Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001056

Physical Location & Seq

Genomic Coordinates Forward (+)

55267754 .. 55277452

Gene Structure 9699 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030099

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGGCTGATAGTCCTAGGACTGATATTTCTACAGATGTGGATACTGATGATAAGAATCAAAGGTATGATAGAGATCAATATGCCATCACTGCGGCGGTTTCGGATTCCAGTGATAAATCAAAAGACCCAAAGGATCAGAAGACTCTTCGTAGGCTTGCTCAAAATCGAGAGGCTGCAAGAAAAAGTCGGTTGAGGAAGAAAGCATATGTTCAGCAGCTGGAGACTAGTCGTTTGAAGCTGAGTCAACTAGAACAAGAGCTTCAGCGAGCCAGACAGCAGGGAATCTTCATATCCAGCTCAGGAGGAGACGCTGCTCATTCAACAAGTGGAAATGGGGCCATGGCATTTGATGTGGAATATGGGCGGTGGCTGGAAGATCAAAATCGACAAATTAATGAACTGAGATCCGCTGTAAATTCTCATGCAAGTGATGCAGAGCTTCGTATTATTGTAGATGGAATCTTGGCACATTATGATGACATCTTTAGGCTGAAGGGTACAGCGGCTAAAGCTGATGTATTCCATTTGTTGTCTGGAATGTGGAAAACACCTGCAGAAAGGTGTTTCTTGTGGCTTGGTGGTTTTCGTTCGTCTGAGGTCCTGAAGCTTCTTGTTAATCAGTTAGAGCCTCTGACAGAGCAGCAGTTGATGGGGATTACTAATTTGCAGCAATCGTCCCAACAGGCAGAAGATGCATTATCTCAAGGGATGGAGGCCTTGCAACAATCTCTAGCTGAGACTTTGTCCAGTGGATCTCTTGGATCCACAGGTTCGTCTGGTAATGTTGCAAACTACATGGGTCAAATGGCCATGGCAATGGGAAAGCTAGGGACTCTTGAAGGGTTTATCCGCCAGGCTGACAATTTGCGGCAACAAACACTGCAACAAATGCATCGTATCTTGACAACTCGCCAGGGCTGCTCTTCGGGTTTGTCTTCAACCCTCTTGAGTCCATCAATCGTGGATTTCATTGTTCTATTTATCGAATTGGTTCATGTTGGTGGCGATGAAGACACAATTTCCTACCAGACCTCCTCCACCGTCTTCCGCCTCGGCGGAGGCGCTATTGTTGTAGACGTCGCGGAAGAAGCCGTCGACGGTCATCGAGCCCAGCTAGATTGGTGTGGGATTGGCCGTGTTAATGTAGCTGGTGGTGGTGGTGTGGTGTTTCGGGTTGAAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009627 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0042802 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045087 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DOG1 bZIP_1 bZIP_2

Protein Analysis

395

Amino Acids

43.15

Weight (kDa)

5.61

Isoelectric Point (pI)

47.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_1	PF00170	45 - 87	3.5e-07	bZIP transcription factor
DOG1	PF14144	130 - 205	8.9e-33	Seed dormancy control

