Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0001056

Physical Location & Seq

Genomic Coordinates Forward (+)

13477922 .. 13485195

Gene Structure 7274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1096400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGGGCAGTAGAAGAGTGAAAGTTGGTGCAAATGATGGTAGTAAAGTTGTGACCGATATGCCGAGCTTTGTTCCTCCAGTACCCACTCCCAATCCCACTGGCACAGAGGGGAGCTCCATTCGTTCATCTCAAATTTCAGACTTTGGAACTCTTGAGCAAACTCTTGGATTTCGCATAGAGGATGCCGTTGACATCGGGAGAAGTCCAATGTTTAGTCAAAACAAGTTAAATCGCCAGGCAGTGGGAAGTAGTGTTGCCCAATTTGGTGCTTTAAACAAGCTTATGCCACTGCAAAAAGAGCCACAGCCAAATTTGCTCTCTGTATCACGTAGCAATCACGAGAACTGGGGGGAGTCCAATATGGCAGATGGAAGCCCCAGGACTGATACTTCAACAGATGACACAGAAGATAAAAATCAGAAGATTGAAAGGAATCAAATGACTGCTCTTCTAGCTTCTGATTCCAGTGACAGATCAAAAGAAAAATCTGGGGATCAAAAGACATTACGAAGACTAGCTCAAAATCGTGAAGCTGCCAGGAAAAGCAGATTACGGAAAAAAGCATATGTACAACAACTTGAGAGTAGTCGGCTGAAATTAACTCAGCTCGAGCAAGAGCTTCAGCGTGCCCGTCAGCAGGGAATATTCATTTCAAGCTCTGGAGATCAATCGCATTCAATGAGTGGAAATGGTGCTTTGGCATTTGATGTGGAATATGCAAGGTGGCTAGAAGAGCACAACAGGCAAATAAATGAGTTGAGGGCTGCCGTTAATTCACATGCGGGTGACACTGAACTTCGTACTGTTATTGACAACGTCATTGCGCACTACAATGACATTTTTAGACTAAAGGGAACTGCAGCAAAAGCTGATGTTTTCCACATCTTATCAGGAATGTGGAAGACACCAGCTGAAAGGTGTTTCATGTGGATTGGCGGCTTCCGCTCATCTGAGCTCCTTAAGCTTCTGGTGAGTCAATTGGAACCCTTAACGGAGCAGCAATTGGTAGGTATTTATAACCTGCAGCAATCATCCCAGCAGGCTGAAGATGCTCTGTCACAAGGGATGGAGGCATTGCAGCAATCCCTGTCTGAGACCTTGGCAAGTGGCTCACCTGCGCCATCAGGATCATCTGGGAATGTAGCAAACTATATGGGTCAAATGGCCATGGCCATGGGAAAGCTAGGAACTCTTGATGGGTTCCTCCGCCAGGCTGATAATCTTCGGCAACAAACATTGCAACAAATGCATCGTATACTGACAACTCGTCAATCAGCTCGTGCACTCCTTGCAATAAATGATTATTTTTCACGTCTTCGAGCCCTCAGTTCTCTATGGCTTGCCAGGCCTAGGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DOG1 bZIP_1 bZIP_2

Protein Analysis

453

Amino Acids

50.06

Weight (kDa)

9.19

Isoelectric Point (pI)

64.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_1	PF00170	167 - 207	4.2e-07	bZIP transcription factor
DOG1	PF14144	249 - 325	1.2e-32	Seed dormancy control

