Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0014550

Physical Location & Seq

Genomic Coordinates Forward (+)

29849785 .. 29851524

Gene Structure 1740 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1221500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGAAGAAACACCAGAAAATCATTCTCTCACTCTTGGAAAAATGCAGAAGCATGAGTGAATTGAAACAAATACATGGGCTGATGATCACCGCCTCAGTTGTTAACAATGTAATCCAGTTAAGTAGGCTTGTTGATTTTTGTACCAATTCCGAGGCCAGAGACCTCGGTTACGCGAAGAAAGTTTTCCGGCAGATCAGTCAGCCTAGTGTCTACATCTGGAACTCAATGATCAGAGGCTACTCCAATAGTGGGAACCCGGTTGCGTCCTTGATTATGTACAGAGAAATGCTGCAAAGGGGTTACTTGCCCGACAATTTTACTTTCCCGTTCGTGCTTAAATCGTGTTCTGTGATCGCTGATTACCATTATGGAAAATGTGTTCATAACTGCATTGTGAAAACTGGGTATGGGTTGGAGGTCTATGGCTCTACTTGTTTGCTTAGAATGTATTCTTCTTGTGCAGATATGGAATCTGCACTCAAGGTGTTTGATATTATTCCCAAGTGGAATGTAGTTGCTTGGACTAGTTTGATTTCCGGGCTTGTTAATAACAGTCGGGCTATCGAGGCTATAAAGGTGTTCAAGAGTATGGAACTTCACAATGTACAGCCTAATGAGATCACCATGGTGCATGTTGTAGTCGCTTGTGCTCGAAGTAGGGATATTGGTACAGGAAAGTTGGTTCACAGTCGTATTCGCCAACAAGGGTTTGATCCTTTCGGTTCAAGTTTTAACTTTAATGTAGTTCTTGCAACTGCCTTATTAGATATGTATGCAAAATGTGGCAGCTTGAGAACTGCAAGGGATCTGTTCAACAAAATGGCTCAAAAAAACTTGGTTACCTGGAATTCCATGATTAGTGCTTATAATCAGTATGGCCGGGCTGAGGACGCAATCGATCTCTTTTCTGATATGCGGATTGCTGGTTTTGTTCCGGACCAAACCACCTTTCTAGGGGTAATAGGTGCTTGTGGGCAGTTGGGGGCTTTGGCATTCGGACGAAATCTTCATTCATATGTATCGAAAACTAGCATGGGCAAAGATACTACAATCGGGACTGCCTTAGTTGACATGTATGCTAAAATTGGAGATGCAGGAAGTGCTCGAAGAATTTTCGAGAACTTGCAGAAGAAAGATGTGATGGCATGGACTAGCATGATTATCTGTTTAGCTACGCATGGACACGGTATGGAAGCGCTACATACATTTAGAAAAATGCAAGAGGATGCTAGTGTTATTCCAGACCAGATCACTTACATTGGGGTTTTATCGGCATGTAGCCATATCGGTCTTGTAGAGGAGGGTCAGAGACATTTTGCCTCAATGGTAAATCTTTACGGCATAAAGCCGACTGCGGATCATTATTGCTGCATGGTTGATCTTCTGAGTCGAGCAGGCCACTTTGATGAGGCGATGAGACTGCTGGAAGAGATGCCGATCCAACCCAATGTTGCTGTCTGGGGAGCTCTCTTGAACGGCTGCGAGATACATGAAAATGTTGATCTAGCTGACCAAGTGAGAAGATACATAATAGAGATGGAACCTCATGGCAGTGGAGTTTATGTTCTGCTGTCCAATATATACGCTAGGGCTGGTCGATGGCAGGAGGTAAATCGGGTTAGAGAACTGATGAAAAACAGGAATATTGCCAAAAATCTCGGGCATAGTTCGGTCGAAATGGAGTTGTTAAGTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

566

Amino Acids

63.19

Weight (kDa)

8.6

Isoelectric Point (pI)