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT3G12250 AT5G06950 AT5G06950 AT5G06950 AT5G06950 AT5G06950 AT5G06960 AT5G06960 AT5G06960
fragaria_vesca	FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_6g25330 FvH4_7g03530
malus_domestica	MD02G1279400.v1.1 MD07G1047300.v1.1 MD12G1096400.v1.1 MD14G1089200.v1.1
prunus_persica	Prupe.2G041300_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1 Prupe.7G037900_v2.0.a1
pyrus_communis	pycom02g23960 pycom07g03420 pycom12g08570 pycom14g07870
rosa_chinensis	RchiOBHm_Chr1g0325831 RchiOBHm_Chr2g0125681
rosa_laevigata	RLG00000018877 RLG00000030099
rosa_multiflora	Rmu_sc0013657.1_g000002 Rmu_ssc0000055.1_g000021
rosa_roxburghii	Rroxscaffold_2G00117830 Rroxscaffold_4G00324240
rosa_rugosa	Rorug01G0055400 Rorug02G0258500 Rorug02G0258600.1 Rorug02G0258700 Rorug02G0258700 Rorug02G0258700
rosa_samantha	Rh1AG071800 Rh1BG058700 Rh1CG071100 Rh1DG075900 Rh2AG317000 Rh2BG324900 Rh2CG306800
rosa_wichuraiana	Rw1G005840 Rw2G025630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	559
AatII	GACGTC	1 cut(s)	1080
Acc36I	ACCTGC	1 cut(s)	559
AccI	GTMKAC	2 cut(s)	1074, 1095
AccII	CGCG	1 cut(s)	1082
AclWI	GGATC	5 cut(s)	141, 399, 756, 760, 769
AcoI	YGGCCR	2 cut(s)	807, 1132
AcsI	RAATTY	1 cut(s)	415
AcuI	CTGAAG	3 cut(s)	245, 512, 623
AcyI	GRCGYC	1 cut(s)	1077
AfaI	GTAC	1 cut(s)	499
AgsI	TTSAA	5 cut(s)	235, 321, 839, 939, 1178
AhlI	ACTAGT	1 cut(s)	224
AjnI	CCWGG	2 cut(s)	852, 912
Alw26I	GTCTC	3 cut(s)	215, 300, 731
AlwI	GGATC	5 cut(s)	141, 399, 756, 760, 769
AlwNI	CAGNNNCTG	1 cut(s)	217
AoxI	GGCC	4 cut(s)	336, 714, 807, 1132
ApeKI	GCWGC	6 cut(s)	173, 214, 311, 640, 667, 918
ApoI	RAATTY	1 cut(s)	415
ArsI	GACNNNNNNTTYG	2 cut(s)	214, 246
AseI	ATTAAT	1 cut(s)	393
Asp700I	GAANNNNTTC	1 cut(s)	990
AspA2I	CCTAGG	1 cut(s)	14
AspLEI	GCGC	1 cut(s)	1064
AspS9I	GGNCC	2 cut(s)	336, 598
AvaII	GGWCC	1 cut(s)	598
AvrII	CCTAGG	1 cut(s)	14
BalI	TGGCCA	1 cut(s)	809
BamHI	GGATCC	1 cut(s)	761
BanII	GRGCYC	1 cut(s)	1111
BbsI	GAAGAC	4 cut(s)	146, 927, 1017, 1036
BbvI	GCAGC	6 cut(s)	160, 226, 298, 652, 679, 905
BccI	CCATC	5 cut(s)	92, 449, 643, 703, 961
BceAI	ACGGC	2 cut(s)	1076, 1119
BciT130I	CCWGG	2 cut(s)	854, 914
BciVI	GTATCC	1 cut(s)	34
BcoDI	GTCTC	3 cut(s)	215, 300, 731
BcuI	ACTAGT	1 cut(s)	224
BfaI	CTAG	6 cut(s)	15, 225, 248, 731, 827, 1115
