isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23890 AT1G23890 |
| fragaria_vesca | FvH4_4g34820 FvH4_4g34820 FvH4_4g34820 |
| malus_domestica | MD13G1089400.v1.1 MD16G1089600.v1.1 |
| prunus_persica | Prupe.1G256400_v2.0.a1 |
| pyrus_communis | pycom13g07780 pycom13g07790 pycom16g07670 |
| rosa_chinensis | RchiOBHm_Chr4g0444161 |
| rosa_laevigata | RLG00000005851 |
| rosa_multiflora | Rmu_sc0012638.1_g000013 Rmu_sc0030210.1_g000001 Rmu_sc0031890.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00384750 |
| rosa_rugosa | Rorug04G0350600 |
| rosa_samantha | Rh4AG411200 Rh4AG411300 Rh4BG422600 Rh4BG422700 Rh4CG437000 Rh4DG417900 Rh4DG418000 |
| rosa_wichuraiana | Rw4G035330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 732 |
| AccII | CGCG | 4 cut(s) | 152, 453, 524, 543 |
| AciI | CCGC | 8 cut(s) | 75, 152, 543, 685, 718, 730, 917, 1200 |
| AclI | AACGTT | 1 cut(s) | 479 |
| AclWI | GGATC | 5 cut(s) | 178, 234, 247, 550, 1017 |
| AcoI | YGGCCR | 1 cut(s) | 124 |
| AcuI | CTGAAG | 1 cut(s) | 390 |
| AfaI | GTAC | 3 cut(s) | 101, 434, 777 |
| AfeI | AGCGCT | 2 cut(s) | 403, 746 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 151, 236, 543, 706, 707 |
| AflII | CTTAAG | 1 cut(s) | 1016 |
| AgsI | TTSAA | 1 cut(s) | 319 |
| AjiI | CACGTC | 1 cut(s) | 82 |
| AjnI | CCWGG | 5 cut(s) | 166, 445, 590, 908, 1044 |
| AleI | CACNNNNGTG | 1 cut(s) | 113 |
| AluBI | AGCT | 7 cut(s) | 333, 499, 816, 847, 1015, 1107, 1166 |
| AluI | AGCT | 7 cut(s) | 333, 499, 816, 847, 1015, 1107, 1166 |
| Alw21I | GWGCWC | 2 cut(s) | 159, 419 |
| Alw26I | GTCTC | 4 cut(s) | 538, 644, 730, 1065 |
| AlwI | GGATC | 5 cut(s) | 178, 234, 247, 550, 1017 |
| Ama87I | CYCGRG | 1 cut(s) | 66 |
| Aor51HI | AGCGCT | 2 cut(s) | 403, 746 |
| AoxI | GGCC | 6 cut(s) | 124, 309, 460, 686, 820, 1042 |
| ApeKI | GCWGC | 6 cut(s) | 509, 526, 711, 747, 844, 1056 |
| AseI | ATTAAT | 1 cut(s) | 567 |
| AspLEI | GCGC | 9 cut(s) | 12, 209, 404, 453, 524, 526, 590, 747, 806 |
| AspS9I | GGNCC | 3 cut(s) | 310, 461, 821 |
| AsuC2I | CCSGG | 3 cut(s) | 237, 313, 328 |
| AsuHPI | GGTGA | 4 cut(s) | 127, 451, 477, 1091 |
| AsuNHI | GCTAGC | 1 cut(s) | 812 |
| AvaI | CYCGRG | 1 cut(s) | 66 |
| BamHI | GGATCC | 1 cut(s) | 239 |
| BbsI | GAAGAC | 3 cut(s) | 34, 99, 352 |
| Bbv12I | GWGCWC | 2 cut(s) | 159, 419 |
| BbvCI | CCTCAGC | 1 cut(s) | 50 |
| BbvI | GCAGC | 6 cut(s) | 496, 513, 698, 734, 856, 1068 |
| BccI | CCATC | 4 cut(s) | 287, 1031, 1076, 1181 |
| BceAI | ACGGC | 8 cut(s) | 11, 139, 203, 292, 323, 475, 779, 835 |
| BciT130I | CCWGG | 5 cut(s) | 168, 447, 592, 910, 1046 |
