Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0001073

Physical Location & Seq

Genomic Coordinates Forward (+)

7946455 .. 7950076

Gene Structure 3622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g07520.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGATAAAGACGTAACCCGGAATAAATCTGTTGATCCTCTTGTGGTGGAAGAAACCATACAAGAACTTGGGCGTGAACCATCTGATGATGAACAACCCCGTTATGTCCCAATCGAGCTGGTCAAACCTCCGTGTTCAAATGATGCTAGTGTAATGTATCATTGCTACTTAATTGAGCTGAAACCGAATTTTGATTGCGATATTCCAGTTAGTGATATCGTACTTGGCACGAGGAATGAACTTGATTGTGATACTATTGCAAATATGAATTTTGAATTACAAGTTCAAGGGGGTCCTTTAACAGTAAACTTTAAACATGCTGGAGATGTTAGTCTAAGTTCAGAGCAGGTTCTTGCGTGCAGAAGGTTCCAAATCACAATTTTTAAGATTCTAGTGGATTGCAAATTGAAAAAGTTGGATGAAGTTTTAGAAAGATTTTGTTTGGGACAAAACCATCGGACTGAATTGATTGATTACCTTTTGCTACCGGTAGAAAGGATACACCAGAGACCATCAATCATTGATTTGGAAAGCATTATGTCTATGTCGTCTCTCTGTAACGATGATTCTAAGAATAGTGCTTGTGTAAATTTTCCCCAACCCAACAACAATTCCCATGTTCTGCTACATACCCAAAATGGTATGGTTTGTACTTGCAGGATCCAGAATTCTGTGGTCTATACGCCTCATAACAGTATCCTGTATTGCATCACTGGTCTGTTGGATGACTTGAATGGAAACTCACTGATGAAGGACAGCAAATCTCTTACCTACAAAGCCCACTATGAAGCAAAGCATGGGATCAACCTGTGTTTCGATCAACAGTTATTGTTGAATGGGAGACACATTTTTCGGGTACAAAATTATCTTCTGAAGTGCCGACAACAGACCAAAAAAGAATCAAGTGCTAAATCTGTTGAATTGCCGCCTGAACTTTGTGCTATAATCATGTCACCTATATCAACCAGCAATTTATATTCGTTCTCACTTGTTCCGTCCATCATGCATCGGCTTGAGTCTTTACTACTCTCTGTCAACATGAAACACATGATTTTGGACCATTGCCCTCAAAATATTACTATCCCAACCATCAAGCTATTACCACAAAAGGTTGCCAAGAGAACTTCAATTTGGAATCCTTGGAAACTCTTGGAGATTCCTTTCTTAAGTATGCTGCAAGTCAGCAGCTTTTTAAAACCTATCAAAATGATCGATCGTGAGGGCCTCCTTAGTGTAAATAAGGAAAAAATAATTTCTAATCTTTCCCTTGGCAAGCTTGGATGTGACCGTAAAATTTCGGGTTTTATTCGTGAGGAGAGTTTTGATCCGAAAAAGTGGACTATACCTGGAGATTATTCTGGAAATTATTTCTTAAATGAGGAGTTGCTTTTTAATAAAAGAAGCATTTACGTTGGGGGAACAAGGAAGATCGATACTAAAGGTGTTGGAGATGTAGTTGAGGCACTAATCGGTGCATTTCTTAGCACAGGTGGTGAACTAGATGCCATATATTTCATCAACTGGGTTGGTATAGAGGTGGATTTAGACCACATACGATATGAGAGGCACTTACAAGTGCAGCCGGAGAAGCTCATTGATGTCGGACATTTAGAGTCATTGCTTGACTACAAATTTTGTAATCCTTCTCTTCTCGTGGAAGCGCTAAGCCATGGTTCTTACATGCCAGGAGGTTACCAGCGGCTAGAATTTCTTGGTGATGCTGTGTTGGATTATATGATCACTGCTTATTTTTACTATACGTATCCTGGGATGATGTCGCCAGGATTTTTAACTGATATGAGGTCTGCTTCTGTGAACAACGATTGTTATGCACGATCTGCTGTGAAGGCCGGATTACACGAGCACATTCTTGCTTCGGACATAGTCCACCGAAATATTGACTCTACTGTTAACAATTTTGGATTGCTATCTACAGAATCAACTTTTGGATTTGAATCTGAGACATCCTTCACCACTGTTAGTACCTGCGGATATTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010033 GO:0010216 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051214 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098542 GO:0098586 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

