Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0004774

Physical Location & Seq

Genomic Coordinates Forward (+)

28218886 .. 28226904

Gene Structure 8019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1201700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3258 bp

ATGGGGACTGAAAACCCTAGTCGTCCGAATTTTACTGCAAGACCTGCCACTGCACCTTTTGCGGCTCCTCCTCAAAACATGGTGCCTTTTTCCTCTTCAGGTCCCATGGGTGGACAGGAGGCATATGGTTTTAGACCTCCTCCACCTGTCACGCAACAGACACCTTTTTCATCGTCTGGGCCTGTGGTTGGACCAAATGCCTCTAACTTCAGACCTACTCCATCGGTTCCTCCACAGACTAATGTGCCGTTCTCATCATCTGGATCTGCAGTTGGAACACAAGCCTCTCCTTTTAGGCCTACCCTGCCAGGTAGGTTTCATGATCCATCTGTGCCTCCTCCACCAACTTCAAGTGTCCCGCCAAGTGTTGGACCTTACTCCCGTTTCCCAACACCACAATATCCACCAGCAGTGCAAGCACCCACTGCACGTGGTCCACCTGTAGGCCAAATGCCATATCAACTTCCTCCTGGTCAAGCACCATTTCAACGACCACAACAGCAGATACCTTCTGTGCCAATGGGACCTCCACCTCAAAGCATTAATTCTGCACCACCAAGTGTGAATGCTTTTCAGTCTCCATCAGATTCATCATTCCCAGCTTCCCTACCAAATGCTCAGACATCTCTTCCTGGATTTCCCCGTAAGCAGTCTAGTGCAGATTCACAAGCCCCACCAGCTCAGTCTCCATTTCTTACTCATCAAGGAAGCTATGCAGCTGCTCCACCAGCAGTGTCCTCTCCTTTTGCAGCTCACCAAGGAGGTTATGCTCCACCTACGCAAGGTGCAGCTCCATTGGGTATGTCAAGGGACCACATGCAACATCATGGTTCTGGACCTCCCGTTGGTGCTGTCCAAGCCTTGACAGACGACTTCAGTGCACTATCTATTGGATCTGTTCCTGGATCAATTGAACCTGGACTCGACCCTAAAGCTTTGCCAAGGCCTTTGGCTGGTGACGTGGAGCCAAAATCACTTGCTCAGATGTACCCCATGAATTGCAATCCTAGATTTCTACGGTTTACAACTGGTGCAATACCAAGTTCTCAGTCTTTGTCTTCAAGGTGGCATTTACCTTTGGGAGCAGTTGTTTGTCCACTTGCTGAACCACCTGATGGGGAGGAAGTTCCAATTGTTAATTTTGGTTCAGCCGGGATTATTCGCTGTAGAAGATGTCGGACGTATGTGAACCCCTATGTGACATTTACAGATGCTGGAAGAAAGTGGCGTTGCAACATTTGTGCTTTACTTAATGATGTCCCTGGGGATTACTTTGCTCATTTGGATGCCATTGGCAGAAGAATTGATTTGGATCAACGACCTGAGCTTACACAGGGTAGTGTGGAATTTGTTGCTCCAACTGAATATATGGTCCGGCCTCCTATGCCGCCACTGTATTTTTTCCTCATTGACGTTTCGATATCTGCTGTCAGAAGTGGTATGATTGAGGTTGTGGCCCAAACTATCCGGTCATGCTTGGATGAGCTACCTGGCTTCCCCAGAACACAAATTGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAACATGAAATCTTCTTTGACTCAGCCTCAAATGATGGTGGTCTCAGATCTAGATGATGTATTTATTCCATTGCCAGATGATCTTCTTGTTAATCTATCTGAATCAAGAACTGTAGTGGAGAGCTTCCTAGATAGCTTGCCTTCTATGTTTCAAGACAACGTGAATGTGGAGTCTGCTTTTGGTCCAGCTCTTAAAGCCTCGCTTATGCTTATGAGCAACCTTGGGGGAAAATTGTTAATTTTTCAAAATACACTGCCATCTCTTGGTGTTGGTCGCTTGAAGTTGCGTGGAGATGATCTTCGTGTCTATGGCTCTGATAAAGAGCATCCACTAAGACTACCAGAGGATCCTTTCTACAAGCAGATGGCTGCAGAATTTACCAAGTTCCAGATAGGTGTGGATGTATATGCCTTCAGTGACAAGTACACGGATATAGCTTCATTAGGTACTCTGGCAAAATATACCGGGGGTCAGGTGTATTATTACCCGAATTTTCAATCTACCATTCATGGATATAAGTTGAAACATGAATTAGCAAGAGATCTTACTAGGGAAACTGCCTGGGAAGCAGTGATGCGCATAAGATGTGGGAAAGGAGTGCGCTTTACGTCTTATCATGGGAACTTTATGCTAAGGTCCACAGACTTATTAGCACTTCCTGCTGTAGATTGTGATAAAGCATTTGCGATGCAGTTATCTCTTGAAGAGACGCTACTAACTATTCAGACAGTATATTTCCAAGTTGCCTTGCTATACACTGCATCCTGCGGAGAGAGGCGTATTAGAGTACATACAGCAGCAGTACCGGTGGTTACAGATCTGTCTGAGATGTATCGGCAGGCTGATACTGGTGCCATTGTCACCTTGCTTTCCAGGCTAGCAATTGAGAAAACTTTGTCCCATAAGTTGGAAGATGCTCGGAACTCTTTGCAGCTAAGAATTGTCAAAGCCCTCAAAGAATTTCGAAATCTCTATGCCGTACAACACCGCTTAGGAGGGAAGATGATATACTCAGAGTCTCTGAAGTTCTTGCCTTTGTATGGATTGGCACTTTGTAAATCAGCACCTCTTCGTGGGGGGTATGCAGATGTGTCACTTGATGAACGTTGTGCGGCAGGGCACACAATGATGACCTTACCAGTTAAAAAATTGTTGAAGCTCCTATATCCTAGTTTAATACGGCTCGATGAGTATCTTTTGAAGGCGTCTTCTGAAGCTGATGACGTCAAAATCATAGAGAAGAGGTTACCATTACTTGCTGAGAGCTTAGATTTCAGAGGCCTTTATATATTCGATGATGGGTTTCGCTATGTTCTATGGTTTGGTAGAGTTCTTCCACCTGATATAGCTAAGAATCTACTTGGGCCTGACTTTGCAGCAGAGTTATCAAAGGTTACCCTTCGTGAGCACGATAATGAAATGTCAAAGAAGCTAATGAGGATACTAAAGAAACTTAGAGAAAGTGATCCTTCATATTACCAGTTGTGTCATCTTGTAAGACAAGGTGAGCAGCCCCGAGAAGGCCATCTTATACTCGCCAATCTTGTTGAGGAGCAGATGGGTGGAAGCAATGGTTATGTTGATTGGATAATACAAGTACACCGGCAAGTCCAGCAAAATCCGATGTTTATTAAGCTGATAAGATGCCTCATCTGTAGAGTGGTCGAGCATTATTTACCTGGAAAAAATAGTGATGGAGCATTATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0006275 GO:0006996 GO:0007029 GO:0007030 GO:0007276 GO:0008150 GO:0008156 GO:0008361 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010256 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032504 GO:0032535 GO:0032875 GO:0032876 GO:0044703 GO:0045786 GO:0045934 GO:0048232 GO:0048519 GO:0048523 GO:0048609 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051704 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0071840 GO:0080090 GO:0080119 GO:0090066 GO:0090329 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

1086

Amino Acids

119.06

Weight (kDa)

8.32

Isoelectric Point (pI)

52.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-Sec23_Sec24	PF04810	386 - 424	1.3e-17	Sec23/Sec24 zinc finger
