Belongs to the helicase family. Dicer subfamily
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ResIII | PF04851 | 22 - 190 | 2.7e-14 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 23 - 190 | 4.3e-16 | DEAD/DEAH box helicase |
| Helicase_C | PF00271 | 369 - 487 | 5.9e-17 | Helicase conserved C-terminal domain |
| Dicer_dimer | PF03368 | 558 - 632 | 3.4e-12 | Dicer dimerisation domain |
| PAZ | PF02170 | 820 - 948 | 5.7e-13 | PAZ domain |
| Ribonuclease_3 | PF00636 | 992 - 1109 | 1.4e-18 | Ribonuclease III domain |
| Ribonucleas_3_3 | PF14622 | 1159 - 1296 | 1.3e-15 | Ribonuclease-III-like |
| Ribonuclease_3 | PF00636 | 1182 - 1293 | 1.5e-22 | Ribonuclease III domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2191 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1666 |
| Acc36I | ACCTGC | 2 cut(s) | 1738, 2191 |
| AccI | GTMKAC | 4 cut(s) | 312, 650, 746, 2504 |
| AccII | CGCG | 1 cut(s) | 257 |
| AccIII | TCCGGA | 2 cut(s) | 186, 2487 |
| AciI | CCGC | 3 cut(s) | 103, 1756, 3547 |
| AcuI | CTGAAG | 2 cut(s) | 1844, 3639 |
| AcvI | CACGTG | 1 cut(s) | 2686 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1715, 2516, 3108, 3109, 3490 |
| AflIII | ACRYGT | 1 cut(s) | 653 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1246, 3646 |
| AjiI | CACGTC | 1 cut(s) | 2402 |
| AjnI | CCWGG | 8 cut(s) | 953, 1662, 2332, 2841, 3181, 3532, 3613, 3625 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2949, 2981, 3777, 3809 |
| AleI | CACNNNNGTG | 2 cut(s) | 113, 2387 |
| Alw21I | GWGCWC | 1 cut(s) | 2897 |
| Alw26I | GTCTC | 9 cut(s) | 119, 620, 1121, 1745, 2172, 2347, 3180, 3803, 3852 |
| Alw44I | GTGCAC | 1 cut(s) | 2893 |
| Ama87I | CYCGRG | 1 cut(s) | 1699 |
| Aor13HI | TCCGGA | 2 cut(s) | 186, 2487 |
| AoxI | GGCC | 4 cut(s) | 1144, 1453, 3058, 3297 |
| ApaLI | GTGCAC | 1 cut(s) | 2893 |
| ApeKI | GCWGC | 9 cut(s) | 92, 914, 1392, 2575, 2861, 3014, 3025, 3098, 3338 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 790, 822 |
| AseI | ATTAAT | 1 cut(s) | 1487 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1224, 1323, 2964, 3088, 4022 |
| AspS9I | GGNCC | 6 cut(s) | 811, 921, 1144, 2337, 3298, 4146 |
| AsuC2I | CCSGG | 2 cut(s) | 3110, 3135 |
| AsuHPI | GGTGA | 6 cut(s) | 989, 1351, 2775, 2831, 3341, 3615 |
| AsuII | TTCGAA | 1 cut(s) | 3986 |
| AsuNHI | GCTAGC | 1 cut(s) | 3017 |
| AvaI | CYCGRG | 1 cut(s) | 1699 |
| AvaII | GGWCC | 4 cut(s) | 811, 921, 2337, 4146 |