DEAD Dicer_dimer Helicase_C PAZ ResIII Ribonuclease_3 dsrm

Protein Analysis

667

Amino Acids

75.27

Weight (kDa)

5.76

Isoelectric Point (pI)

42.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001073)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03300 AT3G03300 AT3G03300 AT3G03300
fragaria_vesca	FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g00200 FvH4_6g37440 FvH4_6g37440 FvH4_6g37440
malus_domestica	MD04G1247300.v1.1 MD12G1087600.v1.1 MD14G1082600.v1.1 MD14G1082800.v1.1
prunus_persica	Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.6G363600_v2.0.a1 Prupe.7G047700_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G047900_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1 Prupe.7G048000_v2.0.a1
pyrus_communis	pycom04g21800 pycom12g07520 pycom14g07170
rosa_chinensis	RchiOBHm_Chr3g0447571
rosa_laevigata	RLG00000020482 RLG00000025988
rosa_multiflora	Rmu_sc0003550.1_g000007
rosa_roxburghii	Rroxscaffold_5G00355920
rosa_rugosa	Rorug02G0603000 Rorug02G0603100
rosa_samantha	Rh3AG003300 Rh3BG002800 Rh3CG003100 Rh3DG003100
rosa_wichuraiana	Rw3G000220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	337, 1994
AciI	CCGC	3 cut(s)	926, 1699, 1989
AclWI	GGATC	5 cut(s)	29, 655, 668, 809, 1319
AcsI	RAATTY	7 cut(s)	187, 268, 589, 667, 1293, 1631, 1706
AcuI	CTGAAG	1 cut(s)	893
AfaI	GTAC	4 cut(s)	222, 652, 858, 1984
AfeI	AGCGCT	1 cut(s)	1662
AflII	CTTAAG	1 cut(s)	1165
AgeI	ACCGGT	1 cut(s)	487
AgsI	TTSAA	9 cut(s)	138, 275, 287, 409, 733, 835, 920, 1128, 1955
AjnI	CCWGG	4 cut(s)	1345, 1684, 1765, 1780
AjuI	GAANNNNNNNTTGG	4 cut(s)	1114, 1146, 1929, 1961
AluBI	AGCT	6 cut(s)	118, 178, 1096, 1188, 1276, 1591
AluI	AGCT	6 cut(s)	118, 178, 1096, 1188, 1276, 1591
Alw21I	GWGCWC	1 cut(s)	1866
Alw26I	GTCTC	4 cut(s)	502, 555, 835, 1955
AlwI	GGATC	5 cut(s)	29, 655, 668, 809, 1319
Aor51HI	AGCGCT	1 cut(s)	1662
AoxI	GGCC	2 cut(s)	1222, 1848
ApeKI	GCWGC	3 cut(s)	1174, 1185, 1579
ApoI	RAATTY	7 cut(s)	187, 268, 589, 667, 1293, 1631, 1706
ArsI	GACNNNNNNTTYG	2 cut(s)	834, 866
