Prupe.1G256400_v2.0.a1

isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
26663999 .. 26666017
2019 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G256400.1

Sequence Viewer

Length: 1227 bp
ATGGCTTCACACTCCTTCGCTGTTGCTCTCTTCTTCTTCTTCCTCCTCAACCAAGCTTCACTTCAAGTCTTCGCCGACTTGGTGCTAGAAGACGGGTACACCGTCACGACAGTGATCGACGGCCACAAACTCGGCATCAACCCGTACTCGGTGCTCCCTCGTCCTGGATCGTCCGATCTTCTCGTCCTCGACTCTTCCGGTAGTGCCGTATACACAGTACCGTTCCCCATACCAGGATCCCAAGATAGTGTGATTAAACGGTTCTCCGGTAACGGCGACGAGGGTTATTCGGACGGCGAACCGGGTTTGGCCCAGTTCAAGAAGCCCCGGAGCTTCGCTGTGGACCCTAAAGGAAATGTCTTCGTTGCCGATAGGGGCAACAACGTCATTCGGAAAATAAGCGCTTCAGGTAGTGTGAGTACAATTGCTGGAGGGTACACTCACTCACTGAAGCCTGGACGGGAGGACGGCCCTTCTCAAAACGCAACGTTTTCGCCCGATTTGGAGCTGGCTTTGTTTGCCGATAAGTGCGCGCTTCTCATCTCGGACCGCGGGAGTCAGCTGGTGCGGTTGATTAATCTCAAGCCGGAAGACTGTGCTAGGTCTTCTCCGTCGGCACTTGGAGCAGCTTCGATTTGGCTTTTGGGTCTCGGATTGTCATGTCTTTTCGGGCTGCTTGTTGGAATTGTGATTCGGCCTTATATTATCCGCAATGAGGGCCGCAACAGGCTCGGATTCAGCGCGACATGGAGGCGCTGCCAAATCAATCTGGGGAAGCAAGTACAGACTCTTTGCTTCGCCATCAAAAGCGCAACTGCTAGCTCCACCCCAGCTGTGTCGCTGCTGAGGCGGTTGTTTTTGTTGTGCATCTCTCATCTTTCTCTTATGTTTAGAACCAACCATGTAGGGTCCCGAGTTTCGCCTAAGGAATGTGTGTCTTTGATTGATTGTGATTTTCATAGCGATAGTAGTTTCAAGGTAACAGAGATAACAGATTCGTCCAAGTATGTGGATCAGTTGAAGGATTTGGTAGGTGTTGATGGAAGCATGGAGTTGTGTAGCAGGAAGCAAGAAGATAGTAATGATGGGAGGAGTGATGTGTTATCTGGTTCTCATGGAAGAATAGAAGGTATGATAGACAGTAATATTATGGGATTTGTGGAGGGAGCTAAAGAAACAACTCTGCCGGCTTTGGGAAGTAATTATGGTTTAGTTAAAAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

409

Amino Acids

43.91

Weight (kDa)

8.03

Isoelectric Point (pI)