Sec23_trunk	PF04811	461 - 697	2.3e-82	Sec23/Sec24 trunk domain
Sec23_BS	PF08033	703 - 787	8.4e-25	Sec23/Sec24 beta-sandwich domain
Sec23_helical	PF04815	798 - 901	1.4e-23	Sec23/Sec24 helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004774)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07100
fragaria_vesca	FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220
malus_domestica	MD04G1188900.v1.1 MD12G1201700.v1.1
prunus_persica	Prupe.6G306800_v2.0.a1 Prupe.6G306800_v2.0.a1 Prupe.6G306800_v2.0.a1
pyrus_communis	pycom04g16720 pycom04g16730 pycom12g18800 pycom12g18810
rosa_chinensis	RchiOBHm_Chr3g0458141
rosa_laevigata	RLG00000025175
rosa_multiflora	Rmu_sc0019452.1_g000001
rosa_roxburghii	Rroxscaffold_6G00421270
rosa_rugosa	Rorug03G0024700 Rorug03G0024800 Rorug03G0024900 Rorug03G0024900 Rorug03G0025000
rosa_samantha	Rh3AG085700 Rh3BG088400 Rh3CG089000 Rh3DG089400
rosa_wichuraiana	Rw3G007280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1548
AatII	GACGTC	1 cut(s)	2775
Acc16I	TGCGCA	1 cut(s)	2126
Acc36I	ACCTGC	1 cut(s)	52
AccB1I	GGYRCC	2 cut(s)	82, 2399
AccB7I	CCANNNNNTGG	4 cut(s)	368, 1115, 1811, 2455
AciI	CCGC	6 cut(s)	62, 359, 1388, 2316, 2536, 2660
AclI	AACGTT	1 cut(s)	2653
AclWI	GGATC	8 cut(s)	271, 317, 901, 913, 1320, 1889, 1902, 3008
AcsI	RAATTY	5 cut(s)	28, 1346, 1922, 2038, 2507
AcuI	CTGAAG	6 cut(s)	81, 193, 859, 1945, 2591, 2781
AcvI	CACGTG	1 cut(s)	431
AcyI	GRCGYC	2 cut(s)	2753, 2772
AdeI	CACNNNGTG	1 cut(s)	560
AfaI	GTAC	7 cut(s)	989, 1973, 1996, 2337, 2352, 2529, 3147
AgeI	ACCGGT	1 cut(s)	2353
AjiI	CACGTC	1 cut(s)	961
Alw21I	GWGCWC	2 cut(s)	883, 2958
Alw26I	GTCTC	5 cut(s)	582, 690, 1594, 2249, 2571
Alw44I	GTGCAC	1 cut(s)	879
AlwI	GGATC	8 cut(s)	271, 317, 901, 913, 1320, 1889, 1902, 3008
AlwNI	CAGNNNCTG	1 cut(s)	1214
Ama87I	CYCGRG	1 cut(s)	3063
AoxI	GGCC	9 cut(s)	179, 296, 445, 944, 1376, 1455, 2827, 2912, 3070
ApaLI	GTGCAC	1 cut(s)	879
ApeKI	GCWGC	9 cut(s)	716, 719, 749, 788, 1916, 2345, 2479, 2924, 3058
ApoI	RAATTY	5 cut(s)	28, 1346, 1922, 2038, 2507
AseI	ATTAAT	1 cut(s)	543
AsiGI	ACCGGT	1 cut(s)	2353
AspLEI	GCGC	2 cut(s)	2127, 2151
AsuC2I	CCSGG	2 cut(s)	1153, 2014