| BciVI | GTATCC | 1 cut(s) | 82 |
| BcnI | CCSGG | 3 cut(s) | 237, 313, 328 |
| BcoDI | GTCTC | 4 cut(s) | 538, 644, 730, 1065 |
| BfaI | CTAG | 2 cut(s) | 813, 1104 |
| BfoI | RGCGCY | 3 cut(s) | 210, 405, 748 |
| BfrI | CTTAAG | 1 cut(s) | 1016 |
| BfuI | GTATCC | 1 cut(s) | 82 |
| BisI | GCNGC | 8 cut(s) | 510, 527, 686, 712, 719, 748, 845, 1057 |
| BlsI | GCNGC | 8 cut(s) | 511, 528, 687, 713, 720, 749, 846, 1058 |
| Bme1390I | CCNGG | 8 cut(s) | 168, 237, 313, 328, 447, 592, 910, 1046 |
| BmeT110I | CYCGRG | 1 cut(s) | 66 |
| BmgBI | CACGTC | 1 cut(s) | 82 |
| BmgT120I | GGNCC | 3 cut(s) | 310, 461, 821 |
| BmiI | GGNNCC | 1 cut(s) | 241 |
| BmrFI | CCNGG | 8 cut(s) | 168, 237, 313, 328, 447, 592, 910, 1046 |
| BmsI | GCATC | 2 cut(s) | 672, 870 |
| BmtI | GCTAGC | 1 cut(s) | 816 |
| BpiI | GAAGAC | 3 cut(s) | 34, 99, 352 |
| Bpu10I | CCTNAGC | 1 cut(s) | 50 |
| BpuEI | CTTGAG | 1 cut(s) | 557 |
| BpuMI | CCSGG | 3 cut(s) | 237, 313, 328 |
| BsaAI | YACGTR | 1 cut(s) | 898 |
| BsaI | GGTCTC | 1 cut(s) | 644 |
| BsaJI | CCNNGG | 5 cut(s) | 166, 326, 446, 921, 1111 |
| BsaWI | WCCGGW | 4 cut(s) | 200, 269, 487, 558 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 151, 236, 543, 706, 707 |
| Bse1I | ACTGG | 1 cut(s) | 16 |
| BseBI | CCWGG | 5 cut(s) | 168, 447, 592, 910, 1046 |
| BseDI | CCNNGG | 5 cut(s) | 166, 326, 446, 921, 1111 |
| BseGI | GGATG | 2 cut(s) | 298, 1192 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 151, 236, 543, 706, 707 |
| BseMII | CTCAG | 1 cut(s) | 64 |
| BseNI | ACTGG | 1 cut(s) | 16 |
| BsePI | GCGCGC | 1 cut(s) | 522 |
| BseRI | GAGGAG | 2 cut(s) | 38, 173 |
| BseXI | GCAGC | 6 cut(s) | 496, 513, 698, 734, 856, 1068 |
| BsgI | GTGCAG | 1 cut(s) | 1075 |
| Bsh1236I | CGCG | 4 cut(s) | 152, 453, 524, 543 |
| Bsh1285I | CGRYCG | 1 cut(s) | 541 |
| BshFI | GGCC | 6 cut(s) | 126, 311, 462, 688, 822, 1044 |
| BsiEI | CGRYCG | 1 cut(s) | 541 |
| BsiHKAI | GWGCWC | 2 cut(s) | 159, 419 |
| BsiHKCI | CYCGRG | 1 cut(s) | 66 |
| BsiSI | CCGG | 9 cut(s) | 201, 237, 270, 313, 328, 426, 488, 559, 578 |
| BslFI | GGGAC | 1 cut(s) | 1099 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 151, 236, 543, 706, 707 |
| BsmAI | GTCTC | 4 cut(s) | 538, 644, 730, 1065 |
| BsmBI | CGTCTC | 2 cut(s) | 730, 1065 |
| BsmFI | GGGAC | 1 cut(s) | 1099 |
| BsnI | GGCC | 6 cut(s) | 126, 311, 462, 688, 822, 1044 |
| Bso31I | GGTCTC | 1 cut(s) | 644 |
| BsoBI | CYCGRG | 1 cut(s) | 66 |
| Bsp1286I | GDGCHC | 2 cut(s) | 159, 419 |
| Bsp143I | GATC | 8 cut(s) | 117, 170, 178, 239, 514, 538, 555, 1009 |
