Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001056

Physical Location & Seq

Genomic Coordinates Forward (+)

48439229 .. 48446837

Gene Structure 7609 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00117830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGGGCAGTAGAACAGTCAAAATCGGTTCAAATGATGCAAATAAACTGGTGACCGACATGCCGAGCTTTGTTACTCCAGTACCCACTTCCAATCCCATTGGCACAGAGGGGAGCTCCTCCATTCGTTCTTCTCGAATCTCAGACTTTGAGAGTCTTGAGCAGACTCTTGGATTTAACATAGAGGATGCTGTTGACATTGGAAGAAGTCCTGTGTATAATCAAAATAATTCAATTAGCCGGGCACCGGGAGGCAAGGATGTCCAATTTAGCACTTTAAATAAGCTGTTGCCACAAAAAGAGCTTCAACCAAATCTGGTTTCAGTATCTCGTAGCAATCACGAGAACTGGGGGGAATCCAATATGGCAGATGGAAGTCCTAGGACTGATACTTCAACAGATGACACAGAGGATAAAAATCAGATGATTGAAAGGAATCAAATGACTGGTCTTCTAGCTTCTGATTCCAGTGATAGATCAAAAGAAAAACCTGGGGATCAAAAGACGCTGCGCAGGCTTGCTCAAAATCGTGAAGCTGCCAGGAAAAGCCGGTTACGAAAAAAAGCATATGTACAACAACTTGAGAGTAGCCGGTTGAAATTAACGCAGCTTGAGCAAGAACTTCAGCGTGCCCGCCAGCAGGGCATATTCATTTCAAGCTCTGGAGATCAAGCCCATTCAATGAGTGGAAATGGTGCTTTGGCATTCGATGTGGAATATGCAAGGTGGCTGGAGGAGCACAACAGGCAGATAAATGAGTTGAGGGCTGCTGTTAATTCACATGCGGGTGACACGGAGCTCCGTACTGTAATTGATAATGTCATTGCTCACTATGATGACATTTTTAGACTAAAGGGCATTGCAGCAAAAGCTGATGTTTTCCACATTTTGTCAGGAATGTGGAAAACACCAGCGGAACGGTGTTTTATGTGGATTGGTGGCTTCCGCTCATCTGAGCTTTTGAAGCTTCTTGTGCGTCAATTGGAACCCCTAACGGAGCAGCAAGTGATGAATATTTACAACTTACAGCAATCATCCCAGCAGGCTGAAGATGCTTTGTCACAAGGGATGGAAGCATTACAGCAGTCACTTGCTGAGACCTTGGCCAGTGGTTCACCTGGGCCATCAGGAACATCTGGGAATGTAGCAAACTATATGGGTCAAATGGCTATGGCGATGGGAAAGCTAGGCACTCTTGAGGGGTTCCTTCGCCAGGCTGATAATCTTCGCCAGCAAACTCTGCAACAAATGCATCGTATACTGACAACTCGGCAGTCAGCTCGTGCACTTCTTGCAATCAATGATTATTTCTCGCGTCTTAGAGCCCTCAGTTCTCTTTGGCTTGCCAGGCCCCGAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DOG1 bZIP_1 bZIP_2

Protein Analysis

452

Amino Acids

50.28

Weight (kDa)

7.84

Isoelectric Point (pI)

62.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_1	PF00170	167 - 207	1.2e-06	bZIP transcription factor
DOG1	PF14144	249 - 324	3.8e-32	Seed dormancy control

