Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05240 |
| fragaria_vesca | FvH4_6g05570 |
| malus_domestica | MD12G1221500.v1.1 |
| prunus_persica | Prupe.6G328300_v2.0.a1 |
| pyrus_communis | pycom12g20770 |
| rosa_chinensis | RchiOBHm_Chr3g0454351 |
| rosa_laevigata | RLG00000025451 RLG00000025452 RLG00000025458 |
| rosa_multiflora | Rmu_sc0000006.1_g000021 Rmu_sc0007209.1_g000013 |
| rosa_roxburghii | Rroxscaffold_165G00437180 Rroxscaffold_6G00425180 |
| rosa_rugosa | Rorug02G0654500 |
| rosa_samantha | Rh3BG060200 Rh3DG060600 |
| rosa_wichuraiana | Rw3G004500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 867 |
| Acc16I | TGCGCA | 1 cut(s) | 975 |
| AccIII | TCCGGA | 1 cut(s) | 934 |
| AciI | CCGC | 2 cut(s) | 1399, 1412 |
| AclWI | GGATC | 2 cut(s) | 106, 707 |
| AcoI | YGGCCR | 1 cut(s) | 877 |
| AcsI | RAATTY | 4 cut(s) | 145, 469, 847, 1110 |
| AcuI | CTGAAG | 1 cut(s) | 1374 |
| AfaI | GTAC | 1 cut(s) | 606 |
| AfeI | AGCGCT | 1 cut(s) | 1197 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 886, 1599 |
| AflIII | ACRYGT | 2 cut(s) | 417, 1071 |
| AgsI | TTSAA | 9 cut(s) | 64, 599, 733, 739, 814, 1406, 1442, 1474, 1575 |
| AhlI | ACTAGT | 1 cut(s) | 524 |
| AjnI | CCWGG | 1 cut(s) | 842 |
| AleI | CACNNNNGTG | 1 cut(s) | 626 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 363, 395, 666, 698, 1548, 1580 |
| AluBI | AGCT | 8 cut(s) | 260, 789, 944, 1049, 1172, 1466, 1615, 1619 |
| AluI | AGCT | 8 cut(s) | 260, 789, 944, 1049, 1172, 1466, 1615, 1619 |
| Alw21I | GWGCWC | 3 cut(s) | 652, 1105, 1468 |
| Alw26I | GTCTC | 4 cut(s) | 153, 905, 1303, 1411 |
| AlwI | GGATC | 2 cut(s) | 106, 707 |
| Aor13HI | TCCGGA | 1 cut(s) | 934 |
| Aor51HI | AGCGCT | 1 cut(s) | 1197 |
| AoxI | GGCC | 5 cut(s) | 153, 475, 877, 1396, 1590 |
| ApeKI | GCWGC | 4 cut(s) | 289, 786, 1368, 1479 |
| ApoI | RAATTY | 4 cut(s) | 145, 469, 847, 1110 |
| AseI | ATTAAT | 1 cut(s) | 195 |
| AspA2I | CCTAGG | 1 cut(s) | 203 |
| AspLEI | GCGC | 2 cut(s) | 976, 1198 |
| AspS9I | GGNCC | 1 cut(s) | 1590 |
| AsuC2I | CCSGG | 1 cut(s) | 881 |
| AsuHPI | GGTGA | 3 cut(s) | 179, 613, 1426 |
| AsuNHI | GCTAGC | 1 cut(s) | 1615 |
| AvrII | CCTAGG | 1 cut(s) | 203 |
| BaeGI | GKGCMC | 1 cut(s) | 1185 |
| BanII | GRGCYC | 1 cut(s) | 1468 |
| BarI | GAAGNNNNNNTAC | 3 cut(s) | 28, 436, 468 |
| BauI | CACGAG | 1 cut(s) | 801 |
| BbsI | GAAGAC | 2 cut(s) | 998, 1528 |
| Bbv12I | GWGCWC | 3 cut(s) | 652, 1105, 1468 |
| BbvCI | CCTCAGC | 1 cut(s) | 885 |
