Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001073

Physical Location & Seq

Genomic Coordinates Reverse (-)

30547664 .. 30558666

Gene Structure 11003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G363600.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4209 bp

ATGATGTCGGCAGAAGCTACGGAACCAGTTGACATGGAGATGGACGGAATCCAACTATCTGCTGATCCTCTCCCATTCGCCAGAAGTTACCAGCTAGAAGCATTAGAGGCAGCAATTAAGCAGAACACAATAGTGTTCTTGGAGACTGGCTCTGGAAAGACTCTGATTGCCATCATGCTTCTCCGGAGCTATGCATATATGCTTCGCAAGCCTTCTCCATTCGTTGCCGTCTTCTTGGTTCCTCAAGTTGTCTTGGTCAAACAACAAGCTGAAGCCTTGAAAATGCACACTGACTTGAAAGTGGGAATGTATTGGGGAGACATGGGAGTTGACTTCTGGGAAGCTGATATGTGGAAGCAACAAATAGAAAAATATGAGGTGCTCGTGATGACTCCTGCAATACTGCTTAGTAATTTGAGGCATAGCTTCTTCAAACTAAGCATGATAAAGGTTTTGATTCTCGATGAATGCCATCATGCGAGGGGTAACCACCCGTATGCTTGCATAATGAAGGACTTCTTTCATCGTCAACTACATTCTGATGCAGCTGAACTTCCAAGAATATTTGGAATGACTGCTTCCCCCATAAAGTCAAAAGGTGGAAAGTCAGAGTCATTCTATTGGAAAATAATTGATGAACTTGAGGCCCTGATGAATTCAAAGGTGTATACATGTGTTAGTGAATCTGTGCTTGCTGAGTTTATACCACATTCGATTCCAAAGTTTAAATATTACAGGCACAAGGAGATTCCATATGCCTTGTATGCACATATAACAAACCAGTTGAAGAATTTGAAAGAAAAGCATGAACTGTCGCTAAAAAGTTTGGATCTCAGTCAATCTACATCGGAATCCATAAGCAGAAAGATGATGAAGTTTTTTTCAGCTTTAACTTTTTGTTTGGATGAACTTGGTGTTTGGCTGGCTTCAAAGGCTGCTTGGTCCTTTTCACACAAAGAAACTGACTTGTTTTCATGGGAGAAACTGGATGTGTTGGGTGATCAAATTGTTAGAAATTTTAGCTTCGAAGCCTACCAAGCATTTGCATCTTTTCTACCATCTGATCCAAAGTGGACTATTGCTGATGATGTTACATACGATTTGGATAAGGGCTTTCTAACTTCCAAAGTTGTCTGTCTCATCCAATTGCTTCTCGAATACAGATGTACTGAATTTCTTAGGGGATTGACGGATTTGAGATGTATAATATTTGTGGAGAGGGTCATAACAGCTGTCGTCATTGAATCTCTATTGAGTAACTTTCTTCCTAAACACAATGACTGGAAGACAAAATATATTGCGGGAAATAACAGTGGGATGCAATCCCAAACCAGAAAAAAGCAGAACGAGATTGTTGAAGAATTTCGTAATGGCATGGTAAACATCATTGTTGCAACATCGATTCTTGAAGAAGGTTTAGATGTTCAAAGCTGCAATTTGGTGATTAGATTTGATCCTTCTTCCACTGTTTGTAGTTTCATACAGTCTAGAGGTCGTGCAAGGATGCAAAACTCTGATTATGTATTAATGGTGAAAAGTGGCGATCGGAATACACATTCTCGACTACAAAATTATCTAGCAAGCGGAGATATAATGAGAAAAGAGTCCTTACTCCATTCTTCTCTTCCCTGCACATCTCTGGAAATCAATTTGCAGGATGATGACTTTTATCGTGTTGAAAGTACTGGAGCAAGCTTGACCCTTGGTTCCTCTATTCAGTTGATGTACTTCTATTGCTCACGGCTCCCTTCTGATGGATATTTTAAACCTGCTCCAAGGTGGGATAAGGAGACCTGCACTCTGCATCTTCCCAAGAGTTGTCCAATACCTGATGTTCATGTAGAAGGGAATGTTAAAATTCTGAAGCAGATTGCATGCTTTGAAGCTTGTAAGCAACTTCACCAAATTGGCGCTTTAACAGATAATCTTGTTCCCGATATTGTTGAGGAAGAAGGCACACAGGAGCTTGGGTGTGAGCCTTATGATGATGTACAATCCAGTTATGTCCCAGTCGAACTGGTCAAGCCTTTTTGCTCAAATGATGCTAGTATATCGTATCATTGTTACTTAATTGAGTTGAATCAGAATTTTGGATATGATATTCCAGTTCATGATATTGTACTTGGTATGAGGAGTGAGCTTGATTGCGATATTGCAAATATGCATTTTGACTTAGAAGTTGGCAGAGGTACTTTAACTATGAACTTTAAATATGTTGGAGAGATTCATCTTAGTTCAGAGCAGGTACTTCTTTGCAGAAAGTTCCAAATCACAATTTTCCGAATTCTAATGGATCACAATTTGAATAAGTTGGAAGAAGTTTTAGATGGACTTTGTTTGGGAGGACAAATTGGGGTTGATTATCTTTTGCTCCCAGGGACCAAAGTACCTCAGAGACCTCTGATAATTGATTGGAAATGCATTACATCTGTATTGTTTCCATGTGAAGAATATTCTAAGGATCATGTAGATTGTTCTCTACCGAATTGGATATATACCAAAAGCGGCGTCGTTTGTACTTGCATGATCCAGAATTCCTTGGTCTGTACTCCTCATAATGGTACCTTATATTGCATCACTGGTTTGTTGGGCGAGTTGAATGGAAACTCACTTCTTAGTCTTAGGGATGGCAGAGCCCTTACCTACAAGAAGTACTATGAAGAACGGCATAGGATTAACTTGTGTTTTGATCAACAGTTGTTGCTGAAAGGGAGACGTGTTTTCCAGGTACAAAATTATCTTCAGAGGTGCAGACAACAGACAGAAAAAGAATCGAGTCATACATCTGTTGAGTTGCCGCCGGAACTTTGCTCTATTATTATGTCACCCATATCAGTCAGCACTTTATATTCATTCTCATTTATTCCGTCAATTATGCATCACCTGGAGGCTTTACTTCTTGCTGTCAACTTGAAAAAAATTGTTTTGGATAATTGCATGCAAAATATTATTATTCCAACGACTAAGGTCTTGGAAGCTATTACAACAAAAAAGTGCCAAGAGAAGTTCCATTTGGAATCCCTAGAGGCTCTTGGAGATTCATTTCTAAAATATGCTGCTAGTCATCAGCTCTTTAAAACCTATCAAACTAATCATGAAGGCCTTCTCAGTGTAAAGAAGGACAAGATAGTTTCTAATGCTGCCCTTTGCAAGCTTGGATGTGAACGCAAACTTCCGGGCTTTATACGTAACGAGTCTTTTGATCCAAAAAAGTGGATTATACCAGGAGATTATTCTGAAAGTCATTTACTAAATGAGGAGTTGCTTTCTAATGAAAGAAGAATTTACTTCAGGGAAAGAAGGAAGGTAAAAAGCAAGAGTGTTGCTGATGTTGTTGAGGCACTAATTGGTGCATTTCTTAGCACTGGTGGTGAAATAGCTGCCATGTATTTCATGAATTGGGTTGGTATAAAGGTTGATTCTGTCCATATACCATATGGTAGGCACTTCCAAGTGCAACCAGAGAAGCTTGTTAATGTCAGACATGTAGAGTCCCTATTAAATTACTCATTCCGTGATCCTTCTCTTCTAGTGGAAGCACTAACCCATGGTTCATACATGCTTCCTGAAATTCCAGGATGTTATCAGCGGTTGGAATTTCTTGGGGATGCAGTGTTGGATCATCTAATTACTATTTATTTGTACAATAAATATCCTGGGATGTCACCTGGAATTTTAACTGATATGAGGTCTGCTTCTGTGAACAATGATTGTTATGCTCGTTCTGCTATAAAGGCTGGATTGCACAAGCACATCCTGCATGCTTCACACAAACTCCACAAGGATATAGTTTATACAATTGAAAACTTTGAGCGGTTATCAAGCGAATCAACTTTTGGATGGGAATCTGAGACATCCTTCCCCAAGGTACTTGGAGATGTTATCGAGTCTCTAGCAGGGGCAATTTTTGTTGATTCCGGATATGATAAGAAGATTGTCTTTCAAAGTATAAGTCCTCTCATACAGCCTTTGGTTACTCCTGAAACGATGAGGCTCCATCCTGTAAGAGAGTTGAATGAACATTGCCAAAAAATGCATTATAATTTGAAGAAACCCGTCAAGTCTTTCCAAAATAATGTGGCTACTGTTACAATAGAGGTCGAAGCTAATGGGTACACATACAAGCATTCATCAACGGCTTCTAACAAGAAGACAGCACTCAAATTAGCTTGCAAGGAAGTTTTGAGGTCCTTGAAAGAAAGTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010033 GO:0010216 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051214 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098542 GO:0098586 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