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT5G06950 AT5G06950 AT5G06950 AT5G06950 AT5G06950 AT5G06960 AT5G06960 AT5G06960
fragaria_vesca	FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_7g03530
malus_domestica	MD02G1279400.v1.1 MD07G1047300.v1.1 MD12G1096400.v1.1 MD14G1089200.v1.1
prunus_persica	Prupe.2G041300_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1
pyrus_communis	pycom02g23960 pycom07g03420 pycom12g08570 pycom14g07870
rosa_chinensis	RchiOBHm_Chr1g0325831 RchiOBHm_Chr2g0125681
rosa_laevigata	RLG00000018877 RLG00000030099
rosa_multiflora	Rmu_sc0013657.1_g000002 Rmu_ssc0000055.1_g000021
rosa_roxburghii	Rroxscaffold_2G00117830 Rroxscaffold_4G00324240
rosa_rugosa	Rorug01G0055400 Rorug02G0258500 Rorug02G0258600.1 Rorug02G0258700 Rorug02G0258700 Rorug02G0258700
rosa_samantha	Rh1AG071800 Rh1BG058700 Rh1CG071100 Rh1DG075900 Rh2AG317000 Rh2BG324900 Rh2CG306800
rosa_wichuraiana	Rw1G005840 Rw2G025630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1017
AarI	CACCTGC	1 cut(s)	1123
Acc16I	TGCGCA	1 cut(s)	825
Acc36I	ACCTGC	2 cut(s)	1029, 1123
AccB7I	CCANNNNNTGG	1 cut(s)	241
AccBSI	CCGCTC	1 cut(s)	945
AccI	GTMKAC	1 cut(s)	1255
AciI	CCGC	4 cut(s)	782, 936, 943, 1207
AclWI	GGATC	2 cut(s)	501, 1135
AcoI	YGGCCR	2 cut(s)	1164, 1170
AcsI	RAATTY	2 cut(s)	132, 310
AcuI	CTGAAG	2 cut(s)	605, 1065
AfaI	GTAC	3 cut(s)	81, 570, 802
AfiI	CCNNNNNNNGG	4 cut(s)	241, 637, 1210, 1350
AflII	CTTAAG	1 cut(s)	959
AgsI	TTSAA	4 cut(s)	393, 428, 654, 678
AhdI	GACNNNNNGTC	1 cut(s)	1266
AjiI	CACGTC	1 cut(s)	1313
AjnI	CCWGG	5 cut(s)	234, 377, 536, 1209, 1343
Alw21I	GWGCWC	4 cut(s)	116, 738, 957, 1285
Alw26I	GTCTC	1 cut(s)	1088
Alw44I	GTGCAC	1 cut(s)	1281
AlwI	GGATC	2 cut(s)	501, 1135
Ama87I	CYCGRG	1 cut(s)	608
AoxI	GGCC	3 cut(s)	1164, 1170, 1346
ApaLI	GTGCAC	1 cut(s)	1281
ApeKI	GCWGC	6 cut(s)	533, 764, 860, 997, 1024, 1078
ApoI	RAATTY	2 cut(s)	132, 310
AspA2I	CCTAGG	1 cut(s)	1349
AspLEI	GCGC	2 cut(s)	826, 1120
AsuHPI	GGTGA	3 cut(s)	797, 982, 1104
AvaI	CYCGRG	1 cut(s)	608
AvrII	CCTAGG	1 cut(s)	1349
BaeGI	GKGCMC	2 cut(s)	631, 1285
BalI	TGGCCA	2 cut(s)	1166, 1172
BanII	GRGCYC	3 cut(s)	116, 957, 1324
