Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001073

Physical Location & Seq

Genomic Coordinates Forward (+)

72171333 .. 72172547

Gene Structure 1215 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0603000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGGAACACAATGGCGAGCTGACGGGGCACCAATTCTCCCTTCCAGCCGAGATCATAGTTGAGATTCTTTCAAGGCTATCAGTGAAGTCCTTATGCCGCTTCAGGTGCGTATCAAAGCCTTGGCGTTCTCTAATCTCCAACACCAAGTTCATTGCACTGCACGCCAAGAAAACCCTCGAGGATAAAGAGGTATTCCTTCGGAGACGAAGAGTCATATTTAAAGTGGCACTACGTTACCTTTACTCTTTGGACCTAGACCAGTTCCTCAACCATAACTATAACGATGATGATGACAATGCACTGGTTCTTAAGAATCGCCATGTTCATGCAGATAATAATCATGATGGTTTGATACCAGCCACCGAGCTCGATTTTGTTTCTGCAGAAGGACGTAGACCCATATACTTCATCTACTCCTGCAATAACTTGTTGTTGTGCGATATGAGGCGTGGGTTTTATTTGGTTAACCCTGCAACCAGGGAGATGAAGAAAGTACCAAAGACACCATCATGGAGACCTGTGAGGCCCTATTGCTTGAGCTTATGTGGATTTGGATTTGATTCCTCCACCAATGAGTACAAGGTGGTTAACGGGCAGGTCTATTCTGATATCAATGTAATCGTATTTAGTGTCTATACACTGAAAACTGATTCTTGGCGAAAGATCGAGTGCTTCTCTCCCTACCATGCTTATTGGTTTCAGGGGATTTTTCTGAATGGAGCTATTCATTGGTCGGCAACGACAGTTGGAGATCGATCCTCTTCGGTGATTGTATCTTTTCTATTAGCAGAGGAGGAGGTTCGCGAAATTCGACTCCCACCCATCGGTGATACTTGTTTAGCAAACCTGGGAGTGTTTAGAGATTGCCTATGTATAACGCTCGCTGGTATTGATCAAACATTCAATGAGTTTTGGGTCATGAAAGAATATGGGGTGAGCGAGTCTTGGACTAGAATGAGGGTCTCCATGCCATATCACCAATTGTCACATTTTGGTTTCTCTACAAAATCTCATGATTTGATGGTGTGTGGAAGTTCATTTGTTATGTACAACTTCAAAGAAGAAAGTTTTAGGAACCTTCCAATTCGTGATACCACCTTAGGAGGTAATGGCGTTGGGGTTTATGTTGAGGGACTTTTTCCACTAATCGATCGAGAGCAGGACGAGAGCCGTAGAGTAGATAATCAAGTATTGATTAAGCTCAAGCATGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010033 GO:0010216 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051214 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098542 GO:0098586 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

DEAD Dicer_dimer Helicase_C PAZ ResIII Ribonuclease_3 dsrm

Protein Analysis

404

Amino Acids

46.64

Weight (kDa)

7.96

Isoelectric Point (pI)

