Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0004774

Physical Location & Seq

Genomic Coordinates Forward (+)

6897934 .. 6905987

Gene Structure 8054 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG089000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGGGACTGAAAATCCTGGTCGACCAAATTTTACTCCAAGACCTACCACTACACCTTTTGCTGCTCCTCCTCGGACCATGACGCCTTTTACATCTTCAGGTCCTGTGGTTGGACAAGAGGCATCTGGTTTTAGACCACCTCCACATACACCTTTCTCTTCGTCTGGGCCTGTGGTTGGATCAGATGTTTCTACCTTCAGACCTACTCCACCAGCTCCTCCACAGGCTACCATGCCTTTCTCATCTTTTGGGCCTGCAGGTGGACCACAGACCTCTCCCTTTAGGCCTAGCACACCAGCTAGGTTTAATGATCCATCCGTGCCTCCTCCACCAACAGCAAATGCCCCACCGACTGCTGGATCTTTCTCCCGTTTCCCGACTCCACCATTTTCTTCAACACCACAGTTTCCTTCGACAGCGCCACCACCCCCTTCCCGTCCTCCACCTATGGGCCAACTACCTTTTCAACCTCCAGGAGGTCAAGCTCCATTTCAACGACCACAGCAGCAGATGCCTTCTGTACAAATGGGATCTCCACCTCAAACTATAAATTCTGCTCCACCAGGTATGAGTCTTCATCAGTCTCCATCAGATTCGTCCTTCCCAGCTCCCCATCCAAAGGCTCAGACATCTTTCCCGGGATATGCACGTGGAAATCCACAAGCCCCACCAGCTCAGTCTCCATTTCTTACTCATCAAGGAGGCTTTCCCGCTCCACCTGCAGCATCTTCCCCTTTCGCTGCTCAGCAAATGGGTTACGGAATACCTCCACCAGTGGCAGCTCCACTGGGTCTGCAGTCGCAACATCCTGGCTCCGGACCCCCACTTGGTGGTGTCCAAGCCTTGACAGAAGACTTCAGCTCATTATCTGTTGGATCTGTTCCCGGATCAATTGAACCTGGAATTGACCCTAAAGCTCTGCCGAGGCCTTTGTGTGGTGATGTGGAGCCAAAACCACTTGCTGAGATGTTCCCCTTGAACTGCAATCCTAGATTTTTAAGGCTTACAACGGGTGCAATACCAAGTTCCCAGTCTTTGTCGTCAAGGTGGCATCTACCTCTGGGTGCTGTTGTTTGTCCACTTGCCGAATCACCTGATGGGGAGGAAGTGCCAGTGGTTAATTTTGGTGCTGCTGGGATTATTCGCTGTAGAAGATGTCGGACATATGTAAACCCATATGTGACATTTACAGATGCTGGAAGAAAGTGGCGTTGCAATATCTGTGCTCTACTTAATGATGTTCCAGGCGATTACTTTGCCAATTTGGATGCCACTGGCAGAAGAATTGATACGGACCAGCGACCTGAGCTTACACATGGTAGTGTGGAATTTGTTGCTCCAACTGAATATATGGTGCGGGCTCCTATGCCGCCACTGTATTTTTTCCTCATCGACGTTTCTTCATCTGCAGTGAGAAGTGGTATGATTGAGGTTGTGGCCCAAACTATTCGGTCATGCTTGGATGACCTGCCTGGCCACCCCAGAACACAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAATATGAAGTCTTCTTTAACTCAGCCTCAAATGATGGTGGTCTCAGATTTGGATGATGTATTTGTCCCATTGCCAGATGATCTTCTGGTCAACTTATCTGAATCAAGAAGTGTTGTGGAGACCTTCCTAGATAGCTTGCCGTCTATGTTCCAGGACAACTCAAATGTGGAGTCTGCTTTTGGTCCAGCTCTTAAAGCCTCACTTATGCTTATGAGTCAACTTGGTGGAAAATTGTTGATTTTTCAAAATACACTTCCATCTCTTGGTGTTGGCCGCTTGAAATTGCGTGGAGATGATCTTCGTGTCTATGGAACAGATAAAGAACATCCTCTAAGACTACCAGAAGATCCTTTCTACAAGCAGATGGCTGCAGAATTTACCAAGTTCCAGATAGGAGTAAACGTATATGCCTTCAGTGACAAGTACACTGATATAGCCTCATTAGGTACTCTGGCAAAATATACTGGGGGTCAGGTGTACTATTACCCAAATTTCCAATCTACCATTCATGGAGAGAAGTTGAGACATGAGTTAGCCAGAGATCTTACTAGGGAAACTGCCTGGGAGGCAGTCATGCGCATAAGATGTGGAAAAGGAGTCCGCTTTACATCTTATCACGGGAACTTTATGCTGAGGTCCACCGATTTATTAGCACTTCCAGCTGTAGATTGTGATAAAGCATTTGCGATGCAGCTCTCACTTGAAGAGACATTACTAACTATTCAAACAGTATACTTCCAAGTAGCTTTACTGTATCCTTCAGCTTTGAATTTTTTAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0006275 