DEAD Dicer_dimer Helicase_C PAZ ResIII Ribonuclease_3 dsrm

Protein Analysis

1403

Amino Acids

159.5

Weight (kDa)

6.44

Isoelectric Point (pI)

43.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001073)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03300 AT3G03300 AT3G03300 AT3G03300
fragaria_vesca	FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g37440 FvH4_6g37440 FvH4_6g37440
malus_domestica	MD04G1247300.v1.1 MD12G1087600.v1.1 MD14G1082600.v1.1 MD14G1082800.v1.1
prunus_persica	Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.7G047700_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1
pyrus_communis	pycom04g21800 pycom12g07520 pycom14g07170
rosa_chinensis	RchiOBHm_Chr3g0447571
rosa_laevigata	RLG00000020482 RLG00000025988
rosa_multiflora	Rmu_sc0003550.1_g000007
rosa_roxburghii	Rroxscaffold_5G00355920
rosa_rugosa	Rorug02G0603000 Rorug02G0603100
rosa_samantha	Rh3AG003300 Rh3BG002800 Rh3CG003100 Rh3DG003100
rosa_wichuraiana	Rw3G000220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	4041
Acc36I	ACCTGC	3 cut(s)	1777, 1802, 2233
Acc65I	GGTACC	1 cut(s)	2561
AccB1I	GGYRCC	1 cut(s)	2561
AccBSI	CCGCTC	1 cut(s)	3814
AccI	GTMKAC	1 cut(s)	668
AccIII	TCCGGA	2 cut(s)	183, 3917
AciI	CCGC	6 cut(s)	1301, 1584, 2505, 2798, 3589, 3814
AcuI	CTGAAG	4 cut(s)	291, 1883, 2726, 3274
AcyI	GRCGYC	1 cut(s)	2508
AfiI	CCNNNNNNNGG	2 cut(s)	1754, 2558
AflIII	ACRYGT	3 cut(s)	671, 2716, 3484
AjiI	CACGTC	1 cut(s)	2717
AjnI	CCWGG	7 cut(s)	2374, 2724, 2883, 3223, 3574, 3655, 3667
AjuI	GAANNNNNNNTTGG	4 cut(s)	2996, 3028, 3819, 3851
AleI	CACNNNNGTG	1 cut(s)	131
Alw21I	GWGCWC	1 cut(s)	384
Alw26I	GTCTC	8 cut(s)	137, 312, 1142, 1784, 2389, 2707, 3845, 3894
Aor13HI	TCCGGA	2 cut(s)	183, 3917
AoxI	GGCC	2 cut(s)	645, 3100
ApeKI	GCWGC	7 cut(s)	110, 545, 935, 1431, 3056, 3140, 3380
ArsI	GACNNNNNNTTYG	4 cut(s)	2493, 2525, 3937, 3969
AseI	ATTAAT	1 cut(s)	1526
Asp700I	GAANNNNTTC	3 cut(s)	515, 1362, 3102
Asp718I	GGTACC	1 cut(s)	2561
AspLEI	GCGC	1 cut(s)	1913
AspS9I	GGNCC	4 cut(s)	646, 942, 2379, 4188
AsuC2I	CCSGG	1 cut(s)	3177
AsuHPI	GGTGA	8 cut(s)	1010, 1453, 1543, 1892, 2817, 2873, 3383, 3657
AsuII	TTCGAA	1 cut(s)	1026
AvaII	GGWCC	3 cut(s)	942, 2379, 4188
BaeI	ACNNNNGTAYC	2 cut(s)	2370, 2403
BanI	GGYRCC	1 cut(s)	2561
BanII	GRGCYC	1 cut(s)	2638
BauI	CACGAG	1 cut(s)	383
BbsI	GAAGAC	3 cut(s)	223, 1292, 4157
