Prupe.2G041300_v2.0.a1
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
4536782 .. 4550063
13282 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G041300.1

Sequence Viewer

Length: 1002 bp
ATGGCTGATGGCAGTCCCAGGACTGATATTTCTACAGATGTGGATACAGATGATAAGAATCAAAGGTTTGACGTAGTGCAATACGCCATTGGTCCTGCGGGTTCTGATTCCAGTGACAAATCAAAAGATCCAAAAGATCAGAAGACTCTTCGTAGGCTTGCTCAAAATCGTGAGGCTGCAAGAAAAAGTCGACTGAGGAAGAAAGCTTATGTTCAGCAGCTGGAGAGTAGTCGTTTGAAGCTCACTCAACTAGAGCAAGAGCTCCAGCGAGCCAGACAACAGGGAATCTTCATATCAAGTTCAGGAGATGCTGCTCATTCTATGAGTGGAAATGGGGCCATGGCATTTGATGTAGAATATGGACGGTGGCAGGAAGAGCAAAATCGGCAAATTAATGAACTGAGATCAGCAGTAAATTCTCATGCAAGTGATGCAGAGCTTCGCACTATTGTAGATGGAATCTTGGCGCATTATGATGAGATATTTAGGCTGAAGGGCACAGCAGCTAAAGCTGATGTATTCCATTTGTTGTCTGGCATGTGGAAAACACCTGCTGAGAGGTGTTTCTTGTGGCTTGGTGGTTTTCGTTCATCTGAGCTCCTGAAGCTTCTTGTTAATCAGCTGGAGCCTCTAACAGAGCAGCAGTTGGTGGGGATAACCAACTTGCAGCAATCCTCCCAACAGGCAGAAGATGCCTTATCTCAAGGGATGGATGCATTACAACAATCTCTAGCGGAGACTTTGTCCAGTGGATCTCTTGGCTCCTCAAGTTCCTCTGGGAATGTGGCAAACTACATGGGTCAAATGGCCATGGCAATGGGAAAGCTAGGGACCCTTGAAGGGTTTATCCGCCAGGCTGACAATTTGCGGCAACAAACACTGCAACAAATGCATCGTATATTGACCACCCGCCAGTCAGCTCGTGCCCTTTTGGCTATAAATGATTATTTCTCGCGGCTACGGGCTCTTAGTTCGCTCTGGCTTGCCCGTCCAAGAGAGTGA

Protein Analysis

334

Amino Acids

37.07

Weight (kDa)

8.59

Isoelectric Point (pI)