35.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 210
AccII CGCG 3 cut(s) 533, 552, 743
AciI CCGC 6 cut(s) 550, 552, 568, 709, 721, 850
AclI AACGTT 1 cut(s) 488
AclWI GGATC 4 cut(s) 175, 231, 244, 1020
AcoI YGGCCR 1 cut(s) 121
AcuI CTGAAG 2 cut(s) 390, 470
AfaI GTAC 6 cut(s) 98, 146, 219, 421, 437, 783
AfeI AGCGCT 1 cut(s) 403
AfiI CCNNNNNNNGG 5 cut(s) 148, 164, 233, 715, 1193
AgsI TTSAA 4 cut(s) 65, 319, 976, 1021
AjnI CCWGG 3 cut(s) 163, 232, 454
AjuI GAANNNNNNNTTGG 2 cut(s) 45, 77
AleI CACNNNNGTG 1 cut(s) 110
AluBI AGCT 8 cut(s) 56, 333, 508, 562, 629, 822, 833, 1169
AluI AGCT 8 cut(s) 56, 333, 508, 562, 629, 822, 833, 1169
Alw21I GWGCWC 1 cut(s) 156
Alw26I GTCTC 1 cut(s) 653
AlwI GGATC 4 cut(s) 175, 231, 244, 1020
Ama87I CYCGRG 1 cut(s) 912
Aor51HI AGCGCT 1 cut(s) 403
AoxI GGCC 5 cut(s) 121, 309, 469, 695, 718
ApeKI GCWGC 4 cut(s) 626, 673, 756, 841
AseI ATTAAT 1 cut(s) 576
AspLEI GCGC 6 cut(s) 404, 533, 535, 743, 756, 812
AspS9I GGNCC 6 cut(s) 310, 343, 470, 547, 718, 909
AsuC2I CCSGG 2 cut(s) 303, 328
AsuNHI GCTAGC 1 cut(s) 818
AvaI CYCGRG 1 cut(s) 912
AvaII GGWCC 3 cut(s) 343, 547, 909
AxyI CCTNAGG 1 cut(s) 924
BamHI GGATCC 1 cut(s) 236
BbsI GAAGAC 5 cut(s) 61, 96, 352, 597, 597
Bbv12I GWGCWC 1 cut(s) 156
BbvCI CCTCAGC 1 cut(s) 845
BbvI GCAGC 4 cut(s) 638, 660, 743, 828
BccI CCATC 3 cut(s) 809, 1034, 1079
BceAI ACGGC 5 cut(s) 136, 191, 289, 310, 484
BcgI CGANNNNNNTGC 4 cut(s) 474, 508, 712, 746
BciT130I CCWGG 3 cut(s) 165, 234, 456
BcnI CCSGG 2 cut(s) 303, 328
BcoDI GTCTC 1 cut(s) 653
BfaI CTAG 3 cut(s) 86, 600, 819
BfoI RGCGCY 2 cut(s) 405, 757
BisI GCNGC 5 cut(s) 627, 674, 721, 757, 842
BlsI GCNGC 5 cut(s) 628, 675, 722, 758, 843
Bme1390I CCNGG 5 cut(s) 165, 234, 303, 328, 456
Bme18I GGWCC 3 cut(s) 343, 547, 909
BmeT110I CYCGRG 1 cut(s) 912
BmgT120I GGNCC 6 cut(s) 310, 343, 470, 547, 718, 909
BmiI GGNNCC 4 cut(s) 238, 345, 910, 911
BmrFI CCNGG 5 cut(s) 165, 234, 303, 328, 456
BmrI ACTGGG 1 cut(s) 307
BmsI GCATC 2 cut(s) 144, 876
BmtI GCTAGC 1 cut(s) 822
BmuI ACTGGG 1 cut(s) 307
BpiI GAAGAC 5 cut(s) 61, 96, 352, 597, 597
BpmI CTGGAG 1 cut(s) 450
Bpu10I CCTNAGC 1 cut(s) 845
BpuEI CTTGAG 1 cut(s) 566
BpuMI CCSGG 2 cut(s) 303, 328
BsaI GGTCTC 1 cut(s) 653
BsaJI CCNNGG 2 cut(s) 326, 550
BsaWI WCCGGW 2 cut(s) 197, 266
Bsc4I CCNNNNNNNGG 5 cut(s) 148, 164, 233, 715, 1193
Bse118I RCCGGY 1 cut(s) 1186
Bse1I ACTGG 1 cut(s) 313
Bse21I CCTNAGG 1 cut(s) 924
Bse3DI GCAATG 1 cut(s) 718
BseBI CCWGG 3 cut(s) 165, 234, 456
BseDI CCNNGG 2 cut(s) 326, 550
BseLI CCNNNNNNNGG 5 cut(s) 148, 164, 233, 715, 1193
BseMI GCAATG 1 cut(s) 718
BseMII CTCAG 1 cut(s) 836
BseNI ACTGG 1 cut(s) 313
BsePI GCGCGC 1 cut(s) 531
BseRI GAGGAG 2 cut(s) 35, 1105
BseXI GCAGC 4 cut(s) 638, 660, 743, 828
BseYI CCCAGC 1 cut(s) 829
Bsh1236I CGCG 3 cut(s) 533, 552, 743
BshFI GGCC 5 cut(s) 123, 311, 471, 697, 720
BsiHKAI GWGCWC 1 cut(s) 156
BsiHKCI CYCGRG 1 cut(s) 912
BsiSI CCGG 6 cut(s) 198, 267, 302, 328, 587, 1187
BslFI GGGAC 1 cut(s) 895
BslI CCNNNNNNNGG 5 cut(s) 148, 164, 233, 715, 1193
BsmAI GTCTC 1 cut(s) 653
BsmFI GGGAC 1 cut(s) 895
BsnI GGCC 5 cut(s) 123, 311, 471, 697, 720