Bbv12I	GWGCWC	1 cut(s)	384
BbvI	GCAGC	7 cut(s)	122, 557, 922, 1418, 3043, 3127, 3367
BccI	CCATC	9 cut(s)	34, 179, 480, 1066, 1748, 2321, 2621, 3834, 4005
BceAI	ACGGC	4 cut(s)	212, 1757, 2681, 4152
BciT130I	CCWGG	7 cut(s)	2376, 2726, 2885, 3225, 3576, 3657, 3669
BclI	TGATCA	2 cut(s)	1000, 2689
BcnI	CCSGG	1 cut(s)	3177
BcoDI	GTCTC	8 cut(s)	137, 312, 1142, 1784, 2389, 2707, 3845, 3894
BfaI	CTAG	8 cut(s)	95, 1488, 1577, 2046, 3023, 3060, 3530, 3893
BfoI	RGCGCY	1 cut(s)	1914
BfuAI	ACCTGC	3 cut(s)	1777, 1802, 2233
BisI	GCNGC	9 cut(s)	111, 546, 936, 1432, 2506, 2798, 3057, 3141, 3381
BlsI	GCNGC	9 cut(s)	112, 547, 937, 1433, 2507, 2799, 3058, 3142, 3382
BmcAI	AGTACT	2 cut(s)	1684, 2654
Bme1390I	CCNGG	8 cut(s)	2376, 2726, 2885, 3177, 3225, 3576, 3657, 3669
Bme18I	GGWCC	3 cut(s)	942, 2379, 4188
BmgBI	CACGTC	1 cut(s)	2717
BmgT120I	GGNCC	4 cut(s)	646, 942, 2379, 4188
BmiI	GGNNCC	7 cut(s)	24, 240, 1708, 1745, 2380, 2563, 3995
BmrFI	CCNGG	8 cut(s)	2376, 2726, 2885, 3177, 3225, 3576, 3657, 3669
BmrI	ACTGGG	1 cut(s)	2003
BmsI	GCATC	9 cut(s)	532, 1055, 1308, 1494, 1813, 2032, 2583, 2887, 3598
BmuI	ACTGGG	1 cut(s)	2003
BoxI	GACNNNNGTC	1 cut(s)	2966
BpiI	GAAGAC	3 cut(s)	223, 1292, 4157
BplI	GAGNNNNNCTC	2 cut(s)	134, 166
BpmI	CTGGAG	2 cut(s)	1707, 2906
Bpu14I	TTCGAA	1 cut(s)	1026
BpuEI	CTTGAG	2 cut(s)	228, 662
BpuMI	CCSGG	1 cut(s)	3177
Bsa29I	ATCGAT	1 cut(s)	1400
BsaAI	YACGTR	1 cut(s)	3188
BsaBI	GATNNNNATC	2 cut(s)	170, 3844
BsaHI	GRCGYC	1 cut(s)	2508
BsaI	GGTCTC	2 cut(s)	1784, 2389
BsaJI	CCNNGG	8 cut(s)	1702, 1775, 2374, 2375, 2538, 3547, 3656, 3864
BsaWI	WCCGGW	2 cut(s)	183, 3917
BsaXI	ACNNNNNCTCC	4 cut(s)	1955, 1985, 3759, 3789
Bsc4I	CCNNNNNNNGG	2 cut(s)	1754, 2558
Bse3DI	GCAATG	1 cut(s)	4021
Bse8I	GATNNNNATC	2 cut(s)	170, 3844
BseAI	TCCGGA	2 cut(s)	183, 3917
BseBI	CCWGG	7 cut(s)	2376, 2726, 2885, 3225, 3576, 3657, 3669
BseCI	ATCGAT	1 cut(s)	1400
BseDI	CCNNGG	8 cut(s)	1702, 1775, 2374, 2375, 2538, 3547, 3656, 3864
BseJI	GATNNNNATC	2 cut(s)	170, 3844
BseLI	CCNNNNNNNGG	2 cut(s)	1754, 2558
BseMI	GCAATG	1 cut(s)	4021
BseMII	CTCAG	5 cut(s)	687, 847, 2405, 3121, 3840
BseRI	GAGGAG	3 cut(s)	2146, 2541, 3272
BseXI	GCAGC	7 cut(s)	122, 557, 922, 1418, 3043, 3127, 3367
BsgI	GTGCAG	3 cut(s)	1615, 1780, 2770
Bsh1285I	CGRYCG	1 cut(s)	1546
BshFI	GGCC	2 cut(s)	647, 3102
BshNI	GGYRCC	1 cut(s)	2561
BshVI	ATCGAT	1 cut(s)	1400