58.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 559
Acc36I ACCTGC 1 cut(s) 559
AccI GTMKAC 1 cut(s) 190
AccII CGCG 1 cut(s) 955
AciI CCGC 6 cut(s) 98, 734, 850, 868, 910, 955
AclWI GGATC 2 cut(s) 122, 760
AcoI YGGCCR 1 cut(s) 807
AcsI RAATTY 1 cut(s) 415
AcuI CTGAAG 2 cut(s) 512, 623
AfiI CCNNNNNNNGG 1 cut(s) 840
AgsI TTSAA 2 cut(s) 238, 839
AjnI CCWGG 2 cut(s) 17, 852
Alw21I GWGCWC 2 cut(s) 264, 600
Alw26I GTCTC 1 cut(s) 731
AlwI GGATC 2 cut(s) 122, 760
AlwNI CAGNNNCTG 1 cut(s) 220
AoxI GGCC 2 cut(s) 336, 807
ApeKI GCWGC 6 cut(s) 176, 217, 311, 503, 640, 667
ApoI RAATTY 1 cut(s) 415
AseI ATTAAT 1 cut(s) 393
AspLEI GCGC 1 cut(s) 469
AspS9I GGNCC 3 cut(s) 92, 336, 831
AvaII GGWCC 2 cut(s) 92, 831
BaeGI GKGCMC 2 cut(s) 500, 928
BalI TGGCCA 1 cut(s) 809
BanII GRGCYC 3 cut(s) 264, 600, 967
BauI CACGAG 1 cut(s) 921
BbsI GAAGAC 1 cut(s) 149
Bbv12I GWGCWC 2 cut(s) 264, 600
BbvI GCAGC 6 cut(s) 163, 229, 298, 515, 652, 679
BccI CCATC 3 cut(s) 2, 449, 703
BciT130I CCWGG 2 cut(s) 19, 854
BciVI GTATCC 1 cut(s) 37
BcoDI GTCTC 1 cut(s) 731
BfaI CTAG 3 cut(s) 251, 731, 827
BfmI CTRYAG 1 cut(s) 33
BfuAI ACCTGC 1 cut(s) 559
BfuI GTATCC 1 cut(s) 37
BglI GCCNNNNNGGC 1 cut(s) 932
BisI GCNGC 8 cut(s) 177, 218, 312, 504, 641, 668, 869, 956
BlsI GCNGC 8 cut(s) 178, 219, 313, 505, 642, 669, 870, 957
Bme1390I CCNGG 2 cut(s) 19, 854
Bme18I GGWCC 2 cut(s) 92, 831
BmgT120I GGNCC 3 cut(s) 92, 336, 831
BmiI GGNNCC 5 cut(s) 337, 627, 763, 832, 833
BmrFI CCNGG 2 cut(s) 19, 854
BmsI GCATC 5 cut(s) 298, 421, 682, 703, 901
BpiI GAAGAC 1 cut(s) 149
BpmI CTGGAG 3 cut(s) 242, 248, 644
BpuEI CTTGAG 2 cut(s) 687, 751
BsaBI GATNNNNATC 1 cut(s) 57
BsaJI CCNNGG 3 cut(s) 17, 339, 810
BsaXI ACNNNNNCTCC 2 cut(s) 728, 758
Bsc4I CCNNNNNNNGG 1 cut(s) 840
Bse1I ACTGG 3 cut(s) 111, 747, 913
Bse3DI GCAATG 1 cut(s) 822
Bse8I GATNNNNATC 1 cut(s) 57
BseBI CCWGG 2 cut(s) 19, 854
BseDI CCNNGG 3 cut(s) 17, 339, 810
BseGI GGATG 2 cut(s) 714, 718
BseJI GATNNNNATC 1 cut(s) 57
BseLI CCNNNNNNNGG 1 cut(s) 840
BseMI GCAATG 1 cut(s) 822
BseMII CTCAG 4 cut(s) 185, 392, 546, 585
BseNI ACTGG 3 cut(s) 111, 747, 913
BseRI GAGGAG 1 cut(s) 754
BseSI GKGCMC 2 cut(s) 500, 928
BseXI GCAGC 6 cut(s) 163, 229, 298, 515, 652, 679
Bsh1236I CGCG 1 cut(s) 955
BshFI GGCC 2 cut(s) 338, 809
BsiHKAI GWGCWC 2 cut(s) 264, 600
BslFI GGGAC 1 cut(s) 844
BslI CCNNNNNNNGG 1 cut(s) 840
BsmAI GTCTC 1 cut(s) 731
BsmFI GGGAC 1 cut(s) 844