BauI	CACGAG	2 cut(s)	338, 1278
BbsI	GAAGAC	3 cut(s)	517, 908, 1307
Bbv12I	GWGCWC	4 cut(s)	116, 738, 957, 1285
BbvI	GCAGC	6 cut(s)	520, 751, 872, 1009, 1036, 1090
BccI	CCATC	5 cut(s)	29, 362, 1060, 1129, 1190
BceAI	ACGGC	2 cut(s)	170, 752
BciT130I	CCWGG	5 cut(s)	236, 379, 538, 1211, 1345
BcoDI	GTCTC	1 cut(s)	1088
BfaI	CTAG	5 cut(s)	452, 515, 728, 1184, 1350
BfmI	CTRYAG	2 cut(s)	858, 1022
BfrI	CTTAAG	1 cut(s)	959
BfuAI	ACCTGC	2 cut(s)	1029, 1123
BisI	GCNGC	7 cut(s)	534, 765, 861, 937, 998, 1025, 1079
BlnI	CCTAGG	1 cut(s)	1349
BlsI	GCNGC	7 cut(s)	535, 766, 862, 938, 999, 1026, 1080
Bme1390I	CCNGG	5 cut(s)	236, 379, 538, 1211, 1345
BmeRI	GACNNNNNGTC	1 cut(s)	1266
BmeT110I	CYCGRG	1 cut(s)	608
BmgBI	CACGTC	1 cut(s)	1313
BmiI	GGNNCC	2 cut(s)	984, 1202
BmrFI	CCNGG	5 cut(s)	236, 379, 538, 1211, 1345
BmrI	ACTGGG	1 cut(s)	355
BmsI	GCATC	3 cut(s)	172, 1039, 1258
BmuI	ACTGGG	1 cut(s)	355
BpiI	GAAGAC	3 cut(s)	517, 908, 1307
BplI	GAGNNNNNCTC	2 cut(s)	98, 130
BpmI	CTGGAG	2 cut(s)	60, 681
BpuEI	CTTGAG	2 cut(s)	173, 599
BsaAI	YACGTR	1 cut(s)	329
BsaBI	GATNNNNATC	1 cut(s)	414
BsaI	GGTCTC	1 cut(s)	1088
BsaJI	CCNNGG	5 cut(s)	377, 1098, 1167, 1173, 1349
Bsc4I	CCNNNNNNNGG	4 cut(s)	241, 637, 1210, 1350
Bse1I	ACTGG	4 cut(s)	77, 103, 350, 465
Bse3DI	GCAATG	3 cut(s)	819, 1073, 1235
Bse8I	GATNNNNATC	1 cut(s)	414
BseBI	CCWGG	5 cut(s)	236, 379, 538, 1211, 1345
BseDI	CCNNGG	5 cut(s)	377, 1098, 1167, 1173, 1349
BseGI	GGATG	3 cut(s)	187, 1031, 1071
BseJI	GATNNNNATC	1 cut(s)	414
BseLI	CCNNNNNNNGG	4 cut(s)	241, 637, 1210, 1350
BseMI	GCAATG	3 cut(s)	819, 1073, 1235
BseMII	CTCAG	4 cut(s)	617, 942, 1083, 1339
BseNI	ACTGG	4 cut(s)	77, 103, 350, 465
BseSI	GKGCMC	2 cut(s)	631, 1285
BseXI	GCAGC	6 cut(s)	520, 751, 872, 1009, 1036, 1090
BseYI	CCCAGC	1 cut(s)	1035
BshFI	GGCC	3 cut(s)	1166, 1172, 1348
BsiHKAI	GWGCWC	4 cut(s)	116, 738, 957, 1285
BsiHKCI	CYCGRG	1 cut(s)	608
BslI	CCNNNNNNNGG	4 cut(s)	241, 637, 1210, 1350
BsmAI	GTCTC	1 cut(s)	1088
BsmI	GAATGC	1 cut(s)	673
BsnI	GGCC	3 cut(s)	1166, 1172, 1348
Bso31I	GGTCTC	1 cut(s)	1088
BsoBI	CYCGRG	1 cut(s)	608
Bsp1286I	GDGCHC	6 cut(s)	116, 631, 738, 957, 1285, 1324
Bsp1407I	TGTACA	1 cut(s)	568