BsiEI	CGRYCG	1 cut(s)	1546
BsiHKAI	GWGCWC	1 cut(s)	384
BsiSI	CCGG	4 cut(s)	184, 2801, 3176, 3918
BslFI	GGGAC	3 cut(s)	1991, 2392, 3478
BslI	CCNNNNNNNGG	2 cut(s)	1754, 2558
BsmAI	GTCTC	8 cut(s)	137, 312, 1142, 1784, 2389, 2707, 3845, 3894
BsmBI	CGTCTC	1 cut(s)	2707
BsmFI	GGGAC	3 cut(s)	1991, 2392, 3478
BsmI	GAATGC	2 cut(s)	473, 4126
BsnI	GGCC	2 cut(s)	647, 3102
Bso31I	GGTCTC	2 cut(s)	1784, 2389
Bsp119I	TTCGAA	1 cut(s)	1026
Bsp1286I	GDGCHC	2 cut(s)	384, 2638
Bsp13I	TCCGGA	2 cut(s)	183, 3917
Bsp1407I	TGTACA	2 cut(s)	1990, 3642
Bsp19I	CCATGG	1 cut(s)	3547
BspACI	CCGC	6 cut(s)	1301, 1584, 2505, 2798, 3589, 3814
BspANI	GGCC	2 cut(s)	647, 3102
BspCNI	CTCAG	5 cut(s)	688, 846, 2404, 3120, 3841
BspDI	ATCGAT	1 cut(s)	1400
BspEI	TCCGGA	2 cut(s)	183, 3917
BspHI	TCATGA	3 cut(s)	2110, 3094, 3393
BspLI	GGNNCC	7 cut(s)	24, 240, 1708, 1745, 2380, 2563, 3995
BspMI	ACCTGC	3 cut(s)	1777, 1802, 2233
BspT104I	TTCGAA	1 cut(s)	1026
BspT107I	GGYRCC	1 cut(s)	2561
BspTNI	GGTCTC	2 cut(s)	1784, 2389
BsrBI	CCGCTC	1 cut(s)	3814
BsrDI	GCAATG	1 cut(s)	4021
BsrGI	TGTACA	2 cut(s)	1990, 3642
BssECI	CCNNGG	8 cut(s)	1702, 1775, 2374, 2375, 2538, 3547, 3656, 3864
BssNAI	GTATAC	1 cut(s)	669
BssNI	GRCGYC	1 cut(s)	2508
BssSI	CACGAG	1 cut(s)	383
BssT1I	CCWWGG	5 cut(s)	1702, 1775, 2538, 3547, 3864
Bst1107I	GTATAC	1 cut(s)	669
Bst2BI	CACGAG	1 cut(s)	383
Bst2UI	CCWGG	7 cut(s)	2376, 2726, 2885, 3225, 3576, 3657, 3669
Bst4CI	ACNGT	6 cut(s)	813, 1313, 1468, 1485, 2697, 4087
Bst6I	CTCTTC	2 cut(s)	1629, 3531
BstACI	GRCGYC	1 cut(s)	2508
BstAPI	GCANNNNNTGC	1 cut(s)	3757
BstAUI	TGTACA	2 cut(s)	1990, 3642
BstBAI	YACGTR	1 cut(s)	3188
BstBI	TTCGAA	1 cut(s)	1026
BstDSI	CCRYGG	1 cut(s)	3547
BstEII	GGTNACC	1 cut(s)	485
BstH2I	RGCGCY	1 cut(s)	1914
BstHHI	GCGC	1 cut(s)	1913
BstMAI	GTCTC	8 cut(s)	137, 312, 1142, 1784, 2389, 2707, 3845, 3894
BstMCI	CGRYCG	1 cut(s)	1546
BstMWI	GCNNNNNNNGC	8 cut(s)	107, 208, 764, 932, 1037, 3725, 3734, 3757
BstNI	CCWGG	7 cut(s)	2376, 2726, 2885, 3225, 3576, 3657, 3669
BstNSI	RCATGY	6 cut(s)	675, 1878, 2941, 3488, 3562, 3764
BstPAI	GACNNNNGTC	1 cut(s)	2966
BstPI	GGTNACC	1 cut(s)	485
BstSCI	CCNGG	8 cut(s)	2374, 2724, 2883, 3175, 3223, 3574, 3655, 3667
BstSNI	TACGTA	1 cut(s)	3188
BstV1I	GCAGC	7 cut(s)	122, 557, 922, 1418, 3043, 3127, 3367
BstV2I	GAAGAC	3 cut(s)	223, 1292, 4157
BstX2I	RGATCY	1 cut(s)	829
BstXI	CCANNNNNNTGG	1 cut(s)	3213