GO:0006996 GO:0007029 GO:0007030 GO:0007276 GO:0008150 GO:0008156 GO:0008361 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010256 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032504 GO:0032535 GO:0032875 GO:0032876 GO:0044703 GO:0045786 GO:0045934 GO:0048232 GO:0048519 GO:0048523 GO:0048609 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051704 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0071840 GO:0080090 GO:0080119 GO:0090066 GO:0090329 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

770

Amino Acids

83.0

Weight (kDa)

6.51

Isoelectric Point (pI)

63.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-Sec23_Sec24	PF04810	380 - 418	8.6e-18	Sec23/Sec24 zinc finger
Sec23_trunk	PF04811	455 - 691	1.8e-83	Sec23/Sec24 trunk domain
Sec23_BS	PF08033	697 - 764	1.6e-15	Sec23/Sec24 beta-sandwich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004774)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07100
fragaria_vesca	FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220
malus_domestica	MD04G1188900.v1.1 MD12G1201700.v1.1
prunus_persica	Prupe.6G306800_v2.0.a1 Prupe.6G306800_v2.0.a1 Prupe.6G306800_v2.0.a1
pyrus_communis	pycom04g16720 pycom04g16730 pycom12g18800 pycom12g18810
rosa_chinensis	RchiOBHm_Chr3g0458141
rosa_laevigata	RLG00000025175
rosa_multiflora	Rmu_sc0019452.1_g000001
rosa_roxburghii	Rroxscaffold_6G00421270
rosa_rugosa	Rorug03G0024700 Rorug03G0024800 Rorug03G0024900 Rorug03G0024900 Rorug03G0025000
rosa_samantha	Rh3AG085700 Rh3BG088400 Rh3CG089000 Rh3DG089400
rosa_wichuraiana	Rw3G007280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1530
AarI	CACCTGC	2 cut(s)	248, 727
Acc16I	TGCGCA	1 cut(s)	2108
Acc36I	ACCTGC	3 cut(s)	248, 727, 1476
AccB7I	CCANNNNNTGG	2 cut(s)	830, 1793
AccBSI	CCGCTC	1 cut(s)	713
AccI	GTMKAC	2 cut(s)	22, 2262
AccIII	TCCGGA	1 cut(s)	815
AciI	CCGC	5 cut(s)	711, 1357, 1370, 1804, 2131
AclWI	GGATC	7 cut(s)	187, 305, 367, 538, 883, 895, 1871
AcoI	YGGCCR	2 cut(s)	1474, 1801
AcsI	RAATTY	6 cut(s)	28, 550, 1328, 1904, 2020, 2299
AcuI	CTGAAG	5 cut(s)	81, 181, 841, 1927, 2274
AcvI	CACGTG	1 cut(s)	650
AcyI	GRCGYC	1 cut(s)	83