AsuHPI	GGTGA	4 cut(s)	746, 968, 2401, 3065
AsuII	TTCGAA	1 cut(s)	2512
AsuNHI	GCTAGC	1 cut(s)	2425
AvaI	CYCGRG	1 cut(s)	3063
BaeGI	GKGCMC	2 cut(s)	883, 2670
BamHI	GGATCC	1 cut(s)	1894
BanI	GGYRCC	2 cut(s)	82, 2399
BarI	GAAGNNNNNNTAC	4 cut(s)	2244, 2276, 2540, 2572
BbrPI	CACGTG	1 cut(s)	431
BbsI	GAAGAC	2 cut(s)	1050, 2748
Bbv12I	GWGCWC	2 cut(s)	883, 2958
BbvI	GCAGC	9 cut(s)	706, 728, 761, 800, 1903, 2357, 2491, 2936, 3070
BceAI	ACGGC	3 cut(s)	232, 2510, 2744
BcgI	CGANNNNNNTGC	2 cut(s)	860, 894
BciVI	GTATCC	1 cut(s)	2982
BcnI	CCSGG	2 cut(s)	1153, 2014
BcoDI	GTCTC	5 cut(s)	582, 690, 1594, 2249, 2571
BfaI	CTAG	8 cut(s)	18, 654, 1008, 1598, 1676, 2097, 2426, 2718
BfmI	CTRYAG	7 cut(s)	267, 441, 1165, 1659, 1917, 2211, 3202
BfuAI	ACCTGC	1 cut(s)	52
BfuI	GTATCC	1 cut(s)	2982
BglII	AGATCT	3 cut(s)	1594, 2089, 2365
BmeT110I	CYCGRG	1 cut(s)	3063
BmgBI	CACGTC	1 cut(s)	961
BmiI	GGNNCC	9 cut(s)	66, 84, 103, 228, 525, 812, 966, 1896, 2401
BmsI	GCATC	8 cut(s)	1201, 1276, 1882, 2112, 2226, 2318, 2452, 3182
BmtI	GCTAGC	1 cut(s)	2429
BpiI	GAAGAC	2 cut(s)	1050, 2748
Bpu10I	CCTNAGC	3 cut(s)	1323, 2180, 2539
Bpu14I	TTCGAA	1 cut(s)	2512
BpuMI	CCSGG	2 cut(s)	1153, 2014
BsaAI	YACGTR	1 cut(s)	431
BsaBI	GATNNNNATC	2 cut(s)	1311, 2739
BsaHI	GRCGYC	2 cut(s)	2753, 2772
BsaI	GGTCTC	1 cut(s)	1594
BsaJI	CCNNGG	8 cut(s)	105, 757, 941, 1261, 1262, 1768, 2013, 2109
BsaWI	WCCGGW	2 cut(s)	1467, 2353
BsaXI	ACNNNNNCTCC	2 cut(s)	1074, 1104
Bse118I	RCCGGY	2 cut(s)	2353, 3150
Bse1I	ACTGG	4 cut(s)	1033, 2401, 2687, 3028
Bse3DI	GCAATG	2 cut(s)	1616, 3124
Bse8I	GATNNNNATC	2 cut(s)	1311, 2739
BseDI	CCNNGG	8 cut(s)	105, 757, 941, 1261, 1262, 1768, 2013, 2109
BseGI	GGATG	5 cut(s)	1291, 1486, 1873, 1954, 2309
BseJI	GATNNNNATC	2 cut(s)	1311, 2739
BseMI	GCAATG	2 cut(s)	1616, 3124
BseNI	ACTGG	4 cut(s)	1033, 2401, 2687, 3028
BseRI	GAGGAG	5 cut(s)	57, 60, 129, 327, 3113
BseSI	GKGCMC	2 cut(s)	883, 2670
BseXI	GCAGC	9 cut(s)	706, 728, 761, 800, 1903, 2357, 2491, 2936, 3070
BseYI	CCCAGC	1 cut(s)	598
BsgI	GTGCAG	5 cut(s)	36, 411, 534, 678, 807
BshFI	GGCC	9 cut(s)	181, 298, 447, 946, 1378, 1457, 2829, 2914, 3072
BshNI	GGYRCC	2 cut(s)	82, 2399
BshTI	ACCGGT	1 cut(s)	2353