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT5G06950 AT5G06950 AT5G06950 AT5G06950 AT5G06950 AT5G06960 AT5G06960 AT5G06960
fragaria_vesca	FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_7g03530
malus_domestica	MD02G1279400.v1.1 MD07G1047300.v1.1 MD12G1096400.v1.1 MD14G1089200.v1.1
prunus_persica	Prupe.2G041300_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1
pyrus_communis	pycom02g23960 pycom07g03420 pycom12g08570 pycom14g07870
rosa_chinensis	RchiOBHm_Chr1g0325831 RchiOBHm_Chr2g0125681
rosa_laevigata	RLG00000018877 RLG00000030099
rosa_multiflora	Rmu_sc0013657.1_g000002 Rmu_ssc0000055.1_g000021
rosa_roxburghii	Rroxscaffold_2G00117830 Rroxscaffold_4G00324240
rosa_rugosa	Rorug01G0055400 Rorug02G0258500 Rorug02G0258600.1 Rorug02G0258700 Rorug02G0258700 Rorug02G0258700
rosa_samantha	Rh1AG071800 Rh1BG058700 Rh1CG071100 Rh1DG075900 Rh2AG317000 Rh2BG324900 Rh2CG306800
rosa_wichuraiana	Rw1G005840 Rw2G025630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	509
AccB1I	GGYRCC	1 cut(s)	241
AccBSI	CCGCTC	1 cut(s)	945
AccI	GTMKAC	1 cut(s)	1255
AccII	CGCG	1 cut(s)	1312
AciI	CCGC	4 cut(s)	631, 782, 911, 943
AclWI	GGATC	1 cut(s)	501
AcoI	YGGCCR	1 cut(s)	1101
AcuI	CTGAAG	2 cut(s)	605, 1065
AfaI	GTAC	3 cut(s)	81, 570, 802
AfiI	CCNNNNNNNGG	3 cut(s)	244, 637, 1210
AgsI	TTSAA	9 cut(s)	30, 231, 305, 393, 428, 595, 654, 678, 961
AjnI	CCWGG	5 cut(s)	487, 536, 1114, 1209, 1343
AjuI	GAANNNNNNNTTGG	2 cut(s)	301, 333
Alw21I	GWGCWC	4 cut(s)	116, 738, 798, 1285
Alw26I	GTCTC	1 cut(s)	1088
Alw44I	GTGCAC	1 cut(s)	1281
AlwI	GGATC	1 cut(s)	501
Ama87I	CYCGRG	1 cut(s)	1350
AoxI	GGCC	3 cut(s)	1101, 1118, 1346
ApaLI	GTGCAC	1 cut(s)	1281
ApeKI	GCWGC	6 cut(s)	505, 533, 604, 764, 860, 997
ArsI	GACNNNNNNTTYG	2 cut(s)	430, 462
AspA2I	CCTAGG	1 cut(s)	377
AspLEI	GCGC	1 cut(s)	510
AspS9I	GGNCC	2 cut(s)	1118, 1347
AsuC2I	CCSGG	2 cut(s)	239, 246
AsuHPI	GGTGA	3 cut(s)	61, 797, 1104
AvaI	CYCGRG	1 cut(s)	1350
AvrII	CCTAGG	1 cut(s)	377
BaeGI	GKGCMC	3 cut(s)	244, 631, 1285
BaeI	ACNNNNGTAYC	2 cut(s)	63, 96
BalI	TGGCCA	1 cut(s)	1103
BanI	GGYRCC	1 cut(s)	241
BanII	GRGCYC	3 cut(s)	116, 798, 1324
BauI	CACGAG	2 cut(s)	338, 1278
BbsI	GAAGAC	1 cut(s)	440
Bbv12I	GWGCWC	4 cut(s)	116, 738, 798, 1285
BbvI	GCAGC	6 cut(s)	492, 520, 616, 751, 872, 1009
BccI	CCATC	4 cut(s)	362, 1060, 1129, 1168
BcgI	CGANNNNNNTGC	2 cut(s)	1259, 1293
BciT130I	CCWGG	5 cut(s)	489, 538, 1116, 1211, 1345
BcnI	CCSGG	2 cut(s)	239, 246