AsiGI	ACCGGT	1 cut(s)	487
AspLEI	GCGC	1 cut(s)	1663
AspS9I	GGNCC	3 cut(s)	293, 1057, 1222
AsuC2I	CCSGG	1 cut(s)	19
AsuHPI	GGTGA	4 cut(s)	945, 1505, 1727, 1963
AvaII	GGWCC	2 cut(s)	293, 1057
BamHI	GGATCC	1 cut(s)	660
BarI	GAAGNNNNNNTAC	2 cut(s)	42, 74
BauI	CACGAG	3 cut(s)	229, 1652, 1859
Bbv12I	GWGCWC	1 cut(s)	1866
BbvI	GCAGC	3 cut(s)	1161, 1197, 1591
BccI	CCATC	5 cut(s)	88, 462, 520, 1007, 1097
BcgI	CGANNNNNNTGC	2 cut(s)	1811, 1845
BciT130I	CCWGG	4 cut(s)	1347, 1686, 1767, 1782
BciVI	GTATCC	3 cut(s)	492, 707, 1773
BclI	TGATCA	1 cut(s)	1737
BcnI	CCSGG	1 cut(s)	19
BcoDI	GTCTC	4 cut(s)	502, 555, 835, 1955
BfaI	CTAG	4 cut(s)	147, 392, 1499, 1703
BfmI	CTRYAG	1 cut(s)	1932
BfoI	RGCGCY	1 cut(s)	1664
BfrI	CTTAAG	1 cut(s)	1165
BfuAI	ACCTGC	2 cut(s)	337, 1994
BfuI	GTATCC	3 cut(s)	492, 707, 1773
BisI	GCNGC	5 cut(s)	926, 1175, 1186, 1580, 1700
BlpI	GCTNAGC	1 cut(s)	1664
BlsI	GCNGC	5 cut(s)	927, 1176, 1187, 1581, 1701
Bme1390I	CCNGG	5 cut(s)	19, 1347, 1686, 1767, 1782
Bme18I	GGWCC	2 cut(s)	293, 1057
BmgT120I	GGNCC	3 cut(s)	293, 1057, 1222
BmiI	GGNNCC	3 cut(s)	294, 368, 662
BmrFI	CCNGG	5 cut(s)	19, 1347, 1686, 1767, 1782
BmrI	ACTGGG	1 cut(s)	1531
BmsI	GCATC	5 cut(s)	133, 717, 1015, 1492, 1708
BmuI	ACTGGG	1 cut(s)	1531
BpmI	CTGGAG	2 cut(s)	342, 1368
Bpu1102I	GCTNAGC	1 cut(s)	1664
BpuEI	CTTGAG	1 cut(s)	1034
BpuMI	CCSGG	1 cut(s)	19
Bsa29I	ATCGAT	2 cut(s)	1212, 1431
BsaAI	YACGTR	1 cut(s)	1761
BsaBI	GATNNNNATC	2 cut(s)	1927, 1954
BsaI	GGTCTC	1 cut(s)	502
BsaJI	CCNNGG	4 cut(s)	1139, 1267, 1669, 1766
BsaWI	WCCGGW	1 cut(s)	487
BsaXI	ACNNNNNCTCC	2 cut(s)	1440, 1470
Bse118I	RCCGGY	1 cut(s)	487
Bse1I	ACTGG	3 cut(s)	206, 718, 1526
Bse3DI	GCAATG	3 cut(s)	160, 1060, 1616
Bse8I	GATNNNNATC	2 cut(s)	1927, 1954
BseBI	CCWGG	4 cut(s)	1347, 1686, 1767, 1782
BseCI	ATCGAT	2 cut(s)	1212, 1431
BseDI	CCNNGG	4 cut(s)	1139, 1267, 1669, 1766
BseGI	GGATG	5 cut(s)	424, 730, 1286, 1776, 1964
BseJI	GATNNNNATC	2 cut(s)	1927, 1954
BseMI	GCAATG	3 cut(s)	160, 1060, 1616
BseMII	CTCAG	1 cut(s)	1950
BseNI	ACTGG	3 cut(s)	206, 718, 1526