BsiHKAI	GWGCWC	2 cut(s)	883, 2958
BsiHKCI	CYCGRG	1 cut(s)	3063
BsiSI	CCGG	6 cut(s)	1152, 1375, 1468, 2013, 2354, 3151
BslFI	GGGAC	7 cut(s)	19, 87, 341, 537, 824, 1244, 2431
BsmAI	GTCTC	5 cut(s)	582, 690, 1594, 2249, 2571
BsmBI	CGTCTC	1 cut(s)	2249
BsmFI	GGGAC	7 cut(s)	19, 87, 341, 537, 824, 1244, 2431
BsmI	GAATGC	1 cut(s)	571
BsnI	GGCC	9 cut(s)	181, 298, 447, 946, 1378, 1457, 2829, 2914, 3072
Bso31I	GGTCTC	1 cut(s)	1594
BsoBI	CYCGRG	1 cut(s)	3063
Bsp119I	TTCGAA	1 cut(s)	2512
Bsp1286I	GDGCHC	3 cut(s)	883, 2670, 2958
Bsp19I	CCATGG	1 cut(s)	105
BspACI	CCGC	6 cut(s)	62, 359, 1388, 2316, 2536, 2660
BspANI	GGCC	9 cut(s)	181, 298, 447, 946, 1378, 1457, 2829, 2914, 3072
BspHI	TCATGA	1 cut(s)	319
BspLI	GGNNCC	9 cut(s)	66, 84, 103, 228, 525, 812, 966, 1896, 2401
BspMAI	CTGCAG	2 cut(s)	271, 1921
BspMI	ACCTGC	1 cut(s)	52
BspOI	GCTAGC	1 cut(s)	2429
BspPI	GGATC	8 cut(s)	271, 317, 901, 913, 1320, 1889, 1902, 3008
BspT104I	TTCGAA	1 cut(s)	2512
BspT107I	GGYRCC	2 cut(s)	82, 2399
BspTNI	GGTCTC	1 cut(s)	1594
BsrDI	GCAATG	2 cut(s)	1616, 3124
BsrFI	RCCGGY	2 cut(s)	2353, 3150
BsrI	ACTGG	4 cut(s)	1033, 2401, 2687, 3028
BssAI	RCCGGY	2 cut(s)	2353, 3150
BssECI	CCNNGG	8 cut(s)	105, 757, 941, 1261, 1262, 1768, 2013, 2109
BssNI	GRCGYC	2 cut(s)	2753, 2772
BssT1I	CCWWGG	4 cut(s)	105, 757, 941, 1768
Bst4CI	ACNGT	4 cut(s)	1020, 1395, 1660, 2278
Bst6I	CTCTTC	5 cut(s)	100, 633, 2247, 2622, 2783
BstACI	GRCGYC	2 cut(s)	2753, 2772
BstAPI	GCANNNNNTGC	4 cut(s)	44, 59, 425, 2207
BstBAI	YACGTR	1 cut(s)	431
BstBI	TTCGAA	1 cut(s)	2512
BstC8I	GCNNGC	4 cut(s)	417, 1685, 2388, 2427
BstDSI	CCRYGG	1 cut(s)	105
BstEII	GGTNACC	2 cut(s)	2793, 2941
BstENI	CCTNNNNNAGG	1 cut(s)	780
BstF5I	GGATG	5 cut(s)	1291, 1486, 1873, 1954, 2309
BstHHI	GCGC	2 cut(s)	2127, 2151
BstMAI	GTCTC	5 cut(s)	582, 690, 1594, 2249, 2571
BstNSI	RCATGY	1 cut(s)	820
BstPI	GGTNACC	2 cut(s)	2793, 2941
BstSFI	CTRYAG	7 cut(s)	267, 441, 1165, 1659, 1917, 2211, 3202
BstSLI	GKGCMC	2 cut(s)	883, 2670
BstV1I	GCAGC	9 cut(s)	706, 728, 761, 800, 1903, 2357, 2491, 2936, 3070
BstV2I	GAAGAC	2 cut(s)	1050, 2748
BstX2I	RGATCY	6 cut(s)	263, 893, 1594, 1894, 2089, 2365
BstYI	RGATCY	6 cut(s)	263, 893, 1594, 1894, 2089, 2365