BcoDI	GTCTC	1 cut(s)	1088
BfaI	CTAG	3 cut(s)	378, 452, 1184
BglI	GCCNNNNNGGC	1 cut(s)	639
BisI	GCNGC	6 cut(s)	506, 534, 605, 765, 861, 998
BlnI	CCTAGG	1 cut(s)	377
BlsI	GCNGC	6 cut(s)	507, 535, 606, 766, 862, 999
Bme1390I	CCNGG	7 cut(s)	239, 246, 489, 538, 1116, 1211, 1345
BmeT110I	CYCGRG	1 cut(s)	1350
BmgT120I	GGNCC	2 cut(s)	1118, 1347
BmiI	GGNNCC	4 cut(s)	243, 984, 1202, 1349
BmrFI	CCNGG	7 cut(s)	239, 246, 489, 538, 1116, 1211, 1345
BmrI	ACTGGG	1 cut(s)	355
BmsI	GCATC	4 cut(s)	25, 175, 1039, 1258
BmuI	ACTGGG	1 cut(s)	355
BpiI	GAAGAC	1 cut(s)	440
BplI	GAGNNNNNCTC	2 cut(s)	98, 130
BpmI	CTGGAG	3 cut(s)	60, 681, 749
BpuEI	CTTGAG	4 cut(s)	176, 599, 629, 1214
BpuMI	CCSGG	2 cut(s)	239, 246
BsaBI	GATNNNNATC	1 cut(s)	414
BsaI	GGTCTC	1 cut(s)	1088
BsaJI	CCNNGG	4 cut(s)	377, 488, 1098, 1115
Bsc4I	CCNNNNNNNGG	3 cut(s)	244, 637, 1210
Bse118I	RCCGGY	2 cut(s)	546, 588
Bse1I	ACTGG	6 cut(s)	51, 77, 350, 448, 465, 1104
Bse3DI	GCAATG	2 cut(s)	819, 855
Bse8I	GATNNNNATC	1 cut(s)	414
BseBI	CCWGG	5 cut(s)	489, 538, 1116, 1211, 1345
BseDI	CCNNGG	4 cut(s)	377, 488, 1098, 1115
BseGI	GGATG	4 cut(s)	190, 262, 1031, 1071
BseJI	GATNNNNATC	1 cut(s)	414
BseLI	CCNNNNNNNGG	3 cut(s)	244, 637, 1210
BseMI	GCAATG	2 cut(s)	819, 855
BseMII	CTCAG	4 cut(s)	153, 942, 1083, 1339
BseNI	ACTGG	6 cut(s)	51, 77, 350, 448, 465, 1104
BseRI	GAGGAG	2 cut(s)	106, 746
BseSI	GKGCMC	3 cut(s)	244, 631, 1285
BseXI	GCAGC	6 cut(s)	492, 520, 616, 751, 872, 1009
BseYI	CCCAGC	1 cut(s)	1035
Bsh1236I	CGCG	1 cut(s)	1312
BshFI	GGCC	3 cut(s)	1103, 1120, 1348
BshNI	GGYRCC	1 cut(s)	241
BsiHKAI	GWGCWC	4 cut(s)	116, 738, 798, 1285
BsiHKCI	CYCGRG	1 cut(s)	1350
BsiSI	CCGG	4 cut(s)	238, 245, 547, 589
BslI	CCNNNNNNNGG	3 cut(s)	244, 637, 1210
BsmAI	GTCTC	1 cut(s)	1088
BsmI	GAATGC	1 cut(s)	701
BsnI	GGCC	3 cut(s)	1103, 1120, 1348
Bso31I	GGTCTC	1 cut(s)	1088
BsoBI	CYCGRG	1 cut(s)	1350
Bsp1286I	GDGCHC	7 cut(s)	116, 244, 631, 738, 798, 1285, 1324
Bsp1407I	TGTACA	1 cut(s)	568
Bsp143I	GATC	3 cut(s)	473, 493, 664
BspACI	CCGC	4 cut(s)	631, 782, 911, 943
BspANI	GGCC	3 cut(s)	1103, 1120, 1348
BspCNI	CTCAG	4 cut(s)	152, 943, 1084, 1338
BspFNI	CGCG	1 cut(s)	1312
BspLI	GGNNCC	4 cut(s)	243, 984, 1202, 1349
BspPI	GGATC	1 cut(s)	501
BspT107I	GGYRCC	1 cut(s)	241
BspTNI	GGTCTC	1 cut(s)	1088
BsrBI	CCGCTC	1 cut(s)	945
BsrDI	GCAATG	2 cut(s)	819, 855
BsrFI	RCCGGY	2 cut(s)	546, 588
BsrGI	TGTACA	1 cut(s)	568
BsrI	ACTGG	6 cut(s)	51, 77, 350, 448, 465, 1104