BseRI	GAGGAG	2 cut(s)	1328, 1394
BseXI	GCAGC	3 cut(s)	1161, 1197, 1591
BsgI	GTGCAG	2 cut(s)	379, 1598
Bsh1285I	CGRYCG	1 cut(s)	1216
BshFI	GGCC	2 cut(s)	1224, 1850
BshTI	ACCGGT	1 cut(s)	487
BshVI	ATCGAT	2 cut(s)	1212, 1431
BsiEI	CGRYCG	1 cut(s)	1216
BsiHKAI	GWGCWC	1 cut(s)	1866
BsiSI	CCGG	4 cut(s)	19, 488, 1583, 1851
BslFI	GGGAC	2 cut(s)	92, 459
BsmAI	GTCTC	4 cut(s)	502, 555, 835, 1955
BsmBI	CGTCTC	1 cut(s)	555
BsmFI	GGGAC	2 cut(s)	92, 459
BsnI	GGCC	2 cut(s)	1224, 1850
Bso31I	GGTCTC	1 cut(s)	502
Bsp1286I	GDGCHC	1 cut(s)	1866
Bsp1720I	GCTNAGC	1 cut(s)	1664
Bsp19I	CCATGG	1 cut(s)	1669
BspACI	CCGC	3 cut(s)	926, 1699, 1989
BspANI	GGCC	2 cut(s)	1224, 1850
BspCNI	CTCAG	1 cut(s)	1951
BspDI	ATCGAT	2 cut(s)	1212, 1431
BspLI	GGNNCC	3 cut(s)	294, 368, 662
BspMI	ACCTGC	2 cut(s)	337, 1994
BspPI	GGATC	5 cut(s)	29, 655, 668, 809, 1319
BspTI	CTTAAG	1 cut(s)	1165
BspTNI	GGTCTC	1 cut(s)	502
BsrDI	GCAATG	3 cut(s)	160, 1060, 1616
BsrFI	RCCGGY	1 cut(s)	487
BsrI	ACTGG	3 cut(s)	206, 718, 1526
BssAI	RCCGGY	1 cut(s)	487
BssECI	CCNNGG	4 cut(s)	1139, 1267, 1669, 1766
BssSI	CACGAG	3 cut(s)	229, 1652, 1859
BssT1I	CCWWGG	3 cut(s)	1139, 1267, 1669
Bst2BI	CACGAG	3 cut(s)	229, 1652, 1859
Bst2UI	CCWGG	4 cut(s)	1347, 1686, 1767, 1782
Bst4CI	ACNGT	6 cut(s)	304, 695, 825, 1289, 1909, 1978
Bst6I	CTCTTC	1 cut(s)	1653
BstAFI	CTTAAG	1 cut(s)	1165
BstAPI	GCANNNNNTGC	1 cut(s)	1838
BstBAI	YACGTR	1 cut(s)	1761
BstC8I	GCNNGC	2 cut(s)	358, 1274
BstDEI	CTNAG	6 cut(s)	335, 570, 1229, 1481, 1664, 1959
BstDSI	CCRYGG	1 cut(s)	1669
BstEII	GGTNACC	1 cut(s)	1691
BstF5I	GGATG	5 cut(s)	424, 730, 1286, 1776, 1964
BstH2I	RGCGCY	1 cut(s)	1664
BstHHI	GCGC	1 cut(s)	1663
BstMAI	GTCTC	4 cut(s)	502, 555, 835, 1955
BstMCI	CGRYCG	1 cut(s)	1216
BstMWI	GCNNNNNNNGC	3 cut(s)	1588, 1838, 1847
BstNI	CCWGG	4 cut(s)	1347, 1686, 1767, 1782
BstNSI	RCATGY	2 cut(s)	320, 1684
BstPI	GGTNACC	1 cut(s)	1691
BstSCI	CCNGG	5 cut(s)	17, 1345, 1684, 1765, 1780
BstSFI	CTRYAG	1 cut(s)	1932
BstSNI	TACGTA	1 cut(s)	1761
BstV1I	GCAGC	3 cut(s)	1161, 1197, 1591