| Bsp19I | CCATGG | 1 cut(s) | 1111 |
| BspACI | CCGC | 8 cut(s) | 75, 152, 543, 685, 718, 730, 917, 1200 |
| BspANI | GGCC | 6 cut(s) | 126, 311, 462, 688, 822, 1044 |
| BspCNI | CTCAG | 1 cut(s) | 63 |
| BspFNI | CGCG | 4 cut(s) | 152, 453, 524, 543 |
| BspLI | GGNNCC | 1 cut(s) | 241 |
| BspOI | GCTAGC | 1 cut(s) | 816 |
| BspPI | GGATC | 5 cut(s) | 178, 234, 247, 550, 1017 |
| BspTI | CTTAAG | 1 cut(s) | 1016 |
| BspTNI | GGTCTC | 1 cut(s) | 644 |
| BsrBI | CCGCTC | 1 cut(s) | 732 |
| BsrI | ACTGG | 1 cut(s) | 16 |
| BssECI | CCNNGG | 5 cut(s) | 166, 326, 446, 921, 1111 |
| BssHII | GCGCGC | 1 cut(s) | 522 |
| BssMI | GATC | 8 cut(s) | 117, 170, 178, 239, 514, 538, 555, 1009 |
| BssT1I | CCWWGG | 2 cut(s) | 921, 1111 |
| Bst2UI | CCWGG | 5 cut(s) | 168, 447, 592, 910, 1046 |
| Bst4CI | ACNGT | 7 cut(s) | 106, 115, 264, 962, 1053, 1076, 1139 |
| Bst6I | CTCTTC | 2 cut(s) | 41, 202 |
| BstAFI | CTTAAG | 1 cut(s) | 1016 |
| BstBAI | YACGTR | 1 cut(s) | 898 |
| BstC8I | GCNNGC | 5 cut(s) | 159, 501, 524, 716, 814 |
| BstDEI | CTNAG | 1 cut(s) | 50 |
| BstDSI | CCRYGG | 1 cut(s) | 1111 |
| BstF5I | GGATG | 2 cut(s) | 298, 1192 |
| BstFNI | CGCG | 4 cut(s) | 152, 453, 524, 543 |
| BstH2I | RGCGCY | 3 cut(s) | 210, 405, 748 |
| BstHHI | GCGC | 9 cut(s) | 12, 209, 404, 453, 524, 526, 590, 747, 806 |
| BstKTI | GATC | 8 cut(s) | 120, 173, 181, 242, 517, 541, 558, 1012 |
| BstMAI | GTCTC | 4 cut(s) | 538, 644, 730, 1065 |
| BstMBI | GATC | 8 cut(s) | 117, 170, 178, 239, 514, 538, 555, 1009 |
| BstMCI | CGRYCG | 1 cut(s) | 541 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 158, 215, 459, 473, 509 |
| BstNI | CCWGG | 5 cut(s) | 168, 447, 592, 910, 1046 |
| BstSCI | CCNGG | 8 cut(s) | 166, 235, 311, 326, 445, 590, 908, 1044 |
| BstSNI | TACGTA | 1 cut(s) | 898 |
| BstUI | CGCG | 4 cut(s) | 152, 453, 524, 543 |
| BstV1I | GCAGC | 6 cut(s) | 496, 513, 698, 734, 856, 1068 |
| BstV2I | GAAGAC | 3 cut(s) | 34, 99, 352 |
| BstX2I | RGATCY | 1 cut(s) | 239 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1006 |
| BstYI | RGATCY | 1 cut(s) | 239 |
| BsuI | GTATCC | 1 cut(s) | 82 |
| BsuRI | GGCC | 6 cut(s) | 126, 311, 462, 688, 822, 1044 |
| BtgI | CCRYGG | 1 cut(s) | 1111 |
| BtgZI | GCGATG | 1 cut(s) | 1107 |
| BtrI | CACGTC | 1 cut(s) | 82 |
| BtsCI | GGATG | 2 cut(s) | 298, 1192 |
| BtsIMutI | CAGTG | 1 cut(s) | 524 |
| Cac8I | GCNNGC | 5 cut(s) | 159, 501, 524, 716, 814 |
| CfoI | GCGC | 9 cut(s) | 12, 209, 404, 453, 524, 526, 590, 747, 806 |
| Cfr13I | GGNCC | 3 cut(s) | 310, 461, 821 |
| CseI | GACGC | 1 cut(s) | 43 |