| BbvI | GCAGC | 4 cut(s) | 276, 798, 1355, 1466 |
| BccI | CCATC | 2 cut(s) | 1135, 1593 |
| BciT130I | CCWGG | 1 cut(s) | 844 |
| BclI | TGATCA | 2 cut(s) | 84, 228 |
| BcnI | CCSGG | 1 cut(s) | 881 |
| BcoDI | GTCTC | 4 cut(s) | 153, 905, 1303, 1411 |
| BcuI | ACTAGT | 1 cut(s) | 524 |
| BfaI | CTAG | 7 cut(s) | 204, 525, 1029, 1152, 1230, 1616, 1620 |
| BfmI | CTRYAG | 1 cut(s) | 1124 |
| BfoI | RGCGCY | 1 cut(s) | 1199 |
| BglII | AGATCT | 1 cut(s) | 805 |
| BisI | GCNGC | 5 cut(s) | 290, 787, 1369, 1399, 1480 |
| BlnI | CCTAGG | 1 cut(s) | 203 |
| BlsI | GCNGC | 5 cut(s) | 291, 788, 1370, 1400, 1481 |
| Bme1390I | CCNGG | 2 cut(s) | 844, 881 |
| BmgT120I | GGNCC | 1 cut(s) | 1590 |
| BmiI | GGNNCC | 1 cut(s) | 1542 |
| BmrFI | CCNGG | 2 cut(s) | 844, 881 |
| BmrI | ACTGGG | 1 cut(s) | 411 |
| BmsI | GCATC | 2 cut(s) | 1081, 1216 |
| BmtI | GCTAGC | 1 cut(s) | 1619 |
| BmuI | ACTGGG | 1 cut(s) | 411 |
| BpiI | GAAGAC | 2 cut(s) | 998, 1528 |
| BpmI | CTGGAG | 1 cut(s) | 1107 |
| Bpu10I | CCTNAGC | 1 cut(s) | 885 |
| BpuEI | CTTGAG | 2 cut(s) | 811, 1405 |
| BpuMI | CCSGG | 1 cut(s) | 881 |
| BsaAI | YACGTR | 1 cut(s) | 304 |
| BsaI | GGTCTC | 2 cut(s) | 153, 905 |
| BsaJI | CCNNGG | 2 cut(s) | 203, 624 |
| BsaWI | WCCGGW | 1 cut(s) | 934 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1548, 1578 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 886, 1599 |
| Bse118I | RCCGGY | 1 cut(s) | 1592 |
| Bse1I | ACTGG | 5 cut(s) | 406, 676, 1090, 1168, 1428 |
| BseAI | TCCGGA | 1 cut(s) | 934 |
| BseBI | CCWGG | 1 cut(s) | 844 |
| BseDI | CCNNGG | 2 cut(s) | 203, 624 |
| BseGI | GGATG | 2 cut(s) | 943, 1231 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 886, 1599 |
| BseMII | CTCAG | 6 cut(s) | 108, 141, 252, 555, 839, 876 |
| BseNI | ACTGG | 5 cut(s) | 406, 676, 1090, 1168, 1428 |
| BseRI | GAGGAG | 2 cut(s) | 1313, 1654 |
| BseSI | GKGCMC | 1 cut(s) | 1185 |
| BseXI | GCAGC | 4 cut(s) | 276, 798, 1355, 1466 |
| BseYI | CCCAGC | 2 cut(s) | 256, 923 |
| BsgI | GTGCAG | 2 cut(s) | 480, 783 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1597 |
| BshFI | GGCC | 5 cut(s) | 155, 477, 879, 1398, 1592 |
| BsiEI | CGRYCG | 1 cut(s) | 1597 |
| BsiHKAI | GWGCWC | 3 cut(s) | 652, 1105, 1468 |
| BsiSI | CCGG | 4 cut(s) | 308, 880, 935, 1593 |
| BslFI | GGGAC | 1 cut(s) | 1011 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 886, 1599 |
| BsmAI | GTCTC | 4 cut(s) | 153, 905, 1303, 1411 |
| BsmFI | GGGAC | 1 cut(s) | 1011 |
| BsmI | GAATGC | 1 cut(s) | 925 |