| BaeGI | GKGCMC | 1 cut(s) | 2897 |
| BanII | GRGCYC | 2 cut(s) | 2634, 3927 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1238, 1270 |
| BbrPI | CACGTG | 1 cut(s) | 2686 |
| BbsI | GAAGAC | 4 cut(s) | 205, 1662, 2677, 4115 |
| Bbv12I | GWGCWC | 1 cut(s) | 2897 |
| BbvI | GCAGC | 9 cut(s) | 104, 901, 1379, 2587, 2848, 3001, 3037, 3085, 3325 |
| BceAI | ACGGC | 2 cut(s) | 1440, 2639 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 23, 57, 247, 281 |
| BciT130I | CCWGG | 8 cut(s) | 955, 1664, 2334, 2843, 3183, 3534, 3615, 3627 |
| BclI | TGATCA | 2 cut(s) | 438, 3585 |
| BcnI | CCSGG | 2 cut(s) | 3110, 3135 |
| BcoDI | GTCTC | 9 cut(s) | 119, 620, 1121, 1745, 2172, 2347, 3180, 3803, 3852 |
| BfmI | CTRYAG | 5 cut(s) | 1591, 1630, 2212, 2573, 3780 |
| BfuAI | ACCTGC | 2 cut(s) | 1738, 2191 |
| BisI | GCNGC | 9 cut(s) | 93, 915, 1393, 2576, 2862, 3015, 3026, 3099, 3339 |
| BlsI | GCNGC | 9 cut(s) | 94, 916, 1394, 2577, 2863, 3016, 3027, 3100, 3340 |
| BmcAI | AGTACT | 1 cut(s) | 2612 |
| Bme18I | GGWCC | 4 cut(s) | 811, 921, 2337, 4146 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1246, 3646 |
| BmeT110I | CYCGRG | 1 cut(s) | 1699 |
| BmgBI | CACGTC | 1 cut(s) | 2402 |
| BmgT120I | GGNCC | 6 cut(s) | 811, 921, 1144, 2337, 3298, 4146 |
| BmiI | GGNNCC | 6 cut(s) | 12, 222, 1145, 1706, 2338, 3417 |
| BmsI | GCATC | 9 cut(s) | 79, 1269, 1455, 2541, 2845, 2868, 3107, 3556, 4097 |
| BmtI | GCTAGC | 1 cut(s) | 3021 |
| BpiI | GAAGAC | 4 cut(s) | 205, 1662, 2677, 4115 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 116, 148 |
| BpmI | CTGGAG | 6 cut(s) | 1668, 1685, 2196, 2864, 3204, 3921 |
| Bpu14I | TTCGAA | 1 cut(s) | 3986 |
| BpuEI | CTTGAG | 2 cut(s) | 644, 4162 |
| BpuMI | CCSGG | 2 cut(s) | 3110, 3135 |
| Bsa29I | ATCGAT | 2 cut(s) | 1361, 1608 |
| BsaAI | YACGTR | 1 cut(s) | 2686 |
| BsaI | GGTCTC | 3 cut(s) | 119, 1745, 2347 |
| BsaJI | CCNNGG | 8 cut(s) | 954, 1662, 1736, 2332, 2333, 2496, 3532, 3822 |
| BsaWI | WCCGGW | 2 cut(s) | 186, 2487 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 682, 712, 3825, 3855 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1715, 2516, 3108, 3109, 3490 |
| Bse118I | RCCGGY | 1 cut(s) | 128 |
| Bse1I | ACTGG | 9 cut(s) | 81, 462, 1123, 1247, 1651, 1959, 2542, 3328, 3410 |
| Bse3DI | GCAATG | 2 cut(s) | 309, 1257 |
| BseAI | TCCGGA | 2 cut(s) | 186, 2487 |
| BseBI | CCWGG | 8 cut(s) | 955, 1664, 2334, 2843, 3183, 3534, 3615, 3627 |