38.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	13 - 50	4e-11	F-box domain
F-box-like	PF12937	13 - 48	1.3e-09	F-box-like
FBA_1	PF07734	133 - 336	3.2e-22	F-box associated beta propeller domain
FBA_3	PF08268	133 - 337	1.5e-18	F-box associated beta propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001073)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03300 AT3G03300 AT3G03300 AT3G03300
fragaria_vesca	FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g37440 FvH4_6g37440 FvH4_6g37440
malus_domestica	MD04G1247300.v1.1 MD12G1087600.v1.1 MD14G1082600.v1.1 MD14G1082800.v1.1
prunus_persica	Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.7G047700_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1
pyrus_communis	pycom04g21800 pycom12g07520 pycom14g07170
rosa_chinensis	RchiOBHm_Chr3g0447571
rosa_laevigata	RLG00000020482 RLG00000025988
rosa_multiflora	Rmu_sc0003550.1_g000007
rosa_roxburghii	Rroxscaffold_5G00355920
rosa_rugosa	Rorug02G0603000 Rorug02G0603100
rosa_samantha	Rh3AG003300 Rh3BG002800 Rh3CG003100 Rh3DG003100
rosa_wichuraiana	Rw3G000220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	176
Acc36I	ACCTGC	1 cut(s)	586
AccB1I	GGYRCC	1 cut(s)	27
AccI	GTMKAC	1 cut(s)	394
AccII	CGCG	1 cut(s)	804
AciI	CCGC	1 cut(s)	97
AclWI	GGATC	1 cut(s)	750
AcsI	RAATTY	1 cut(s)	807
AcuI	CTGAAG	1 cut(s)	85
AfaI	GTAC	3 cut(s)	495, 578, 1049
AfiI	CCNNNNNNNGG	1 cut(s)	824
AflII	CTTAAG	1 cut(s)	308
AgsI	TTSAA	3 cut(s)	72, 904, 1057
AhdI	GACNNNNNGTC	1 cut(s)	209
AjnI	CCWGG	2 cut(s)	476, 846
AjuI	GAANNNNNNNTTGG	4 cut(s)	24, 56, 131, 163
AluBI	AGCT	5 cut(s)	19, 367, 540, 722, 1201
AluI	AGCT	5 cut(s)	19, 367, 540, 722, 1201
Alw21I	GWGCWC	1 cut(s)	369
Alw26I	GTCTC	3 cut(s)	196, 508, 967
AlwI	GGATC	1 cut(s)	750
Ama87I	CYCGRG	1 cut(s)	176
AoxI	GGCC	1 cut(s)	524
ApoI	RAATTY	1 cut(s)	807
AspS9I	GGNCC	2 cut(s)	250, 525
AsuHPI	GGTGA	4 cut(s)	778, 839, 946, 968
AvaI	CYCGRG	1 cut(s)	176
AvaII	GGWCC	1 cut(s)	250
AxyI	CCTNAGG	1 cut(s)	1099
BaeGI	GKGCMC	1 cut(s)	30
BanI	GGYRCC	1 cut(s)	27
BanII	GRGCYC	1 cut(s)	369
Bbv12I	GWGCWC	1 cut(s)	369
BccI	CCATC	4 cut(s)	338, 514, 830, 1015