BsuI	GTATCC	1 cut(s)	2982
BsuRI	GGCC	9 cut(s)	181, 298, 447, 946, 1378, 1457, 2829, 2914, 3072
BtgI	CCRYGG	1 cut(s)	105
BtgZI	GCGATG	1 cut(s)	2249
BtrI	CACGTC	1 cut(s)	961
BtsCI	GGATG	5 cut(s)	1291, 1486, 1873, 1954, 2309
BtsI	GCAGTG	7 cut(s)	48, 417, 423, 738, 1799, 2124, 2304
BveI	ACCTGC	1 cut(s)	52
Cac8I	GCNNGC	4 cut(s)	417, 1685, 2388, 2427
CaiI	CAGNNNCTG	1 cut(s)	1214
CciI	TCATGA	1 cut(s)	319
CfoI	GCGC	2 cut(s)	2127, 2151
Cfr10I	RCCGGY	2 cut(s)	2353, 3150
CseI	GACGC	2 cut(s)	2266, 2742
Csp6I	GTAC	7 cut(s)	988, 1972, 1995, 2336, 2351, 2528, 3146
CspAI	ACCGGT	1 cut(s)	2353
CviQI	GTAC	7 cut(s)	988, 1972, 1995, 2336, 2351, 2528, 3146
DraIII	CACNNNGTG	1 cut(s)	560
Eam1104I	CTCTTC	5 cut(s)	100, 633, 2247, 2622, 2783
EarI	CTCTTC	5 cut(s)	100, 633, 2247, 2622, 2783
Eco130I	CCWWGG	4 cut(s)	105, 757, 941, 1768
Eco147I	AGGCCT	3 cut(s)	298, 946, 2829
Eco31I	GGTCTC	1 cut(s)	1594
Eco32I	GATATC	1 cut(s)	1422
Eco57I	CTGAAG	6 cut(s)	81, 193, 859, 1945, 2591, 2781
Eco72I	CACGTG	1 cut(s)	431
Eco88I	CYCGRG	1 cut(s)	3063
Eco91I	GGTNACC	2 cut(s)	2793, 2941
EcoNI	CCTNNNNNAGG	1 cut(s)	780
EcoO109I	RGGNCCY	2 cut(s)	101, 524
EcoO65I	GGTNACC	2 cut(s)	2793, 2941
EcoRV	GATATC	1 cut(s)	1422
EcoT14I	CCWWGG	4 cut(s)	105, 757, 941, 1768
ErhI	CCWWGG	4 cut(s)	105, 757, 941, 1768
Esp3I	CGTCTC	1 cut(s)	2249
FalI	AAGNNNNNCTT	6 cut(s)	1734, 1766, 3001, 3033, 3060, 3092
FaqI	GGGAC	7 cut(s)	19, 87, 341, 537, 824, 1244, 2431
FauI	CCCGC	1 cut(s)	366
FauNDI	CATATG	1 cut(s)	124
FokI	GGATG	5 cut(s)	1298, 1493, 1860, 1961, 2296
FspAI	RTGCGCAY	1 cut(s)	2126
FspBI	CTAG	8 cut(s)	18, 654, 1008, 1598, 1676, 2097, 2426, 2718
FspI	TGCGCA	1 cut(s)	2126
GlaI	GCGC	2 cut(s)	2126, 2150
GsaI	CCCAGC	1 cut(s)	602
HaeIII	GGCC	9 cut(s)	181, 298, 447, 946, 1378, 1457, 2829, 2914, 3072
HapII	CCGG	6 cut(s)	1152, 1375, 1468, 2013, 2354, 3151
HgaI	GACGC	2 cut(s)	2266, 2742
HhaI	GCGC	2 cut(s)	2127, 2151
Hin1I	GRCGYC	2 cut(s)	2753, 2772
Hin6I	GCGC	2 cut(s)	2125, 2149
HinP1I	GCGC	2 cut(s)	2125, 2149
HindIII	AAGCTT	1 cut(s)	933
HinfI	GANTC	8 cut(s)	587, 662, 921, 1567, 1649, 1718, 2564, 2902
HpaII	CCGG	6 cut(s)	1152, 1375, 1468, 2013, 2354, 3151
HphI	GGTGA	4 cut(s)	746, 968, 2401, 3065
