pycom07g03420
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
2805680 .. 2812187
6508 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g03420.2

Sequence Viewer

Length: 1008 bp
ATGGCTGATGGCAGTCCTAGGACTGATATCTCTACAGATGTGGATACAGATGATAAGAATCAAAGGTTTGACAGAGACCAATATGCCATTGCTCCTGTGGCTTCTGATTCCAGTGACAAATCGAAAGATCCAAAAGATCAGAAGACTCTTCGTAGGCTGGCTCAAAATCGTGAGGCTGCGAGAAAAAGTCGGCTGAGGAAGAAAGCATATGTTCAGCAGCTGGAGAGTAGTCGTCTGAAGTTGACTCAACTAGAGCAAGAGCTCCAGCGAGCCAGACAGCAGGGAATCTTCATTTCTAACTCAGGAGATGCTGCCCATTCAAATAGTGGAAATGGGGCCATGACATTCAATGTAGAATATGGACGGTGGCTGGAAGAGCAGAATCGGCAAATTAATGAACTGAGATCAGCAGTAAACTCTCATGCAAGTGATGCAGAGCTTCGTATTATTGTAGATGGAATCTTGGCGCACTATGATGAGATCTTTAAGCTGAAGGGCACAGCAGCTAAAGCCGATGTATTCCATTTGTTGTCTGGTATGTGGAAAACACCTGCTGAGAGGTGTTTCTTGTGGCTTGGAGGTTTTCGTTCATCTGAGCTCTTGAAGCTTCTTGTTACTCAGTTGGAGCCTCTGACGGAGCAGCAGTTGGTTGGGATTAACAACTTGCAGCAGTCCTCCCAACAGGCAGAAGATGCGTTATCCCAAGGGATGGATGCATTGCAACAATCTTTAGCTGAGACCTTGTCCAGTGGATCGATCTTATCCGGCTCCTCAGGTCACTCAGGAAATGTAGCTAACTACATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGGACCCTTGAGGGGTTTATCCGTCAGGCTGACAATTTGCGGCAACAAACACTGCAACAAATGCACCGTATCTTGACAACCCGCCAGTCAGCTCGTGCACTTTTGGCTATACATGATTATTTCTCACGGCTACGTGCTCTGAGTTCTCTCTGGCTTGCCCGCCCAAGAGAGTGA

Protein Analysis

336

Amino Acids

37.45

Weight (kDa)

8.9

Isoelectric Point (pI)