BstYI	RGATCY	1 cut(s)	829
BstZ17I	GTATAC	1 cut(s)	669
Bsu15I	ATCGAT	1 cut(s)	1400
BsuRI	GGCC	2 cut(s)	647, 3102
BsuTUI	ATCGAT	1 cut(s)	1400
BtgI	CCRYGG	1 cut(s)	3547
BtrI	CACGTC	1 cut(s)	2717
BtsI	GCAGTG	1 cut(s)	3618
BtsIMutI	CAGTG	7 cut(s)	288, 1318, 1464, 2577, 3115, 3363, 3618
BveI	ACCTGC	3 cut(s)	1777, 1802, 2233
CciI	TCATGA	3 cut(s)	2110, 3094, 3393
CfoI	GCGC	1 cut(s)	1913
Cfr13I	GGNCC	4 cut(s)	646, 942, 2379, 4188
ClaI	ATCGAT	1 cut(s)	1400
CseI	GACGC	1 cut(s)	2497
DraI	TTTAAA	4 cut(s)	727, 1765, 2209, 3076
Eam1104I	CTCTTC	2 cut(s)	1629, 3531
EarI	CTCTTC	2 cut(s)	1629, 3531
Eco105I	TACGTA	1 cut(s)	3188
Eco130I	CCWWGG	5 cut(s)	1702, 1775, 2538, 3547, 3864
Eco147I	AGGCCT	1 cut(s)	3102
Eco24I	GRGCYC	1 cut(s)	2638
Eco31I	GGTCTC	2 cut(s)	1784, 2389
Eco47I	GGWCC	3 cut(s)	942, 2379, 4188
Eco57I	CTGAAG	4 cut(s)	291, 1883, 2726, 3274
Eco91I	GGTNACC	1 cut(s)	485
EcoO109I	RGGNCCY	2 cut(s)	646, 4188
EcoO65I	GGTNACC	1 cut(s)	485
EcoRI	GAATTC	3 cut(s)	655, 2283, 2533
EcoRII	CCWGG	7 cut(s)	2374, 2724, 2883, 3223, 3574, 3655, 3667
EcoT14I	CCWWGG	5 cut(s)	1702, 1775, 2538, 3547, 3864
EcoT22I	ATGCAT	5 cut(s)	196, 2166, 2423, 2880, 4038
EcoT38I	GRGCYC	1 cut(s)	2638
ErhI	CCWWGG	5 cut(s)	1702, 1775, 2538, 3547, 3864
Esp3I	CGTCTC	1 cut(s)	2707
FalI	AAGNNNNNCTT	4 cut(s)	503, 535, 3923, 3955
FaqI	GGGAC	3 cut(s)	1991, 2392, 3478
FauI	CCCGC	1 cut(s)	1294
FauNDI	CATATG	2 cut(s)	754, 3436
FbaI	TGATCA	2 cut(s)	1000, 2689
FblI	GTMKAC	1 cut(s)	668
Fnu4HI	GCNGC	9 cut(s)	111, 546, 936, 1432, 2506, 2798, 3057, 3141, 3381
FriOI	GRGCYC	1 cut(s)	2638
Fsp4HI	GCNGC	9 cut(s)	111, 546, 936, 1432, 2506, 2798, 3057, 3141, 3381
FspBI	CTAG	8 cut(s)	95, 1488, 1577, 2046, 3023, 3060, 3530, 3893
GlaI	GCGC	1 cut(s)	1912
GluI	GCNGC	9 cut(s)	111, 546, 936, 1432, 2506, 2798, 3057, 3141, 3381
GsuI	CTGGAG	2 cut(s)	1707, 2906
HaeII	RGCGCY	1 cut(s)	1914
HaeIII	GGCC	2 cut(s)	647, 3102
HapII	CCGG	4 cut(s)	184, 2801, 3176, 3918
HgaI	GACGC	1 cut(s)	2497
HhaI	GCGC	1 cut(s)	1913
Hin1I	GRCGYC	1 cut(s)	2508
Hin6I	GCGC	1 cut(s)	1911
HinP1I	GCGC	1 cut(s)	1911
HincII	GTYRAC	4 cut(s)	31, 331, 530, 2908
HindII	GTYRAC	4 cut(s)	31, 331, 530, 2908
HindIII	AAGCTT	4 cut(s)	1693, 1884, 3152, 3467
HpaII	CCGG	4 cut(s)	184, 2801, 3176, 3918
HphI	GGTGA	8 cut(s)	1010, 1453, 1543, 1892, 2817, 2873, 3383, 3657
Hpy99I	CGWCG	1 cut(s)	2513
HpyCH4III	ACNGT	6 cut(s)	813, 1313, 1468, 1485, 2697, 4087