| Csp6I | GTAC | 3 cut(s) | 100, 433, 776 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1164, 1199 |
| CviAII | CATG | 3 cut(s) | 738, 1060, 1112 |
| CviQI | GTAC | 3 cut(s) | 100, 433, 776 |
| DdeI | CTNAG | 1 cut(s) | 50 |
| DpnI | GATC | 8 cut(s) | 119, 172, 180, 241, 516, 540, 557, 1011 |
| DpnII | GATC | 8 cut(s) | 117, 170, 178, 239, 514, 538, 555, 1009 |
| EaeI | YGGCCR | 1 cut(s) | 124 |
| Eam1104I | CTCTTC | 2 cut(s) | 41, 202 |
| EarI | CTCTTC | 2 cut(s) | 41, 202 |
| EciI | GGCGGA | 2 cut(s) | 64, 906 |
| Eco105I | TACGTA | 1 cut(s) | 898 |
| Eco130I | CCWWGG | 2 cut(s) | 921, 1111 |
| Eco147I | AGGCCT | 1 cut(s) | 1044 |
| Eco31I | GGTCTC | 1 cut(s) | 644 |
| Eco47III | AGCGCT | 2 cut(s) | 403, 746 |
| Eco57I | CTGAAG | 1 cut(s) | 390 |
| Eco88I | CYCGRG | 1 cut(s) | 66 |
| EcoRII | CCWGG | 5 cut(s) | 166, 445, 590, 908, 1044 |
| EcoT14I | CCWWGG | 2 cut(s) | 921, 1111 |
| ErhI | CCWWGG | 2 cut(s) | 921, 1111 |
| Esp3I | CGTCTC | 2 cut(s) | 730, 1065 |
| FaeI | CATG | 3 cut(s) | 741, 1063, 1115 |
| FaiI | YATR | 8 cut(s) | 695, 739, 870, 881, 1005, 1061, 1113, 1148 |
| FaqI | GGGAC | 1 cut(s) | 1099 |
| FatI | CATG | 3 cut(s) | 737, 1059, 1111 |
| FauI | CCCGC | 2 cut(s) | 536, 737 |
| Fnu4HI | GCNGC | 8 cut(s) | 510, 527, 686, 712, 719, 748, 845, 1057 |
| FokI | GGATG | 2 cut(s) | 305, 1199 |
| Fsp4HI | GCNGC | 8 cut(s) | 510, 527, 686, 712, 719, 748, 845, 1057 |
| FspBI | CTAG | 2 cut(s) | 813, 1104 |
| GlaI | GCGC | 9 cut(s) | 11, 208, 403, 452, 523, 525, 589, 746, 805 |
| GluI | GCNGC | 8 cut(s) | 510, 527, 686, 712, 719, 748, 845, 1057 |
| HaeII | RGCGCY | 3 cut(s) | 210, 405, 748 |
| HaeIII | GGCC | 6 cut(s) | 126, 311, 462, 688, 822, 1044 |
| HapII | CCGG | 9 cut(s) | 201, 237, 270, 313, 328, 426, 488, 559, 578 |
| HgaI | GACGC | 1 cut(s) | 43 |
| HhaI | GCGC | 9 cut(s) | 12, 209, 404, 453, 524, 526, 590, 747, 806 |
| Hin1II | CATG | 3 cut(s) | 741, 1063, 1115 |
| Hin6I | GCGC | 9 cut(s) | 10, 207, 402, 451, 522, 524, 588, 745, 804 |
| HinP1I | GCGC | 9 cut(s) | 10, 207, 402, 451, 522, 524, 588, 745, 804 |
| HinfI | GANTC | 9 cut(s) | 194, 299, 343, 547, 753, 905, 913, 944, 989 |
| HpaII | CCGG | 9 cut(s) | 201, 237, 270, 313, 328, 426, 488, 559, 578 |
| HphI | GGTGA | 4 cut(s) | 127, 451, 477, 1091 |
| Hpy166II | GTNNAC | 2 cut(s) | 102, 142 |
| Hpy188I | TCNGA | 8 cut(s) | 178, 292, 348, 393, 538, 800, 949, 1131 |
| Hpy188III | TCNNGA | 2 cut(s) | 109, 319 |
| Hpy8I | GTNNAC | 2 cut(s) | 102, 142 |
| Hpy99I | CGWCG | 6 cut(s) | 59, 83, 115, 125, 284, 997 |
| HpyAV | CCTTC | 3 cut(s) | 220, 1057, 1061 |