Hpy166II	GTNNAC	9 cut(s)	113, 437, 881, 1023, 1097, 1189, 1974, 2187, 3148
Hpy188III	TCNNGA	9 cut(s)	261, 320, 834, 1598, 1653, 1700, 1936, 2249, 2951
Hpy8I	GTNNAC	9 cut(s)	113, 437, 881, 1023, 1097, 1189, 1974, 2187, 3148
HpyAV	CCTTC	7 cut(s)	519, 1698, 1969, 2743, 2957, 3027, 3062
HpyCH4III	ACNGT	4 cut(s)	1020, 1395, 1660, 2278
HpyCH4IV	ACGT	8 cut(s)	430, 960, 1181, 1413, 1707, 2156, 2653, 2772
HpySE526I	ACGT	8 cut(s)	430, 960, 1181, 1413, 1707, 2156, 2653, 2772
Hsp92I	GRCGYC	2 cut(s)	2753, 2772
HspAI	GCGC	2 cut(s)	2125, 2149
Lsp1109I	GCAGC	9 cut(s)	706, 728, 761, 800, 1903, 2357, 2491, 2936, 3070
LweI	GCATC	8 cut(s)	1201, 1276, 1882, 2112, 2226, 2318, 2452, 3182
MaeI	CTAG	8 cut(s)	18, 654, 1008, 1598, 1676, 2097, 2426, 2718
MaeII	ACGT	8 cut(s)	430, 960, 1181, 1413, 1707, 2156, 2653, 2772
MaeIII	GTNAC	9 cut(s)	148, 956, 1198, 1964, 2359, 2407, 2640, 2793, 2941
MfeI	CAATTG	3 cut(s)	909, 1131, 2430
MflI	RGATCY	6 cut(s)	263, 893, 1594, 1894, 2089, 2365
MhlI	GDGCHC	3 cut(s)	883, 2670, 2958
MlyI	GAGTC	4 cut(s)	915, 1561, 1727, 2573
MmeI	TCCRAC	6 cut(s)	169, 253, 349, 1157, 1382, 2436
MseI	TTAA	9 cut(s)	543, 1137, 1251, 1638, 1740, 1784, 2691, 2723, 3180
MslI	CAYNNNNRTG	3 cut(s)	1284, 2675, 2961
MspA1I	CMGCKG	1 cut(s)	719
MspI	CCGG	6 cut(s)	1152, 1375, 1468, 2013, 2354, 3151
MunI	CAATTG	3 cut(s)	909, 1131, 2430
Mva1269I	GAATGC	1 cut(s)	571
NciI	CCSGG	2 cut(s)	1153, 2014
NcoI	CCATGG	1 cut(s)	105
NdeI	CATATG	1 cut(s)	124
NheI	GCTAGC	1 cut(s)	2425
NlaIV	GGNNCC	9 cut(s)	66, 84, 103, 228, 525, 812, 966, 1896, 2401
NmuCI	GTSAC	6 cut(s)	148, 956, 1198, 1964, 2407, 2640
NsbI	TGCGCA	1 cut(s)	2126
NspI	RCATGY	1 cut(s)	820
NspV	TTCGAA	1 cut(s)	2512
PagI	TCATGA	1 cut(s)	319
PasI	CCCWGGG	1 cut(s)	1262
PceI	AGGCCT	3 cut(s)	298, 946, 2829
PctI	GAATGC	1 cut(s)	571
PfeI	GAWTC	4 cut(s)	587, 662, 1649, 2902
PflMI	CCANNNNNTGG	4 cut(s)	368, 1115, 1811, 2455
PfoI	TCCNGGA	2 cut(s)	631, 901
PinAI	ACCGGT	1 cut(s)	2353
PleI	GAGTC	4 cut(s)	915, 1561, 1726, 2572
PmaCI	CACGTG	1 cut(s)	431
PmlI	CACGTG	1 cut(s)	431
PpsI	GAGTC	4 cut(s)	915, 1561, 1726, 2572
Ppu21I	YACGTR	1 cut(s)	431
PpuMI	RGGWCCY	2 cut(s)	101, 524
PshBI	ATTAAT	1 cut(s)	543