BceAI	ACGGC	1 cut(s)	1155
BciT130I	CCWGG	2 cut(s)	478, 848
BclI	TGATCA	1 cut(s)	892
BcoDI	GTCTC	3 cut(s)	196, 508, 967
BfaI	CTAG	2 cut(s)	254, 951
BfmI	CTRYAG	1 cut(s)	381
BfrI	CTTAAG	1 cut(s)	308
BfuAI	ACCTGC	1 cut(s)	586
BisI	GCNGC	1 cut(s)	97
BlsI	GCNGC	1 cut(s)	98
Bme1390I	CCNGG	2 cut(s)	478, 848
Bme18I	GGWCC	1 cut(s)	250
BmeRI	GACNNNNNGTC	1 cut(s)	209
BmeT110I	CYCGRG	1 cut(s)	176
BmgT120I	GGNCC	2 cut(s)	250, 525
BmiI	GGNNCC	2 cut(s)	29, 1076
BmrFI	CCNGG	2 cut(s)	478, 848
BplI	GAGNNNNNCTC	2 cut(s)	659, 691
BpuEI	CTTGAG	2 cut(s)	556, 1187
Bsa29I	ATCGAT	2 cut(s)	754, 1149
BsaBI	GATNNNNATC	1 cut(s)	336
BsaI	GGTCTC	2 cut(s)	508, 967
BsaJI	CCNNGG	3 cut(s)	119, 477, 847
BsaXI	ACNNNNNCTCC	2 cut(s)	20, 50
Bsc4I	CCNNNNNNNGG	1 cut(s)	824
Bse1I	ACTGG	2 cut(s)	259, 306
Bse21I	CCTNAGG	1 cut(s)	1099
Bse3DI	GCAATG	1 cut(s)	150
Bse8I	GATNNNNATC	1 cut(s)	336
BseBI	CCWGG	2 cut(s)	478, 848
BseCI	ATCGAT	2 cut(s)	754, 1149
BseDI	CCNNGG	3 cut(s)	119, 477, 847
BseJI	GATNNNNATC	1 cut(s)	336
BseLI	CCNNNNNNNGG	1 cut(s)	824
BseMI	GCAATG	1 cut(s)	150
BseNI	ACTGG	2 cut(s)	259, 306
BseRI	GAGGAG	2 cut(s)	806, 809
BseSI	GKGCMC	1 cut(s)	30
BsgI	GTGCAG	1 cut(s)	143
Bsh1236I	CGCG	1 cut(s)	804
Bsh1285I	CGRYCG	1 cut(s)	1153
BshFI	GGCC	1 cut(s)	526
BshNI	GGYRCC	1 cut(s)	27
BshVI	ATCGAT	2 cut(s)	754, 1149
BsiEI	CGRYCG	1 cut(s)	1153
BsiHKAI	GWGCWC	1 cut(s)	369
BsiHKCI	CYCGRG	1 cut(s)	176
BslFI	GGGAC	1 cut(s)	1146
BslI	CCNNNNNNNGG	1 cut(s)	824
BsmAI	GTCTC	3 cut(s)	196, 508, 967
BsmBI	CGTCTC	1 cut(s)	196
BsmFI	GGGAC	1 cut(s)	1146
BsnI	GGCC	1 cut(s)	526
Bso31I	GGTCTC	2 cut(s)	508, 967
BsoBI	CYCGRG	1 cut(s)	176
Bsp1286I	GDGCHC	2 cut(s)	30, 369
Bsp1407I	TGTACA	1 cut(s)	1047
Bsp143I	GATC	6 cut(s)	51, 663, 751, 755, 892, 1150
Bsp68I	TCGCGA	1 cut(s)	804
BspACI	CCGC	1 cut(s)	97
BspANI	GGCC	1 cut(s)	526
BspDI	ATCGAT	2 cut(s)	754, 1149
BspFNI	CGCG	1 cut(s)	804
BspHI	TCATGA	3 cut(s)	340, 918, 1012
BspLI	GGNNCC	2 cut(s)	29, 1076
BspMAI	CTGCAG	1 cut(s)	385
BspMI	ACCTGC	1 cut(s)	586
BspPI	GGATC	1 cut(s)	750
BspT107I	GGYRCC	1 cut(s)	27
BspTI	CTTAAG	1 cut(s)	308
BspTNI	GGTCTC	2 cut(s)	508, 967
BsrDI	GCAATG	1 cut(s)	150
BsrGI	TGTACA	1 cut(s)	1047
