Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05240 |
| fragaria_vesca | FvH4_6g05570 |
| malus_domestica | MD12G1221500.v1.1 |
| prunus_persica | Prupe.6G328300_v2.0.a1 |
| pyrus_communis | pycom12g20770 |
| rosa_chinensis | RchiOBHm_Chr3g0454351 |
| rosa_laevigata | RLG00000025451 RLG00000025452 RLG00000025458 |
| rosa_multiflora | Rmu_sc0000006.1_g000021 Rmu_sc0007209.1_g000013 |
| rosa_roxburghii | Rroxscaffold_165G00437180 Rroxscaffold_6G00425180 |
| rosa_rugosa | Rorug02G0654500 |
| rosa_samantha | Rh3BG060200 Rh3DG060600 |
| rosa_wichuraiana | Rw3G004500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 120 |
| AfaI | GTAC | 1 cut(s) | 398 |
| AgsI | TTSAA | 2 cut(s) | 13, 364 |
| AluBI | AGCT | 3 cut(s) | 104, 117, 504 |
| AluI | AGCT | 3 cut(s) | 104, 117, 504 |
| Alw21I | GWGCWC | 2 cut(s) | 191, 285 |
| Alw26I | GTCTC | 1 cut(s) | 102 |
| AsuHPI | GGTGA | 1 cut(s) | 28 |
| Bbv12I | GWGCWC | 2 cut(s) | 191, 285 |
| BccI | CCATC | 1 cut(s) | 73 |
| BclI | TGATCA | 2 cut(s) | 33, 177 |
| BcoDI | GTCTC | 1 cut(s) | 102 |
| BfaI | CTAG | 2 cut(s) | 153, 505 |
| BmrI | ACTGGG | 2 cut(s) | 200, 360 |
| BmuI | ACTGGG | 2 cut(s) | 200, 360 |
| BpmI | CTGGAG | 1 cut(s) | 126 |
| BsaBI | GATNNNNATC | 1 cut(s) | 32 |
| Bse1I | ACTGG | 2 cut(s) | 206, 355 |
| Bse8I | GATNNNNATC | 1 cut(s) | 32 |
| BseGI | GGATG | 1 cut(s) | 33 |
| BseJI | GATNNNNATC | 1 cut(s) | 32 |
| BseMII | CTCAG | 1 cut(s) | 57 |
| BseNI | ACTGG | 2 cut(s) | 206, 355 |
| BsgI | GTGCAG | 2 cut(s) | 408, 429 |
| BsiHKAI | GWGCWC | 2 cut(s) | 191, 285 |
| BsmAI | GTCTC | 1 cut(s) | 102 |
| Bsp1286I | GDGCHC | 2 cut(s) | 191, 285 |
| Bsp143I | GATC | 2 cut(s) | 33, 177 |
| BspCNI | CTCAG | 1 cut(s) | 56 |
| BsrI | ACTGG | 2 cut(s) | 206, 355 |
| BssMI | GATC | 2 cut(s) | 33, 177 |
| Bst4CI | ACNGT | 1 cut(s) | 401 |
| Bst6I | CTCTTC | 1 cut(s) | 382 |
| BstDEI | CTNAG | 1 cut(s) | 43 |
| BstF5I | GGATG | 1 cut(s) | 33 |
| BstKTI | GATC | 2 cut(s) | 36, 180 |
| BstMAI | GTCTC | 1 cut(s) | 102 |
| BstMBI | GATC | 2 cut(s) | 33, 177 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 195 |
| BtsCI | GGATG | 1 cut(s) | 33 |
| BtsIMutI | CAGTG | 1 cut(s) | 310 |
| Csp6I | GTAC | 1 cut(s) | 397 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 28, 63 |
| CviAII | CATG | 1 cut(s) | 23 |
| CviJI | RGCY | 4 cut(s) | 76, 104, 117, 504 |
| CviKI_1 | RGCY | 4 cut(s) | 76, 104, 117, 504 |