PsiI	TTATAA	1 cut(s)	1548
Psp1406I	AACGTT	1 cut(s)	2653
Psp5II	RGGWCCY	2 cut(s)	101, 524
PspCI	CACGTG	1 cut(s)	431
PspEI	GGTNACC	2 cut(s)	2793, 2941
PspFI	CCCAGC	1 cut(s)	598
PspN4I	GGNNCC	9 cut(s)	66, 84, 103, 228, 525, 812, 966, 1896, 2401
PspPPI	RGGWCCY	2 cut(s)	101, 524
PstI	CTGCAG	2 cut(s)	271, 1921
PstNI	CAGNNNCTG	1 cut(s)	1214
PsuI	RGATCY	6 cut(s)	263, 893, 1594, 1894, 2089, 2365
PvuII	CAGCTG	1 cut(s)	719
RsaI	GTAC	7 cut(s)	989, 1973, 1996, 2337, 2352, 2529, 3147
RsaNI	GTAC	7 cut(s)	988, 1972, 1995, 2336, 2351, 2528, 3146
RseI	CAYNNNNRTG	3 cut(s)	1284, 2675, 2961
SaqAI	TTAA	9 cut(s)	543, 1137, 1251, 1638, 1740, 1784, 2691, 2723, 3180
SchI	GAGTC	4 cut(s)	915, 1561, 1727, 2573
SduI	GDGCHC	3 cut(s)	883, 2670, 2958
SfaNI	GCATC	8 cut(s)	1201, 1276, 1882, 2112, 2226, 2318, 2452, 3182
SfcI	CTRYAG	7 cut(s)	267, 441, 1165, 1659, 1917, 2211, 3202
SfuI	TTCGAA	1 cut(s)	2512
SmiMI	CAYNNNNRTG	3 cut(s)	1284, 2675, 2961
SseBI	AGGCCT	3 cut(s)	298, 946, 2829
SsiI	CCGC	6 cut(s)	62, 359, 1388, 2316, 2536, 2660
SspMI	CTAG	8 cut(s)	18, 654, 1008, 1598, 1676, 2097, 2426, 2718
StuI	AGGCCT	3 cut(s)	298, 946, 2829
StyI	CCWWGG	4 cut(s)	105, 757, 941, 1768
TaaI	ACNGT	4 cut(s)	1020, 1395, 1660, 2278
TaiI	ACGT	8 cut(s)	433, 963, 1184, 1416, 1710, 2159, 2656, 2775
TaqI	TCGA	6 cut(s)	924, 1418, 2512, 2733, 2841, 3213
TatI	WGTACW	3 cut(s)	1971, 2335, 3145
TauI	GCSGC	3 cut(s)	65, 1390, 2663
TfiI	GAWTC	4 cut(s)	587, 662, 1649, 2902
Tru1I	TTAA	9 cut(s)	543, 1137, 1251, 1638, 1740, 1784, 2691, 2723, 3180
Tru9I	TTAA	9 cut(s)	543, 1137, 1251, 1638, 1740, 1784, 2691, 2723, 3180
TseFI	GTSAC	6 cut(s)	148, 956, 1198, 1964, 2407, 2640
TseI	GCWGC	9 cut(s)	716, 719, 749, 788, 1916, 2345, 2479, 2924, 3058
Tsp45I	GTSAC	6 cut(s)	148, 956, 1198, 1964, 2407, 2640
TspGWI	ACGGA	1 cut(s)	1991
Van91I	CCANNNNNTGG	4 cut(s)	368, 1115, 1811, 2455
VneI	GTGCAC	1 cut(s)	879
VspI	ATTAAT	1 cut(s)	543
XagI	CCTNNNNNAGG	1 cut(s)	780
XapI	RAATTY	5 cut(s)	28, 1346, 1922, 2038, 2507
XbaI	TCTAGA	1 cut(s)	1597
XceI	RCATGY	1 cut(s)	820
XspI	CTAG	8 cut(s)	18, 654, 1008, 1598, 1676, 2097, 2426, 2718
ZraI	GACGTC	1 cut(s)	2773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.