Bsp143I	GATC	4 cut(s)	473, 493, 664, 1127
Bsp19I	CCATGG	2 cut(s)	1167, 1173
BspACI	CCGC	4 cut(s)	782, 936, 943, 1207
BspANI	GGCC	3 cut(s)	1166, 1172, 1348
BspCNI	CTCAG	4 cut(s)	616, 943, 1084, 1338
BspLI	GGNNCC	2 cut(s)	984, 1202
BspMAI	CTGCAG	2 cut(s)	862, 1026
BspMI	ACCTGC	2 cut(s)	1029, 1123
BspPI	GGATC	2 cut(s)	501, 1135
BspQI	GCTCTTC	2 cut(s)	453, 726
BspTI	CTTAAG	1 cut(s)	959
BspTNI	GGTCTC	1 cut(s)	1088
BsrBI	CCGCTC	1 cut(s)	945
BsrDI	GCAATG	3 cut(s)	819, 1073, 1235
BsrGI	TGTACA	1 cut(s)	568
BsrI	ACTGG	4 cut(s)	77, 103, 350, 465
BssECI	CCNNGG	5 cut(s)	377, 1098, 1167, 1173, 1349
BssMI	GATC	4 cut(s)	473, 493, 664, 1127
BssNAI	GTATAC	1 cut(s)	1256
BssSI	CACGAG	2 cut(s)	338, 1278
BssT1I	CCWWGG	4 cut(s)	1098, 1167, 1173, 1349
Bst1107I	GTATAC	1 cut(s)	1256
Bst2BI	CACGAG	2 cut(s)	338, 1278
Bst2UI	CCWGG	5 cut(s)	236, 379, 538, 1211, 1345
Bst4CI	ACNGT	1 cut(s)	805
Bst6I	CTCTTC	3 cut(s)	7, 453, 726
BstAFI	CTTAAG	1 cut(s)	959
BstAPI	GCANNNNNTGC	2 cut(s)	1246, 1289
BstAUI	TGTACA	1 cut(s)	568
BstBAI	YACGTR	1 cut(s)	329
BstC8I	GCNNGC	3 cut(s)	627, 1041, 1341
BstDEI	CTNAG	4 cut(s)	603, 951, 1092, 1325
BstDSI	CCRYGG	2 cut(s)	1167, 1173
BstENI	CCTNNNNNAGG	1 cut(s)	1208
BstF5I	GGATG	3 cut(s)	187, 1031, 1071
BstHHI	GCGC	2 cut(s)	826, 1120
BstKTI	GATC	4 cut(s)	476, 496, 667, 1130
BstMAI	GTCTC	1 cut(s)	1088
BstMBI	GATC	4 cut(s)	473, 493, 664, 1127
BstNI	CCWGG	5 cut(s)	236, 379, 538, 1211, 1345
BstNSI	RCATGY	1 cut(s)	782
BstSCI	CCNGG	5 cut(s)	234, 377, 536, 1209, 1343
BstSFI	CTRYAG	2 cut(s)	858, 1022
BstSLI	GKGCMC	2 cut(s)	631, 1285
BstV1I	GCAGC	6 cut(s)	520, 751, 872, 1009, 1036, 1090
BstV2I	GAAGAC	3 cut(s)	517, 908, 1307
BstXI	CCANNNNNNTGG	1 cut(s)	1174
BstZ17I	GTATAC	1 cut(s)	1256
BsuRI	GGCC	3 cut(s)	1166, 1172, 1348
BtgI	CCRYGG	2 cut(s)	1167, 1173
BtrI	CACGTC	1 cut(s)	1313
BtsCI	GGATG	3 cut(s)	187, 1031, 1071
BtsI	GCAGTG	2 cut(s)	246, 287
BtsIMutI	CAGTG	5 cut(s)	96, 246, 287, 472, 789
BveI	ACCTGC	2 cut(s)	1029, 1123
Cac8I	GCNNGC	3 cut(s)	627, 1041, 1341
CfoI	GCGC	2 cut(s)	826, 1120
Csp6I	GTAC	3 cut(s)	80, 569, 801
CviAII	CATG	4 cut(s)	779, 925, 1168, 1174
CviQI	GTAC	3 cut(s)	80, 569, 801
