Belongs to the helicase family. Dicer subfamily
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ResIII | PF04851 | 25 - 193 | 2e-14 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 26 - 193 | 3.6e-16 | DEAD/DEAH box helicase |
| Helicase_C | PF00271 | 360 - 478 | 2.2e-16 | Helicase conserved C-terminal domain |
| Dicer_dimer | PF03368 | 549 - 623 | 6.1e-12 | Dicer dimerisation domain |
| PAZ | PF02170 | 812 - 939 | 1.5e-12 | PAZ domain |
| Ribonuclease_3 | PF00636 | 983 - 1100 | 1.8e-18 | Ribonuclease III domain |
| Ribonucleas_3_3 | PF14622 | 1150 - 1287 | 4.4e-16 | Ribonuclease-III-like |
| Ribonuclease_3 | PF00636 | 1173 - 1284 | 8.6e-23 | Ribonuclease III domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2164 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1639 |
| Acc36I | ACCTGC | 3 cut(s) | 1711, 2164, 2459 |
| AccI | GTMKAC | 1 cut(s) | 770 |
| AccIII | TCCGGA | 1 cut(s) | 2460 |
| AciI | CCGC | 4 cut(s) | 696, 1729, 2682, 3520 |
| AcuI | CTGAAG | 2 cut(s) | 282, 1817 |
| AcvI | CACGTG | 2 cut(s) | 2375, 2659 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1688, 2489, 3081, 3082, 3463 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1219, 3619 |
| AjnI | CCWGG | 7 cut(s) | 1635, 1673, 2305, 2814, 3154, 3505, 3598 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2922, 2954, 3750, 3782 |
| AleI | CACNNNNGTG | 2 cut(s) | 122, 2360 |
| Alw26I | GTCTC | 8 cut(s) | 128, 629, 1094, 2145, 2320, 3153, 3776, 3825 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4073 |
| Aor13HI | TCCGGA | 1 cut(s) | 2460 |
| AoxI | GGCC | 3 cut(s) | 1117, 1426, 3031 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 763, 795 |
| AseI | ATTAAT | 1 cut(s) | 1460 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 1002, 1197, 1296, 2937, 3033, 3061, 3995 |
| AspLEI | GCGC | 1 cut(s) | 114 |
| AspS9I | GGNCC | 4 cut(s) | 1117, 1725, 2310, 4119 |
| AsuC2I | CCSGG | 2 cut(s) | 3083, 3108 |
| AsuHPI | GGTGA | 8 cut(s) | 470, 962, 1324, 2748, 2804, 3314, 3588, 3643 |
| AsuII | TTCGAA | 1 cut(s) | 3959 |
| AsuNHI | GCTAGC | 1 cut(s) | 2990 |
| AvaII | GGWCC | 3 cut(s) | 1725, 2310, 4119 |
| BanII | GRGCYC | 2 cut(s) | 2607, 3900 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1211, 1243 |
| BbrPI | CACGTG | 2 cut(s) | 2375, 2659 |
| BbsI | GAAGAC | 5 cut(s) | 214, 995, 1635, 2650, 4088 |
| BceAI | ACGGC | 2 cut(s) | 1413, 2612 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 256, 290 |
| BciT130I | CCWGG | 7 cut(s) | 1637, 1675, 2307, 2816, 3156, 3507, 3600 |
| BclI | TGATCA | 2 cut(s) | 447, 3558 |