HpyCH4IV	ACGT	2 cut(s)	2716, 3187
HpyF10VI	GCNNNNNNNGC	8 cut(s)	107, 208, 764, 932, 1037, 3725, 3734, 3757
HpySE526I	ACGT	2 cut(s)	2716, 3187
Hsp92I	GRCGYC	1 cut(s)	2508
HspAI	GCGC	1 cut(s)	1911
Kpn2I	TCCGGA	2 cut(s)	183, 3917
KpnI	GGTACC	1 cut(s)	2565
Ksp22I	TGATCA	2 cut(s)	1000, 2689
LmnI	GCTCC	7 cut(s)	186, 1688, 1749, 1777, 1963, 2376, 3999
Lsp1109I	GCAGC	7 cut(s)	122, 557, 922, 1418, 3043, 3127, 3367
LweI	GCATC	9 cut(s)	532, 1055, 1308, 1494, 1813, 2032, 2583, 2887, 3598
MaeI	CTAG	8 cut(s)	95, 1488, 1577, 2046, 3023, 3060, 3530, 3893
MaeII	ACGT	2 cut(s)	2716, 3187
MbiI	CCGCTC	1 cut(s)	3814
MfeI	CAATTG	2 cut(s)	1145, 3798
MflI	RGATCY	1 cut(s)	829
MhlI	GDGCHC	2 cut(s)	384, 2638
MlyI	GAGTC	8 cut(s)	154, 385, 620, 1613, 2785, 3203, 3500, 3896
MmeI	TCCRAC	6 cut(s)	76, 2197, 2292, 2981, 3573, 3597
Mph1103I	ATGCAT	5 cut(s)	196, 2166, 2423, 2880, 4038
MroI	TCCGGA	2 cut(s)	183, 3917
MroXI	GAANNNNTTC	3 cut(s)	515, 1362, 3102
MslI	CAYNNNNRTG	4 cut(s)	38, 131, 495, 540
MspA1I	CMGCKG	3 cut(s)	548, 1232, 3589
MspI	CCGG	4 cut(s)	184, 2801, 3176, 3918
MspR9I	CCNGG	8 cut(s)	2376, 2726, 2885, 3177, 3225, 3576, 3657, 3669
MunI	CAATTG	2 cut(s)	1145, 3798
Mva1269I	GAATGC	2 cut(s)	473, 4126
MvaI	CCWGG	7 cut(s)	2376, 2726, 2885, 3225, 3576, 3657, 3669
MwoI	GCNNNNNNNGC	8 cut(s)	107, 208, 764, 932, 1037, 3725, 3734, 3757
NciI	CCSGG	1 cut(s)	3177
NcoI	CCATGG	1 cut(s)	3547
NdeI	CATATG	2 cut(s)	754, 3436
NlaIV	GGNNCC	7 cut(s)	24, 240, 1708, 1745, 2380, 2563, 3995
NmuCI	GTSAC	2 cut(s)	2823, 3663
NsiI	ATGCAT	5 cut(s)	196, 2166, 2423, 2880, 4038
NspI	RCATGY	6 cut(s)	675, 1878, 2941, 3488, 3562, 3764
NspV	TTCGAA	1 cut(s)	1026
OliI	CACNNNNGTG	1 cut(s)	131
PaeI	GCATGC	3 cut(s)	1878, 2941, 3764
PagI	TCATGA	3 cut(s)	2110, 3094, 3393
PasI	CCCWGGG	1 cut(s)	2375
PceI	AGGCCT	1 cut(s)	3102
PciI	ACATGT	2 cut(s)	671, 3484
PctI	GAATGC	2 cut(s)	473, 4126
PdmI	GAANNNNTTC	3 cut(s)	515, 1362, 3102
PfoI	TCCNGGA	1 cut(s)	3574
PkrI	GCNGC	9 cut(s)	112, 547, 937, 1433, 2507, 2799, 3058, 3142, 3382
Ple19I	CGATCG	1 cut(s)	1546
PleI	GAGTC	8 cut(s)	154, 385, 619, 1612, 2784, 3202, 3499, 3895
PpsI	GAGTC	8 cut(s)	154, 385, 619, 1612, 2784, 3202, 3499, 3895
Ppu21I	YACGTR	1 cut(s)	3188
PpuMI	RGGWCCY	1 cut(s)	4188
PscI	ACATGT	2 cut(s)	671, 3484
PshAI	GACNNNNGTC	1 cut(s)	2966
PshBI	ATTAAT	1 cut(s)	1526
PsiI	TTATAA	1 cut(s)	4041