| BseCI | ATCGAT | 2 cut(s) | 1361, 1608 |
| BseDI | CCNNGG | 8 cut(s) | 954, 1662, 1736, 2332, 2333, 2496, 3532, 3822 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1715, 2516, 3108, 3109, 3490 |
| BseMI | GCAATG | 2 cut(s) | 309, 1257 |
| BseMII | CTCAG | 5 cut(s) | 389, 522, 669, 3516, 3798 |
| BseNI | ACTGG | 9 cut(s) | 81, 462, 1123, 1247, 1651, 1959, 2542, 3328, 3410 |
| BseRI | GAGGAG | 3 cut(s) | 1964, 2104, 2564 |
| BseSI | GKGCMC | 1 cut(s) | 2897 |
| BseXI | GCAGC | 9 cut(s) | 104, 901, 1379, 2587, 2848, 3001, 3037, 3085, 3325 |
| BseYI | CCCAGC | 1 cut(s) | 3798 |
| Bsh1236I | CGCG | 1 cut(s) | 257 |
| BshFI | GGCC | 4 cut(s) | 1146, 1455, 3060, 3299 |
| BshVI | ATCGAT | 2 cut(s) | 1361, 1608 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2897 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1699 |
| BsiSI | CCGG | 5 cut(s) | 129, 187, 2488, 3109, 3134 |
| BslFI | GGGAC | 4 cut(s) | 509, 1552, 1952, 2350 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1715, 2516, 3108, 3109, 3490 |
| BsmAI | GTCTC | 9 cut(s) | 119, 620, 1121, 1745, 2172, 2347, 3180, 3803, 3852 |
| BsmBI | CGTCTC | 1 cut(s) | 1121 |
| BsmFI | GGGAC | 4 cut(s) | 509, 1552, 1952, 2350 |
| BsmI | GAATGC | 1 cut(s) | 455 |
| BsnI | GGCC | 4 cut(s) | 1146, 1455, 3060, 3299 |
| Bso31I | GGTCTC | 3 cut(s) | 119, 1745, 2347 |
| BsoBI | CYCGRG | 1 cut(s) | 1699 |
| Bsp119I | TTCGAA | 1 cut(s) | 3986 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2634, 2897, 3927 |
| Bsp13I | TCCGGA | 2 cut(s) | 186, 2487 |
| Bsp1407I | TGTACA | 2 cut(s) | 2449, 3600 |
| BspACI | CCGC | 3 cut(s) | 103, 1756, 3547 |
| BspANI | GGCC | 4 cut(s) | 1146, 1455, 3060, 3299 |
| BspCNI | CTCAG | 5 cut(s) | 390, 523, 670, 3517, 3799 |
| BspDI | ATCGAT | 2 cut(s) | 1361, 1608 |
| BspEI | TCCGGA | 2 cut(s) | 186, 2487 |
| BspFNI | CGCG | 1 cut(s) | 257 |
| BspHI | TCATGA | 3 cut(s) | 376, 3052, 3351 |
| BspLI | GGNNCC | 6 cut(s) | 12, 222, 1145, 1706, 2338, 3417 |
| BspMAI | CTGCAG | 1 cut(s) | 2577 |
| BspMI | ACCTGC | 2 cut(s) | 1738, 2191 |
| BspOI | GCTAGC | 1 cut(s) | 3021 |
| BspT104I | TTCGAA | 1 cut(s) | 3986 |
| BspTNI | GGTCTC | 3 cut(s) | 119, 1745, 2347 |
| BsrDI | GCAATG | 2 cut(s) | 309, 1257 |
| BsrFI | RCCGGY | 1 cut(s) | 128 |
| BsrGI | TGTACA | 2 cut(s) | 2449, 3600 |
| BsrI | ACTGG | 9 cut(s) | 81, 462, 1123, 1247, 1651, 1959, 2542, 3328, 3410 |
| BssAI | RCCGGY | 1 cut(s) | 128 |
| BssECI | CCNNGG | 8 cut(s) | 954, 1662, 1736, 2332, 2333, 2496, 3532, 3822 |