BfmI	CTRYAG	2 cut(s)	30, 552
BfoI	RGCGCY	1 cut(s)	1065
BfuAI	ACCTGC	1 cut(s)	559
BfuI	GTATCC	1 cut(s)	34
BisI	GCNGC	9 cut(s)	93, 174, 215, 312, 504, 641, 668, 869, 919
BlnI	CCTAGG	1 cut(s)	14
BlsI	GCNGC	9 cut(s)	94, 175, 216, 313, 505, 642, 669, 870, 920
Bme1390I	CCNGG	2 cut(s)	854, 914
Bme18I	GGWCC	1 cut(s)	598
BmgT120I	GGNCC	2 cut(s)	336, 598
BmiI	GGNNCC	2 cut(s)	337, 763
BmrFI	CCNGG	2 cut(s)	854, 914
BmsI	GCATC	3 cut(s)	421, 682, 901
BpiI	GAAGAC	4 cut(s)	146, 927, 1017, 1036
BpmI	CTGGAG	1 cut(s)	239
Bpu10I	CCTNAGC	1 cut(s)	298
BpuEI	CTTGAG	2 cut(s)	687, 967
BsaBI	GATNNNNATC	3 cut(s)	54, 72, 381
BsaHI	GRCGYC	1 cut(s)	1077
BsaJI	CCNNGG	5 cut(s)	14, 339, 810, 913, 1051
BsaXI	ACNNNNNCTCC	2 cut(s)	1016, 1046
Bse1I	ACTGG	2 cut(s)	108, 747
Bse3DI	GCAATG	1 cut(s)	822
Bse8I	GATNNNNATC	3 cut(s)	54, 72, 381
BseBI	CCWGG	2 cut(s)	854, 914
BseDI	CCNNGG	5 cut(s)	14, 339, 810, 913, 1051
BseGI	GGATG	1 cut(s)	714
BseJI	GATNNNNATC	3 cut(s)	54, 72, 381
BseMI	GCAATG	1 cut(s)	822
BseMII	CTCAG	5 cut(s)	230, 312, 392, 585, 726
BseNI	ACTGG	2 cut(s)	108, 747
BseRI	GAGGAG	2 cut(s)	318, 1024
BseXI	GCAGC	6 cut(s)	160, 226, 298, 652, 679, 905
BseYI	CCCAGC	1 cut(s)	1110
Bsh1236I	CGCG	1 cut(s)	1082
BshFI	GGCC	4 cut(s)	338, 716, 809, 1134
BslFI	GGGAC	2 cut(s)	661, 844
BsmAI	GTCTC	3 cut(s)	215, 300, 731
BsmBI	CGTCTC	1 cut(s)	300
BsmFI	GGGAC	2 cut(s)	661, 844
BsnI	GGCC	4 cut(s)	338, 716, 809, 1134
Bsp1286I	GDGCHC	1 cut(s)	1111
Bsp143I	GATC	6 cut(s)	73, 133, 376, 404, 752, 761
Bsp19I	CCATGG	2 cut(s)	339, 810
BspANI	GGCC	4 cut(s)	338, 716, 809, 1134
BspCNI	CTCAG	5 cut(s)	231, 311, 393, 586, 727
BspFNI	CGCG	1 cut(s)	1082
BspLI	GGNNCC	2 cut(s)	337, 763
BspMAI	CTGCAG	1 cut(s)	556
BspMI	ACCTGC	1 cut(s)	559
BspPI	GGATC	5 cut(s)	141, 399, 756, 760, 769
BspQI	GCTCTTC	1 cut(s)	928
BsrDI	GCAATG	1 cut(s)	822
BsrI	ACTGG	2 cut(s)	108, 747
BssECI	CCNNGG	5 cut(s)	14, 339, 810, 913, 1051
BssMI	GATC	6 cut(s)	73, 133, 376, 404, 752, 761
BssNI	GRCGYC	1 cut(s)	1077
BssT1I	CCWWGG	3 cut(s)	14, 339, 810
Bst2UI	CCWGG	2 cut(s)	854, 914
Bst4CI	ACNGT	2 cut(s)	1042, 1100
Bst6I	CTCTTC	2 cut(s)	150, 928
BstACI	GRCGYC	1 cut(s)	1077
BstAPI	GCANNNNNTGC	3 cut(s)	431, 692, 889
BstC8I	GCNNGC	2 cut(s)	156, 267
BstDEI	CTNAG	5 cut(s)	239, 298, 401, 594, 735
BstDSI	CCRYGG	2 cut(s)	339, 810
