 1786, 1942, 2067
MroI TCCGGA 1 cut(s) 369
MslI CAYNNNNRTG 1 cut(s) 2511
MspA1I CMGCKG 1 cut(s) 2059
MspCI CTTAAG 1 cut(s) 1529
MspI CCGG 4 cut(s) 370, 839, 1943, 2141
MspR9I CCNGG 6 cut(s) 1454, 1707, 2046, 2127, 2142, 2472
MunI CAATTG 1 cut(s) 819
MvaI CCWGG 5 cut(s) 1454, 1707, 2046, 2127, 2472
MwoI GCNNNNNNNGC 6 cut(s) 199, 322, 1590, 1948, 2198, 2207
NciI CCSGG 1 cut(s) 2142
NcoI CCATGG 1 cut(s) 2029
NlaIV GGNNCC 5 cut(s) 52, 645, 719, 1016, 2465
NmuCI GTSAC 3 cut(s) 1305, 1643, 2584
NspI RCATGY 2 cut(s) 671, 2044
PagI TCATGA 1 cut(s) 1875
PflFI GACNNNGTC 1 cut(s) 2243
PfoI TCCNGGA 2 cut(s) 1452, 2470
PkrI GCNGC 6 cut(s) 201, 318, 1540, 1551, 1941, 2061
PleI GAGTC 3 cut(s) 1378, 1981, 2255
PpsI GAGTC 3 cut(s) 1378, 1981, 2255
Ppu21I YACGTR 1 cut(s) 2630
PpuMI RGGWCCY 2 cut(s) 644, 1450
PsiI TTATAA 1 cut(s) 2511
Psp1406I AACGTT 1 cut(s) 2456
Psp5II RGGWCCY 2 cut(s) 644, 1450
Psp6I CCWGG 5 cut(s) 1452, 1705, 2044, 2125, 2470
PspEI GGTNACC 1 cut(s) 2051
PspGI CCWGG 5 cut(s) 1452, 1705, 2044, 2125, 2470
PspN4I GGNNCC 5 cut(s) 52, 645, 719, 1016, 2465
PspPI GGNCC 4 cut(s) 50, 644, 1450, 1582
PspPPI RGGWCCY 2 cut(s) 644, 1450
PsuI RGATCY 1 cut(s) 1014
PsyI GACNNNGTC 1 cut(s) 2243
RsaI GTAC 4 cut(s) 573, 1006, 1212, 2340
RsaNI GTAC 4 cut(s) 572, 1005, 1211, 2339
RseI CAYNNNNRTG 1 cut(s) 2511
SatI GCNGC 6 cut(s) 200, 317, 1539, 1550, 1940, 2060
Sau96I GGNCC 4 cut(s) 50, 644, 1450, 1582
SchI GAGTC 3 cut(s) 1379, 1982, 2255
ScrFI CCNGG 6 cut(s) 1454, 1707, 2046, 2127, 2142, 2472
SduI GDGCHC 2 cut(s) 2226, 2439
SfaNI GCATC 6 cut(s) 334, 484, 1071, 1369, 1852, 2068
SfcI CTRYAG 1 cut(s) 269
SinI GGWCC 3 cut(s) 50, 644, 1450
SmiMI CAYNNNNRTG 1 cut(s) 2511
SmlI CTYRAG 2 cut(s) 1367, 1529
SmoI CTYRAG 2 cut(s) 1367, 1529
SsiI CCGC 8 cut(s) 48, 100, 295, 1421, 2059, 2081, 2345, 2576
SspI AATATT 2 cut(s) 1429, 2257
SspMI CTAG 5 cut(s) 339, 498, 743, 1859, 2063
StyD4I CCNGG 6 cut(s) 1452, 1705, 2044, 2125, 2140, 2470
StyI CCWWGG 4 cut(s) 1503, 1627, 2029, 2439
TaaI ACNGT 6 cut(s) 273, 655, 1049, 1179, 1649, 2269
TaiI ACGT 4 cut(s) 1773, 2425, 2459, 2632
TaqI TCGA 7 cut(s) 215, 278, 328, 465, 1170, 1791, 2529
TatI WGTACW 2 cut(s) 1004, 2338
TauI GCSGC 1 cut(s) 2062
TscAI CASTG 4 cut(s) 138, 1072, 1104, 1941
TseFI GTSAC 3 cut(s) 1305, 1643, 2584
TseI GCWGC 5 cut(s) 199, 316, 1538, 1549, 1939
Tsp45I GTSAC 3 cut(s) 1305, 1643, 2584
TspDTI ATGAA 9 cut(s) 101, 456, 603, 632, 1118, 1155, 1323, 1864, 1892
TspGWI ACGGA 3 cut(s) 471, 1338, 2309
TspRI CASTG 4 cut(s) 138, 1072, 1104, 1941
Tth111I GACNNNGTC 1 cut(s) 2243
Vha464I CTTAAG 1 cut(s) 1529
VpaK11BI GGWCC 3 cut(s) 50, 644, 1450
XbaI TCTAGA 1 cut(s) 338
XceI RCATGY 2 cut(s) 671, 2044
XcmI CCANNNNNNNNNTGG 1 cut(s) 1450
XmiI GTMKAC 1 cut(s) 2419
XspI CTAG 5 cut(s) 339, 498, 743, 1859, 2063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.