| BssNAI | GTATAC | 2 cut(s) | 651, 747 |
| BssT1I | CCWWGG | 3 cut(s) | 1736, 2496, 3822 |
| Bst1107I | GTATAC | 2 cut(s) | 651, 747 |
| Bst2UI | CCWGG | 8 cut(s) | 955, 1664, 2334, 2843, 3183, 3534, 3615, 3627 |
| Bst6I | CTCTTC | 3 cut(s) | 1365, 1590, 1743 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 89 |
| BstAUI | TGTACA | 2 cut(s) | 2449, 3600 |
| BstBAI | YACGTR | 1 cut(s) | 2686 |
| BstBI | TTCGAA | 1 cut(s) | 3986 |
| BstEII | GGTNACC | 1 cut(s) | 467 |
| BstFNI | CGCG | 1 cut(s) | 257 |
| BstMAI | GTCTC | 9 cut(s) | 119, 620, 1121, 1745, 2172, 2347, 3180, 3803, 3852 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 89, 911, 2529, 2638, 3424, 3683, 3692, 4094 |
| BstNI | CCWGG | 8 cut(s) | 955, 1664, 2334, 2843, 3183, 3534, 3615, 3627 |
| BstNSI | RCATGY | 8 cut(s) | 657, 753, 1839, 2185, 2699, 3520, 4088, 4131 |
| BstPI | GGTNACC | 1 cut(s) | 467 |
| BstSFI | CTRYAG | 5 cut(s) | 1591, 1630, 2212, 2573, 3780 |
| BstSLI | GKGCMC | 1 cut(s) | 2897 |
| BstUI | CGCG | 1 cut(s) | 257 |
| BstV1I | GCAGC | 9 cut(s) | 104, 901, 1379, 2587, 2848, 3001, 3037, 3085, 3325 |
| BstV2I | GAAGAC | 4 cut(s) | 205, 1662, 2677, 4115 |
| BstX2I | RGATCY | 2 cut(s) | 38, 3528 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3171 |
| BstYI | RGATCY | 2 cut(s) | 38, 3528 |
| BstZ17I | GTATAC | 2 cut(s) | 651, 747 |
| Bsu15I | ATCGAT | 2 cut(s) | 1361, 1608 |
| BsuRI | GGCC | 4 cut(s) | 1146, 1455, 3060, 3299 |
| BsuTUI | ATCGAT | 2 cut(s) | 1361, 1608 |
| BtrI | CACGTC | 1 cut(s) | 2402 |
| BtsI | GCAGTG | 2 cut(s) | 1549, 2017 |
| BveI | ACCTGC | 2 cut(s) | 1738, 2191 |
| CciI | TCATGA | 3 cut(s) | 376, 3052, 3351 |
| Cfr10I | RCCGGY | 1 cut(s) | 128 |
| Cfr13I | GGNCC | 6 cut(s) | 811, 921, 1144, 2337, 3298, 4146 |
| ClaI | ATCGAT | 2 cut(s) | 1361, 1608 |
| CseI | GACGC | 4 cut(s) | 263, 2368, 2682, 3958 |
| DraI | TTTAAA | 4 cut(s) | 709, 909, 1726, 2167 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1666 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1246, 3646 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1666 |
| Eam1104I | CTCTTC | 3 cut(s) | 1365, 1590, 1743 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1246, 3646 |
| EarI | CTCTTC | 3 cut(s) | 1365, 1590, 1743 |
| Eco130I | CCWWGG | 3 cut(s) | 1736, 2496, 3822 |
| Eco147I | AGGCCT | 1 cut(s) | 3060 |
| Eco24I | GRGCYC | 2 cut(s) | 2634, 3927 |
| Eco31I | GGTCTC | 3 cut(s) | 119, 1745, 2347 |