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	4 cut(s)	522, 1955, 1978, 2009
AjnI	CCWGG	9 cut(s)	16, 472, 562, 808, 898, 1243, 1471, 1680, 2090
AjuI	GAANNNNNNNTTGG	4 cut(s)	447, 479, 2019, 2051
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	6 cut(s)	588, 684, 1576, 1643, 2047, 2231
AlwI	GGATC	7 cut(s)	187, 305, 367, 538, 883, 895, 1871
AlwNI	CAGNNNCTG	2 cut(s)	104, 1196
Ama87I	CYCGRG	1 cut(s)	637
Aor13HI	TCCGGA	1 cut(s)	815
AoxI	GGCC	8 cut(s)	167, 251, 284, 451, 926, 1437, 1474, 1801
ApeKI	GCWGC	8 cut(s)	62, 505, 722, 740, 779, 1130, 1898, 2221
ApoI	RAATTY	6 cut(s)	28, 550, 1328, 1904, 2020, 2299
ArsI	GACNNNNNNTTYG	2 cut(s)	1685, 1717
AspLEI	GCGC	2 cut(s)	421, 2109
AsuC2I	CCSGG	3 cut(s)	638, 639, 885
AsuHPI	GGTGA	2 cut(s)	950, 1083
AvaI	CYCGRG	1 cut(s)	637
AvaII	GGWCC	7 cut(s)	75, 101, 263, 818, 1294, 1712, 2166
BalI	TGGCCA	1 cut(s)	1476
BanII	GRGCYC	1 cut(s)	1363
BarI	GAAGNNNNNNTAC	4 cut(s)	1273, 1305, 2226, 2258
BbrPI	CACGTG	1 cut(s)	650
BbsI	GAAGAC	3 cut(s)	566, 858, 1533
Bbv12I	GWGCWC	1 cut(s)	1228
BbvCI	CCTCAGC	1 cut(s)	2162
BbvI	GCAGC	8 cut(s)	49, 517, 727, 734, 791, 1117, 1885, 2233
BccI	CCATC	7 cut(s)	322, 595, 621, 1091, 1558, 1795, 1888
BceAI	ACGGC	1 cut(s)	1654
BcgI	CGANNNNNNTGC	2 cut(s)	1238, 1272
BciT130I	CCWGG	9 cut(s)	18, 474, 564, 810, 900, 1245, 1473, 1682, 2092
BciVI	GTATCC	1 cut(s)	2295
BcnI	CCSGG	3 cut(s)	638, 639, 885
BcoDI	GTCTC	6 cut(s)	588, 684, 1576, 1643, 2047, 2231
BfaI	CTAG	5 cut(s)	288, 300, 990, 1658, 2079
BfmI	CTRYAG	7 cut(s)	255, 720, 794, 1147, 1407, 1899, 2193
BfoI	RGCGCY	1 cut(s)	422
BfuAI	ACCTGC	3 cut(s)	248, 727, 1476
BfuI	GTATCC	1 cut(s)	2295
BglI	GCCNNNNNGGC	1 cut(s)	2096
BglII	AGATCT	1 cut(s)	2071
BlpI	GCTNAGC	1 cut(s)	744
Bme18I	GGWCC	7 cut(s)	75, 101, 263, 818, 1294, 1712, 2166
BmeT110I	CYCGRG	1 cut(s)	637
BmiI	GGNNCC	4 cut(s)	814, 820, 948, 1362
BmrI	ACTGGG	3 cut(s)	797, 1024, 2004
BmsI	GCATC	7 cut(s)	131, 501, 734, 1060, 1183, 1258, 2208
BmuI	ACTGGG	3 cut(s)	797, 1024, 2004
BpiI	GAAGAC	3 cut(s)	566, 858, 1533
BpmI	CTGGAG	1 cut(s)	456
Bpu10I	CCTNAGC	2 cut(s)	1305, 2162
Bpu1102I	GCTNAGC	1 cut(s)	744
BpuMI	CCSGG	3 cut(s)	638, 639, 885
BsaAI	YACGTR	1 cut(s)	650
BsaHI	GRCGYC	1 cut(s)	83
BsaI	GGTCTC	2 cut(s)	1576, 1643
BsaJI	CCNNGG	4 cut(s)	71, 637, 923, 2091
BsaWI	WCCGGW	1 cut(s)	815
BsaXI	ACNNNNNCTCC	2 cut(s)	1917, 1947
Bse1I	ACTGG	6 cut(s)	773, 792, 1030, 1112, 1279, 1999
Bse3DI	GCAATG	1 cut(s)	1598