| BcnI | CCSGG | 2 cut(s) | 3083, 3108 |
| BcoDI | GTCTC | 8 cut(s) | 128, 629, 1094, 2145, 2320, 3153, 3776, 3825 |
| BfmI | CTRYAG | 5 cut(s) | 1564, 1603, 2185, 2546, 3753 |
| BfuAI | ACCTGC | 3 cut(s) | 1711, 2164, 2459 |
| BmcAI | AGTACT | 1 cut(s) | 2585 |
| Bme1390I | CCNGG | 9 cut(s) | 1637, 1675, 2307, 2816, 3083, 3108, 3156, 3507, 3600 |
| Bme18I | GGWCC | 3 cut(s) | 1725, 2310, 4119 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1219, 3619 |
| BmgT120I | GGNCC | 4 cut(s) | 1117, 1725, 2310, 4119 |
| BmiI | GGNNCC | 9 cut(s) | 12, 40, 231, 1118, 1679, 1726, 1727, 2311, 3390 |
| BmrFI | CCNGG | 9 cut(s) | 1637, 1675, 2307, 2816, 3083, 3108, 3156, 3507, 3600 |
| BmrI | ACTGGG | 1 cut(s) | 3377 |
| BmtI | GCTAGC | 1 cut(s) | 2994 |
| BmuI | ACTGGG | 1 cut(s) | 3377 |
| BpiI | GAAGAC | 5 cut(s) | 214, 995, 1635, 2650, 4088 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 125, 157 |
| BpmI | CTGGAG | 7 cut(s) | 1641, 1657, 1658, 2169, 2837, 3177, 3894 |
| Bpu14I | TTCGAA | 1 cut(s) | 3959 |
| BpuEI | CTTGAG | 3 cut(s) | 653, 2120, 4135 |
| BpuMI | CCSGG | 2 cut(s) | 3083, 3108 |
| Bsa29I | ATCGAT | 2 cut(s) | 1334, 1581 |
| BsaAI | YACGTR | 2 cut(s) | 2375, 2659 |
| BsaI | GGTCTC | 2 cut(s) | 128, 2320 |
| BsaJI | CCNNGG | 8 cut(s) | 1635, 1709, 2305, 2306, 2469, 3505, 3795, 3900 |
| BsaWI | WCCGGW | 1 cut(s) | 2460 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 655, 685, 1379, 1409, 3690, 3720, 3798, 3828 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1688, 2489, 3081, 3082, 3463 |
| Bse118I | RCCGGY | 1 cut(s) | 137 |
| Bse3DI | GCAATG | 3 cut(s) | 318, 1057, 1230 |
| BseAI | TCCGGA | 1 cut(s) | 2460 |
| BseBI | CCWGG | 7 cut(s) | 1637, 1675, 2307, 2816, 3156, 3507, 3600 |
| BseCI | ATCGAT | 2 cut(s) | 1334, 1581 |
| BseDI | CCNNGG | 8 cut(s) | 1635, 1709, 2305, 2306, 2469, 3505, 3795, 3900 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1688, 2489, 3081, 3082, 3463 |
| BseMI | GCAATG | 3 cut(s) | 318, 1057, 1230 |
| BseMII | CTCAG | 5 cut(s) | 398, 531, 2782, 3489, 3771 |
| BseRI | GAGGAG | 3 cut(s) | 1937, 2077, 2537 |
| BseYI | CCCAGC | 1 cut(s) | 3771 |
| BshFI | GGCC | 3 cut(s) | 1119, 1428, 3033 |
| BshVI | ATCGAT | 2 cut(s) | 1334, 1581 |
| BsiSI | CCGG | 4 cut(s) | 138, 2461, 3082, 3107 |
| BslFI | GGGAC | 5 cut(s) | 518, 1525, 1738, 1925, 2323 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1688, 2489, 3081, 3082, 3463 |
| BsmAI | GTCTC | 8 cut(s) | 128, 629, 1094, 2145, 2320, 3153, 3776, 3825 |
| BsmBI | CGTCTC | 1 cut(s) | 1094 |
| BsmFI | GGGAC | 5 cut(s) | 518, 1525, 1738, 1925, 2323 |