BsrI	ACTGG	2 cut(s)	259, 306
BssECI	CCNNGG	3 cut(s)	119, 477, 847
BssMI	GATC	6 cut(s)	51, 663, 751, 755, 892, 1150
BssT1I	CCWWGG	1 cut(s)	119
Bst2UI	CCWGG	2 cut(s)	478, 848
Bst4CI	ACNGT	1 cut(s)	745
Bst6I	CTCTTC	2 cut(s)	202, 766
BstAFI	CTTAAG	1 cut(s)	308
BstAUI	TGTACA	1 cut(s)	1047
BstC8I	GCNNGC	4 cut(s)	17, 162, 882, 1209
BstDEI	CTNAG	1 cut(s)	1099
BstFNI	CGCG	1 cut(s)	804
BstKTI	GATC	6 cut(s)	54, 666, 754, 758, 895, 1153
BstMAI	GTCTC	3 cut(s)	196, 508, 967
BstMBI	GATC	6 cut(s)	51, 663, 751, 755, 892, 1150
BstMCI	CGRYCG	1 cut(s)	1153
BstMWI	GCNNNNNNNGC	3 cut(s)	25, 105, 161
BstNI	CCWGG	2 cut(s)	478, 848
BstNSI	RCATGY	1 cut(s)	1211
BstSCI	CCNGG	2 cut(s)	476, 846
BstSFI	CTRYAG	1 cut(s)	381
BstSLI	GKGCMC	1 cut(s)	30
BstUI	CGCG	1 cut(s)	804
Bsu15I	ATCGAT	2 cut(s)	754, 1149
Bsu36I	CCTNAGG	1 cut(s)	1099
BsuRI	GGCC	1 cut(s)	526
BsuTUI	ATCGAT	2 cut(s)	754, 1149
BtsI	GCAGTG	1 cut(s)	155
BtsIMutI	CAGTG	4 cut(s)	87, 155, 299, 638
BtuMI	TCGCGA	1 cut(s)	804
BveI	ACCTGC	1 cut(s)	586
Cac8I	GCNNGC	4 cut(s)	17, 162, 882, 1209
CciI	TCATGA	3 cut(s)	340, 918, 1012
Cfr13I	GGNCC	2 cut(s)	250, 525
ClaI	ATCGAT	2 cut(s)	754, 1149
Csp6I	GTAC	3 cut(s)	494, 577, 1048
CviAII	CATG	9 cut(s)	320, 326, 341, 510, 686, 919, 967, 1013, 1208
CviQI	GTAC	3 cut(s)	494, 577, 1048
DdeI	CTNAG	1 cut(s)	1099
DpnI	GATC	6 cut(s)	53, 665, 753, 757, 894, 1152
DpnII	GATC	6 cut(s)	51, 663, 751, 755, 892, 1150
DraI	TTTAAA	1 cut(s)	220
DriI	GACNNNNNGTC	1 cut(s)	209
Eam1104I	CTCTTC	2 cut(s)	202, 766
Eam1105I	GACNNNNNGTC	1 cut(s)	209
EarI	CTCTTC	2 cut(s)	202, 766
Ecl136II	GAGCTC	1 cut(s)	367
Eco130I	CCWWGG	1 cut(s)	119
Eco24I	GRGCYC	1 cut(s)	369
Eco31I	GGTCTC	2 cut(s)	508, 967
Eco32I	GATATC	1 cut(s)	610
Eco47I	GGWCC	1 cut(s)	250
Eco53kI	GAGCTC	1 cut(s)	367
Eco57I	CTGAAG	1 cut(s)	85
Eco81I	CCTNAGG	1 cut(s)	1099
Eco88I	CYCGRG	1 cut(s)	176
EcoICRI	GAGCTC	1 cut(s)	367
EcoO109I	RGGNCCY	1 cut(s)	525
EcoRII	CCWGG	2 cut(s)	476, 846
EcoRV	GATATC	1 cut(s)	610
EcoT14I	CCWWGG	1 cut(s)	119
EcoT22I	ATGCAT	1 cut(s)	1213
EcoT38I	GRGCYC	1 cut(s)	369
ErhI	CCWWGG	1 cut(s)	119
Esp3I	CGTCTC	1 cut(s)	196
FaeI	CATG	9 cut(s)	323, 329, 344, 513, 689, 922, 970, 1016, 1211