| BsnI | GGCC | 5 cut(s) | 155, 477, 879, 1398, 1592 |
| Bso31I | GGTCTC | 2 cut(s) | 153, 905 |
| Bsp1286I | GDGCHC | 4 cut(s) | 652, 1105, 1185, 1468 |
| Bsp13I | TCCGGA | 1 cut(s) | 934 |
| Bsp1407I | TGTACA | 1 cut(s) | 604 |
| Bsp143I | GATC | 8 cut(s) | 84, 111, 228, 712, 805, 1248, 1378, 1501 |
| Bsp19I | CCATGG | 1 cut(s) | 624 |
| BspACI | CCGC | 2 cut(s) | 1399, 1412 |
| BspANI | GGCC | 5 cut(s) | 155, 477, 879, 1398, 1592 |
| BspCNI | CTCAG | 6 cut(s) | 107, 142, 253, 556, 838, 877 |
| BspEI | TCCGGA | 1 cut(s) | 934 |
| BspHI | TCATGA | 1 cut(s) | 1694 |
| BspLI | GGNNCC | 1 cut(s) | 1542 |
| BspMAI | CTGCAG | 1 cut(s) | 1128 |
| BspOI | GCTAGC | 1 cut(s) | 1619 |
| BspPI | GGATC | 2 cut(s) | 106, 707 |
| BspQI | GCTCTTC | 1 cut(s) | 1350 |
| BspTNI | GGTCTC | 2 cut(s) | 153, 905 |
| BsrFI | RCCGGY | 1 cut(s) | 1592 |
| BsrGI | TGTACA | 1 cut(s) | 604 |
| BsrI | ACTGG | 5 cut(s) | 406, 676, 1090, 1168, 1428 |
| BssAI | RCCGGY | 1 cut(s) | 1592 |
| BssECI | CCNNGG | 2 cut(s) | 203, 624 |
| BssMI | GATC | 8 cut(s) | 84, 111, 228, 712, 805, 1248, 1378, 1501 |
| BssSI | CACGAG | 1 cut(s) | 801 |
| BssT1I | CCWWGG | 2 cut(s) | 203, 624 |
| Bst2BI | CACGAG | 1 cut(s) | 801 |
| Bst2UI | CCWGG | 1 cut(s) | 844 |
| Bst4CI | ACNGT | 4 cut(s) | 33, 358, 689, 1187 |
| Bst6I | CTCTTC | 2 cut(s) | 1350, 1401 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1100 |
| BstAUI | TGTACA | 1 cut(s) | 604 |
| BstBAI | YACGTR | 1 cut(s) | 304 |
| BstC8I | GCNNGC | 2 cut(s) | 1396, 1617 |
| BstDSI | CCRYGG | 1 cut(s) | 624 |
| BstEII | GGTNACC | 1 cut(s) | 838 |
| BstF5I | GGATG | 2 cut(s) | 943, 1231 |
| BstH2I | RGCGCY | 1 cut(s) | 1199 |
| BstHHI | GCGC | 2 cut(s) | 976, 1198 |
| BstKTI | GATC | 8 cut(s) | 87, 114, 231, 715, 808, 1251, 1381, 1504 |
| BstMAI | GTCTC | 4 cut(s) | 153, 905, 1303, 1411 |
| BstMBI | GATC | 8 cut(s) | 84, 111, 228, 712, 805, 1248, 1378, 1501 |
| BstMCI | CGRYCG | 1 cut(s) | 1597 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 458, 566, 890, 929, 1100, 1202 |
| BstNI | CCWGG | 1 cut(s) | 844 |
| BstNSI | RCATGY | 6 cut(s) | 45, 421, 635, 1075, 1205, 1278 |
| BstPI | GGTNACC | 1 cut(s) | 838 |
| BstSCI | CCNGG | 2 cut(s) | 842, 879 |
| BstSFI | CTRYAG | 1 cut(s) | 1124 |
| BstSLI | GKGCMC | 1 cut(s) | 1185 |
| BstV1I | GCAGC | 4 cut(s) | 276, 798, 1355, 1466 |
| BstV2I | GAAGAC | 2 cut(s) | 998, 1528 |
| BstX2I | RGATCY | 1 cut(s) | 805 |
| BstYI | RGATCY | 1 cut(s) | 805 |
| BsuRI | GGCC | 5 cut(s) | 155, 477, 879, 1398, 1592 |