BseAI	TCCGGA	1 cut(s)	815
BseBI	CCWGG	9 cut(s)	18, 474, 564, 810, 900, 1245, 1473, 1682, 2092
BseDI	CCNNGG	4 cut(s)	71, 637, 923, 2091
BseGI	GGATG	7 cut(s)	314, 613, 805, 1273, 1468, 1588, 1855
BseMI	GCAATG	1 cut(s)	1598
BseMII	CTCAG	8 cut(s)	638, 689, 758, 954, 1296, 1565, 1587, 2153
BseNI	ACTGG	6 cut(s)	773, 792, 1030, 1112, 1279, 1999
BseRI	GAGGAG	4 cut(s)	57, 60, 207, 315
BseXI	GCAGC	8 cut(s)	49, 517, 727, 734, 791, 1117, 1885, 2233
BseYI	CCCAGC	2 cut(s)	604, 1133
BshFI	GGCC	8 cut(s)	169, 253, 286, 453, 928, 1439, 1476, 1803
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiHKCI	CYCGRG	1 cut(s)	637
BsiSI	CCGG	3 cut(s)	638, 816, 885
BslFI	GGGAC	2 cut(s)	19, 1580
BsmAI	GTCTC	6 cut(s)	588, 684, 1576, 1643, 2047, 2231
BsmFI	GGGAC	2 cut(s)	19, 1580
BsnI	GGCC	8 cut(s)	169, 253, 286, 453, 928, 1439, 1476, 1803
Bso31I	GGTCTC	2 cut(s)	1576, 1643
BsoBI	CYCGRG	1 cut(s)	637
Bsp1286I	GDGCHC	2 cut(s)	1228, 1363
Bsp13I	TCCGGA	1 cut(s)	815
Bsp1407I	TGTACA	1 cut(s)	520
Bsp1720I	GCTNAGC	1 cut(s)	744
BspACI	CCGC	5 cut(s)	711, 1357, 1370, 1804, 2131
BspANI	GGCC	8 cut(s)	169, 253, 286, 453, 928, 1439, 1476, 1803
BspCNI	CTCAG	8 cut(s)	637, 688, 757, 955, 1297, 1564, 1586, 2154
BspEI	TCCGGA	1 cut(s)	815
BspLI	GGNNCC	4 cut(s)	814, 820, 948, 1362
BspMAI	CTGCAG	5 cut(s)	259, 724, 798, 1411, 1903
BspMI	ACCTGC	3 cut(s)	248, 727, 1476
BspPI	GGATC	7 cut(s)	187, 305, 367, 538, 883, 895, 1871
BspTNI	GGTCTC	2 cut(s)	1576, 1643
BsrBI	CCGCTC	1 cut(s)	713
BsrDI	GCAATG	1 cut(s)	1598
BsrGI	TGTACA	1 cut(s)	520
BsrI	ACTGG	6 cut(s)	773, 792, 1030, 1112, 1279, 1999
BssECI	CCNNGG	4 cut(s)	71, 637, 923, 2091
BssNAI	GTATAC	1 cut(s)	2263
BssNI	GRCGYC	1 cut(s)	83
Bst1107I	GTATAC	1 cut(s)	2263
Bst2UI	CCWGG	9 cut(s)	18, 474, 564, 810, 900, 1245, 1473, 1682, 2092
Bst4CI	ACNGT	4 cut(s)	405, 1377, 2260, 2283
Bst6I	CTCTTC	2 cut(s)	163, 2229
BstACI	GRCGYC	1 cut(s)	83
BstAPI	GCANNNNNTGC	1 cut(s)	511
BstAUI	TGTACA	1 cut(s)	520
BstBAI	YACGTR	1 cut(s)	650
BstC8I	GCNNGC	3 cut(s)	255, 1359, 1667
BstDEI	CTNAG	9 cut(s)	624, 675, 744, 963, 1305, 1551, 1573, 1862, 2162
BstENI	CCTNNNNNAGG	1 cut(s)	474
BstF5I	GGATG	7 cut(s)	314, 613, 805, 1273, 1468, 1588, 1855
BstH2I	RGCGCY	1 cut(s)	422
BstHHI	GCGC	2 cut(s)	421, 2109
BstMAI	GTCTC	6 cut(s)	588, 684, 1576, 1643, 2047, 2231
BstMWI	GCNNNNNNNGC	7 cut(s)	511, 671, 719, 1306, 1724, 2096, 2189
BstNI	CCWGG	9 cut(s)	18, 474, 564, 810, 900, 1245, 1473, 1682, 2092