54.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 559
Acc36I ACCTGC 1 cut(s) 559
AccB7I CCANNNNNTGG 1 cut(s) 709
AciI CCGC 3 cut(s) 874, 916, 994
AclWI GGATC 2 cut(s) 122, 760
AcoI YGGCCR 1 cut(s) 813
AcuI CTGAAG 2 cut(s) 257, 512
AfiI CCNNNNNNNGG 2 cut(s) 709, 846
AgsI TTSAA 3 cut(s) 321, 349, 604
Alw21I GWGCWC 4 cut(s) 264, 600, 934, 973
Alw26I GTCTC 2 cut(s) 69, 731
Alw44I GTGCAC 1 cut(s) 930
AlwI GGATC 2 cut(s) 122, 760
AlwNI CAGNNNCTG 1 cut(s) 220
AoxI GGCC 2 cut(s) 336, 813
ApaLI GTGCAC 1 cut(s) 930
ApeKI GCWGC 6 cut(s) 176, 217, 311, 503, 640, 667
AseI ATTAAT 1 cut(s) 393
AspA2I CCTAGG 1 cut(s) 17
AspLEI GCGC 1 cut(s) 469
AspS9I GGNCC 2 cut(s) 336, 837
AvaII GGWCC 1 cut(s) 837
AvrII CCTAGG 1 cut(s) 17
AxyI CCTNAGG 1 cut(s) 772
BaeGI GKGCMC 2 cut(s) 500, 934
BalI TGGCCA 1 cut(s) 815
BanII GRGCYC 2 cut(s) 264, 600
BauI CACGAG 1 cut(s) 927
BbsI GAAGAC 1 cut(s) 149
Bbv12I GWGCWC 4 cut(s) 264, 600, 934, 973
BbvCI CCTCAGC 1 cut(s) 194
BbvI GCAGC 6 cut(s) 163, 229, 298, 515, 652, 679
BccI CCATC 3 cut(s) 2, 449, 703
BceAI ACGGC 1 cut(s) 977
BciVI GTATCC 1 cut(s) 37
BcoDI GTCTC 2 cut(s) 69, 731
BfaI CTAG 2 cut(s) 18, 251
BfmI CTRYAG 1 cut(s) 33
BfuAI ACCTGC 1 cut(s) 559
BfuI GTATCC 1 cut(s) 37
BglII AGATCT 1 cut(s) 480
BisI GCNGC 7 cut(s) 177, 218, 312, 504, 641, 668, 875
BlnI CCTAGG 1 cut(s) 17
BlsI GCNGC 7 cut(s) 178, 219, 313, 505, 642, 669, 876
Bme18I GGWCC 1 cut(s) 837
BmgT120I GGNCC 2 cut(s) 336, 837
BmiI GGNNCC 5 cut(s) 337, 627, 769, 838, 839
BmsI GCATC 4 cut(s) 298, 421, 682, 703
BpiI GAAGAC 1 cut(s) 149
BpmI CTGGAG 2 cut(s) 242, 248
Bpu10I CCTNAGC 1 cut(s) 194
BpuEI CTTGAG 1 cut(s) 863
Bsa29I ATCGAT 1 cut(s) 755
BsaAI YACGTR 1 cut(s) 968
BsaBI GATNNNNATC 1 cut(s) 57
BsaI GGTCTC 2 cut(s) 69, 731
BsaJI CCNNGG 3 cut(s) 17, 703, 816
BsaXI ACNNNNNCTCC 2 cut(s) 629, 659
Bsc4I CCNNNNNNNGG 2 cut(s) 709, 846
Bse1I ACTGG 3 cut(s) 111, 747, 919
Bse21I CCTNAGG 1 cut(s) 772
Bse3DI GCAATG 3 cut(s) 87, 716, 828
Bse8I GATNNNNATC 1 cut(s) 57
BseCI ATCGAT 1 cut(s) 755
BseDI CCNNGG 3 cut(s) 17, 703, 816
BseGI GGATG 2 cut(s) 714, 718
BseJI GATNNNNATC 1 cut(s) 57
BseLI CCNNNNNNNGG 2 cut(s) 709, 846
BseMI GCAATG 3 cut(s) 87, 716, 828
BseNI ACTGG 3 cut(s) 111, 747, 919
BseRI GAGGAG 1 cut(s) 760
BseSI GKGCMC 2 cut(s) 500, 934
BseXI GCAGC 6 cut(s) 163, 229, 298, 515, 652, 679
BshFI GGCC 2 cut(s) 338, 815
BshVI ATCGAT 1 cut(s) 755
BsiHKAI GWGCWC 4 cut(s) 264, 600, 934, 973
BsiSI CCGG 1 cut(s) 765