BstX2I	RGATCY	1 cut(s)	660
BstYI	RGATCY	1 cut(s)	660
Bsu15I	ATCGAT	2 cut(s)	1212, 1431
BsuI	GTATCC	3 cut(s)	492, 707, 1773
BsuRI	GGCC	2 cut(s)	1224, 1850
BsuTUI	ATCGAT	2 cut(s)	1212, 1431
BtgI	CCRYGG	1 cut(s)	1669
BtsCI	GGATG	5 cut(s)	424, 730, 1286, 1776, 1964
BtsI	GCAGTG	1 cut(s)	1740
BtsIMutI	CAGTG	4 cut(s)	711, 743, 1740, 1974
BveI	ACCTGC	2 cut(s)	337, 1994
Cac8I	GCNNGC	2 cut(s)	358, 1274
CfoI	GCGC	1 cut(s)	1663
Cfr10I	RCCGGY	1 cut(s)	487
Cfr13I	GGNCC	3 cut(s)	293, 1057, 1222
ClaI	ATCGAT	2 cut(s)	1212, 1431
Csp6I	GTAC	4 cut(s)	221, 651, 857, 1983
CspAI	ACCGGT	1 cut(s)	487
CviAII	CATG	9 cut(s)	317, 617, 797, 949, 1003, 1039, 1048, 1670, 1681
CviQI	GTAC	4 cut(s)	221, 651, 857, 1983
DdeI	CTNAG	6 cut(s)	335, 570, 1229, 1481, 1664, 1959
DraI	TTTAAA	2 cut(s)	313, 1194
Eam1104I	CTCTTC	1 cut(s)	1653
EarI	CTCTTC	1 cut(s)	1653
Eco105I	TACGTA	1 cut(s)	1761
Eco130I	CCWWGG	3 cut(s)	1139, 1267, 1669
Eco31I	GGTCTC	1 cut(s)	502
Eco32I	GATATC	1 cut(s)	217
Eco47I	GGWCC	2 cut(s)	293, 1057
Eco47III	AGCGCT	1 cut(s)	1662
Eco57I	CTGAAG	1 cut(s)	893
Eco91I	GGTNACC	1 cut(s)	1691
EcoO109I	RGGNCCY	2 cut(s)	293, 1222
EcoO65I	GGTNACC	1 cut(s)	1691
EcoRI	GAATTC	1 cut(s)	667
EcoRII	CCWGG	4 cut(s)	1345, 1684, 1765, 1780
EcoRV	GATATC	1 cut(s)	217
EcoT14I	CCWWGG	3 cut(s)	1139, 1267, 1669
EcoT22I	ATGCAT	1 cut(s)	1008
ErhI	CCWWGG	3 cut(s)	1139, 1267, 1669
Esp3I	CGTCTC	1 cut(s)	555
FaeI	CATG	9 cut(s)	320, 620, 800, 952, 1006, 1042, 1051, 1673, 1684
FaqI	GGGAC	2 cut(s)	92, 459
FatI	CATG	9 cut(s)	316, 616, 796, 948, 1002, 1038, 1047, 1669, 1680
FbaI	TGATCA	1 cut(s)	1737
Fnu4HI	GCNGC	5 cut(s)	926, 1175, 1186, 1580, 1700
FokI	GGATG	5 cut(s)	431, 737, 1293, 1783, 1951
Fsp4HI	GCNGC	5 cut(s)	926, 1175, 1186, 1580, 1700
FspBI	CTAG	4 cut(s)	147, 392, 1499, 1703
GlaI	GCGC	1 cut(s)	1662
GluI	GCNGC	5 cut(s)	926, 1175, 1186, 1580, 1700
GsuI	CTGGAG	2 cut(s)	342, 1368
HaeII	RGCGCY	1 cut(s)	1664
HaeIII	GGCC	2 cut(s)	1224, 1850
HapII	CCGG	4 cut(s)	19, 488, 1583, 1851
HhaI	GCGC	1 cut(s)	1663