| BsmI | GAATGC | 2 cut(s) | 464, 698 |
| BsnI | GGCC | 3 cut(s) | 1119, 1428, 3033 |
| Bso31I | GGTCTC | 2 cut(s) | 128, 2320 |
| Bsp119I | TTCGAA | 1 cut(s) | 3959 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2607, 3900 |
| Bsp13I | TCCGGA | 1 cut(s) | 2460 |
| Bsp1407I | TGTACA | 2 cut(s) | 2422, 3573 |
| BspACI | CCGC | 4 cut(s) | 696, 1729, 2682, 3520 |
| BspANI | GGCC | 3 cut(s) | 1119, 1428, 3033 |
| BspCNI | CTCAG | 5 cut(s) | 399, 532, 2781, 3490, 3772 |
| BspDI | ATCGAT | 2 cut(s) | 1334, 1581 |
| BspEI | TCCGGA | 1 cut(s) | 2460 |
| BspHI | TCATGA | 2 cut(s) | 3025, 3324 |
| BspLI | GGNNCC | 9 cut(s) | 12, 40, 231, 1118, 1679, 1726, 1727, 2311, 3390 |
| BspMAI | CTGCAG | 1 cut(s) | 2550 |
| BspMI | ACCTGC | 3 cut(s) | 1711, 2164, 2459 |
| BspOI | GCTAGC | 1 cut(s) | 2994 |
| BspT104I | TTCGAA | 1 cut(s) | 3959 |
| BspTNI | GGTCTC | 2 cut(s) | 128, 2320 |
| BsrDI | GCAATG | 3 cut(s) | 318, 1057, 1230 |
| BsrFI | RCCGGY | 1 cut(s) | 137 |
| BsrGI | TGTACA | 2 cut(s) | 2422, 3573 |
| BssAI | RCCGGY | 1 cut(s) | 137 |
| BssECI | CCNNGG | 8 cut(s) | 1635, 1709, 2305, 2306, 2469, 3505, 3795, 3900 |
| BssT1I | CCWWGG | 3 cut(s) | 1709, 3795, 3900 |
| Bst2UI | CCWGG | 7 cut(s) | 1637, 1675, 2307, 2816, 3156, 3507, 3600 |
| Bst4CI | ACNGT | 8 cut(s) | 1247, 1402, 1419, 2078, 2131, 2438, 2628, 2739 |
| Bst6I | CTCTTC | 2 cut(s) | 1338, 1563 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 98 |
| BstAUI | TGTACA | 2 cut(s) | 2422, 3573 |
| BstBAI | YACGTR | 2 cut(s) | 2375, 2659 |
| BstBI | TTCGAA | 1 cut(s) | 3959 |
| BstDSI | CCRYGG | 1 cut(s) | 2469 |
| BstEII | GGTNACC | 1 cut(s) | 476 |
| BstHHI | GCGC | 1 cut(s) | 114 |
| BstMAI | GTCTC | 8 cut(s) | 128, 629, 1094, 2145, 2320, 3153, 3776, 3825 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 98, 884, 2502, 2611, 3397, 3656, 3665, 4067 |
| BstNI | CCWGG | 7 cut(s) | 1637, 1675, 2307, 2816, 3156, 3507, 3600 |
| BstNSI | RCATGY | 7 cut(s) | 1812, 2158, 2672, 2872, 3493, 4061, 4104 |
| BstPI | GGTNACC | 1 cut(s) | 476 |
| BstSCI | CCNGG | 9 cut(s) | 1635, 1673, 2305, 2814, 3081, 3106, 3154, 3505, 3598 |
| BstSFI | CTRYAG | 5 cut(s) | 1564, 1603, 2185, 2546, 3753 |
| BstV2I | GAAGAC | 5 cut(s) | 214, 995, 1635, 2650, 4088 |
| BstX2I | RGATCY | 2 cut(s) | 784, 3501 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3144 |
| BstYI | RGATCY | 2 cut(s) | 784, 3501 |
| Bsu15I | ATCGAT | 2 cut(s) | 1334, 1581 |
| BsuRI | GGCC | 3 cut(s) | 1119, 1428, 3033 |
| BsuTUI | ATCGAT | 2 cut(s) | 1334, 1581 |
| BtgI | CCRYGG | 1 cut(s) | 2469 |