FaqI	GGGAC	1 cut(s)	1146
FatI	CATG	9 cut(s)	319, 325, 340, 509, 685, 918, 966, 1012, 1207
FbaI	TGATCA	1 cut(s)	892
FblI	GTMKAC	1 cut(s)	394
Fnu4HI	GCNGC	1 cut(s)	97
FriOI	GRGCYC	1 cut(s)	369
Fsp4HI	GCNGC	1 cut(s)	97
FspBI	CTAG	2 cut(s)	254, 951
GluI	GCNGC	1 cut(s)	97
HaeIII	GGCC	1 cut(s)	526
Hin1II	CATG	9 cut(s)	323, 329, 344, 513, 689, 922, 970, 1016, 1211
HincII	GTYRAC	2 cut(s)	466, 589
HindII	GTYRAC	2 cut(s)	466, 589
HinfI	GANTC	7 cut(s)	64, 210, 313, 560, 650, 813, 941
HpaI	GTTAAC	2 cut(s)	466, 589
HphI	GGTGA	4 cut(s)	778, 839, 946, 968
Hpy166II	GTNNAC	3 cut(s)	395, 466, 589
Hpy188I	TCNGA	3 cut(s)	201, 607, 714
Hpy188III	TCNNGA	6 cut(s)	341, 803, 919, 1013, 1088, 1154
Hpy8I	GTNNAC	3 cut(s)	395, 466, 589
HpyAV	CCTTC	4 cut(s)	50, 206, 380, 1088
HpyCH4III	ACNGT	1 cut(s)	745
HpyCH4IV	ACGT	2 cut(s)	232, 391
HpyCH4V	TGCA	8 cut(s)	155, 160, 299, 329, 383, 420, 473, 1211
HpyF10VI	GCNNNNNNNGC	3 cut(s)	25, 105, 161
HpyF3I	CTNAG	1 cut(s)	1099
HpySE526I	ACGT	2 cut(s)	232, 391
Hsp92II	CATG	9 cut(s)	323, 329, 344, 513, 689, 922, 970, 1016, 1211
Ksp22I	TGATCA	1 cut(s)	892
KspAI	GTTAAC	2 cut(s)	466, 589
Kzo9I	GATC	6 cut(s)	51, 663, 751, 755, 892, 1150
LmnI	GCTCC	1 cut(s)	719
MaeI	CTAG	2 cut(s)	254, 951
MaeII	ACGT	2 cut(s)	232, 391
MaeIII	GTNAC	2 cut(s)	233, 984
MalI	GATC	6 cut(s)	53, 665, 753, 757, 894, 1152
MboI	GATC	6 cut(s)	51, 663, 751, 755, 892, 1150
MboII	GAAGA	4 cut(s)	219, 499, 753, 1073
MfeI	CAATTG	1 cut(s)	980
MhlI	GDGCHC	2 cut(s)	30, 369
MluCI	AATT	4 cut(s)	32, 807, 980, 1083
MlyI	GAGTC	3 cut(s)	219, 807, 950
MmeI	TCCRAC	2 cut(s)	162, 727
Mph1103I	ATGCAT	1 cut(s)	1213
MseI	TTAA	5 cut(s)	219, 309, 465, 588, 1197
MslI	CAYNNNNRTG	2 cut(s)	324, 508
MspCI	CTTAAG	1 cut(s)	308
MspR9I	CCNGG	2 cut(s)	478, 848
MunI	CAATTG	1 cut(s)	980
MvaI	CCWGG	2 cut(s)	478, 848
MvnI	CGCG	1 cut(s)	804
MwoI	GCNNNNNNNGC	3 cut(s)	25, 105, 161
NdeII	GATC	6 cut(s)	51, 663, 751, 755, 892, 1150
NlaIII	CATG	9 cut(s)	323, 329, 344, 513, 689, 922, 970, 1016, 1211
NlaIV	GGNNCC	2 cut(s)	29, 1076
NmeAIII	GCCGAG	1 cut(s)	73
NmuCI	GTSAC	1 cut(s)	984
NruI	TCGCGA	1 cut(s)	804
NsiI	ATGCAT	1 cut(s)	1213