BsnI GGCC 2 cut(s) 338, 809
Bsp1286I GDGCHC 5 cut(s) 264, 500, 600, 928, 967
Bsp143I GATC 4 cut(s) 127, 136, 404, 752
Bsp19I CCATGG 2 cut(s) 339, 810
BspACI CCGC 6 cut(s) 98, 734, 850, 868, 910, 955
BspANI GGCC 2 cut(s) 338, 809
BspCNI CTCAG 4 cut(s) 186, 393, 547, 586
BspFNI CGCG 1 cut(s) 955
BspLI GGNNCC 5 cut(s) 337, 627, 763, 832, 833
BspMI ACCTGC 1 cut(s) 559
BspPI GGATC 2 cut(s) 122, 760
BspQI GCTCTTC 1 cut(s) 369
BsrDI GCAATG 1 cut(s) 822
BsrI ACTGG 3 cut(s) 111, 747, 913
BssECI CCNNGG 3 cut(s) 17, 339, 810
BssMI GATC 4 cut(s) 127, 136, 404, 752
BssSI CACGAG 1 cut(s) 921
BssT1I CCWWGG 2 cut(s) 339, 810
Bst2BI CACGAG 1 cut(s) 921
Bst2UI CCWGG 2 cut(s) 19, 854
Bst4CI ACNGT 1 cut(s) 366
Bst6I CTCTTC 2 cut(s) 153, 369
BstAPI GCANNNNNTGC 3 cut(s) 431, 692, 889
BstC8I GCNNGC 3 cut(s) 159, 270, 984
BstDEI CTNAG 5 cut(s) 194, 401, 555, 594, 968
BstDSI CCRYGG 2 cut(s) 339, 810
BstF5I GGATG 2 cut(s) 714, 718
BstFNI CGCG 1 cut(s) 955
BstHHI GCGC 1 cut(s) 469
BstKTI GATC 4 cut(s) 130, 139, 407, 755
BstMAI GTCTC 1 cut(s) 731
BstMBI GATC 4 cut(s) 127, 136, 404, 752
BstMWI GCNNNNNNNGC 8 cut(s) 376, 385, 431, 509, 604, 692, 889, 932
BstNI CCWGG 2 cut(s) 19, 854
BstNSI RCATGY 1 cut(s) 541
BstSCI CCNGG 2 cut(s) 17, 852
BstSFI CTRYAG 1 cut(s) 33
BstSLI GKGCMC 2 cut(s) 500, 928
BstUI CGCG 1 cut(s) 955
BstV1I GCAGC 6 cut(s) 163, 229, 298, 515, 652, 679
BstV2I GAAGAC 1 cut(s) 149
BstX2I RGATCY 2 cut(s) 127, 752
BstXI CCANNNNNNTGG 1 cut(s) 817
BstYI RGATCY 2 cut(s) 127, 752
BsuI GTATCC 1 cut(s) 37
BsuRI GGCC 2 cut(s) 338, 809
BtgI CCRYGG 2 cut(s) 339, 810
BtsCI GGATG 2 cut(s) 714, 718
BtsI GCAGTG 1 cut(s) 878
BtsIMutI CAGTG 3 cut(s) 118, 754, 878
BveI ACCTGC 1 cut(s) 559
Cac8I GCNNGC 3 cut(s) 159, 270, 984
CaiI CAGNNNCTG 1 cut(s) 220
CfoI GCGC 1 cut(s) 469
Cfr13I GGNCC 3 cut(s) 92, 336, 831
CviAII CATG 5 cut(s) 340, 422, 538, 796, 811
DdeI CTNAG 5 cut(s) 194, 401, 555, 594, 968
DpnI GATC 4 cut(s) 129, 138, 406, 754
DpnII GATC 4 cut(s) 127, 136, 404, 752
EaeI YGGCCR 1 cut(s) 807
Eam1104I CTCTTC 2 cut(s) 153, 369
EarI CTCTTC 2 cut(s) 153, 369
EciI GGCGGA 1 cut(s) 839
Ecl136II GAGCTC 2 cut(s) 262, 598
Eco130I CCWWGG 2 cut(s) 339, 810
Eco24I GRGCYC 3 cut(s) 264, 600, 967
Eco47I GGWCC 2 cut(s) 92, 831
Eco53kI GAGCTC 2 cut(s) 262, 598
Eco57I CTGAAG 2 cut(s) 512, 623
EcoICRI GAGCTC 2 cut(s) 262, 598
EcoO109I RGGNCCY 1 cut(s) 831
EcoRII CCWGG 2 cut(s) 17, 852
EcoT14I CCWWGG 2 cut(s) 339, 810