BstF5I	GGATG	1 cut(s)	714
BstFNI	CGCG	1 cut(s)	1082
BstH2I	RGCGCY	1 cut(s)	1065
BstHHI	GCGC	1 cut(s)	1064
BstKTI	GATC	6 cut(s)	76, 136, 379, 407, 755, 764
BstMAI	GTCTC	3 cut(s)	215, 300, 731
BstMBI	GATC	6 cut(s)	73, 133, 376, 404, 752, 761
BstMWI	GCNNNNNNNGC	7 cut(s)	89, 431, 509, 692, 889, 918, 1088
BstNI	CCWGG	2 cut(s)	854, 914
BstSCI	CCNGG	2 cut(s)	852, 912
BstSFI	CTRYAG	2 cut(s)	30, 552
BstUI	CGCG	1 cut(s)	1082
BstV1I	GCAGC	6 cut(s)	160, 226, 298, 652, 679, 905
BstV2I	GAAGAC	4 cut(s)	146, 927, 1017, 1036
BstX2I	RGATCY	3 cut(s)	404, 752, 761
BstXI	CCANNNNNNTGG	1 cut(s)	817
BstYI	RGATCY	3 cut(s)	404, 752, 761
BsuI	GTATCC	1 cut(s)	34
BsuRI	GGCC	4 cut(s)	338, 716, 809, 1134
BtgI	CCRYGG	2 cut(s)	339, 810
BtgZI	GCGATG	1 cut(s)	1020
BtsCI	GGATG	1 cut(s)	714
BtsI	GCAGTG	2 cut(s)	87, 878
BtsIMutI	CAGTG	4 cut(s)	87, 115, 754, 878
BveI	ACCTGC	1 cut(s)	559
Cac8I	GCNNGC	2 cut(s)	156, 267
CaiI	CAGNNNCTG	1 cut(s)	217
CfoI	GCGC	1 cut(s)	1064
Cfr13I	GGNCC	2 cut(s)	336, 598
CseI	GACGC	1 cut(s)	317
Csp6I	GTAC	1 cut(s)	498
CviAII	CATG	5 cut(s)	340, 422, 796, 811, 995
CviQI	GTAC	1 cut(s)	498
DdeI	CTNAG	5 cut(s)	239, 298, 401, 594, 735
DpnI	GATC	6 cut(s)	75, 135, 378, 406, 754, 763
DpnII	GATC	6 cut(s)	73, 133, 376, 404, 752, 761
EaeI	YGGCCR	2 cut(s)	807, 1132
Eam1104I	CTCTTC	2 cut(s)	150, 928
EarI	CTCTTC	2 cut(s)	150, 928
EciI	GGCGGA	3 cut(s)	839, 1037, 1071
Eco130I	CCWWGG	3 cut(s)	14, 339, 810
Eco147I	AGGCCT	1 cut(s)	716
Eco24I	GRGCYC	1 cut(s)	1111
Eco47I	GGWCC	1 cut(s)	598
Eco57I	CTGAAG	3 cut(s)	245, 512, 623
EcoO109I	RGGNCCY	1 cut(s)	598
EcoRII	CCWGG	2 cut(s)	852, 912
EcoT14I	CCWWGG	3 cut(s)	14, 339, 810
EcoT22I	ATGCAT	2 cut(s)	697, 894
EcoT38I	GRGCYC	1 cut(s)	1111
ErhI	CCWWGG	3 cut(s)	14, 339, 810
Esp3I	CGTCTC	1 cut(s)	300
FaeI	CATG	5 cut(s)	343, 425, 799, 814, 998
FaqI	GGGAC	2 cut(s)	661, 844
FatI	CATG	5 cut(s)	339, 421, 795, 810, 994
FauNDI	CATATG	1 cut(s)	205
FblI	GTMKAC	2 cut(s)	1074, 1095
Fnu4HI	GCNGC	9 cut(s)	93, 174, 215, 312, 504, 641, 668, 869, 919
FokI	GGATG	1 cut(s)	721
FriOI	GRGCYC	1 cut(s)	1111
Fsp4HI	GCNGC	9 cut(s)	93, 174, 215, 312, 504, 641, 668, 869, 919
FspBI	CTAG	6 cut(s)	15, 225, 248, 731, 827, 1115
GlaI	GCGC	1 cut(s)	1063
GluI	GCNGC	9 cut(s)	93, 174, 215, 312, 504, 641, 668, 869, 919
GsaI	CCCAGC	1 cut(s)	1114
GsuI	CTGGAG	1 cut(s)	239