37.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	68 - 115	4.2e-09	PPR repeat family
PPR_2	PF13041	170 - 210	2.6e-08	PPR repeat family
PPR_2	PF13041	278 - 324	1.6e-10	PPR repeat family
PPR	PF01535	280 - 309	1.7e-07	PPR repeat
PPR_1	PF12854	447 - 478	8.1e-06	PPR repeat
E_motif	PF20431	497 - 559	1.8e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05240
fragaria_vesca	FvH4_6g05570
malus_domestica	MD12G1221500.v1.1
prunus_persica	Prupe.6G328300_v2.0.a1
pyrus_communis	pycom12g20770
rosa_chinensis	RchiOBHm_Chr3g0454351
rosa_laevigata	RLG00000025451 RLG00000025452 RLG00000025458
rosa_multiflora	Rmu_sc0000006.1_g000021 Rmu_sc0007209.1_g000013
rosa_roxburghii	Rroxscaffold_165G00437180 Rroxscaffold_6G00425180
rosa_rugosa	Rorug02G0654500
rosa_samantha	Rh3BG060200 Rh3DG060600
rosa_wichuraiana	Rw3G004500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	867
AccI	GTMKAC	1 cut(s)	210
AccII	CGCG	1 cut(s)	173
AccIII	TCCGGA	1 cut(s)	934
AciI	CCGC	3 cut(s)	90, 916, 1355
AclWI	GGATC	4 cut(s)	707, 813, 1365, 1432
AcoI	YGGCCR	1 cut(s)	877
AcsI	RAATTY	2 cut(s)	847, 1110
AfaI	GTAC	4 cut(s)	142, 278, 606, 670
AfeI	AGCGCT	1 cut(s)	1197
AfiI	CCNNNNNNNGG	3 cut(s)	249, 886, 954
AflIII	ACRYGT	1 cut(s)	1071
AgsI	TTSAA	5 cut(s)	64, 583, 726, 814, 1474
AhlI	ACTAGT	1 cut(s)	524
AjnI	CCWGG	1 cut(s)	842
AjuI	GAANNNNNNNTTGG	2 cut(s)	933, 965
AleI	CACNNNNGTG	1 cut(s)	626
AloI	GAACNNNNNNTCC	6 cut(s)	363, 395, 666, 698, 1548, 1580
AluBI	AGCT	4 cut(s)	789, 1172, 1466, 1508
AluI	AGCT	4 cut(s)	789, 1172, 1466, 1508
Alw21I	GWGCWC	3 cut(s)	652, 1105, 1468
Alw26I	GTCTC	3 cut(s)	153, 1303, 1411
AlwI	GGATC	4 cut(s)	707, 813, 1365, 1432
Ama87I	CYCGRG	1 cut(s)	1658
Aor13HI	TCCGGA	1 cut(s)	934
Aor51HI	AGCGCT	1 cut(s)	1197
AoxI	GGCC	3 cut(s)	153, 877, 1396
ApeKI	GCWGC	4 cut(s)	289, 786, 1368, 1479
ApoI	RAATTY	2 cut(s)	847, 1110
Asp700I	GAANNNNTTC	2 cut(s)	182, 448
AspLEI	GCGC	1 cut(s)	1198
AspS9I	GGNCC	1 cut(s)	937
AsuC2I	CCSGG	3 cut(s)	257, 538, 881
AsuHPI	GGTGA	2 cut(s)	79, 613
AvaI	CYCGRG	1 cut(s)	1658
AvaII	GGWCC	1 cut(s)	937
BanII	GRGCYC	1 cut(s)	1468
Bbv12I	GWGCWC	3 cut(s)	652, 1105, 1468
BbvCI	CCTCAGC	1 cut(s)	885
BbvI	GCAGC	4 cut(s)	276, 798, 1355, 1466