EcoT22I ATGCAT 2 cut(s) 718, 894
EcoT38I GRGCYC 3 cut(s) 264, 600, 967
ErhI CCWWGG 2 cut(s) 339, 810
FaeI CATG 5 cut(s) 343, 425, 541, 799, 814
FaqI GGGAC 1 cut(s) 844
FatI CATG 5 cut(s) 339, 421, 537, 795, 810
FauI CCCGC 2 cut(s) 91, 917
FblI GTMKAC 1 cut(s) 190
Fnu4HI GCNGC 8 cut(s) 177, 218, 312, 504, 641, 668, 869, 956
FokI GGATG 2 cut(s) 721, 725
FriOI GRGCYC 3 cut(s) 264, 600, 967
Fsp4HI GCNGC 8 cut(s) 177, 218, 312, 504, 641, 668, 869, 956
FspBI CTAG 3 cut(s) 251, 731, 827
GlaI GCGC 1 cut(s) 468
GluI GCNGC 8 cut(s) 177, 218, 312, 504, 641, 668, 869, 956
GsuI CTGGAG 3 cut(s) 242, 248, 644
HaeIII GGCC 2 cut(s) 338, 809
HhaI GCGC 1 cut(s) 469
Hin1II CATG 5 cut(s) 343, 425, 541, 799, 814
Hin6I GCGC 1 cut(s) 467
HinP1I GCGC 1 cut(s) 467
HincII GTYRAC 1 cut(s) 191
HindII GTYRAC 1 cut(s) 191
HindIII AAGCTT 2 cut(s) 204, 605
HinfI GANTC 5 cut(s) 58, 107, 145, 285, 459
Hpy166II GTNNAC 1 cut(s) 191
Hpy188I TCNGA 3 cut(s) 106, 141, 595
Hpy188III TCNNGA 3 cut(s) 170, 303, 601
Hpy8I GTNNAC 1 cut(s) 191
HpyAV CCTTC 2 cut(s) 487, 833
HpyCH4III ACNGT 1 cut(s) 366
HpyCH4IV ACGT 1 cut(s) 72
HpyCH4V TGCA 8 cut(s) 79, 179, 425, 434, 667, 716, 883, 892
HpyF10VI GCNNNNNNNGC 8 cut(s) 376, 385, 431, 509, 604, 692, 889, 932
HpyF3I CTNAG 5 cut(s) 194, 401, 555, 594, 968
HpySE526I ACGT 1 cut(s) 72
Hsp92II CATG 5 cut(s) 343, 425, 541, 799, 814
HspAI GCGC 1 cut(s) 467
KflI GGGWCCC 1 cut(s) 831
Kzo9I GATC 4 cut(s) 127, 136, 404, 752
LguI GCTCTTC 1 cut(s) 369
LmnI GCTCC 4 cut(s) 267, 603, 625, 767
Lsp1109I GCAGC 6 cut(s) 163, 229, 298, 515, 652, 679
LweI GCATC 5 cut(s) 298, 421, 682, 703, 901
MaeI CTAG 3 cut(s) 251, 731, 827
MaeII ACGT 1 cut(s) 72
MaeIII GTNAC 1 cut(s) 113
MalI GATC 4 cut(s) 129, 138, 406, 754
MboI GATC 4 cut(s) 127, 136, 404, 752
MboII GAAGA 6 cut(s) 140, 154, 211, 280, 386, 701
MflI RGATCY 2 cut(s) 127, 752
MhlI GDGCHC 5 cut(s) 264, 500, 600, 928, 967
MlsI TGGCCA 1 cut(s) 809
MluCI AATT 3 cut(s) 390, 415, 862
MluNI TGGCCA 1 cut(s) 809
MlyI GAGTC 1 cut(s) 139
MnlI CCTC 7 cut(s) 166, 189, 552, 639, 685, 775, 784
Mox20I TGGCCA 1 cut(s) 809
Mph1103I ATGCAT 2 cut(s) 718, 894
MscI TGGCCA 1 cut(s) 809
MseI TTAA 2 cut(s) 393, 615
MslI CAYNNNNRTG 3 cut(s) 426, 474, 815
Msp20I TGGCCA 1 cut(s) 809
MspA1I CMGCKG 2 cut(s) 220, 622
MspR9I CCNGG 2 cut(s) 19, 854
MvaI CCWGG 2 cut(s) 19, 854
MvnI CGCG 1 cut(s) 955
MwoI GCNNNNNNNGC 8 cut(s) 376, 385, 431, 509, 604, 692, 889, 932