HaeII	RGCGCY	1 cut(s)	1065
HaeIII	GGCC	4 cut(s)	338, 716, 809, 1134
HgaI	GACGC	1 cut(s)	317
HhaI	GCGC	1 cut(s)	1064
Hin1I	GRCGYC	1 cut(s)	1077
Hin1II	CATG	5 cut(s)	343, 425, 799, 814, 998
Hin6I	GCGC	1 cut(s)	1062
HinP1I	GCGC	1 cut(s)	1062
HincII	GTYRAC	2 cut(s)	245, 1096
HindII	GTYRAC	2 cut(s)	245, 1096
HindIII	AAGCTT	1 cut(s)	605
HinfI	GANTC	8 cut(s)	55, 104, 142, 241, 282, 459, 832, 949
Hpy166II	GTNNAC	3 cut(s)	245, 1075, 1096
Hpy188I	TCNGA	4 cut(s)	103, 138, 595, 633
Hpy188III	TCNNGA	7 cut(s)	167, 300, 534, 601, 836, 901, 946
Hpy8I	GTNNAC	3 cut(s)	245, 1075, 1096
Hpy99I	CGWCG	3 cut(s)	1082, 1097, 1100
HpyAV	CCTTC	2 cut(s)	487, 833
HpyCH4III	ACNGT	2 cut(s)	1042, 1100
HpyCH4IV	ACGT	1 cut(s)	1077
HpyF10VI	GCNNNNNNNGC	7 cut(s)	89, 431, 509, 692, 889, 918, 1088
HpyF3I	CTNAG	5 cut(s)	239, 298, 401, 594, 735
HpySE526I	ACGT	1 cut(s)	1077
Hsp92I	GRCGYC	1 cut(s)	1077
Hsp92II	CATG	5 cut(s)	343, 425, 799, 814, 998
HspAI	GCGC	1 cut(s)	1062
Kzo9I	GATC	6 cut(s)	73, 133, 376, 404, 752, 761
LguI	GCTCTTC	1 cut(s)	928
Lsp1109I	GCAGC	6 cut(s)	160, 226, 298, 652, 679, 905
LweI	GCATC	3 cut(s)	421, 682, 901
MaeI	CTAG	6 cut(s)	15, 225, 248, 731, 827, 1115
MaeII	ACGT	1 cut(s)	1077
MalI	GATC	6 cut(s)	75, 135, 378, 406, 754, 763
MboI	GATC	6 cut(s)	73, 133, 376, 404, 752, 761
MflI	RGATCY	3 cut(s)	404, 752, 761
MhlI	GDGCHC	1 cut(s)	1111
MlsI	TGGCCA	1 cut(s)	809
MluCI	AATT	6 cut(s)	390, 415, 661, 862, 986, 1017
MluNI	TGGCCA	1 cut(s)	809
MlyI	GAGTC	4 cut(s)	136, 250, 826, 958
Mox20I	TGGCCA	1 cut(s)	809
Mph1103I	ATGCAT	2 cut(s)	697, 894
MroXI	GAANNNNTTC	1 cut(s)	990
MscI	TGGCCA	1 cut(s)	809
MseI	TTAA	3 cut(s)	393, 615, 1140
MslI	CAYNNNNRTG	4 cut(s)	426, 474, 815, 999
Msp20I	TGGCCA	1 cut(s)	809
MspA1I	CMGCKG	3 cut(s)	217, 410, 503
MspR9I	CCNGG	2 cut(s)	854, 914
MvaI	CCWGG	2 cut(s)	854, 914
MvnI	CGCG	1 cut(s)	1082
MwoI	GCNNNNNNNGC	7 cut(s)	89, 431, 509, 692, 889, 918, 1088
NcoI	CCATGG	2 cut(s)	339, 810
NdeI	CATATG	1 cut(s)	205
NdeII	GATC	6 cut(s)	73, 133, 376, 404, 752, 761
NlaIII	CATG	5 cut(s)	343, 425, 799, 814, 998
NlaIV	GGNNCC	2 cut(s)	337, 763
NmeAIII	GCCGAG	1 cut(s)	1032
NsiI	ATGCAT	2 cut(s)	697, 894
PaqCI	CACCTGC	1 cut(s)	559
PceI	AGGCCT	1 cut(s)	716
PciSI	GCTCTTC	1 cut(s)	928
PdmI	GAANNNNTTC	1 cut(s)	990
PfeI	GAWTC	4 cut(s)	55, 104, 282, 459
PflFI	GACNNNGTC	1 cut(s)	742