| HpyCH4III | ACNGT | 7 cut(s) | 106, 115, 264, 962, 1053, 1076, 1139 |
| HpyCH4IV | ACGT | 5 cut(s) | 81, 357, 384, 479, 897 |
| HpyCH4V | TGCA | 1 cut(s) | 1056 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 158, 215, 459, 473, 509 |
| HpyF3I | CTNAG | 1 cut(s) | 50 |
| HpySE526I | ACGT | 5 cut(s) | 81, 357, 384, 479, 897 |
| Hsp92II | CATG | 3 cut(s) | 741, 1063, 1115 |
| HspAI | GCGC | 9 cut(s) | 10, 207, 402, 451, 522, 524, 588, 745, 804 |
| Kzo9I | GATC | 8 cut(s) | 117, 170, 178, 239, 514, 538, 555, 1009 |
| LmnI | GCTCC | 4 cut(s) | 330, 614, 1112, 1163 |
| Lsp1109I | GCAGC | 6 cut(s) | 496, 513, 698, 734, 856, 1068 |
| LweI | GCATC | 2 cut(s) | 672, 870 |
| MaeI | CTAG | 2 cut(s) | 813, 1104 |
| MaeII | ACGT | 5 cut(s) | 81, 357, 384, 479, 897 |
| MaeIII | GTNAC | 2 cut(s) | 106, 272 |
| MalI | GATC | 8 cut(s) | 119, 172, 180, 241, 516, 540, 557, 1011 |
| MbiI | CCGCTC | 1 cut(s) | 732 |
| MboI | GATC | 8 cut(s) | 117, 170, 178, 239, 514, 538, 555, 1009 |
| MboII | GAAGA | 7 cut(s) | 28, 34, 104, 189, 352, 406, 1128 |
| MflI | RGATCY | 1 cut(s) | 239 |
| MhlI | GDGCHC | 2 cut(s) | 159, 419 |
| MluCI | AATT | 3 cut(s) | 663, 783, 1204 |
| MlyI | GAGTC | 4 cut(s) | 188, 308, 352, 998 |
| MmeI | TCCRAC | 1 cut(s) | 652 |
| MseI | TTAA | 4 cut(s) | 567, 891, 1017, 1218 |
| MslI | CAYNNNNRTG | 1 cut(s) | 113 |
| MspA1I | CMGCKG | 2 cut(s) | 718, 847 |
| MspCI | CTTAAG | 1 cut(s) | 1016 |
| MspI | CCGG | 9 cut(s) | 201, 237, 270, 313, 328, 426, 488, 559, 578 |
| MspR9I | CCNGG | 8 cut(s) | 168, 237, 313, 328, 447, 592, 910, 1046 |
| MvaI | CCWGG | 5 cut(s) | 168, 447, 592, 910, 1046 |
| MvnI | CGCG | 4 cut(s) | 152, 453, 524, 543 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 158, 215, 459, 473, 509 |
| NciI | CCSGG | 3 cut(s) | 237, 313, 328 |
| NcoI | CCATGG | 1 cut(s) | 1111 |
| NdeII | GATC | 8 cut(s) | 117, 170, 178, 239, 514, 538, 555, 1009 |
| NheI | GCTAGC | 1 cut(s) | 812 |
| NlaIII | CATG | 3 cut(s) | 741, 1063, 1115 |
| NlaIV | GGNNCC | 1 cut(s) | 241 |
| NmeAIII | GCCGAG | 1 cut(s) | 114 |
| NmuCI | GTSAC | 1 cut(s) | 106 |
| OliI | CACNNNNGTG | 1 cut(s) | 113 |
| PaeR7I | CTCGAG | 1 cut(s) | 66 |
| PauI | GCGCGC | 1 cut(s) | 522 |
| PceI | AGGCCT | 1 cut(s) | 1044 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 102 |
| PfeI | GAWTC | 5 cut(s) | 547, 753, 905, 913, 944 |
| PfoI | TCCNGGA | 1 cut(s) | 908 |
| PkrI | GCNGC | 8 cut(s) | 511, 528, 687, 713, 720, 749, 846, 1058 |
| Ple19I | CGATCG | 1 cut(s) | 541 |
| PleI | GAGTC | 4 cut(s) | 188, 307, 351, 997 |
| PpsI | GAGTC | 4 cut(s) | 188, 307, 351, 997 |