| Eco47I | GGWCC | 4 cut(s) | 811, 921, 2337, 4146 |
| Eco57I | CTGAAG | 2 cut(s) | 1844, 3639 |
| Eco72I | CACGTG | 1 cut(s) | 2686 |
| Eco88I | CYCGRG | 1 cut(s) | 1699 |
| Eco91I | GGTNACC | 1 cut(s) | 467 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1144, 3298, 4146 |
| EcoO65I | GGTNACC | 1 cut(s) | 467 |
| EcoRI | GAATTC | 2 cut(s) | 637, 2241 |
| EcoRII | CCWGG | 8 cut(s) | 953, 1662, 2332, 2841, 3181, 3532, 3613, 3625 |
| EcoT14I | CCWWGG | 3 cut(s) | 1736, 2496, 3822 |
| EcoT22I | ATGCAT | 4 cut(s) | 478, 2838, 3996, 4090 |
| EcoT38I | GRGCYC | 2 cut(s) | 2634, 3927 |
| ErhI | CCWWGG | 3 cut(s) | 1736, 2496, 3822 |
| Esp3I | CGTCTC | 1 cut(s) | 1121 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2600, 2632 |
| FaqI | GGGAC | 4 cut(s) | 509, 1552, 1952, 2350 |
| FauI | CCCGC | 1 cut(s) | 1763 |
| FauNDI | CATATG | 2 cut(s) | 478, 3394 |
| FbaI | TGATCA | 2 cut(s) | 438, 3585 |
| FblI | GTMKAC | 4 cut(s) | 312, 650, 746, 2504 |
| Fnu4HI | GCNGC | 9 cut(s) | 93, 915, 1393, 2576, 2862, 3015, 3026, 3099, 3339 |
| FriOI | GRGCYC | 2 cut(s) | 2634, 3927 |
| Fsp4HI | GCNGC | 9 cut(s) | 93, 915, 1393, 2576, 2862, 3015, 3026, 3099, 3339 |
| GluI | GCNGC | 9 cut(s) | 93, 915, 1393, 2576, 2862, 3015, 3026, 3099, 3339 |
| GsaI | CCCAGC | 1 cut(s) | 3802 |
| GsuI | CTGGAG | 6 cut(s) | 1668, 1685, 2196, 2864, 3204, 3921 |
| HaeIII | GGCC | 4 cut(s) | 1146, 1455, 3060, 3299 |
| HapII | CCGG | 5 cut(s) | 129, 187, 2488, 3109, 3134 |
| HgaI | GACGC | 4 cut(s) | 263, 2368, 2682, 3958 |
| HincII | GTYRAC | 2 cut(s) | 31, 313 |
| HindII | GTYRAC | 2 cut(s) | 31, 313 |
| HindIII | AAGCTT | 5 cut(s) | 1654, 1845, 2096, 2277, 3425 |
| HpaII | CCGG | 5 cut(s) | 129, 187, 2488, 3109, 3134 |
| HphI | GGTGA | 6 cut(s) | 989, 1351, 2775, 2831, 3341, 3615 |
| Hpy99I | CGWCG | 1 cut(s) | 38 |
| HpyCH4IV | ACGT | 3 cut(s) | 721, 2401, 2685 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 89, 911, 2529, 2638, 3424, 3683, 3692, 4094 |
| HpySE526I | ACGT | 3 cut(s) | 721, 2401, 2685 |
| Kpn2I | TCCGGA | 2 cut(s) | 186, 2487 |
| Ksp22I | TGATCA | 2 cut(s) | 438, 3585 |
| Lsp1109I | GCAGC | 9 cut(s) | 104, 901, 1379, 2587, 2848, 3001, 3037, 3085, 3325 |
| LweI | GCATC | 9 cut(s) | 79, 1269, 1455, 2541, 2845, 2868, 3107, 3556, 4097 |
| MaeII | ACGT | 3 cut(s) | 721, 2401, 2685 |
| MaeIII | GTNAC | 7 cut(s) | 68, 467, 513, 2380, 2658, 2781, 3621 |
| MfeI | CAATTG | 2 cut(s) | 1056, 3756 |