| BtsI | GCAGTG | 1 cut(s) | 1990 |
| BveI | ACCTGC | 3 cut(s) | 1711, 2164, 2459 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4073 |
| CciI | TCATGA | 2 cut(s) | 3025, 3324 |
| CfoI | GCGC | 1 cut(s) | 114 |
| Cfr10I | RCCGGY | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 4 cut(s) | 1117, 1725, 2310, 4119 |
| ClaI | ATCGAT | 2 cut(s) | 1334, 1581 |
| CseI | GACGC | 3 cut(s) | 2341, 2655, 3931 |
| DraI | TTTAAA | 6 cut(s) | 424, 882, 1699, 2140, 2256, 3184 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1639 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1219, 3619 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1639 |
| Eam1104I | CTCTTC | 2 cut(s) | 1338, 1563 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1219, 3619 |
| EarI | CTCTTC | 2 cut(s) | 1338, 1563 |
| Eco130I | CCWWGG | 3 cut(s) | 1709, 3795, 3900 |
| Eco147I | AGGCCT | 1 cut(s) | 3033 |
| Eco24I | GRGCYC | 2 cut(s) | 2607, 3900 |
| Eco31I | GGTCTC | 2 cut(s) | 128, 2320 |
| Eco47I | GGWCC | 3 cut(s) | 1725, 2310, 4119 |
| Eco57I | CTGAAG | 2 cut(s) | 282, 1817 |
| Eco72I | CACGTG | 2 cut(s) | 2375, 2659 |
| Eco91I | GGTNACC | 1 cut(s) | 476 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1117, 1725, 4119 |
| EcoO65I | GGTNACC | 1 cut(s) | 476 |
| EcoRI | GAATTC | 2 cut(s) | 646, 2214 |
| EcoRII | CCWGG | 7 cut(s) | 1635, 1673, 2305, 2814, 3154, 3505, 3598 |
| EcoT14I | CCWWGG | 3 cut(s) | 1709, 3795, 3900 |
| EcoT22I | ATGCAT | 3 cut(s) | 2811, 3969, 4063 |
| EcoT38I | GRGCYC | 2 cut(s) | 2607, 3900 |
| ErhI | CCWWGG | 3 cut(s) | 1709, 3795, 3900 |
| Esp3I | CGTCTC | 1 cut(s) | 1094 |
| FaqI | GGGAC | 5 cut(s) | 518, 1525, 1738, 1925, 2323 |
| FauI | CCCGC | 3 cut(s) | 689, 1736, 2675 |
| FauNDI | CATATG | 2 cut(s) | 487, 3367 |
| FbaI | TGATCA | 2 cut(s) | 447, 3558 |
| FblI | GTMKAC | 1 cut(s) | 770 |
| FriOI | GRGCYC | 2 cut(s) | 2607, 3900 |
| GlaI | GCGC | 1 cut(s) | 113 |
| GsaI | CCCAGC | 1 cut(s) | 3775 |
| GsuI | CTGGAG | 7 cut(s) | 1641, 1657, 1658, 2169, 2837, 3177, 3894 |
| HaeIII | GGCC | 3 cut(s) | 1119, 1428, 3033 |
| HapII | CCGG | 4 cut(s) | 138, 2461, 3082, 3107 |
| HgaI | GACGC | 3 cut(s) | 2341, 2655, 3931 |
| HhaI | GCGC | 1 cut(s) | 114 |
| Hin6I | GCGC | 1 cut(s) | 112 |
| HinP1I | GCGC | 1 cut(s) | 112 |
| HincII | GTYRAC | 3 cut(s) | 31, 322, 771 |
| HindII | GTYRAC | 3 cut(s) | 31, 322, 771 |
| HindIII | AAGCTT | 4 cut(s) | 1627, 1818, 2250, 3398 |
| HpaII | CCGG | 4 cut(s) | 138, 2461, 3082, 3107 |
| HphI | GGTGA | 8 cut(s) | 470, 962, 1324, 2748, 2804, 3314, 3588, 3643 |