BssAI	RCCGGY	2 cut(s)	546, 588
BssECI	CCNNGG	4 cut(s)	377, 488, 1098, 1115
BssMI	GATC	3 cut(s)	473, 493, 664
BssNAI	GTATAC	1 cut(s)	1256
BssSI	CACGAG	2 cut(s)	338, 1278
BssT1I	CCWWGG	2 cut(s)	377, 1098
Bst1107I	GTATAC	1 cut(s)	1256
Bst2BI	CACGAG	2 cut(s)	338, 1278
Bst2UI	CCWGG	5 cut(s)	489, 538, 1116, 1211, 1345
Bst4CI	ACNGT	3 cut(s)	16, 805, 918
BstAPI	GCANNNNNTGC	3 cut(s)	1237, 1246, 1289
BstAUI	TGTACA	1 cut(s)	568
BstC8I	GCNNGC	8 cut(s)	512, 516, 627, 631, 635, 1041, 1229, 1341
BstDEI	CTNAG	5 cut(s)	139, 951, 1092, 1316, 1325
BstEII	GGTNACC	1 cut(s)	49
BstENI	CCTNNNNNAGG	1 cut(s)	1208
BstF5I	GGATG	4 cut(s)	190, 262, 1031, 1071
BstFNI	CGCG	1 cut(s)	1312
BstHHI	GCGC	1 cut(s)	510
BstKTI	GATC	3 cut(s)	476, 496, 667
BstMAI	GTCTC	1 cut(s)	1088
BstMBI	GATC	3 cut(s)	473, 493, 664
BstNI	CCWGG	5 cut(s)	489, 538, 1116, 1211, 1345
BstNSI	RCATGY	2 cut(s)	61, 782
BstPI	GGTNACC	1 cut(s)	49
BstSCI	CCNGG	7 cut(s)	237, 244, 487, 536, 1114, 1209, 1343
BstSLI	GKGCMC	3 cut(s)	244, 631, 1285
BstUI	CGCG	1 cut(s)	1312
BstV1I	GCAGC	6 cut(s)	492, 520, 616, 751, 872, 1009
BstV2I	GAAGAC	1 cut(s)	440
BstZ17I	GTATAC	1 cut(s)	1256
BsuRI	GGCC	3 cut(s)	1103, 1120, 1348
BtgZI	GCGATG	1 cut(s)	1187
BtsCI	GGATG	4 cut(s)	190, 262, 1031, 1071
BtsIMutI	CAGTG	2 cut(s)	472, 1111
Cac8I	GCNNGC	8 cut(s)	512, 516, 627, 631, 635, 1041, 1229, 1341
CfoI	GCGC	1 cut(s)	510
Cfr10I	RCCGGY	2 cut(s)	546, 588
Cfr13I	GGNCC	2 cut(s)	1118, 1347
CseI	GACGC	3 cut(s)	511, 962, 1301
Csp6I	GTAC	3 cut(s)	80, 569, 801
CviAII	CATG	2 cut(s)	58, 779
CviQI	GTAC	3 cut(s)	80, 569, 801
DdeI	CTNAG	5 cut(s)	139, 951, 1092, 1316, 1325
DpnI	GATC	3 cut(s)	475, 495, 666
DpnII	GATC	3 cut(s)	473, 493, 664
DraI	TTTAAA	1 cut(s)	276
EaeI	YGGCCR	1 cut(s)	1101
Ecl136II	GAGCTC	2 cut(s)	114, 796
Eco130I	CCWWGG	2 cut(s)	377, 1098
Eco24I	GRGCYC	3 cut(s)	116, 798, 1324
Eco31I	GGTCTC	1 cut(s)	1088
Eco53kI	GAGCTC	2 cut(s)	114, 796
Eco57I	CTGAAG	2 cut(s)	605, 1065
Eco88I	CYCGRG	1 cut(s)	1350
Eco91I	GGTNACC	1 cut(s)	49
EcoICRI	GAGCTC	2 cut(s)	114, 796
EcoNI	CCTNNNNNAGG	1 cut(s)	1208
EcoO109I	RGGNCCY	1 cut(s)	1347
EcoO65I	GGTNACC	1 cut(s)	49
EcoRII	CCWGG	5 cut(s)	487, 536, 1114, 1209, 1343
EcoT14I	CCWWGG	2 cut(s)	377, 1098
EcoT22I	ATGCAT	1 cut(s)	1251
EcoT38I	GRGCYC	3 cut(s)	116, 798, 1324
ErhI	CCWWGG	2 cut(s)	377, 1098
FaeI	CATG	2 cut(s)	61, 782
FatI	CATG	2 cut(s)	57, 778
FauI	CCCGC	2 cut(s)	638, 775
FauNDI	CATATG	1 cut(s)	565
FblI	GTMKAC	1 cut(s)	1255