BslFI GGGAC 1 cut(s) 850
BslI CCNNNNNNNGG 2 cut(s) 709, 846
BsmAI GTCTC 2 cut(s) 69, 731
BsmFI GGGAC 1 cut(s) 850
BsnI GGCC 2 cut(s) 338, 815
Bso31I GGTCTC 2 cut(s) 69, 731
Bsp1286I GDGCHC 5 cut(s) 264, 500, 600, 934, 973
Bsp143I GATC 6 cut(s) 127, 136, 404, 480, 752, 756
Bsp19I CCATGG 1 cut(s) 816
BspACI CCGC 3 cut(s) 874, 916, 994
BspANI GGCC 2 cut(s) 338, 815
BspDI ATCGAT 1 cut(s) 755
BspLI GGNNCC 5 cut(s) 337, 627, 769, 838, 839
BspMI ACCTGC 1 cut(s) 559
BspPI GGATC 2 cut(s) 122, 760
BspQI GCTCTTC 1 cut(s) 369
BspTNI GGTCTC 2 cut(s) 69, 731
BsrDI GCAATG 3 cut(s) 87, 716, 828
BsrI ACTGG 3 cut(s) 111, 747, 919
BssECI CCNNGG 3 cut(s) 17, 703, 816
BssMI GATC 6 cut(s) 127, 136, 404, 480, 752, 756
BssSI CACGAG 1 cut(s) 927
BssT1I CCWWGG 3 cut(s) 17, 703, 816
Bst2BI CACGAG 1 cut(s) 927
Bst4CI ACNGT 2 cut(s) 366, 902
Bst6I CTCTTC 2 cut(s) 153, 369
BstAPI GCANNNNNTGC 3 cut(s) 431, 692, 895
BstBAI YACGTR 1 cut(s) 968
BstC8I GCNNGC 4 cut(s) 159, 270, 990, 994
BstDSI CCRYGG 1 cut(s) 816
BstF5I GGATG 2 cut(s) 714, 718
BstHHI GCGC 1 cut(s) 469
BstKTI GATC 6 cut(s) 130, 139, 407, 483, 755, 759
BstMAI GTCTC 2 cut(s) 69, 731
BstMBI GATC 6 cut(s) 127, 136, 404, 480, 752, 756
BstMWI GCNNNNNNNGC 9 cut(s) 98, 376, 385, 431, 509, 604, 692, 895, 938
BstSFI CTRYAG 1 cut(s) 33
BstSLI GKGCMC 2 cut(s) 500, 934
BstV1I GCAGC 6 cut(s) 163, 229, 298, 515, 652, 679
BstV2I GAAGAC 1 cut(s) 149
BstX2I RGATCY 2 cut(s) 127, 480
BstXI CCANNNNNNTGG 1 cut(s) 823
BstYI RGATCY 2 cut(s) 127, 480
Bsu15I ATCGAT 1 cut(s) 755
Bsu36I CCTNAGG 1 cut(s) 772
BsuI GTATCC 1 cut(s) 37
BsuRI GGCC 2 cut(s) 338, 815
BsuTUI ATCGAT 1 cut(s) 755
BtgI CCRYGG 1 cut(s) 816
BtsCI GGATG 2 cut(s) 714, 718
BtsI GCAGTG 1 cut(s) 884
BtsIMutI CAGTG 3 cut(s) 118, 754, 884
BveI ACCTGC 1 cut(s) 559
Cac8I GCNNGC 4 cut(s) 159, 270, 990, 994
CaiI CAGNNNCTG 1 cut(s) 220
CfoI GCGC 1 cut(s) 469
Cfr13I GGNCC 2 cut(s) 336, 837
ClaI ATCGAT 1 cut(s) 755
CviAII CATG 5 cut(s) 340, 422, 802, 817, 947
DpnI GATC 6 cut(s) 129, 138, 406, 482, 754, 758
DpnII GATC 6 cut(s) 127, 136, 404, 480, 752, 756
EaeI YGGCCR 1 cut(s) 813
Eam1104I CTCTTC 2 cut(s) 153, 369
EarI CTCTTC 2 cut(s) 153, 369
Ecl136II GAGCTC 2 cut(s) 262, 598
Eco130I CCWWGG 3 cut(s) 17, 703, 816
Eco24I GRGCYC 2 cut(s) 264, 600
Eco31I GGTCTC 2 cut(s) 69, 731
Eco32I GATATC 1 cut(s) 28
Eco47I GGWCC 1 cut(s) 837
Eco53kI GAGCTC 2 cut(s) 262, 598
Eco57I CTGAAG 2 cut(s) 257, 512
Eco81I CCTNAGG 1 cut(s) 772
EcoICRI GAGCTC 2 cut(s) 262, 598