DdeI	CTNAG	4 cut(s)	603, 951, 1092, 1325
DpnI	GATC	4 cut(s)	475, 495, 666, 1129
DpnII	GATC	4 cut(s)	473, 493, 664, 1127
DraI	TTTAAA	1 cut(s)	273
DriI	GACNNNNNGTC	1 cut(s)	1266
EaeI	YGGCCR	2 cut(s)	1164, 1170
Eam1104I	CTCTTC	3 cut(s)	7, 453, 726
Eam1105I	GACNNNNNGTC	1 cut(s)	1266
EarI	CTCTTC	3 cut(s)	7, 453, 726
EciI	GGCGGA	1 cut(s)	1196
Ecl136II	GAGCTC	2 cut(s)	114, 955
Eco130I	CCWWGG	4 cut(s)	1098, 1167, 1173, 1349
Eco147I	AGGCCT	1 cut(s)	1348
Eco24I	GRGCYC	3 cut(s)	116, 957, 1324
Eco31I	GGTCTC	1 cut(s)	1088
Eco53kI	GAGCTC	2 cut(s)	114, 955
Eco57I	CTGAAG	2 cut(s)	605, 1065
Eco88I	CYCGRG	1 cut(s)	608
EcoICRI	GAGCTC	2 cut(s)	114, 955
EcoNI	CCTNNNNNAGG	1 cut(s)	1208
EcoRII	CCWGG	5 cut(s)	234, 377, 536, 1209, 1343
EcoT14I	CCWWGG	4 cut(s)	1098, 1167, 1173, 1349
EcoT22I	ATGCAT	1 cut(s)	1251
EcoT38I	GRGCYC	3 cut(s)	116, 957, 1324
ErhI	CCWWGG	4 cut(s)	1098, 1167, 1173, 1349
FaeI	CATG	4 cut(s)	782, 928, 1171, 1177
FatI	CATG	4 cut(s)	778, 924, 1167, 1173
FauI	CCCGC	1 cut(s)	775
FauNDI	CATATG	1 cut(s)	565
FblI	GTMKAC	1 cut(s)	1255
Fnu4HI	GCNGC	7 cut(s)	534, 765, 861, 937, 998, 1025, 1079
FokI	GGATG	3 cut(s)	194, 1018, 1078
FriOI	GRGCYC	3 cut(s)	116, 957, 1324
Fsp4HI	GCNGC	7 cut(s)	534, 765, 861, 937, 998, 1025, 1079
FspBI	CTAG	5 cut(s)	452, 515, 728, 1184, 1350
FspI	TGCGCA	1 cut(s)	825
GlaI	GCGC	2 cut(s)	825, 1119
GluI	GCNGC	7 cut(s)	534, 765, 861, 937, 998, 1025, 1079
GsaI	CCCAGC	1 cut(s)	1039
GsuI	CTGGAG	2 cut(s)	60, 681
HaeIII	GGCC	3 cut(s)	1166, 1172, 1348
HhaI	GCGC	2 cut(s)	826, 1120
Hin1II	CATG	4 cut(s)	782, 928, 1171, 1177
Hin6I	GCGC	2 cut(s)	824, 1118
HinP1I	GCGC	2 cut(s)	824, 1118
HincII	GTYRAC	1 cut(s)	190
HindII	GTYRAC	1 cut(s)	190
HindIII	AAGCTT	2 cut(s)	278, 962
HinfI	GANTC	4 cut(s)	353, 433, 461, 973
HphI	GGTGA	3 cut(s)	797, 982, 1104
Hpy166II	GTNNAC	3 cut(s)	190, 1256, 1283
Hpy188I	TCNGA	5 cut(s)	139, 420, 460, 952, 1093
Hpy188III	TCNNGA	8 cut(s)	152, 196, 338, 527, 660, 891, 1125, 1193
Hpy8I	GTNNAC	3 cut(s)	190, 1256, 1283
HpyCH4III	ACNGT	1 cut(s)	805
HpyCH4IV	ACGT	3 cut(s)	328, 816, 1312
HpyF3I	CTNAG	4 cut(s)	603, 951, 1092, 1325
HpySE526I	ACGT	3 cut(s)	328, 816, 1312
Hsp92II	CATG	4 cut(s)	782, 928, 1171, 1177