BccI	CCATC	3 cut(s)	1135, 1531, 1593
BceAI	ACGGC	2 cut(s)	1354, 1492
BcgI	CGANNNNNNTGC	2 cut(s)	1402, 1436
BciT130I	CCWGG	1 cut(s)	844
BclI	TGATCA	2 cut(s)	84, 228
BcnI	CCSGG	3 cut(s)	257, 538, 881
BcoDI	GTCTC	3 cut(s)	153, 1303, 1411
BcuI	ACTAGT	1 cut(s)	524
BfaI	CTAG	8 cut(s)	204, 525, 953, 1029, 1152, 1230, 1505, 1587
BfoI	RGCGCY	1 cut(s)	1199
BisI	GCNGC	4 cut(s)	290, 787, 1369, 1480
BlsI	GCNGC	4 cut(s)	291, 788, 1370, 1481
Bme1390I	CCNGG	4 cut(s)	257, 538, 844, 881
Bme18I	GGWCC	1 cut(s)	937
BmeT110I	CYCGRG	1 cut(s)	1658
BmgT120I	GGNCC	1 cut(s)	937
BmiI	GGNNCC	2 cut(s)	254, 1542
BmrFI	CCNGG	4 cut(s)	257, 538, 844, 881
BmrI	ACTGGG	1 cut(s)	411
BmsI	GCATC	3 cut(s)	1081, 1216, 1422
BmuI	ACTGGG	1 cut(s)	411
Bpu10I	CCTNAGC	1 cut(s)	885
BpuEI	CTTGAG	2 cut(s)	464, 811
BpuMI	CCSGG	3 cut(s)	257, 538, 881
Bsa29I	ATCGAT	1 cut(s)	897
BsaBI	GATNNNNATC	1 cut(s)	1436
BsaI	GGTCTC	1 cut(s)	153
BsaJI	CCNNGG	3 cut(s)	150, 163, 624
BsaWI	WCCGGW	1 cut(s)	934
BsaXI	ACNNNNNCTCC	2 cut(s)	1548, 1578
Bsc4I	CCNNNNNNNGG	3 cut(s)	249, 886, 954
Bse1I	ACTGG	2 cut(s)	115, 406
Bse8I	GATNNNNATC	1 cut(s)	1436
BseAI	TCCGGA	1 cut(s)	934
BseBI	CCWGG	1 cut(s)	844
BseCI	ATCGAT	1 cut(s)	897
BseDI	CCNNGG	3 cut(s)	150, 163, 624
BseGI	GGATG	1 cut(s)	1231
BseJI	GATNNNNATC	1 cut(s)	1436
BseLI	CCNNNNNNNGG	3 cut(s)	249, 886, 954
BseMII	CTCAG	3 cut(s)	108, 876, 1376
BseNI	ACTGG	2 cut(s)	115, 406
BseRI	GAGGAG	1 cut(s)	1313
BseXI	GCAGC	4 cut(s)	276, 798, 1355, 1466
BsgI	GTGCAG	2 cut(s)	459, 480
Bsh1236I	CGCG	1 cut(s)	173
Bsh1285I	CGRYCG	1 cut(s)	1674
BshFI	GGCC	3 cut(s)	155, 879, 1398
BshVI	ATCGAT	1 cut(s)	897
BsiEI	CGRYCG	1 cut(s)	1674
BsiHKAI	GWGCWC	3 cut(s)	652, 1105, 1468
BsiHKCI	CYCGRG	1 cut(s)	1658
BsiSI	CCGG	5 cut(s)	187, 257, 537, 880, 935
BslFI	GGGAC	1 cut(s)	1069
BslI	CCNNNNNNNGG	3 cut(s)	249, 886, 954
BsmAI	GTCTC	3 cut(s)	153, 1303, 1411
BsmFI	GGGAC	1 cut(s)	1069
BsmI	GAATGC	1 cut(s)	992
BsnI	GGCC	3 cut(s)	155, 879, 1398
Bso31I	GGTCTC	1 cut(s)	153
BsoBI	CYCGRG	1 cut(s)	1658
Bsp1286I	GDGCHC	3 cut(s)	652, 1105, 1468
Bsp13I	TCCGGA	1 cut(s)	934
Bsp1407I	TGTACA	2 cut(s)	276, 604
Bsp19I	CCATGG	1 cut(s)	624
BspACI	CCGC	3 cut(s)	90, 916, 1355