| BtgI | CCRYGG | 1 cut(s) | 624 |
| BtsCI | GGATG | 2 cut(s) | 943, 1231 |
| BtsI | GCAGTG | 1 cut(s) | 1056 |
| BtsIMutI | CAGTG | 3 cut(s) | 29, 354, 1056 |
| Cac8I | GCNNGC | 2 cut(s) | 1396, 1617 |
| CciI | TCATGA | 1 cut(s) | 1694 |
| CfoI | GCGC | 2 cut(s) | 976, 1198 |
| Cfr10I | RCCGGY | 1 cut(s) | 1592 |
| Cfr13I | GGNCC | 1 cut(s) | 1590 |
| CseI | GACGC | 1 cut(s) | 1533 |
| Csp6I | GTAC | 1 cut(s) | 605 |
| CviQI | GTAC | 1 cut(s) | 605 |
| DpnI | GATC | 8 cut(s) | 86, 113, 230, 714, 807, 1250, 1380, 1503 |
| DpnII | GATC | 8 cut(s) | 84, 111, 228, 712, 805, 1248, 1378, 1501 |
| EaeI | YGGCCR | 1 cut(s) | 877 |
| Eam1104I | CTCTTC | 2 cut(s) | 1350, 1401 |
| EarI | CTCTTC | 2 cut(s) | 1350, 1401 |
| Ecl136II | GAGCTC | 1 cut(s) | 1466 |
| Eco130I | CCWWGG | 2 cut(s) | 203, 624 |
| Eco147I | AGGCCT | 1 cut(s) | 477 |
| Eco24I | GRGCYC | 1 cut(s) | 1468 |
| Eco31I | GGTCTC | 2 cut(s) | 153, 905 |
| Eco47III | AGCGCT | 1 cut(s) | 1197 |
| Eco53kI | GAGCTC | 1 cut(s) | 1466 |
| Eco57I | CTGAAG | 1 cut(s) | 1374 |
| Eco91I | GGTNACC | 1 cut(s) | 838 |
| EcoICRI | GAGCTC | 1 cut(s) | 1466 |
| EcoO65I | GGTNACC | 1 cut(s) | 838 |
| EcoRI | GAATTC | 2 cut(s) | 469, 847 |
| EcoRII | CCWGG | 1 cut(s) | 842 |
| EcoT14I | CCWWGG | 2 cut(s) | 203, 624 |
| EcoT38I | GRGCYC | 1 cut(s) | 1468 |
| ErhI | CCWWGG | 2 cut(s) | 203, 624 |
| FaqI | GGGAC | 1 cut(s) | 1011 |
| FauNDI | CATATG | 1 cut(s) | 1015 |
| FbaI | TGATCA | 2 cut(s) | 84, 228 |
| Fnu4HI | GCNGC | 5 cut(s) | 290, 787, 1369, 1399, 1480 |
| FokI | GGATG | 2 cut(s) | 950, 1238 |
| FriOI | GRGCYC | 1 cut(s) | 1468 |
| Fsp4HI | GCNGC | 5 cut(s) | 290, 787, 1369, 1399, 1480 |
| FspBI | CTAG | 7 cut(s) | 204, 525, 1029, 1152, 1230, 1616, 1620 |
| FspI | TGCGCA | 1 cut(s) | 975 |
| GlaI | GCGC | 2 cut(s) | 975, 1197 |
| GluI | GCNGC | 5 cut(s) | 290, 787, 1369, 1399, 1480 |
| GsaI | CCCAGC | 2 cut(s) | 260, 927 |
| GsuI | CTGGAG | 1 cut(s) | 1107 |
| HaeII | RGCGCY | 1 cut(s) | 1199 |
| HaeIII | GGCC | 5 cut(s) | 155, 477, 879, 1398, 1592 |
| HapII | CCGG | 4 cut(s) | 308, 880, 935, 1593 |
| HgaI | GACGC | 1 cut(s) | 1533 |
| HhaI | GCGC | 2 cut(s) | 976, 1198 |
| Hin6I | GCGC | 2 cut(s) | 974, 1196 |
| HinP1I | GCGC | 2 cut(s) | 974, 1196 |
| HinfI | GANTC | 2 cut(s) | 263, 1387 |
| HpaII | CCGG | 4 cut(s) | 308, 880, 935, 1593 |
| HphI | GGTGA | 3 cut(s) | 179, 613, 1426 |
| Hpy166II | GTNNAC | 4 cut(s) | 361, 621, 685, 1069 |
| Hpy188I | TCNGA | 6 cut(s) | 151, 233, 828, 910, 1211, 1308 |