EcoO109I RGGNCCY 1 cut(s) 837
EcoRV GATATC 1 cut(s) 28
EcoT14I CCWWGG 3 cut(s) 17, 703, 816
EcoT22I ATGCAT 1 cut(s) 718
EcoT38I GRGCYC 2 cut(s) 264, 600
ErhI CCWWGG 3 cut(s) 17, 703, 816
FaeI CATG 5 cut(s) 343, 425, 805, 820, 950
FaqI GGGAC 1 cut(s) 850
FatI CATG 5 cut(s) 339, 421, 801, 816, 946
FauI CCCGC 2 cut(s) 923, 1001
FauNDI CATATG 1 cut(s) 208
Fnu4HI GCNGC 7 cut(s) 177, 218, 312, 504, 641, 668, 875
FokI GGATG 2 cut(s) 721, 725
FriOI GRGCYC 2 cut(s) 264, 600
Fsp4HI GCNGC 7 cut(s) 177, 218, 312, 504, 641, 668, 875
FspBI CTAG 2 cut(s) 18, 251
GlaI GCGC 1 cut(s) 468
GluI GCNGC 7 cut(s) 177, 218, 312, 504, 641, 668, 875
GsuI CTGGAG 2 cut(s) 242, 248
HaeIII GGCC 2 cut(s) 338, 815
HapII CCGG 1 cut(s) 765
HhaI GCGC 1 cut(s) 469
Hin1II CATG 5 cut(s) 343, 425, 805, 820, 950
Hin6I GCGC 1 cut(s) 467
HinP1I GCGC 1 cut(s) 467
HincII GTYRAC 1 cut(s) 243
HindII GTYRAC 1 cut(s) 243
HindIII AAGCTT 2 cut(s) 605, 830
HinfI GANTC 7 cut(s) 58, 107, 145, 244, 285, 382, 459
HpaII CCGG 1 cut(s) 765
Hpy166II GTNNAC 3 cut(s) 243, 415, 932
Hpy188I TCNGA 6 cut(s) 106, 141, 237, 595, 633, 975
Hpy188III TCNNGA 5 cut(s) 170, 303, 601, 783, 907
Hpy8I GTNNAC 3 cut(s) 243, 415, 932
HpyAV CCTTC 1 cut(s) 487
HpyCH4III ACNGT 2 cut(s) 366, 902
HpyCH4IV ACGT 1 cut(s) 967
HpyCH4V TGCA 8 cut(s) 425, 434, 667, 716, 721, 889, 898, 932
HpyF10VI GCNNNNNNNGC 9 cut(s) 98, 376, 385, 431, 509, 604, 692, 895, 938
HpySE526I ACGT 1 cut(s) 967
Hsp92II CATG 5 cut(s) 343, 425, 805, 820, 950
HspAI GCGC 1 cut(s) 467
KflI GGGWCCC 1 cut(s) 837
Kzo9I GATC 6 cut(s) 127, 136, 404, 480, 752, 756
LguI GCTCTTC 1 cut(s) 369
LmnI GCTCC 5 cut(s) 97, 267, 625, 637, 773
Lsp1109I GCAGC 6 cut(s) 163, 229, 298, 515, 652, 679
LweI GCATC 4 cut(s) 298, 421, 682, 703
MaeI CTAG 2 cut(s) 18, 251
MaeII ACGT 1 cut(s) 967
MaeIII GTNAC 3 cut(s) 113, 613, 776
MalI GATC 6 cut(s) 129, 138, 406, 482, 754, 758
MboI GATC 6 cut(s) 127, 136, 404, 480, 752, 756
MboII GAAGA 6 cut(s) 140, 154, 211, 280, 386, 701
MflI RGATCY 2 cut(s) 127, 480
MhlI GDGCHC 5 cut(s) 264, 500, 600, 934, 973
MlsI TGGCCA 1 cut(s) 815
MluCI AATT 2 cut(s) 390, 868
MluNI TGGCCA 1 cut(s) 815
MlyI GAGTC 2 cut(s) 139, 238
MmeI TCCRAC 1 cut(s) 603
MnlI CCTC 8 cut(s) 166, 189, 552, 572, 639, 685, 781, 838
Mox20I TGGCCA 1 cut(s) 815
Mph1103I ATGCAT 1 cut(s) 718
MscI TGGCCA 1 cut(s) 815
MseI TTAA 3 cut(s) 393, 486, 657
MslI CAYNNNNRTG 3 cut(s) 426, 474, 821
Msp20I TGGCCA 1 cut(s) 815
MspA1I CMGCKG 1 cut(s) 220