BstSFI	CTRYAG	7 cut(s)	255, 720, 794, 1147, 1407, 1899, 2193
BstV1I	GCAGC	8 cut(s)	49, 517, 727, 734, 791, 1117, 1885, 2233
BstV2I	GAAGAC	3 cut(s)	566, 858, 1533
BstX2I	RGATCY	5 cut(s)	359, 530, 875, 1876, 2071
BstYI	RGATCY	5 cut(s)	359, 530, 875, 1876, 2071
BstZ17I	GTATAC	1 cut(s)	2263
BsuI	GTATCC	1 cut(s)	2295
BsuRI	GGCC	8 cut(s)	169, 253, 286, 453, 928, 1439, 1476, 1803
BtgZI	GCGATG	1 cut(s)	2231
BtsCI	GGATG	7 cut(s)	314, 613, 805, 1273, 1468, 1588, 1855
BtsI	GCAGTG	1 cut(s)	1416
BtsIMutI	CAGTG	8 cut(s)	780, 785, 1119, 1272, 1373, 1416, 1951, 1956
BveI	ACCTGC	3 cut(s)	248, 727, 1476
Cac8I	GCNNGC	3 cut(s)	255, 1359, 1667
CaiI	CAGNNNCTG	2 cut(s)	104, 1196
CfoI	GCGC	2 cut(s)	421, 2109
Cfr9I	CCCGGG	1 cut(s)	637
CseI	GACGC	1 cut(s)	91
CsiI	ACCWGGT	1 cut(s)	562
Csp6I	GTAC	4 cut(s)	521, 1954, 1977, 2008
CviAII	CATG	7 cut(s)	79, 232, 1316, 1455, 2039, 2057, 2104
CviQI	GTAC	4 cut(s)	521, 1954, 1977, 2008
DdeI	CTNAG	9 cut(s)	624, 675, 744, 963, 1305, 1551, 1573, 1862, 2162
DraIII	CACNNNGTG	1 cut(s)	830
EaeI	YGGCCR	2 cut(s)	1474, 1801
Eam1104I	CTCTTC	2 cut(s)	163, 2229
EarI	CTCTTC	2 cut(s)	163, 2229
Eco147I	AGGCCT	2 cut(s)	286, 928
Eco24I	GRGCYC	1 cut(s)	1363
Eco31I	GGTCTC	2 cut(s)	1576, 1643
Eco47I	GGWCC	7 cut(s)	75, 101, 263, 818, 1294, 1712, 2166
Eco57I	CTGAAG	5 cut(s)	81, 181, 841, 1927, 2274
Eco72I	CACGTG	1 cut(s)	650
Eco88I	CYCGRG	1 cut(s)	637
EcoNI	CCTNNNNNAGG	1 cut(s)	474
EcoO109I	RGGNCCY	1 cut(s)	101
EcoRII	CCWGG	9 cut(s)	16, 472, 562, 808, 898, 1243, 1471, 1680, 2090
EcoT38I	GRGCYC	1 cut(s)	1363
FaeI	CATG	7 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107
FalI	AAGNNNNNCTT	2 cut(s)	1716, 1748
FaqI	GGGAC	2 cut(s)	19, 1580
FatI	CATG	7 cut(s)	78, 231, 1315, 1454, 2038, 2056, 2103
FauI	CCCGC	2 cut(s)	718, 1350
FauNDI	CATATG	2 cut(s)	1165, 1177
FblI	GTMKAC	2 cut(s)	22, 2262
FokI	GGATG	7 cut(s)	301, 600, 792, 1280, 1475, 1595, 1842
FriOI	GRGCYC	1 cut(s)	1363
FspAI	RTGCGCAY	1 cut(s)	2108
FspBI	CTAG	5 cut(s)	288, 300, 990, 1658, 2079
FspI	TGCGCA	1 cut(s)	2108
GlaI	GCGC	2 cut(s)	420, 2108
GsaI	CCCAGC	2 cut(s)	608, 1137
GsuI	CTGGAG	1 cut(s)	456
HaeII	RGCGCY	1 cut(s)	422
HaeIII	GGCC	8 cut(s)	169, 253, 286, 453, 928, 1439, 1476, 1803
HapII	CCGG	3 cut(s)	638, 816, 885
HgaI	GACGC	1 cut(s)	91
HhaI	GCGC	2 cut(s)	421, 2109
Hin1I	GRCGYC	1 cut(s)	83
Hin1II	CATG	7 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107
Hin6I	GCGC	2 cut(s)	419, 2107