| Hpy188III | TCNNGA | 6 cut(s) | 217, 935, 1241, 1384, 1471, 1695 |
| Hpy8I | GTNNAC | 4 cut(s) | 361, 621, 685, 1069 |
| HpyCH4III | ACNGT | 4 cut(s) | 33, 358, 689, 1187 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 458, 566, 890, 929, 1100, 1202 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| HspAI | GCGC | 2 cut(s) | 974, 1196 |
| Kpn2I | TCCGGA | 1 cut(s) | 934 |
| Ksp22I | TGATCA | 2 cut(s) | 84, 228 |
| Kzo9I | GATC | 8 cut(s) | 84, 111, 228, 712, 805, 1248, 1378, 1501 |
| LguI | GCTCTTC | 1 cut(s) | 1350 |
| LmnI | GCTCC | 2 cut(s) | 937, 1463 |
| Lsp1109I | GCAGC | 4 cut(s) | 276, 798, 1355, 1466 |
| LweI | GCATC | 2 cut(s) | 1081, 1216 |
| MaeI | CTAG | 7 cut(s) | 204, 525, 1029, 1152, 1230, 1616, 1620 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 2 cut(s) | 299, 838 |
| MalI | GATC | 8 cut(s) | 86, 113, 230, 714, 807, 1250, 1380, 1503 |
| MboI | GATC | 8 cut(s) | 84, 111, 228, 712, 805, 1248, 1378, 1501 |
| MboII | GAAGA | 9 cut(s) | 16, 384, 998, 1141, 1367, 1418, 1439, 1533, 1559 |
| MfeI | CAATTG | 1 cut(s) | 894 |
| MflI | RGATCY | 1 cut(s) | 805 |
| MhlI | GDGCHC | 4 cut(s) | 652, 1105, 1185, 1468 |
| MlyI | GAGTC | 2 cut(s) | 272, 1396 |
| MmeI | TCCRAC | 2 cut(s) | 15, 393 |
| MroI | TCCGGA | 1 cut(s) | 934 |
| MseI | TTAA | 5 cut(s) | 102, 119, 195, 336, 582 |
| MslI | CAYNNNNRTG | 4 cut(s) | 626, 1014, 1494, 1551 |
| MspA1I | CMGCKG | 1 cut(s) | 260 |
| MspI | CCGG | 4 cut(s) | 308, 880, 935, 1593 |
| MspR9I | CCNGG | 2 cut(s) | 844, 881 |
| MunI | CAATTG | 1 cut(s) | 894 |
| Mva1269I | GAATGC | 1 cut(s) | 925 |
| MvaI | CCWGG | 1 cut(s) | 844 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 458, 566, 890, 929, 1100, 1202 |
| NciI | CCSGG | 1 cut(s) | 881 |
| NcoI | CCATGG | 1 cut(s) | 624 |
| NdeI | CATATG | 1 cut(s) | 1015 |
| NdeII | GATC | 8 cut(s) | 84, 111, 228, 712, 805, 1248, 1378, 1501 |
| NheI | GCTAGC | 1 cut(s) | 1615 |
| NlaIV | GGNNCC | 1 cut(s) | 1542 |
| NsbI | TGCGCA | 1 cut(s) | 975 |
| NspI | RCATGY | 6 cut(s) | 45, 421, 635, 1075, 1205, 1278 |
| OliI | CACNNNNGTG | 1 cut(s) | 626 |
| PagI | TCATGA | 1 cut(s) | 1694 |
| PceI | AGGCCT | 1 cut(s) | 477 |
| PciI | ACATGT | 2 cut(s) | 417, 1071 |
| PciSI | GCTCTTC | 1 cut(s) | 1350 |
| PctI | GAATGC | 1 cut(s) | 925 |
| PflFI | GACNNNGTC | 1 cut(s) | 1002 |
| PkrI | GCNGC | 5 cut(s) | 291, 788, 1370, 1400, 1481 |
| PleI | GAGTC | 2 cut(s) | 271, 1395 |
| PpsI | GAGTC | 2 cut(s) | 271, 1395 |