MspI CCGG 1 cut(s) 765
MwoI GCNNNNNNNGC 9 cut(s) 98, 376, 385, 431, 509, 604, 692, 895, 938
NcoI CCATGG 1 cut(s) 816
NdeI CATATG 1 cut(s) 208
NdeII GATC 6 cut(s) 127, 136, 404, 480, 752, 756
NlaIII CATG 5 cut(s) 343, 425, 805, 820, 950
NlaIV GGNNCC 5 cut(s) 337, 627, 769, 838, 839
NmuCI GTSAC 2 cut(s) 113, 776
NsiI ATGCAT 1 cut(s) 718
PaqCI CACCTGC 1 cut(s) 559
PciSI GCTCTTC 1 cut(s) 369
PfeI GAWTC 5 cut(s) 58, 107, 285, 382, 459
PflFI GACNNNGTC 1 cut(s) 742
PflMI CCANNNNNTGG 1 cut(s) 709
PkrI GCNGC 7 cut(s) 178, 219, 313, 505, 642, 669, 876
PleI GAGTC 2 cut(s) 139, 238
PpsI GAGTC 2 cut(s) 139, 238
Ppu21I YACGTR 1 cut(s) 968
PpuMI RGGWCCY 1 cut(s) 837
PshBI ATTAAT 1 cut(s) 393
Psp124BI GAGCTC 2 cut(s) 264, 600
Psp5II RGGWCCY 1 cut(s) 837
PspN4I GGNNCC 5 cut(s) 337, 627, 769, 838, 839
PspPI GGNCC 2 cut(s) 336, 837
PspPPI RGGWCCY 1 cut(s) 837
PstNI CAGNNNCTG 1 cut(s) 220
PsuI RGATCY 2 cut(s) 127, 480
PsyI GACNNNGTC 1 cut(s) 742
PvuII CAGCTG 1 cut(s) 220
RseI CAYNNNNRTG 3 cut(s) 426, 474, 821
SacI GAGCTC 2 cut(s) 264, 600
SapI GCTCTTC 1 cut(s) 369
SaqAI TTAA 3 cut(s) 393, 486, 657
SatI GCNGC 7 cut(s) 177, 218, 312, 504, 641, 668, 875
Sau3AI GATC 6 cut(s) 127, 136, 404, 480, 752, 756
Sau96I GGNCC 2 cut(s) 336, 837
SchI GAGTC 2 cut(s) 139, 238
SduI GDGCHC 5 cut(s) 264, 500, 600, 934, 973
SfaNI GCATC 4 cut(s) 298, 421, 682, 703
SfcI CTRYAG 1 cut(s) 33
SinI GGWCC 1 cut(s) 837
SmiMI CAYNNNNRTG 3 cut(s) 426, 474, 821
SmlI CTYRAG 1 cut(s) 842
SmoI CTYRAG 1 cut(s) 842
Sse9I AATT 2 cut(s) 390, 868
SsiI CCGC 3 cut(s) 874, 916, 994
SspMI CTAG 2 cut(s) 18, 251
SstI GAGCTC 2 cut(s) 264, 600
StyI CCWWGG 3 cut(s) 17, 703, 816
TaaI ACNGT 2 cut(s) 366, 902
TaiI ACGT 1 cut(s) 970
TaqI TCGA 2 cut(s) 122, 755
TasI AATT 2 cut(s) 390, 868
TauI GCSGC 1 cut(s) 877
TfiI GAWTC 5 cut(s) 58, 107, 285, 382, 459
Tru1I TTAA 3 cut(s) 393, 486, 657
Tru9I TTAA 3 cut(s) 393, 486, 657
TscAI CASTG 3 cut(s) 118, 754, 891
TseFI GTSAC 2 cut(s) 113, 776
TseI GCWGC 6 cut(s) 176, 217, 311, 503, 640, 667
Tsp45I GTSAC 2 cut(s) 113, 776
TspDTI ATGAA 3 cut(s) 280, 411, 579
TspGWI ACGGA 2 cut(s) 650, 845
TspRI CASTG 3 cut(s) 118, 754, 891
Tth111I GACNNNGTC 1 cut(s) 742
Van91I CCANNNNNTGG 1 cut(s) 709
VneI GTGCAC 1 cut(s) 930
VpaK11BI GGWCC 1 cut(s) 837
VspI ATTAAT 1 cut(s) 393
XcmI CCANNNNNNNNNTGG 3 cut(s) 94, 323, 530
XmaJI CCTAGG 1 cut(s) 17
XspI CTAG 2 cut(s) 18, 251
Zsp2I ATGCAT 1 cut(s) 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.