| MflI | RGATCY | 2 cut(s) | 38, 3528 |
| MhlI | GDGCHC | 3 cut(s) | 2634, 2897, 3927 |
| MlyI | GAGTC | 5 cut(s) | 318, 367, 1574, 1676, 3854 |
| MmeI | TCCRAC | 3 cut(s) | 2526, 2939, 3094 |
| Mph1103I | ATGCAT | 4 cut(s) | 478, 2838, 3996, 4090 |
| MroI | TCCGGA | 2 cut(s) | 186, 2487 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1224, 1323, 2964, 3088, 4022 |
| MslI | CAYNNNNRTG | 5 cut(s) | 113, 462, 477, 2387, 4174 |
| MspA1I | CMGCKG | 2 cut(s) | 2799, 3547 |
| MspI | CCGG | 5 cut(s) | 129, 187, 2488, 3109, 3134 |
| MunI | CAATTG | 2 cut(s) | 1056, 3756 |
| Mva1269I | GAATGC | 1 cut(s) | 455 |
| MvaI | CCWGG | 8 cut(s) | 955, 1664, 2334, 2843, 3183, 3534, 3615, 3627 |
| MvnI | CGCG | 1 cut(s) | 257 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 89, 911, 2529, 2638, 3424, 3683, 3692, 4094 |
| NciI | CCSGG | 2 cut(s) | 3110, 3135 |
| NdeI | CATATG | 2 cut(s) | 478, 3394 |
| NheI | GCTAGC | 1 cut(s) | 3017 |
| NlaIV | GGNNCC | 6 cut(s) | 12, 222, 1145, 1706, 2338, 3417 |
| NmeAIII | GCCGAG | 1 cut(s) | 1501 |
| NmuCI | GTSAC | 3 cut(s) | 2380, 2781, 3621 |
| NsiI | ATGCAT | 4 cut(s) | 478, 2838, 3996, 4090 |
| NspI | RCATGY | 8 cut(s) | 657, 753, 1839, 2185, 2699, 3520, 4088, 4131 |
| NspV | TTCGAA | 1 cut(s) | 3986 |
| OliI | CACNNNNGTG | 2 cut(s) | 113, 2387 |
| PaeI | GCATGC | 2 cut(s) | 1839, 4088 |
| PaeR7I | CTCGAG | 1 cut(s) | 1699 |
| PagI | TCATGA | 3 cut(s) | 376, 3052, 3351 |
| PaqCI | CACCTGC | 1 cut(s) | 2191 |
| PasI | CCCWGGG | 1 cut(s) | 2333 |
| PceI | AGGCCT | 1 cut(s) | 3060 |
| PciI | ACATGT | 1 cut(s) | 653 |
| PctI | GAATGC | 1 cut(s) | 455 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1224, 1323, 2964, 3088, 4022 |
| PfoI | TCCNGGA | 1 cut(s) | 3613 |
| PkrI | GCNGC | 9 cut(s) | 94, 916, 1394, 2577, 2863, 3016, 3027, 3100, 3340 |
| PleI | GAGTC | 5 cut(s) | 317, 367, 1573, 1675, 3853 |
| PmaCI | CACGTG | 1 cut(s) | 2686 |
| PmlI | CACGTG | 1 cut(s) | 2686 |
| PpsI | GAGTC | 5 cut(s) | 317, 367, 1573, 1675, 3853 |
| Ppu21I | YACGTR | 1 cut(s) | 2686 |
| PpuMI | RGGWCCY | 1 cut(s) | 4146 |
| PscI | ACATGT | 1 cut(s) | 653 |
| PshBI | ATTAAT | 1 cut(s) | 1487 |
| Psp5II | RGGWCCY | 1 cut(s) | 4146 |
| Psp6I | CCWGG | 8 cut(s) | 953, 1662, 2332, 2841, 3181, 3532, 3613, 3625 |
| PspCI | CACGTG | 1 cut(s) | 2686 |
| PspEI | GGTNACC | 1 cut(s) | 467 |
| PspFI | CCCAGC | 1 cut(s) | 3798 |
| PspGI | CCWGG | 8 cut(s) | 953, 1662, 2332, 2841, 3181, 3532, 3613, 3625 |