HspAI	GCGC	2 cut(s)	824, 1118
Kzo9I	GATC	4 cut(s)	473, 493, 664, 1127
LguI	GCTCTTC	2 cut(s)	453, 726
LmnI	GCTCC	4 cut(s)	111, 119, 960, 994
Lsp1109I	GCAGC	6 cut(s)	520, 751, 872, 1009, 1036, 1090
LweI	GCATC	3 cut(s)	172, 1039, 1258
MaeI	CTAG	5 cut(s)	452, 515, 728, 1184, 1350
MaeII	ACGT	3 cut(s)	328, 816, 1312
MaeIII	GTNAC	4 cut(s)	49, 467, 785, 1056
MalI	GATC	4 cut(s)	475, 495, 666, 1129
MbiI	CCGCTC	1 cut(s)	945
MboI	GATC	4 cut(s)	473, 493, 664, 1127
MfeI	CAATTG	2 cut(s)	977, 1001
MhlI	GDGCHC	6 cut(s)	116, 631, 738, 957, 1285, 1324
MlsI	TGGCCA	2 cut(s)	1166, 1172
MluCI	AATT	7 cut(s)	132, 260, 310, 596, 772, 977, 1001
MluNI	TGGCCA	2 cut(s)	1166, 1172
MlyI	GAGTC	2 cut(s)	362, 982
MnlI	CCTC	7 cut(s)	84, 100, 172, 753, 1063, 1214, 1334
Mox20I	TGGCCA	2 cut(s)	1166, 1172
Mph1103I	ATGCAT	1 cut(s)	1251
MscI	TGGCCA	2 cut(s)	1166, 1172
MseI	TTAA	6 cut(s)	227, 272, 599, 771, 960, 989
MslI	CAYNNNNRTG	3 cut(s)	783, 831, 1172
Msp20I	TGGCCA	2 cut(s)	1166, 1172
MspA1I	CMGCKG	1 cut(s)	911
MspCI	CTTAAG	1 cut(s)	959
MspR9I	CCNGG	5 cut(s)	236, 379, 538, 1211, 1345
MunI	CAATTG	2 cut(s)	977, 1001
Mva1269I	GAATGC	1 cut(s)	673
MvaI	CCWGG	5 cut(s)	236, 379, 538, 1211, 1345
NcoI	CCATGG	2 cut(s)	1167, 1173
NdeI	CATATG	1 cut(s)	565
NdeII	GATC	4 cut(s)	473, 493, 664, 1127
NlaIII	CATG	4 cut(s)	782, 928, 1171, 1177
NlaIV	GGNNCC	2 cut(s)	984, 1202
NmeAIII	GCCGAG	1 cut(s)	87
NmuCI	GTSAC	4 cut(s)	49, 467, 785, 1056
NsbI	TGCGCA	1 cut(s)	825
NsiI	ATGCAT	1 cut(s)	1251
NspI	RCATGY	1 cut(s)	782
PaeR7I	CTCGAG	1 cut(s)	608
PaqCI	CACCTGC	1 cut(s)	1123
PceI	AGGCCT	1 cut(s)	1348
PciSI	GCTCTTC	2 cut(s)	453, 726
PctI	GAATGC	1 cut(s)	673
PfeI	GAWTC	2 cut(s)	433, 461
PflFI	GACNNNGTC	1 cut(s)	815
PflMI	CCANNNNNTGG	1 cut(s)	241
PkrI	GCNGC	7 cut(s)	535, 766, 862, 938, 999, 1026, 1080
PleI	GAGTC	2 cut(s)	361, 981
PpsI	GAGTC	2 cut(s)	361, 981
Ppu21I	YACGTR	1 cut(s)	329
PsiI	TTATAA	1 cut(s)	1017
Psp124BI	GAGCTC	2 cut(s)	116, 957
Psp6I	CCWGG	5 cut(s)	234, 377, 536, 1209, 1343
PspFI	CCCAGC	1 cut(s)	1035
PspGI	CCWGG	5 cut(s)	234, 377, 536, 1209, 1343
PspN4I	GGNNCC	2 cut(s)	984, 1202
PspXI	VCTCGAGB	1 cut(s)	608
PstI	CTGCAG	2 cut(s)	862, 1026