| Ppu21I | YACGTR | 1 cut(s) | 898 |
| PshBI | ATTAAT | 1 cut(s) | 567 |
| Psp1406I | AACGTT | 1 cut(s) | 479 |
| Psp6I | CCWGG | 5 cut(s) | 166, 445, 590, 908, 1044 |
| PspGI | CCWGG | 5 cut(s) | 166, 445, 590, 908, 1044 |
| PspN4I | GGNNCC | 1 cut(s) | 241 |
| PspPI | GGNCC | 3 cut(s) | 310, 461, 821 |
| PspXI | VCTCGAGB | 1 cut(s) | 66 |
| PsuI | RGATCY | 1 cut(s) | 239 |
| PteI | GCGCGC | 1 cut(s) | 522 |
| PvuI | CGATCG | 1 cut(s) | 541 |
| PvuII | CAGCTG | 1 cut(s) | 847 |
| RsaI | GTAC | 3 cut(s) | 101, 434, 777 |
| RsaNI | GTAC | 3 cut(s) | 100, 433, 776 |
| RseI | CAYNNNNRTG | 1 cut(s) | 113 |
| SaqAI | TTAA | 4 cut(s) | 567, 891, 1017, 1218 |
| SatI | GCNGC | 8 cut(s) | 510, 527, 686, 712, 719, 748, 845, 1057 |
| Sau3AI | GATC | 8 cut(s) | 117, 170, 178, 239, 514, 538, 555, 1009 |
| Sau96I | GGNCC | 3 cut(s) | 310, 461, 821 |
| SchI | GAGTC | 4 cut(s) | 188, 308, 352, 998 |
| ScrFI | CCNGG | 8 cut(s) | 168, 237, 313, 328, 447, 592, 910, 1046 |
| SduI | GDGCHC | 2 cut(s) | 159, 419 |
| SfaNI | GCATC | 2 cut(s) | 672, 870 |
| Sfr274I | CTCGAG | 1 cut(s) | 66 |
| SlaI | CTCGAG | 1 cut(s) | 66 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 113 |
| SmlI | CTYRAG | 3 cut(s) | 66, 572, 1016 |
| SmoI | CTYRAG | 3 cut(s) | 66, 572, 1016 |
| SnaBI | TACGTA | 1 cut(s) | 898 |
| Sse9I | AATT | 3 cut(s) | 663, 783, 1204 |
| SseBI | AGGCCT | 1 cut(s) | 1044 |
| SsiI | CCGC | 8 cut(s) | 75, 152, 543, 685, 718, 730, 917, 1200 |
| SspI | AATATT | 1 cut(s) | 1144 |
| SspMI | CTAG | 2 cut(s) | 813, 1104 |
| StuI | AGGCCT | 1 cut(s) | 1044 |
| StyD4I | CCNGG | 8 cut(s) | 166, 235, 311, 326, 445, 590, 908, 1044 |
| StyI | CCWWGG | 2 cut(s) | 921, 1111 |
| TaaI | ACNGT | 7 cut(s) | 106, 115, 264, 962, 1053, 1076, 1139 |
| TaiI | ACGT | 5 cut(s) | 84, 360, 387, 482, 900 |
| TaqI | TCGA | 6 cut(s) | 67, 120, 192, 623, 734, 1035 |
| TasI | AATT | 3 cut(s) | 663, 783, 1204 |
| TatI | WGTACW | 1 cut(s) | 775 |
| TauI | GCSGC | 2 cut(s) | 688, 721 |
| TfiI | GAWTC | 5 cut(s) | 547, 753, 905, 913, 944 |
| Tru1I | TTAA | 4 cut(s) | 567, 891, 1017, 1218 |
| Tru9I | TTAA | 4 cut(s) | 567, 891, 1017, 1218 |
| TscAI | CASTG | 1 cut(s) | 524 |
| TseFI | GTSAC | 1 cut(s) | 106 |
| TseI | GCWGC | 6 cut(s) | 509, 526, 711, 747, 844, 1056 |
| Tsp45I | GTSAC | 1 cut(s) | 106 |
| TspDTI | ATGAA | 1 cut(s) | 1076 |
| TspGWI | ACGGA | 2 cut(s) | 297, 591 |
| TspRI | CASTG | 1 cut(s) | 524 |
| Vha464I | CTTAAG | 1 cut(s) | 1016 |
| VspI | ATTAAT | 1 cut(s) | 567 |
| XhoI | CTCGAG | 1 cut(s) | 66 |
| XspI | CTAG | 2 cut(s) | 813, 1104 |