PkrI	GCNGC	9 cut(s)	94, 175, 216, 313, 505, 642, 669, 870, 920
PleI	GAGTC	4 cut(s)	136, 249, 826, 957
PpsI	GAGTC	4 cut(s)	136, 249, 826, 957
PpuMI	RGGWCCY	1 cut(s)	598
PshBI	ATTAAT	1 cut(s)	393
Psp5II	RGGWCCY	1 cut(s)	598
Psp6I	CCWGG	2 cut(s)	852, 912
PspFI	CCCAGC	1 cut(s)	1110
PspGI	CCWGG	2 cut(s)	852, 912
PspN4I	GGNNCC	2 cut(s)	337, 763
PspPI	GGNCC	2 cut(s)	336, 598
PspPPI	RGGWCCY	1 cut(s)	598
PstI	CTGCAG	1 cut(s)	556
PstNI	CAGNNNCTG	1 cut(s)	217
PsuI	RGATCY	3 cut(s)	404, 752, 761
PsyI	GACNNNGTC	1 cut(s)	742
PvuII	CAGCTG	1 cut(s)	217
RsaI	GTAC	1 cut(s)	499
RsaNI	GTAC	1 cut(s)	498
RseI	CAYNNNNRTG	4 cut(s)	426, 474, 815, 999
SalI	GTCGAC	1 cut(s)	1094
SapI	GCTCTTC	1 cut(s)	928
SaqAI	TTAA	3 cut(s)	393, 615, 1140
SatI	GCNGC	9 cut(s)	93, 174, 215, 312, 504, 641, 668, 869, 919
Sau3AI	GATC	6 cut(s)	73, 133, 376, 404, 752, 761
Sau96I	GGNCC	2 cut(s)	336, 598
SchI	GAGTC	4 cut(s)	136, 250, 826, 958
ScrFI	CCNGG	2 cut(s)	854, 914
SduI	GDGCHC	1 cut(s)	1111
SfaNI	GCATC	3 cut(s)	421, 682, 901
SfcI	CTRYAG	2 cut(s)	30, 552
SgrDI	CGTCGACG	1 cut(s)	1094
SinI	GGWCC	1 cut(s)	598
SmiMI	CAYNNNNRTG	4 cut(s)	426, 474, 815, 999
SmlI	CTYRAG	2 cut(s)	702, 946
SmoI	CTYRAG	2 cut(s)	702, 946
SpeI	ACTAGT	1 cut(s)	224
Sse9I	AATT	6 cut(s)	390, 415, 661, 862, 986, 1017
SseBI	AGGCCT	1 cut(s)	716
SspMI	CTAG	6 cut(s)	15, 225, 248, 731, 827, 1115
StuI	AGGCCT	1 cut(s)	716
StyD4I	CCNGG	2 cut(s)	852, 912
StyI	CCWWGG	3 cut(s)	14, 339, 810
TaaI	ACNGT	2 cut(s)	1042, 1100
TaiI	ACGT	1 cut(s)	1080
TaqI	TCGA	5 cut(s)	166, 385, 984, 1095, 1105
TasI	AATT	6 cut(s)	390, 415, 661, 862, 986, 1017
TauI	GCSGC	3 cut(s)	95, 506, 871
TfiI	GAWTC	4 cut(s)	55, 104, 282, 459
Tru1I	TTAA	3 cut(s)	393, 615, 1140
Tru9I	TTAA	3 cut(s)	393, 615, 1140
TscAI	CASTG	4 cut(s)	94, 115, 754, 885
TseI	GCWGC	6 cut(s)	173, 214, 311, 640, 667, 918
TspDTI	ATGAA	5 cut(s)	277, 411, 958, 983, 1023
TspRI	CASTG	4 cut(s)	94, 115, 754, 885
Tth111I	GACNNNGTC	1 cut(s)	742
VpaK11BI	GGWCC	1 cut(s)	598
VspI	ATTAAT	1 cut(s)	393
XapI	RAATTY	1 cut(s)	415
XcmI	CCANNNNNNNNNTGG	1 cut(s)	530
XmaJI	CCTAGG	1 cut(s)	14
XmiI	GTMKAC	2 cut(s)	1074, 1095
XmnI	GAANNNNTTC	1 cut(s)	990
XspI	CTAG	6 cut(s)	15, 225, 248, 731, 827, 1115
ZraI	GACGTC	1 cut(s)	1078
Zsp2I	ATGCAT	2 cut(s)	697, 894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.