| PspN4I | GGNNCC | 6 cut(s) | 12, 222, 1145, 1706, 2338, 3417 |
| PspPI | GGNCC | 6 cut(s) | 811, 921, 1144, 2337, 3298, 4146 |
| PspPPI | RGGWCCY | 1 cut(s) | 4146 |
| PspXI | VCTCGAGB | 1 cut(s) | 1699 |
| PstI | CTGCAG | 1 cut(s) | 2577 |
| PsuI | RGATCY | 2 cut(s) | 38, 3528 |
| PvuII | CAGCTG | 1 cut(s) | 2799 |
| RseI | CAYNNNNRTG | 5 cut(s) | 113, 462, 477, 2387, 4174 |
| SalI | GTCGAC | 1 cut(s) | 311 |
| SatI | GCNGC | 9 cut(s) | 93, 915, 1393, 2576, 2862, 3015, 3026, 3099, 3339 |
| Sau96I | GGNCC | 6 cut(s) | 811, 921, 1144, 2337, 3298, 4146 |
| ScaI | AGTACT | 1 cut(s) | 2612 |
| SchI | GAGTC | 5 cut(s) | 318, 367, 1574, 1676, 3854 |
| SduI | GDGCHC | 3 cut(s) | 2634, 2897, 3927 |
| SfaNI | GCATC | 9 cut(s) | 79, 1269, 1455, 2541, 2845, 2868, 3107, 3556, 4097 |
| SfcI | CTRYAG | 5 cut(s) | 1591, 1630, 2212, 2573, 3780 |
| Sfr274I | CTCGAG | 1 cut(s) | 1699 |
| SfuI | TTCGAA | 1 cut(s) | 3986 |
| SinI | GGWCC | 4 cut(s) | 811, 921, 2337, 4146 |
| SlaI | CTCGAG | 1 cut(s) | 1699 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 113, 462, 477, 2387, 4174 |
| SmlI | CTYRAG | 3 cut(s) | 623, 1699, 4141 |
| SmoI | CTYRAG | 3 cut(s) | 623, 1699, 4141 |
| SphI | GCATGC | 2 cut(s) | 1839, 4088 |
| SseBI | AGGCCT | 1 cut(s) | 3060 |
| SsiI | CCGC | 3 cut(s) | 103, 1756, 3547 |
| SspI | AATATT | 4 cut(s) | 546, 2911, 3892, 3980 |
| StuI | AGGCCT | 1 cut(s) | 3060 |
| StyI | CCWWGG | 3 cut(s) | 1736, 2496, 3822 |
| TaiI | ACGT | 3 cut(s) | 724, 2404, 2688 |
| TaqI | TCGA | 8 cut(s) | 312, 797, 1361, 1608, 1638, 1700, 3843, 3986 |
| TatI | WGTACW | 9 cut(s) | 1254, 1686, 2344, 2449, 2474, 2610, 2851, 3345, 3600 |
| TseFI | GTSAC | 3 cut(s) | 2380, 2781, 3621 |
| TseI | GCWGC | 9 cut(s) | 92, 914, 1392, 2575, 2861, 3014, 3025, 3098, 3338 |
| Tsp45I | GTSAC | 3 cut(s) | 2380, 2781, 3621 |
| TspGWI | ACGGA | 4 cut(s) | 51, 1103, 1895, 3461 |
| VneI | GTGCAC | 1 cut(s) | 2893 |
| VpaK11BI | GGWCC | 4 cut(s) | 811, 921, 2337, 4146 |
| VspI | ATTAAT | 1 cut(s) | 1487 |
| XbaI | TCTAGA | 2 cut(s) | 1003, 1448 |
| XceI | RCATGY | 8 cut(s) | 657, 753, 1839, 2185, 2699, 3520, 4088, 4131 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 118, 232, 461, 2926 |
| XhoI | CTCGAG | 1 cut(s) | 1699 |
| XmiI | GTMKAC | 4 cut(s) | 312, 650, 746, 2504 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1224, 1323, 2964, 3088, 4022 |
| ZrmI | AGTACT | 1 cut(s) | 2612 |
| Zsp2I | ATGCAT | 4 cut(s) | 478, 2838, 3996, 4090 |