Psp5II	RGGWCCY	1 cut(s)	4188
Psp6I	CCWGG	7 cut(s)	2374, 2724, 2883, 3223, 3574, 3655, 3667
PspEI	GGTNACC	1 cut(s)	485
PspGI	CCWGG	7 cut(s)	2374, 2724, 2883, 3223, 3574, 3655, 3667
PspN4I	GGNNCC	7 cut(s)	24, 240, 1708, 1745, 2380, 2563, 3995
PspPI	GGNCC	4 cut(s)	646, 942, 2379, 4188
PspPPI	RGGWCCY	1 cut(s)	4188
PsuI	RGATCY	1 cut(s)	829
PvuI	CGATCG	1 cut(s)	1546
PvuII	CAGCTG	2 cut(s)	548, 1232
RseI	CAYNNNNRTG	4 cut(s)	38, 131, 495, 540
SatI	GCNGC	9 cut(s)	111, 546, 936, 1432, 2506, 2798, 3057, 3141, 3381
Sau96I	GGNCC	4 cut(s)	646, 942, 2379, 4188
ScaI	AGTACT	2 cut(s)	1684, 2654
SchI	GAGTC	8 cut(s)	154, 385, 620, 1613, 2785, 3203, 3500, 3896
ScrFI	CCNGG	8 cut(s)	2376, 2726, 2885, 3177, 3225, 3576, 3657, 3669
SduI	GDGCHC	2 cut(s)	384, 2638
SfaNI	GCATC	9 cut(s)	532, 1055, 1308, 1494, 1813, 2032, 2583, 2887, 3598
SfuI	TTCGAA	1 cut(s)	1026
SinI	GGWCC	3 cut(s)	942, 2379, 4188
SmiMI	CAYNNNNRTG	4 cut(s)	38, 131, 495, 540
SmlI	CTYRAG	2 cut(s)	243, 641
SmoI	CTYRAG	2 cut(s)	243, 641
SnaBI	TACGTA	1 cut(s)	3188
SphI	GCATGC	3 cut(s)	1878, 2941, 3764
SseBI	AGGCCT	1 cut(s)	3102
SsiI	CCGC	6 cut(s)	1301, 1584, 2505, 2798, 3589, 3814
SspI	AATATT	5 cut(s)	564, 731, 1209, 2453, 2947
SspMI	CTAG	8 cut(s)	95, 1488, 1577, 2046, 3023, 3060, 3530, 3893
StuI	AGGCCT	1 cut(s)	3102
StyD4I	CCNGG	8 cut(s)	2374, 2724, 2883, 3175, 3223, 3574, 3655, 3667
StyI	CCWWGG	5 cut(s)	1702, 1775, 2538, 3547, 3864
TaaI	ACNGT	6 cut(s)	813, 1313, 1468, 1485, 2697, 4087
TaiI	ACGT	2 cut(s)	2719, 3190
TatI	WGTACW	9 cut(s)	1166, 1682, 1725, 1990, 2119, 2516, 2546, 2652, 3642
TauI	GCSGC	2 cut(s)	2508, 2800
TscAI	CASTG	7 cut(s)	295, 1318, 1471, 2584, 3115, 3370, 3618
TseFI	GTSAC	2 cut(s)	2823, 3663
TseI	GCWGC	7 cut(s)	110, 545, 935, 1431, 3056, 3140, 3380
Tsp45I	GTSAC	2 cut(s)	2823, 3663
TspGWI	ACGGA	5 cut(s)	35, 60, 1205, 2856, 3503
TspRI	CASTG	7 cut(s)	295, 1318, 1471, 2584, 3115, 3370, 3618
VpaK11BI	GGWCC	3 cut(s)	942, 2379, 4188
VspI	ATTAAT	1 cut(s)	1526
XbaI	TCTAGA	1 cut(s)	1487
XceI	RCATGY	6 cut(s)	675, 1878, 2941, 3488, 3562, 3764
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3434
XmiI	GTMKAC	1 cut(s)	668
XmnI	GAANNNNTTC	3 cut(s)	515, 1362, 3102
XspI	CTAG	8 cut(s)	95, 1488, 1577, 2046, 3023, 3060, 3530, 3893
ZrmI	AGTACT	2 cut(s)	1684, 2654
Zsp2I	ATGCAT	5 cut(s)	196, 2166, 2423, 2880, 4038

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.