NspI	RCATGY	1 cut(s)	1211
PaeI	GCATGC	1 cut(s)	1211
PaeR7I	CTCGAG	1 cut(s)	176
PagI	TCATGA	3 cut(s)	340, 918, 1012
PcsI	WCGNNNNNNNCGW	1 cut(s)	808
PfeI	GAWTC	4 cut(s)	64, 313, 560, 650
PkrI	GCNGC	1 cut(s)	98
Ple19I	CGATCG	1 cut(s)	1153
PleI	GAGTC	3 cut(s)	218, 807, 949
PpsI	GAGTC	3 cut(s)	218, 807, 949
Psp124BI	GAGCTC	1 cut(s)	369
Psp6I	CCWGG	2 cut(s)	476, 846
PspGI	CCWGG	2 cut(s)	476, 846
PspN4I	GGNNCC	2 cut(s)	29, 1076
PspPI	GGNCC	2 cut(s)	250, 525
PspXI	VCTCGAGB	1 cut(s)	176
PstI	CTGCAG	1 cut(s)	385
PvuI	CGATCG	1 cut(s)	1153
RruI	TCGCGA	1 cut(s)	804
RsaI	GTAC	3 cut(s)	495, 578, 1049
RsaNI	GTAC	3 cut(s)	494, 577, 1048
RseI	CAYNNNNRTG	2 cut(s)	324, 508
SacI	GAGCTC	1 cut(s)	369
SaqAI	TTAA	5 cut(s)	219, 309, 465, 588, 1197
SatI	GCNGC	1 cut(s)	97
Sau3AI	GATC	6 cut(s)	51, 663, 751, 755, 892, 1150
Sau96I	GGNCC	2 cut(s)	250, 525
SchI	GAGTC	3 cut(s)	219, 807, 950
ScrFI	CCNGG	2 cut(s)	478, 848
SduI	GDGCHC	2 cut(s)	30, 369
SfcI	CTRYAG	1 cut(s)	381
Sfr274I	CTCGAG	1 cut(s)	176
SinI	GGWCC	1 cut(s)	250
SlaI	CTCGAG	1 cut(s)	176
SmiMI	CAYNNNNRTG	2 cut(s)	324, 508
SmlI	CTYRAG	4 cut(s)	176, 308, 535, 1202
SmoI	CTYRAG	4 cut(s)	176, 308, 535, 1202
SphI	GCATGC	1 cut(s)	1211
Sse9I	AATT	4 cut(s)	32, 807, 980, 1083
SsiI	CCGC	1 cut(s)	97
SspMI	CTAG	2 cut(s)	254, 951
SstI	GAGCTC	1 cut(s)	369
StyD4I	CCNGG	2 cut(s)	476, 846
StyI	CCWWGG	1 cut(s)	119
TaaI	ACNGT	1 cut(s)	745
TaiI	ACGT	2 cut(s)	235, 394
TaqI	TCGA	7 cut(s)	177, 369, 666, 754, 811, 1149, 1153
TasI	AATT	4 cut(s)	32, 807, 980, 1083
TatI	WGTACW	2 cut(s)	576, 1047
TauI	GCSGC	1 cut(s)	99
TfiI	GAWTC	4 cut(s)	64, 313, 560, 650
Tru1I	TTAA	5 cut(s)	219, 309, 465, 588, 1197
Tru9I	TTAA	5 cut(s)	219, 309, 465, 588, 1197
TscAI	CASTG	4 cut(s)	87, 162, 306, 645
TseFI	GTSAC	1 cut(s)	984
Tsp45I	GTSAC	1 cut(s)	984
TspDTI	ATGAA	7 cut(s)	139, 314, 397, 500, 716, 935, 1026
TspRI	CASTG	4 cut(s)	87, 162, 306, 645
Vha464I	CTTAAG	1 cut(s)	308
VpaK11BI	GGWCC	1 cut(s)	250
XapI	RAATTY	1 cut(s)	807
XceI	RCATGY	1 cut(s)	1211
XhoI	CTCGAG	1 cut(s)	176
XmiI	GTMKAC	1 cut(s)	394
XspI	CTAG	2 cut(s)	254, 951
Zsp2I	ATGCAT	1 cut(s)	1213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.