Fnu4HI	GCNGC	6 cut(s)	506, 534, 605, 765, 861, 998
FokI	GGATG	4 cut(s)	197, 269, 1018, 1078
FriOI	GRGCYC	3 cut(s)	116, 798, 1324
Fsp4HI	GCNGC	6 cut(s)	506, 534, 605, 765, 861, 998
FspBI	CTAG	3 cut(s)	378, 452, 1184
FspI	TGCGCA	1 cut(s)	509
GlaI	GCGC	1 cut(s)	509
GluI	GCNGC	6 cut(s)	506, 534, 605, 765, 861, 998
GsaI	CCCAGC	1 cut(s)	1039
GsuI	CTGGAG	3 cut(s)	60, 681, 749
HaeIII	GGCC	3 cut(s)	1103, 1120, 1348
HapII	CCGG	4 cut(s)	238, 245, 547, 589
HgaI	GACGC	3 cut(s)	511, 962, 1301
HhaI	GCGC	1 cut(s)	510
Hin1II	CATG	2 cut(s)	61, 782
Hin6I	GCGC	1 cut(s)	508
HinP1I	GCGC	1 cut(s)	508
HincII	GTYRAC	1 cut(s)	193
HindII	GTYRAC	1 cut(s)	193
HindIII	AAGCTT	1 cut(s)	962
HinfI	GANTC	6 cut(s)	135, 151, 163, 353, 433, 461
HpaII	CCGG	4 cut(s)	238, 245, 547, 589
HphI	GGTGA	3 cut(s)	61, 797, 1104
Hpy166II	GTNNAC	4 cut(s)	193, 1112, 1256, 1283
Hpy188I	TCNGA	4 cut(s)	142, 420, 460, 952
Hpy188III	TCNNGA	8 cut(s)	132, 155, 338, 527, 660, 891, 1125, 1193
Hpy8I	GTNNAC	4 cut(s)	193, 1112, 1256, 1283
HpyAV	CCTTC	1 cut(s)	1214
HpyCH4III	ACNGT	3 cut(s)	16, 805, 918
HpyCH4V	TGCA	7 cut(s)	38, 719, 860, 1240, 1249, 1283, 1292
HpyF3I	CTNAG	5 cut(s)	139, 951, 1092, 1316, 1325
Hsp92II	CATG	2 cut(s)	61, 782
HspAI	GCGC	1 cut(s)	508
Kzo9I	GATC	3 cut(s)	473, 493, 664
LmnI	GCTCC	6 cut(s)	111, 119, 733, 793, 801, 994
Lsp1109I	GCAGC	6 cut(s)	492, 520, 616, 751, 872, 1009
LweI	GCATC	4 cut(s)	25, 175, 1039, 1258
MaeI	CTAG	3 cut(s)	378, 452, 1184
MaeIII	GTNAC	6 cut(s)	49, 70, 549, 785, 1056, 1083
MalI	GATC	3 cut(s)	475, 495, 666
MbiI	CCGCTC	1 cut(s)	945
MboI	GATC	3 cut(s)	473, 493, 664
MboII	GAAGA	5 cut(s)	120, 213, 440, 1058, 1214
MfeI	CAATTG	1 cut(s)	977
MhlI	GDGCHC	7 cut(s)	116, 244, 631, 738, 798, 1285, 1324
MlsI	TGGCCA	1 cut(s)	1103
MluCI	AATT	7 cut(s)	226, 231, 263, 596, 772, 807, 977
MluNI	TGGCCA	1 cut(s)	1103
MlyI	GAGTC	2 cut(s)	157, 160
MnlI	CCTC	9 cut(s)	100, 127, 175, 242, 400, 724, 753, 1189, 1334
Mox20I	TGGCCA	1 cut(s)	1103
Mph1103I	ATGCAT	1 cut(s)	1251
MscI	TGGCCA	1 cut(s)	1103
MseI	TTAA	4 cut(s)	174, 275, 599, 771
MslI	CAYNNNNRTG	2 cut(s)	783, 831
Msp20I	TGGCCA	1 cut(s)	1103
MspA1I	CMGCKG	1 cut(s)	911
MspI	CCGG	4 cut(s)	238, 245, 547, 589
MspR9I	CCNGG	7 cut(s)	239, 246, 489, 538, 1116, 1211, 1345
MunI	CAATTG	1 cut(s)	977
Mva1269I	GAATGC	1 cut(s)	701
MvaI	CCWGG	5 cut(s)	489, 538, 1116, 1211, 1345
MvnI	CGCG	1 cut(s)	1312
NciI	CCSGG	2 cut(s)	239, 246
NdeI	CATATG	1 cut(s)	565