HinP1I	GCGC	2 cut(s)	419, 2107
HincII	GTYRAC	3 cut(s)	23, 1621, 1748
HindII	GTYRAC	3 cut(s)	23, 1621, 1748
HinfI	GANTC	8 cut(s)	379, 571, 593, 1088, 1631, 1700, 1744, 2127
HpaII	CCGG	3 cut(s)	638, 816, 885
HphI	GGTGA	2 cut(s)	950, 1083
Hpy188I	TCNGA	8 cut(s)	75, 184, 200, 592, 627, 1161, 1576, 1630
Hpy188III	TCNNGA	4 cut(s)	376, 816, 1635, 1918
Hpy99I	CGWCG	1 cut(s)	1397
HpyAV	CCTTC	8 cut(s)	205, 420, 441, 525, 610, 1663, 1951, 2298
HpyCH4III	ACNGT	4 cut(s)	405, 1377, 2260, 2283
HpyCH4IV	ACGT	3 cut(s)	649, 1395, 1932
HpyF10VI	GCNNNNNNNGC	7 cut(s)	511, 671, 719, 1306, 1724, 2096, 2189
HpyF3I	CTNAG	9 cut(s)	624, 675, 744, 963, 1305, 1551, 1573, 1862, 2162
HpySE526I	ACGT	3 cut(s)	649, 1395, 1932
Hsp92I	GRCGYC	1 cut(s)	83
Hsp92II	CATG	7 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107
HspAI	GCGC	2 cut(s)	419, 2107
Kpn2I	TCCGGA	1 cut(s)	815
Lsp1109I	GCAGC	8 cut(s)	49, 517, 727, 734, 791, 1117, 1885, 2233
LweI	GCATC	7 cut(s)	131, 501, 734, 1060, 1183, 1258, 2208
MabI	ACCWGGT	1 cut(s)	562
MaeI	CTAG	5 cut(s)	288, 300, 990, 1658, 2079
MaeII	ACGT	3 cut(s)	649, 1395, 1932
MaeIII	GTNAC	3 cut(s)	755, 1180, 1946
MbiI	CCGCTC	1 cut(s)	713
MfeI	CAATTG	1 cut(s)	891
MflI	RGATCY	5 cut(s)	359, 530, 875, 1876, 2071
MhlI	GDGCHC	2 cut(s)	1228, 1363
MlsI	TGGCCA	1 cut(s)	1476
MluNI	TGGCCA	1 cut(s)	1476
MlyI	GAGTC	5 cut(s)	373, 580, 1709, 1753, 2136
MmeI	TCCRAC	5 cut(s)	91, 157, 853, 1139, 1364
Mox20I	TGGCCA	1 cut(s)	1476
MroI	TCCGGA	1 cut(s)	815
MscI	TGGCCA	1 cut(s)	1476
MseI	TTAA	8 cut(s)	306, 998, 1119, 1233, 1547, 1722, 2306, 2311
MslI	CAYNNNNRTG	1 cut(s)	1320
Msp20I	TGGCCA	1 cut(s)	1476
MspA1I	CMGCKG	1 cut(s)	2192
MspI	CCGG	3 cut(s)	638, 816, 885
MunI	CAATTG	1 cut(s)	891
MvaI	CCWGG	9 cut(s)	18, 474, 564, 810, 900, 1245, 1473, 1682, 2092
MwoI	GCNNNNNNNGC	7 cut(s)	511, 671, 719, 1306, 1724, 2096, 2189
NciI	CCSGG	3 cut(s)	638, 639, 885
NdeI	CATATG	2 cut(s)	1165, 1177
NlaIII	CATG	7 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107
NlaIV	GGNNCC	4 cut(s)	814, 820, 948, 1362
NmeAIII	GCCGAG	1 cut(s)	948
NmuCI	GTSAC	2 cut(s)	1180, 1946
NsbI	TGCGCA	1 cut(s)	2108
PaqCI	CACCTGC	2 cut(s)	248, 727
PceI	AGGCCT	2 cut(s)	286, 928
PfeI	GAWTC	3 cut(s)	593, 1088, 1631
PflMI	CCANNNNNTGG	2 cut(s)	830, 1793
PfoI	TCCNGGA	3 cut(s)	472, 883, 1680
PleI	GAGTC	5 cut(s)	373, 579, 1708, 1752, 2135
PmaCI	CACGTG	1 cut(s)	650
PmlI	CACGTG	1 cut(s)	650
PpsI	GAGTC	5 cut(s)	373, 579, 1708, 1752, 2135