BspANI	GGCC	3 cut(s)	155, 879, 1398
BspCNI	CTCAG	3 cut(s)	107, 877, 1377
BspDI	ATCGAT	1 cut(s)	897
BspEI	TCCGGA	1 cut(s)	934
BspFNI	CGCG	1 cut(s)	173
BspLI	GGNNCC	2 cut(s)	254, 1542
BspPI	GGATC	4 cut(s)	707, 813, 1365, 1432
BspTNI	GGTCTC	1 cut(s)	153
BsrGI	TGTACA	2 cut(s)	276, 604
BsrI	ACTGG	2 cut(s)	115, 406
BssECI	CCNNGG	3 cut(s)	150, 163, 624
BssT1I	CCWWGG	1 cut(s)	624
Bst2UI	CCWGG	1 cut(s)	844
Bst4CI	ACNGT	3 cut(s)	554, 689, 1187
Bst6I	CTCTTC	1 cut(s)	1422
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstAUI	TGTACA	2 cut(s)	276, 604
BstC8I	GCNNGC	1 cut(s)	1396
BstDEI	CTNAG	5 cut(s)	94, 440, 885, 1063, 1385
BstDSI	CCRYGG	1 cut(s)	624
BstEII	GGTNACC	1 cut(s)	838
BstF5I	GGATG	1 cut(s)	1231
BstFNI	CGCG	1 cut(s)	173
BstH2I	RGCGCY	1 cut(s)	1199
BstHHI	GCGC	1 cut(s)	1198
BstMAI	GTCTC	3 cut(s)	153, 1303, 1411
BstMCI	CGRYCG	1 cut(s)	1674
BstMWI	GCNNNNNNNGC	3 cut(s)	566, 890, 1100
BstNI	CCWGG	1 cut(s)	844
BstNSI	RCATGY	3 cut(s)	635, 1075, 1278
BstPI	GGTNACC	1 cut(s)	838
BstSCI	CCNGG	4 cut(s)	255, 536, 842, 879
BstUI	CGCG	1 cut(s)	173
BstV1I	GCAGC	4 cut(s)	276, 798, 1355, 1466
BstX2I	RGATCY	1 cut(s)	805
BstYI	RGATCY	1 cut(s)	805
Bsu15I	ATCGAT	1 cut(s)	897
BsuRI	GGCC	3 cut(s)	155, 879, 1398
BsuTUI	ATCGAT	1 cut(s)	897
BtgI	CCRYGG	1 cut(s)	624
BtgZI	GCGATG	1 cut(s)	1427
BtsCI	GGATG	1 cut(s)	1231
BtsI	GCAGTG	1 cut(s)	1558
BtsIMutI	CAGTG	1 cut(s)	1558
Cac8I	GCNNGC	1 cut(s)	1396
CfoI	GCGC	1 cut(s)	1198
Cfr13I	GGNCC	1 cut(s)	937
ClaI	ATCGAT	1 cut(s)	897
CseI	GACGC	2 cut(s)	252, 899
Csp6I	GTAC	4 cut(s)	141, 277, 605, 669
CviQI	GTAC	4 cut(s)	141, 277, 605, 669
DdeI	CTNAG	5 cut(s)	94, 440, 885, 1063, 1385
EaeI	YGGCCR	1 cut(s)	877
Eam1104I	CTCTTC	1 cut(s)	1422
EarI	CTCTTC	1 cut(s)	1422
Ecl136II	GAGCTC	1 cut(s)	1466
Eco130I	CCWWGG	1 cut(s)	624
Eco24I	GRGCYC	1 cut(s)	1468
Eco31I	GGTCTC	1 cut(s)	153
Eco47I	GGWCC	1 cut(s)	937
Eco47III	AGCGCT	1 cut(s)	1197
Eco53kI	GAGCTC	1 cut(s)	1466
Eco88I	CYCGRG	1 cut(s)	1658
Eco91I	GGTNACC	1 cut(s)	838
EcoICRI	GAGCTC	1 cut(s)	1466
EcoO65I	GGTNACC	1 cut(s)	838
EcoRI	GAATTC	1 cut(s)	847
EcoRII	CCWGG	1 cut(s)	842
EcoT14I	CCWWGG	1 cut(s)	624
EcoT38I	GRGCYC	1 cut(s)	1468