| Ppu21I | YACGTR | 1 cut(s) | 304 |
| PscI | ACATGT | 2 cut(s) | 417, 1071 |
| PshBI | ATTAAT | 1 cut(s) | 195 |
| PsiI | TTATAA | 1 cut(s) | 867 |
| Psp124BI | GAGCTC | 1 cut(s) | 1468 |
| Psp6I | CCWGG | 1 cut(s) | 842 |
| PspEI | GGTNACC | 1 cut(s) | 838 |
| PspFI | CCCAGC | 2 cut(s) | 256, 923 |
| PspGI | CCWGG | 1 cut(s) | 842 |
| PspN4I | GGNNCC | 1 cut(s) | 1542 |
| PspPI | GGNCC | 1 cut(s) | 1590 |
| PstI | CTGCAG | 1 cut(s) | 1128 |
| PsuI | RGATCY | 1 cut(s) | 805 |
| PsyI | GACNNNGTC | 1 cut(s) | 1002 |
| PvuII | CAGCTG | 1 cut(s) | 260 |
| RsaI | GTAC | 1 cut(s) | 606 |
| RsaNI | GTAC | 1 cut(s) | 605 |
| RseI | CAYNNNNRTG | 4 cut(s) | 626, 1014, 1494, 1551 |
| SacI | GAGCTC | 1 cut(s) | 1468 |
| SapI | GCTCTTC | 1 cut(s) | 1350 |
| SaqAI | TTAA | 5 cut(s) | 102, 119, 195, 336, 582 |
| SatI | GCNGC | 5 cut(s) | 290, 787, 1369, 1399, 1480 |
| Sau3AI | GATC | 8 cut(s) | 84, 111, 228, 712, 805, 1248, 1378, 1501 |
| Sau96I | GGNCC | 1 cut(s) | 1590 |
| SchI | GAGTC | 2 cut(s) | 272, 1396 |
| ScrFI | CCNGG | 2 cut(s) | 844, 881 |
| SduI | GDGCHC | 4 cut(s) | 652, 1105, 1185, 1468 |
| SfaNI | GCATC | 2 cut(s) | 1081, 1216 |
| SfcI | CTRYAG | 1 cut(s) | 1124 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 626, 1014, 1494, 1551 |
| SmlI | CTYRAG | 2 cut(s) | 790, 1384 |
| SmoI | CTYRAG | 2 cut(s) | 790, 1384 |
| SpeI | ACTAGT | 1 cut(s) | 524 |
| SseBI | AGGCCT | 1 cut(s) | 477 |
| SsiI | CCGC | 2 cut(s) | 1399, 1412 |
| SspI | AATATT | 2 cut(s) | 496, 1333 |
| SspMI | CTAG | 7 cut(s) | 204, 525, 1029, 1152, 1230, 1616, 1620 |
| SstI | GAGCTC | 1 cut(s) | 1468 |
| StuI | AGGCCT | 1 cut(s) | 477 |
| StyD4I | CCNGG | 2 cut(s) | 842, 879 |
| StyI | CCWWGG | 2 cut(s) | 203, 624 |
| TaaI | ACNGT | 4 cut(s) | 33, 358, 689, 1187 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TaqI | TCGA | 4 cut(s) | 652, 1390, 1597, 1674 |
| TatI | WGTACW | 1 cut(s) | 604 |
| TauI | GCSGC | 1 cut(s) | 1401 |
| Tru1I | TTAA | 5 cut(s) | 102, 119, 195, 336, 582 |
| Tru9I | TTAA | 5 cut(s) | 102, 119, 195, 336, 582 |
| TscAI | CASTG | 3 cut(s) | 36, 361, 1063 |
| TseI | GCWGC | 4 cut(s) | 289, 786, 1368, 1479 |
| TspRI | CASTG | 3 cut(s) | 36, 361, 1063 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1002 |
| VspI | ATTAAT | 1 cut(s) | 195 |
| XapI | RAATTY | 4 cut(s) | 145, 469, 847, 1110 |
| XceI | RCATGY | 6 cut(s) | 45, 421, 635, 1075, 1205, 1278 |
| XmaJI | CCTAGG | 1 cut(s) | 203 |
| XspI | CTAG | 7 cut(s) | 204, 525, 1029, 1152, 1230, 1616, 1620 |