Ppu21I	YACGTR	1 cut(s)	650
PpuMI	RGGWCCY	1 cut(s)	101
PsiI	TTATAA	1 cut(s)	1530
Psp5II	RGGWCCY	1 cut(s)	101
Psp6I	CCWGG	9 cut(s)	16, 472, 562, 808, 898, 1243, 1471, 1680, 2090
PspCI	CACGTG	1 cut(s)	650
PspFI	CCCAGC	2 cut(s)	604, 1133
PspGI	CCWGG	9 cut(s)	16, 472, 562, 808, 898, 1243, 1471, 1680, 2090
PspN4I	GGNNCC	4 cut(s)	814, 820, 948, 1362
PspPPI	RGGWCCY	1 cut(s)	101
PstI	CTGCAG	5 cut(s)	259, 724, 798, 1411, 1903
PstNI	CAGNNNCTG	2 cut(s)	104, 1196
PsuI	RGATCY	5 cut(s)	359, 530, 875, 1876, 2071
PvuII	CAGCTG	1 cut(s)	2192
RsaI	GTAC	4 cut(s)	522, 1955, 1978, 2009
RsaNI	GTAC	4 cut(s)	521, 1954, 1977, 2008
RseI	CAYNNNNRTG	1 cut(s)	1320
SalI	GTCGAC	1 cut(s)	21
SaqAI	TTAA	8 cut(s)	306, 998, 1119, 1233, 1547, 1722, 2306, 2311
SbfI	CCTGCAGG	1 cut(s)	259
SchI	GAGTC	5 cut(s)	373, 580, 1709, 1753, 2136
SdaI	CCTGCAGG	1 cut(s)	259
SduI	GDGCHC	2 cut(s)	1228, 1363
SexAI	ACCWGGT	1 cut(s)	562
SfaNI	GCATC	7 cut(s)	131, 501, 734, 1060, 1183, 1258, 2208
SfcI	CTRYAG	7 cut(s)	255, 720, 794, 1147, 1407, 1899, 2193
SinI	GGWCC	7 cut(s)	75, 101, 263, 818, 1294, 1712, 2166
SmaI	CCCGGG	1 cut(s)	639
SmiMI	CAYNNNNRTG	1 cut(s)	1320
Sse8387I	CCTGCAGG	1 cut(s)	259
SseBI	AGGCCT	2 cut(s)	286, 928
SsiI	CCGC	5 cut(s)	711, 1357, 1370, 1804, 2131
SspMI	CTAG	5 cut(s)	288, 300, 990, 1658, 2079
StuI	AGGCCT	2 cut(s)	286, 928
TaaI	ACNGT	4 cut(s)	405, 1377, 2260, 2283
TaiI	ACGT	3 cut(s)	652, 1398, 1935
TaqI	TCGA	3 cut(s)	22, 413, 1392
TaqII	GACCGA	1 cut(s)	1440
TatI	WGTACW	3 cut(s)	520, 1953, 2007
TauI	GCSGC	2 cut(s)	1372, 1806
TfiI	GAWTC	3 cut(s)	593, 1088, 1631
Tru1I	TTAA	8 cut(s)	306, 998, 1119, 1233, 1547, 1722, 2306, 2311
Tru9I	TTAA	8 cut(s)	306, 998, 1119, 1233, 1547, 1722, 2306, 2311
TscAI	CASTG	8 cut(s)	780, 792, 1119, 1279, 1380, 1416, 1951, 1963
TseFI	GTSAC	2 cut(s)	1180, 1946
TseI	GCWGC	8 cut(s)	62, 505, 722, 740, 779, 1130, 1898, 2221
Tsp45I	GTSAC	2 cut(s)	1180, 1946
TspDTI	ATGAA	4 cut(s)	566, 1392, 1550, 2027
TspGWI	ACGGA	3 cut(s)	307, 774, 1307
TspMI	CCCGGG	1 cut(s)	637
TspRI	CASTG	8 cut(s)	780, 792, 1119, 1279, 1380, 1416, 1951, 1963
Van91I	CCANNNNNTGG	2 cut(s)	830, 1793
VpaK11BI	GGWCC	7 cut(s)	75, 101, 263, 818, 1294, 1712, 2166
XagI	CCTNNNNNAGG	1 cut(s)	474
XapI	RAATTY	6 cut(s)	28, 550, 1328, 1904, 2020, 2299
XmaI	CCCGGG	1 cut(s)	637
XmiI	GTMKAC	2 cut(s)	22, 2262
XspI	CTAG	5 cut(s)	288, 300, 990, 1658, 2079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.