Hin1II	CATG	9 cut(s)	320, 620, 800, 952, 1006, 1042, 1051, 1673, 1684
Hin6I	GCGC	1 cut(s)	1661
HinP1I	GCGC	1 cut(s)	1661
HincII	GTYRAC	2 cut(s)	1036, 1912
HindII	GTYRAC	2 cut(s)	1036, 1912
HindIII	AAGCTT	1 cut(s)	1274
HpaI	GTTAAC	1 cut(s)	1912
HpaII	CCGG	4 cut(s)	19, 488, 1583, 1851
HphI	GGTGA	4 cut(s)	945, 1505, 1727, 1963
Hpy166II	GTNNAC	8 cut(s)	77, 307, 1036, 1338, 1496, 1816, 1888, 1912
Hpy188I	TCNGA	8 cut(s)	85, 343, 459, 873, 1329, 1604, 1879, 1960
Hpy188III	TCNNGA	4 cut(s)	664, 1217, 1310, 1359
Hpy8I	GTNNAC	8 cut(s)	77, 307, 1036, 1338, 1496, 1816, 1888, 1912
HpyAV	CCTTC	5 cut(s)	357, 745, 1653, 1840, 1978
HpyCH4III	ACNGT	6 cut(s)	304, 695, 825, 1289, 1909, 1978
HpyCH4IV	ACGT	3 cut(s)	12, 1410, 1760
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1588, 1838, 1847
HpyF3I	CTNAG	6 cut(s)	335, 570, 1229, 1481, 1664, 1959
HpySE526I	ACGT	3 cut(s)	12, 1410, 1760
Hsp92II	CATG	9 cut(s)	320, 620, 800, 952, 1006, 1042, 1051, 1673, 1684
HspAI	GCGC	1 cut(s)	1661
Ksp22I	TGATCA	1 cut(s)	1737
KspAI	GTTAAC	1 cut(s)	1912
Lsp1109I	GCAGC	3 cut(s)	1161, 1197, 1591
LweI	GCATC	5 cut(s)	133, 717, 1015, 1492, 1708
MaeI	CTAG	4 cut(s)	147, 392, 1499, 1703
MaeII	ACGT	3 cut(s)	12, 1410, 1760
MaeIII	GTNAC	5 cut(s)	13, 557, 951, 1283, 1691
MboII	GAAGA	4 cut(s)	62, 860, 1438, 1640
MflI	RGATCY	1 cut(s)	660
MhlI	GDGCHC	1 cut(s)	1866
MlyI	GAGTC	3 cut(s)	1025, 1622, 1895
MmeI	TCCRAC	5 cut(s)	396, 702, 1426, 1582, 1707
Mph1103I	ATGCAT	1 cut(s)	1008
MspA1I	CMGCKG	1 cut(s)	1699
MspCI	CTTAAG	1 cut(s)	1165
MspI	CCGG	4 cut(s)	19, 488, 1583, 1851
MspR9I	CCNGG	5 cut(s)	19, 1347, 1686, 1767, 1782
MvaI	CCWGG	4 cut(s)	1347, 1686, 1767, 1782
MwoI	GCNNNNNNNGC	3 cut(s)	1588, 1838, 1847
NciI	CCSGG	1 cut(s)	19
NcoI	CCATGG	1 cut(s)	1669
NlaIII	CATG	9 cut(s)	320, 620, 800, 952, 1006, 1042, 1051, 1673, 1684
NlaIV	GGNNCC	3 cut(s)	294, 368, 662
NmuCI	GTSAC	2 cut(s)	951, 1283
NsiI	ATGCAT	1 cut(s)	1008
NspI	RCATGY	2 cut(s)	320, 1684
PfeI	GAWTC	7 cut(s)	388, 566, 899, 1135, 1156, 1937, 1955
PflFI	GACNNNGTC	1 cut(s)	1883
PinAI	ACCGGT	1 cut(s)	487