ErhI	CCWWGG	1 cut(s)	624
FaqI	GGGAC	1 cut(s)	1069
FauNDI	CATATG	1 cut(s)	1015
FbaI	TGATCA	2 cut(s)	84, 228
FblI	GTMKAC	1 cut(s)	210
Fnu4HI	GCNGC	4 cut(s)	290, 787, 1369, 1480
FokI	GGATG	1 cut(s)	1238
FriOI	GRGCYC	1 cut(s)	1468
Fsp4HI	GCNGC	4 cut(s)	290, 787, 1369, 1480
FspBI	CTAG	8 cut(s)	204, 525, 953, 1029, 1152, 1230, 1505, 1587
GlaI	GCGC	1 cut(s)	1197
GluI	GCNGC	4 cut(s)	290, 787, 1369, 1480
HaeII	RGCGCY	1 cut(s)	1199
HaeIII	GGCC	3 cut(s)	155, 879, 1398
HapII	CCGG	5 cut(s)	187, 257, 537, 880, 935
HgaI	GACGC	2 cut(s)	252, 899
HhaI	GCGC	1 cut(s)	1198
Hin6I	GCGC	1 cut(s)	1196
HinP1I	GCGC	1 cut(s)	1196
HincII	GTYRAC	2 cut(s)	103, 1069
HindII	GTYRAC	2 cut(s)	103, 1069
HinfI	GANTC	2 cut(s)	470, 1387
HpaI	GTTAAC	1 cut(s)	103
HpaII	CCGG	5 cut(s)	187, 257, 537, 880, 935
HphI	GGTGA	2 cut(s)	79, 613
Hpy166II	GTNNAC	4 cut(s)	103, 211, 685, 1069
Hpy188I	TCNGA	6 cut(s)	151, 233, 910, 998, 1308, 1386
Hpy188III	TCNNGA	7 cut(s)	217, 583, 935, 1054, 1117, 1241, 1471
Hpy8I	GTNNAC	4 cut(s)	103, 211, 685, 1069
HpyCH4III	ACNGT	3 cut(s)	554, 689, 1187
HpyF10VI	GCNNNNNNNGC	3 cut(s)	566, 890, 1100
HpyF3I	CTNAG	5 cut(s)	94, 440, 885, 1063, 1385
HspAI	GCGC	1 cut(s)	1196
Kpn2I	TCCGGA	1 cut(s)	934
Ksp22I	TGATCA	2 cut(s)	84, 228
KspAI	GTTAAC	1 cut(s)	103
LmnI	GCTCC	1 cut(s)	1463
Lsp1109I	GCAGC	4 cut(s)	276, 798, 1355, 1466
LweI	GCATC	3 cut(s)	1081, 1216, 1422
MaeI	CTAG	8 cut(s)	204, 525, 953, 1029, 1152, 1230, 1505, 1587
MaeIII	GTNAC	3 cut(s)	167, 299, 838
MboII	GAAGA	9 cut(s)	16, 187, 444, 998, 1119, 1141, 1373, 1439, 1533
MflI	RGATCY	1 cut(s)	805
MhlI	GDGCHC	3 cut(s)	652, 1105, 1468
MluCI	AATT	6 cut(s)	59, 145, 313, 847, 1083, 1110
MlyI	GAGTC	1 cut(s)	1396
MmeI	TCCRAC	2 cut(s)	393, 1465
MroI	TCCGGA	1 cut(s)	934
MroXI	GAANNNNTTC	2 cut(s)	182, 448
MseI	TTAA	7 cut(s)	102, 119, 336, 546, 732, 738, 1688
MslI	CAYNNNNRTG	5 cut(s)	626, 1014, 1404, 1494, 1551
MspI	CCGG	5 cut(s)	187, 257, 537, 880, 935
MspR9I	CCNGG	4 cut(s)	257, 538, 844, 881
Mva1269I	GAATGC	1 cut(s)	992
MvaI	CCWGG	1 cut(s)	844
MvnI	CGCG	1 cut(s)	173
MwoI	GCNNNNNNNGC	3 cut(s)	566, 890, 1100
NciI	CCSGG	3 cut(s)	257, 538, 881
NcoI	CCATGG	1 cut(s)	624
NdeI	CATATG	1 cut(s)	1015