| HpyCH4III | ACNGT | 8 cut(s) | 1247, 1402, 1419, 2078, 2131, 2438, 2628, 2739 |
| HpyCH4IV | ACGT | 3 cut(s) | 1000, 2374, 2658 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 98, 884, 2502, 2611, 3397, 3656, 3665, 4067 |
| HpySE526I | ACGT | 3 cut(s) | 1000, 2374, 2658 |
| HspAI | GCGC | 1 cut(s) | 112 |
| KflI | GGGWCCC | 1 cut(s) | 1725 |
| Kpn2I | TCCGGA | 1 cut(s) | 2460 |
| Ksp22I | TGATCA | 2 cut(s) | 447, 3558 |
| MaeII | ACGT | 3 cut(s) | 1000, 2374, 2658 |
| MaeIII | GTNAC | 9 cut(s) | 77, 476, 2353, 2631, 2754, 3512, 3594, 3904, 4045 |
| MfeI | CAATTG | 1 cut(s) | 3729 |
| MflI | RGATCY | 2 cut(s) | 784, 3501 |
| MhlI | GDGCHC | 2 cut(s) | 2607, 3900 |
| MlyI | GAGTC | 4 cut(s) | 376, 1547, 1649, 3827 |
| MmeI | TCCRAC | 5 cut(s) | 1991, 2060, 2499, 2912, 3067 |
| Mph1103I | ATGCAT | 3 cut(s) | 2811, 3969, 4063 |
| MroI | TCCGGA | 1 cut(s) | 2460 |
| MroXI | GAANNNNTTC | 7 cut(s) | 1002, 1197, 1296, 2937, 3033, 3061, 3995 |
| MslI | CAYNNNNRTG | 5 cut(s) | 122, 471, 486, 2360, 4147 |
| MspA1I | CMGCKG | 2 cut(s) | 2772, 3520 |
| MspI | CCGG | 4 cut(s) | 138, 2461, 3082, 3107 |
| MspR9I | CCNGG | 9 cut(s) | 1637, 1675, 2307, 2816, 3083, 3108, 3156, 3507, 3600 |
| MunI | CAATTG | 1 cut(s) | 3729 |
| Mva1269I | GAATGC | 2 cut(s) | 464, 698 |
| MvaI | CCWGG | 7 cut(s) | 1637, 1675, 2307, 2816, 3156, 3507, 3600 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 98, 884, 2502, 2611, 3397, 3656, 3665, 4067 |
| NciI | CCSGG | 2 cut(s) | 3083, 3108 |
| NdeI | CATATG | 2 cut(s) | 487, 3367 |
| NheI | GCTAGC | 1 cut(s) | 2990 |
| NlaIV | GGNNCC | 9 cut(s) | 12, 40, 231, 1118, 1679, 1726, 1727, 2311, 3390 |
| NmeAIII | GCCGAG | 1 cut(s) | 1474 |
| NmuCI | GTSAC | 5 cut(s) | 476, 2353, 2754, 3594, 4045 |
| NsiI | ATGCAT | 3 cut(s) | 2811, 3969, 4063 |
| NspI | RCATGY | 7 cut(s) | 1812, 2158, 2672, 2872, 3493, 4061, 4104 |
| NspV | TTCGAA | 1 cut(s) | 3959 |
| OliI | CACNNNNGTG | 2 cut(s) | 122, 2360 |
| PaeI | GCATGC | 3 cut(s) | 1812, 2872, 4061 |
| PagI | TCATGA | 2 cut(s) | 3025, 3324 |
| PaqCI | CACCTGC | 1 cut(s) | 2164 |
| PasI | CCCWGGG | 1 cut(s) | 2306 |
| PceI | AGGCCT | 1 cut(s) | 3033 |
| PctI | GAATGC | 2 cut(s) | 464, 698 |
| PdmI | GAANNNNTTC | 7 cut(s) | 1002, 1197, 1296, 2937, 3033, 3061, 3995 |
| PleI | GAGTC | 4 cut(s) | 376, 1546, 1648, 3826 |
| PmaCI | CACGTG | 2 cut(s) | 2375, 2659 |
| PmlI | CACGTG | 2 cut(s) | 2375, 2659 |
| PpsI | GAGTC | 4 cut(s) | 376, 1546, 1648, 3826 |
| Ppu21I | YACGTR | 2 cut(s) | 2375, 2659 |
| PpuMI | RGGWCCY | 2 cut(s) | 1725, 4119 |
| PshBI | ATTAAT | 1 cut(s) | 1460 |
| Psp5II | RGGWCCY | 2 cut(s) | 1725, 4119 |