| CviQI | GTAC | 1 cut(s) | 397 |
| DdeI | CTNAG | 1 cut(s) | 43 |
| DpnI | GATC | 2 cut(s) | 35, 179 |
| DpnII | GATC | 2 cut(s) | 33, 177 |
| Eam1104I | CTCTTC | 1 cut(s) | 382 |
| EarI | CTCTTC | 1 cut(s) | 382 |
| Eco57I | CTGAAG | 1 cut(s) | 120 |
| FaeI | CATG | 1 cut(s) | 26 |
| FatI | CATG | 1 cut(s) | 22 |
| FbaI | TGATCA | 2 cut(s) | 33, 177 |
| FokI | GGATG | 1 cut(s) | 40 |
| FspBI | CTAG | 2 cut(s) | 153, 505 |
| GsuI | CTGGAG | 1 cut(s) | 126 |
| Hin1II | CATG | 1 cut(s) | 26 |
| HinfI | GANTC | 2 cut(s) | 212, 419 |
| HphI | GGTGA | 1 cut(s) | 28 |
| Hpy166II | GTNNAC | 1 cut(s) | 386 |
| Hpy188I | TCNGA | 2 cut(s) | 100, 182 |
| Hpy188III | TCNNGA | 1 cut(s) | 166 |
| Hpy8I | GTNNAC | 1 cut(s) | 386 |
| HpyAV | CCTTC | 1 cut(s) | 424 |
| HpyCH4III | ACNGT | 1 cut(s) | 401 |
| HpyCH4V | TGCA | 4 cut(s) | 241, 339, 410, 425 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 195 |
| HpyF3I | CTNAG | 1 cut(s) | 43 |
| Hsp92II | CATG | 1 cut(s) | 26 |
| Ksp22I | TGATCA | 2 cut(s) | 33, 177 |
| Kzo9I | GATC | 2 cut(s) | 33, 177 |
| LpnPI | CCDG | 7 cut(s) | 90, 151, 219, 270, 336, 366, 466 |
| MaeI | CTAG | 2 cut(s) | 153, 505 |
| MalI | GATC | 2 cut(s) | 35, 179 |
| MboI | GATC | 2 cut(s) | 33, 177 |
| MboII | GAAGA | 1 cut(s) | 369 |
| MhlI | GDGCHC | 2 cut(s) | 191, 285 |
| MluCI | AATT | 3 cut(s) | 8, 94, 141 |
| MlyI | GAGTC | 1 cut(s) | 221 |
| MnlI | CCTC | 3 cut(s) | 52, 176, 385 |
| MseI | TTAA | 1 cut(s) | 144 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 195 |
| NdeII | GATC | 2 cut(s) | 33, 177 |
| NlaIII | CATG | 1 cut(s) | 26 |
| PfeI | GAWTC | 1 cut(s) | 419 |
| PleI | GAGTC | 1 cut(s) | 220 |
| PpsI | GAGTC | 1 cut(s) | 220 |
| RsaI | GTAC | 1 cut(s) | 398 |
| RsaNI | GTAC | 1 cut(s) | 397 |
| SaqAI | TTAA | 1 cut(s) | 144 |
| Sau3AI | GATC | 2 cut(s) | 33, 177 |
| SchI | GAGTC | 1 cut(s) | 221 |
| SduI | GDGCHC | 2 cut(s) | 191, 285 |
| SetI | ASST | 6 cut(s) | 44, 106, 119, 154, 435, 506 |
| Sse9I | AATT | 3 cut(s) | 8, 94, 141 |
| SspMI | CTAG | 2 cut(s) | 153, 505 |
| TaaI | ACNGT | 1 cut(s) | 401 |
| TaqI | TCGA | 3 cut(s) | 68, 191, 296 |
| TasI | AATT | 3 cut(s) | 8, 94, 141 |
| TfiI | GAWTC | 1 cut(s) | 419 |
| Tru1I | TTAA | 1 cut(s) | 144 |
| Tru9I | TTAA | 1 cut(s) | 144 |
| TscAI | CASTG | 1 cut(s) | 310 |
| TspDTI | ATGAA | 2 cut(s) | 302, 320 |
| TspRI | CASTG | 1 cut(s) | 310 |
| XspI | CTAG | 2 cut(s) | 153, 505 |