NcoI CCATGG 2 cut(s) 339, 810
NdeII GATC 4 cut(s) 127, 136, 404, 752
NlaIII CATG 5 cut(s) 343, 425, 541, 799, 814
NlaIV GGNNCC 5 cut(s) 337, 627, 763, 832, 833
NmuCI GTSAC 1 cut(s) 113
NsiI ATGCAT 2 cut(s) 718, 894
NspI RCATGY 1 cut(s) 541
PaqCI CACCTGC 1 cut(s) 559
PciSI GCTCTTC 1 cut(s) 369
PfeI GAWTC 4 cut(s) 58, 107, 285, 459
PflFI GACNNNGTC 1 cut(s) 742
PkrI GCNGC 8 cut(s) 178, 219, 313, 505, 642, 669, 870, 957
PleI GAGTC 1 cut(s) 139
PpsI GAGTC 1 cut(s) 139
PpuMI RGGWCCY 1 cut(s) 831
PshBI ATTAAT 1 cut(s) 393
Psp124BI GAGCTC 2 cut(s) 264, 600
Psp5II RGGWCCY 1 cut(s) 831
Psp6I CCWGG 2 cut(s) 17, 852
PspGI CCWGG 2 cut(s) 17, 852
PspN4I GGNNCC 5 cut(s) 337, 627, 763, 832, 833
PspPI GGNCC 3 cut(s) 92, 336, 831
PspPPI RGGWCCY 1 cut(s) 831
PstNI CAGNNNCTG 1 cut(s) 220
PsuI RGATCY 2 cut(s) 127, 752
PsyI GACNNNGTC 1 cut(s) 742
PvuII CAGCTG 2 cut(s) 220, 622
RseI CAYNNNNRTG 3 cut(s) 426, 474, 815
SacI GAGCTC 2 cut(s) 264, 600
SalI GTCGAC 1 cut(s) 189
SapI GCTCTTC 1 cut(s) 369
SaqAI TTAA 2 cut(s) 393, 615
SatI GCNGC 8 cut(s) 177, 218, 312, 504, 641, 668, 869, 956
Sau3AI GATC 4 cut(s) 127, 136, 404, 752
Sau96I GGNCC 3 cut(s) 92, 336, 831
SchI GAGTC 1 cut(s) 139
ScrFI CCNGG 2 cut(s) 19, 854
SduI GDGCHC 5 cut(s) 264, 500, 600, 928, 967
SfaNI GCATC 5 cut(s) 298, 421, 682, 703, 901
SfcI CTRYAG 1 cut(s) 33
SinI GGWCC 2 cut(s) 92, 831
SmiMI CAYNNNNRTG 3 cut(s) 426, 474, 815
SmlI CTYRAG 2 cut(s) 702, 766
SmoI CTYRAG 2 cut(s) 702, 766
Sse9I AATT 3 cut(s) 390, 415, 862
SsiI CCGC 6 cut(s) 98, 734, 850, 868, 910, 955
SspMI CTAG 3 cut(s) 251, 731, 827
SstI GAGCTC 2 cut(s) 264, 600
StyD4I CCNGG 2 cut(s) 17, 852
StyI CCWWGG 2 cut(s) 339, 810
TaaI ACNGT 1 cut(s) 366
TaiI ACGT 1 cut(s) 75
TaqI TCGA 1 cut(s) 190
TasI AATT 3 cut(s) 390, 415, 862
TauI GCSGC 2 cut(s) 871, 958
TfiI GAWTC 4 cut(s) 58, 107, 285, 459
Tru1I TTAA 2 cut(s) 393, 615
Tru9I TTAA 2 cut(s) 393, 615
TscAI CASTG 3 cut(s) 118, 754, 885
TseFI GTSAC 1 cut(s) 113
TseI GCWGC 6 cut(s) 176, 217, 311, 503, 640, 667
Tsp45I GTSAC 1 cut(s) 113
TspDTI ATGAA 3 cut(s) 280, 411, 579
TspRI CASTG 3 cut(s) 118, 754, 885
Tth111I GACNNNGTC 1 cut(s) 742
VpaK11BI GGWCC 2 cut(s) 92, 831
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 1 cut(s) 415
XceI RCATGY 1 cut(s) 541
XcmI CCANNNNNNNNNTGG 1 cut(s) 530
XmiI GTMKAC 1 cut(s) 190
XspI CTAG 3 cut(s) 251, 731, 827
Zsp2I ATGCAT 2 cut(s) 718, 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.