| Psp6I | CCWGG | 7 cut(s) | 1635, 1673, 2305, 2814, 3154, 3505, 3598 |
| PspCI | CACGTG | 2 cut(s) | 2375, 2659 |
| PspEI | GGTNACC | 1 cut(s) | 476 |
| PspFI | CCCAGC | 1 cut(s) | 3771 |
| PspGI | CCWGG | 7 cut(s) | 1635, 1673, 2305, 2814, 3154, 3505, 3598 |
| PspN4I | GGNNCC | 9 cut(s) | 12, 40, 231, 1118, 1679, 1726, 1727, 2311, 3390 |
| PspPI | GGNCC | 4 cut(s) | 1117, 1725, 2310, 4119 |
| PspPPI | RGGWCCY | 2 cut(s) | 1725, 4119 |
| PstI | CTGCAG | 1 cut(s) | 2550 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4073 |
| PsuI | RGATCY | 2 cut(s) | 784, 3501 |
| PvuII | CAGCTG | 1 cut(s) | 2772 |
| RseI | CAYNNNNRTG | 5 cut(s) | 122, 471, 486, 2360, 4147 |
| SalI | GTCGAC | 1 cut(s) | 769 |
| Sau96I | GGNCC | 4 cut(s) | 1117, 1725, 2310, 4119 |
| ScaI | AGTACT | 1 cut(s) | 2585 |
| SchI | GAGTC | 4 cut(s) | 376, 1547, 1649, 3827 |
| ScrFI | CCNGG | 9 cut(s) | 1637, 1675, 2307, 2816, 3083, 3108, 3156, 3507, 3600 |
| SduI | GDGCHC | 2 cut(s) | 2607, 3900 |
| SfcI | CTRYAG | 5 cut(s) | 1564, 1603, 2185, 2546, 3753 |
| SfuI | TTCGAA | 1 cut(s) | 3959 |
| SinI | GGWCC | 3 cut(s) | 1725, 2310, 4119 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 122, 471, 486, 2360, 4147 |
| SmlI | CTYRAG | 3 cut(s) | 632, 2099, 4114 |
| SmoI | CTYRAG | 3 cut(s) | 632, 2099, 4114 |
| SphI | GCATGC | 3 cut(s) | 1812, 2872, 4061 |
| SseBI | AGGCCT | 1 cut(s) | 3033 |
| SsiI | CCGC | 4 cut(s) | 696, 1729, 2682, 3520 |
| SspI | AATATT | 5 cut(s) | 393, 555, 2884, 3865, 3953 |
| StuI | AGGCCT | 1 cut(s) | 3033 |
| StyD4I | CCNGG | 9 cut(s) | 1635, 1673, 2305, 2814, 3081, 3106, 3154, 3505, 3598 |
| StyI | CCWWGG | 3 cut(s) | 1709, 3795, 3900 |
| TaaI | ACNGT | 8 cut(s) | 1247, 1402, 1419, 2078, 2131, 2438, 2628, 2739 |
| TaiI | ACGT | 3 cut(s) | 1003, 2377, 2661 |
| TaqI | TCGA | 6 cut(s) | 770, 1334, 1581, 1611, 3816, 3959 |
| TatI | WGTACW | 7 cut(s) | 1227, 1659, 2317, 2422, 2583, 3318, 3573 |
| TseFI | GTSAC | 5 cut(s) | 476, 2353, 2754, 3594, 4045 |
| Tsp45I | GTSAC | 5 cut(s) | 476, 2353, 2754, 3594, 4045 |
| TspGWI | ACGGA | 5 cut(s) | 185, 1076, 1868, 2458, 3434 |
| VpaK11BI | GGWCC | 3 cut(s) | 1725, 2310, 4119 |
| VspI | ATTAAT | 1 cut(s) | 1460 |
| XbaI | TCTAGA | 2 cut(s) | 976, 1421 |
| XceI | RCATGY | 7 cut(s) | 1812, 2158, 2672, 2872, 3493, 4061, 4104 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 127, 470, 2899 |
| XmiI | GTMKAC | 1 cut(s) | 770 |
| XmnI | GAANNNNTTC | 7 cut(s) | 1002, 1197, 1296, 2937, 3033, 3061, 3995 |
| ZrmI | AGTACT | 1 cut(s) | 2585 |
| Zsp2I | ATGCAT | 3 cut(s) | 2811, 3969, 4063 |