NlaIV	GGNNCC	2 cut(s)	254, 1542
NspI	RCATGY	3 cut(s)	635, 1075, 1278
OliI	CACNNNNGTG	1 cut(s)	626
PciI	ACATGT	1 cut(s)	1071
PctI	GAATGC	1 cut(s)	992
PdmI	GAANNNNTTC	2 cut(s)	182, 448
PfeI	GAWTC	1 cut(s)	470
PkrI	GCNGC	4 cut(s)	291, 788, 1370, 1481
PleI	GAGTC	1 cut(s)	1395
PpsI	GAGTC	1 cut(s)	1395
PscI	ACATGT	1 cut(s)	1071
PsiI	TTATAA	1 cut(s)	867
Psp124BI	GAGCTC	1 cut(s)	1468
Psp6I	CCWGG	1 cut(s)	842
PspEI	GGTNACC	1 cut(s)	838
PspGI	CCWGG	1 cut(s)	842
PspN4I	GGNNCC	2 cut(s)	254, 1542
PspPI	GGNCC	1 cut(s)	937
PsuI	RGATCY	1 cut(s)	805
RsaI	GTAC	4 cut(s)	142, 278, 606, 670
RsaNI	GTAC	4 cut(s)	141, 277, 605, 669
RseI	CAYNNNNRTG	5 cut(s)	626, 1014, 1404, 1494, 1551
SacI	GAGCTC	1 cut(s)	1468
SaqAI	TTAA	7 cut(s)	102, 119, 336, 546, 732, 738, 1688
SatI	GCNGC	4 cut(s)	290, 787, 1369, 1480
Sau96I	GGNCC	1 cut(s)	937
SchI	GAGTC	1 cut(s)	1396
ScrFI	CCNGG	4 cut(s)	257, 538, 844, 881
SduI	GDGCHC	3 cut(s)	652, 1105, 1468
SfaNI	GCATC	3 cut(s)	1081, 1216, 1422
SinI	GGWCC	1 cut(s)	937
SmiMI	CAYNNNNRTG	5 cut(s)	626, 1014, 1404, 1494, 1551
SmlI	CTYRAG	2 cut(s)	479, 790
SmoI	CTYRAG	2 cut(s)	479, 790
SpeI	ACTAGT	1 cut(s)	524
Sse9I	AATT	6 cut(s)	59, 145, 313, 847, 1083, 1110
SsiI	CCGC	3 cut(s)	90, 916, 1355
SspI	AATATT	1 cut(s)	1645
SspMI	CTAG	8 cut(s)	204, 525, 953, 1029, 1152, 1230, 1505, 1587
SstI	GAGCTC	1 cut(s)	1468
StyD4I	CCNGG	4 cut(s)	255, 536, 842, 879
StyI	CCWWGG	1 cut(s)	624
TaaI	ACNGT	3 cut(s)	554, 689, 1187
TaqI	TCGA	9 cut(s)	564, 652, 897, 1022, 1105, 1116, 1390, 1597, 1674
TaqII	GACCGA	2 cut(s)	1277, 1660
TasI	AATT	6 cut(s)	59, 145, 313, 847, 1083, 1110
TatI	WGTACW	2 cut(s)	276, 604
TfiI	GAWTC	1 cut(s)	470
Tru1I	TTAA	7 cut(s)	102, 119, 336, 546, 732, 738, 1688
Tru9I	TTAA	7 cut(s)	102, 119, 336, 546, 732, 738, 1688
TscAI	CASTG	1 cut(s)	1558
TseI	GCWGC	4 cut(s)	289, 786, 1368, 1479
TspDTI	ATGAA	6 cut(s)	17, 371, 998, 1002, 1506, 1646
TspRI	CASTG	1 cut(s)	1558
VpaK11BI	GGWCC	1 cut(s)	937
XapI	RAATTY	2 cut(s)	847, 1110
XceI	RCATGY	3 cut(s)	635, 1075, 1278
XmiI	GTMKAC	1 cut(s)	210
XmnI	GAANNNNTTC	2 cut(s)	182, 448
XspI	CTAG	8 cut(s)	204, 525, 953, 1029, 1152, 1230, 1505, 1587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.