PkrI	GCNGC	5 cut(s)	927, 1176, 1187, 1581, 1701
Ple19I	CGATCG	1 cut(s)	1216
PleI	GAGTC	3 cut(s)	1024, 1621, 1895
PpsI	GAGTC	3 cut(s)	1024, 1621, 1895
Ppu21I	YACGTR	1 cut(s)	1761
PpuMI	RGGWCCY	1 cut(s)	293
Psp5II	RGGWCCY	1 cut(s)	293
Psp6I	CCWGG	4 cut(s)	1345, 1684, 1765, 1780
PspEI	GGTNACC	1 cut(s)	1691
PspGI	CCWGG	4 cut(s)	1345, 1684, 1765, 1780
PspN4I	GGNNCC	3 cut(s)	294, 368, 662
PspPI	GGNCC	3 cut(s)	293, 1057, 1222
PspPPI	RGGWCCY	1 cut(s)	293
PsuI	RGATCY	1 cut(s)	660
PsyI	GACNNNGTC	1 cut(s)	1883
PvuI	CGATCG	1 cut(s)	1216
RsaI	GTAC	4 cut(s)	222, 652, 858, 1984
RsaNI	GTAC	4 cut(s)	221, 651, 857, 1983
SatI	GCNGC	5 cut(s)	926, 1175, 1186, 1580, 1700
Sau96I	GGNCC	3 cut(s)	293, 1057, 1222
SchI	GAGTC	3 cut(s)	1025, 1622, 1895
ScrFI	CCNGG	5 cut(s)	19, 1347, 1686, 1767, 1782
SduI	GDGCHC	1 cut(s)	1866
SfaNI	GCATC	5 cut(s)	133, 717, 1015, 1492, 1708
SfcI	CTRYAG	1 cut(s)	1932
SinI	GGWCC	2 cut(s)	293, 1057
SmlI	CTYRAG	2 cut(s)	1013, 1165
SmoI	CTYRAG	2 cut(s)	1013, 1165
SnaBI	TACGTA	1 cut(s)	1761
SsiI	CCGC	3 cut(s)	926, 1699, 1989
SspI	AATATT	2 cut(s)	1075, 1897
SspMI	CTAG	4 cut(s)	147, 392, 1499, 1703
StyD4I	CCNGG	5 cut(s)	17, 1345, 1684, 1765, 1780
StyI	CCWWGG	3 cut(s)	1139, 1267, 1669
TaaI	ACNGT	6 cut(s)	304, 695, 825, 1289, 1909, 1978
TaiI	ACGT	3 cut(s)	15, 1413, 1763
TaqI	TCGA	4 cut(s)	114, 816, 1212, 1431
TatI	WGTACW	1 cut(s)	650
TauI	GCSGC	2 cut(s)	928, 1702
TfiI	GAWTC	7 cut(s)	388, 566, 899, 1135, 1156, 1937, 1955
TscAI	CASTG	4 cut(s)	718, 750, 1747, 1981
TseFI	GTSAC	2 cut(s)	951, 1283
TseI	GCWGC	3 cut(s)	1174, 1185, 1579
Tsp45I	GTSAC	2 cut(s)	951, 1283
TspDTI	ATGAA	8 cut(s)	105, 252, 281, 435, 764, 801, 1055, 1504
TspGWI	ACGGA	2 cut(s)	120, 984
TspRI	CASTG	4 cut(s)	718, 750, 1747, 1981
Tth111I	GACNNNGTC	1 cut(s)	1883
Vha464I	CTTAAG	1 cut(s)	1165
VpaK11BI	GGWCC	2 cut(s)	293, 1057
XapI	RAATTY	7 cut(s)	187, 268, 589, 667, 1293, 1631, 1706
XceI	RCATGY	2 cut(s)	320, 1684
XspI	CTAG	4 cut(s)	147, 392, 1499, 1703
Zsp2I	ATGCAT	1 cut(s)	1008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.