PsyI	GACNNNGTC	1 cut(s)	815
PvuII	CAGCTG	1 cut(s)	911
RsaI	GTAC	3 cut(s)	81, 570, 802
RsaNI	GTAC	3 cut(s)	80, 569, 801
RseI	CAYNNNNRTG	3 cut(s)	783, 831, 1172
SacI	GAGCTC	2 cut(s)	116, 957
SapI	GCTCTTC	2 cut(s)	453, 726
SaqAI	TTAA	6 cut(s)	227, 272, 599, 771, 960, 989
SatI	GCNGC	7 cut(s)	534, 765, 861, 937, 998, 1025, 1079
Sau3AI	GATC	4 cut(s)	473, 493, 664, 1127
SchI	GAGTC	2 cut(s)	362, 982
ScrFI	CCNGG	5 cut(s)	236, 379, 538, 1211, 1345
SduI	GDGCHC	6 cut(s)	116, 631, 738, 957, 1285, 1324
SfaNI	GCATC	3 cut(s)	172, 1039, 1258
SfcI	CTRYAG	2 cut(s)	858, 1022
Sfr274I	CTCGAG	1 cut(s)	608
SlaI	CTCGAG	1 cut(s)	608
SmiMI	CAYNNNNRTG	3 cut(s)	783, 831, 1172
SmlI	CTYRAG	4 cut(s)	152, 578, 608, 959
SmoI	CTYRAG	4 cut(s)	152, 578, 608, 959
Sse9I	AATT	7 cut(s)	132, 260, 310, 596, 772, 977, 1001
SseBI	AGGCCT	1 cut(s)	1348
SsiI	CCGC	4 cut(s)	782, 936, 943, 1207
SspI	AATATT	1 cut(s)	645
SspMI	CTAG	5 cut(s)	452, 515, 728, 1184, 1350
SstI	GAGCTC	2 cut(s)	116, 957
StuI	AGGCCT	1 cut(s)	1348
StyD4I	CCNGG	5 cut(s)	234, 377, 536, 1209, 1343
StyI	CCWWGG	4 cut(s)	1098, 1167, 1173, 1349
TaaI	ACNGT	1 cut(s)	805
TaiI	ACGT	3 cut(s)	331, 819, 1315
TaqI	TCGA	2 cut(s)	609, 1318
TaqII	GACCGA	1 cut(s)	68
TasI	AATT	7 cut(s)	132, 260, 310, 596, 772, 977, 1001
TatI	WGTACW	1 cut(s)	568
TauI	GCSGC	1 cut(s)	939
TfiI	GAWTC	2 cut(s)	433, 461
Tru1I	TTAA	6 cut(s)	227, 272, 599, 771, 960, 989
Tru9I	TTAA	6 cut(s)	227, 272, 599, 771, 960, 989
TscAI	CASTG	5 cut(s)	103, 246, 294, 472, 796
TseFI	GTSAC	4 cut(s)	49, 467, 785, 1056
TseI	GCWGC	6 cut(s)	533, 764, 860, 997, 1024, 1078
Tsp45I	GTSAC	4 cut(s)	49, 467, 785, 1056
TspDTI	ATGAA	3 cut(s)	114, 637, 913
TspGWI	ACGGA	2 cut(s)	568, 1007
TspRI	CASTG	5 cut(s)	103, 246, 294, 472, 796
Tth111I	GACNNNGTC	1 cut(s)	815
Van91I	CCANNNNNTGG	1 cut(s)	241
Vha464I	CTTAAG	1 cut(s)	959
VneI	GTGCAC	1 cut(s)	1281
XagI	CCTNNNNNAGG	1 cut(s)	1208
XapI	RAATTY	2 cut(s)	132, 310
XceI	RCATGY	1 cut(s)	782
XhoI	CTCGAG	1 cut(s)	608
XmaJI	CCTAGG	1 cut(s)	1349
XmiI	GTMKAC	1 cut(s)	1255
XspI	CTAG	5 cut(s)	452, 515, 728, 1184, 1350
Zsp2I	ATGCAT	1 cut(s)	1251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.