NdeII	GATC	3 cut(s)	473, 493, 664
NlaIII	CATG	2 cut(s)	61, 782
NlaIV	GGNNCC	4 cut(s)	243, 984, 1202, 1349
NmeAIII	GCCGAG	2 cut(s)	87, 1246
NmuCI	GTSAC	4 cut(s)	49, 785, 1056, 1083
NsbI	TGCGCA	1 cut(s)	509
NsiI	ATGCAT	1 cut(s)	1251
NspI	RCATGY	2 cut(s)	61, 782
PcsI	WCGNNNNNNNCGW	1 cut(s)	130
PctI	GAATGC	1 cut(s)	701
PfeI	GAWTC	4 cut(s)	135, 353, 433, 461
PkrI	GCNGC	6 cut(s)	507, 535, 606, 766, 862, 999
PleI	GAGTC	2 cut(s)	157, 159
PpsI	GAGTC	2 cut(s)	157, 159
Psp124BI	GAGCTC	2 cut(s)	116, 798
Psp6I	CCWGG	5 cut(s)	487, 536, 1114, 1209, 1343
PspEI	GGTNACC	1 cut(s)	49
PspFI	CCCAGC	1 cut(s)	1035
PspGI	CCWGG	5 cut(s)	487, 536, 1114, 1209, 1343
PspN4I	GGNNCC	4 cut(s)	243, 984, 1202, 1349
PspPI	GGNCC	2 cut(s)	1118, 1347
RsaI	GTAC	3 cut(s)	81, 570, 802
RsaNI	GTAC	3 cut(s)	80, 569, 801
RseI	CAYNNNNRTG	2 cut(s)	783, 831
SacI	GAGCTC	2 cut(s)	116, 798
SaqAI	TTAA	4 cut(s)	174, 275, 599, 771
SatI	GCNGC	6 cut(s)	506, 534, 605, 765, 861, 998
Sau3AI	GATC	3 cut(s)	473, 493, 664
Sau96I	GGNCC	2 cut(s)	1118, 1347
SchI	GAGTC	2 cut(s)	157, 160
ScrFI	CCNGG	7 cut(s)	239, 246, 489, 538, 1116, 1211, 1345
SduI	GDGCHC	7 cut(s)	116, 244, 631, 738, 798, 1285, 1324
SfaNI	GCATC	4 cut(s)	25, 175, 1039, 1258
SmiMI	CAYNNNNRTG	2 cut(s)	783, 831
SmlI	CTYRAG	4 cut(s)	155, 578, 608, 1193
SmoI	CTYRAG	4 cut(s)	155, 578, 608, 1193
Sse9I	AATT	7 cut(s)	226, 231, 263, 596, 772, 807, 977
SsiI	CCGC	4 cut(s)	631, 782, 911, 943
SspI	AATATT	1 cut(s)	1012
SspMI	CTAG	3 cut(s)	378, 452, 1184
SstI	GAGCTC	2 cut(s)	116, 798
StyD4I	CCNGG	7 cut(s)	237, 244, 487, 536, 1114, 1209, 1343
StyI	CCWWGG	2 cut(s)	377, 1098
TaaI	ACNGT	3 cut(s)	16, 805, 918
TaqI	TCGA	2 cut(s)	133, 705
TaqII	GACCGA	1 cut(s)	68
TasI	AATT	7 cut(s)	226, 231, 263, 596, 772, 807, 977
TatI	WGTACW	1 cut(s)	568
TfiI	GAWTC	4 cut(s)	135, 353, 433, 461
Tru1I	TTAA	4 cut(s)	174, 275, 599, 771
Tru9I	TTAA	4 cut(s)	174, 275, 599, 771
TscAI	CASTG	2 cut(s)	472, 1111
TseFI	GTSAC	4 cut(s)	49, 785, 1056, 1083
TseI	GCWGC	6 cut(s)	505, 533, 604, 764, 860, 997
Tsp45I	GTSAC	4 cut(s)	49, 785, 1056, 1083
TspDTI	ATGAA	2 cut(s)	637, 1022
TspGWI	ACGGA	3 cut(s)	788, 806, 1007
TspRI	CASTG	2 cut(s)	472, 1111
VneI	GTGCAC	1 cut(s)	1281
XagI	CCTNNNNNAGG	1 cut(s)	1208
XceI	RCATGY	2 cut(s)	61, 782
XcmI	CCANNNNNNNNNTGG	1 cut(s)	680
XmaJI	CCTAGG	1 cut(s)	377
XmiI	GTMKAC	1 cut(s)	1255
XspI	CTAG	3 cut(s)	378, 452, 1184
Zsp2I	ATGCAT	1 cut(s)	1251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.