Bso31I GGTCTC 1 cut(s) 653
BsoBI CYCGRG 1 cut(s) 912
Bsp1286I GDGCHC 1 cut(s) 156
Bsp143I GATC 5 cut(s) 114, 167, 175, 236, 1012
BspACI CCGC 6 cut(s) 550, 552, 568, 709, 721, 850
BspANI GGCC 5 cut(s) 123, 311, 471, 697, 720
BspCNI CTCAG 1 cut(s) 837
BspFNI CGCG 3 cut(s) 533, 552, 743
BspLI GGNNCC 4 cut(s) 238, 345, 910, 911
BspOI GCTAGC 1 cut(s) 822
BspPI GGATC 4 cut(s) 175, 231, 244, 1020
BspTNI GGTCTC 1 cut(s) 653
BsrDI GCAATG 1 cut(s) 718
BsrFI RCCGGY 1 cut(s) 1186
BsrI ACTGG 1 cut(s) 313
BssAI RCCGGY 1 cut(s) 1186
BssECI CCNNGG 2 cut(s) 326, 550
BssHII GCGCGC 1 cut(s) 531
BssMI GATC 5 cut(s) 114, 167, 175, 236, 1012
BssNAI GTATAC 1 cut(s) 211
Bst1107I GTATAC 1 cut(s) 211
Bst2UI CCWGG 3 cut(s) 165, 234, 456
Bst4CI ACNGT 7 cut(s) 103, 112, 217, 222, 261, 596, 1142
Bst6I CTCTTC 2 cut(s) 35, 199
BstC8I GCNNGC 4 cut(s) 510, 533, 820, 1188
BstDEI CTNAG 2 cut(s) 845, 924
BstDSI CCRYGG 1 cut(s) 550
BstFNI CGCG 3 cut(s) 533, 552, 743
BstH2I RGCGCY 2 cut(s) 405, 757
BstHHI GCGC 6 cut(s) 404, 533, 535, 743, 756, 812
BstKTI GATC 5 cut(s) 117, 170, 178, 239, 1015
BstMAI GTCTC 1 cut(s) 653
BstMBI GATC 5 cut(s) 114, 167, 175, 236, 1012
BstMWI GCNNNNNNNGC 4 cut(s) 518, 623, 717, 847
BstNI CCWGG 3 cut(s) 165, 234, 456
BstSCI CCNGG 5 cut(s) 163, 232, 301, 326, 454
BstUI CGCG 3 cut(s) 533, 552, 743
BstV1I GCAGC 4 cut(s) 638, 660, 743, 828
BstV2I GAAGAC 5 cut(s) 61, 96, 352, 597, 597
BstX2I RGATCY 1 cut(s) 236
BstXI CCANNNNNNTGG 1 cut(s) 1009
BstYI RGATCY 1 cut(s) 236
BstZ17I GTATAC 1 cut(s) 211
Bsu36I CCTNAGG 1 cut(s) 924
BsuRI GGCC 5 cut(s) 123, 311, 471, 697, 720
BtgI CCRYGG 1 cut(s) 550
BtsIMutI CAGTG 2 cut(s) 117, 446
Cac8I GCNNGC 4 cut(s) 510, 533, 820, 1188
CfoI GCGC 6 cut(s) 404, 533, 535, 743, 756, 812
Cfr10I RCCGGY 1 cut(s) 1186
Cfr13I GGNCC 6 cut(s) 310, 343, 470, 547, 718, 909
Cfr42I CCGCGG 1 cut(s) 553
CpoI CGGWCCG 1 cut(s) 547
Csp6I GTAC 6 cut(s) 97, 145, 218, 420, 436, 782
CspI CGGWCCG 1 cut(s) 547
CviAII CATG 5 cut(s) 660, 747, 902, 1048, 1115
CviQI GTAC 6 cut(s) 97, 145, 218, 420, 436, 782
DdeI CTNAG 2 cut(s) 845, 924
DpnI GATC 5 cut(s) 116, 169, 177, 238, 1014
DpnII GATC 5 cut(s) 114, 167, 175, 236, 1012
EaeI YGGCCR 1 cut(s) 121
Eam1104I CTCTTC 2 cut(s) 35, 199
EarI CTCTTC 2 cut(s) 35, 199
Eco31I GGTCTC 1 cut(s) 653
Eco47I GGWCC 3 cut(s) 343, 547, 909
Eco47III AGCGCT 1 cut(s) 403
Eco57I CTGAAG 2 cut(s) 390, 470
Eco81I CCTNAGG 1 cut(s) 924
Eco88I CYCGRG 1 cut(s) 912
EcoO109I RGGNCCY 1 cut(s) 909
EcoRII CCWGG 3 cut(s) 163, 232, 454
FaeI CATG 5 cut(s) 663, 750, 905, 1051, 1118
FalI AAGNNNNNCTT 2 cut(s) 45, 77
FaqI GGGAC 1 cut(s) 895
FatI CATG 5 cut(s) 659, 746, 901, 1047, 1114
FauI CCCGC 1 cut(s) 545
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 5 cut(s) 627, 674, 721, 757, 842
Fsp4HI GCNGC 5 cut(s) 627, 674, 721, 757, 842
FspBI CTAG 3 cut(s) 86, 600, 819
GlaI GCGC 6 cut(s) 403, 532, 534, 742, 755, 811
GluI GCNGC 5 cut(s) 627, 674, 721, 757, 842
GsaI CCCAGC 1 cut(s) 833
GsuI CTGGAG 1 cut(s) 450
HaeII RGCGCY 2 cut(s) 405, 757
HaeIII GGCC 5 cut(s) 123, 311, 471, 697, 720
HapII CCGG 6 cut(s) 198, 267, 302, 328, 587, 1187
HhaI GCGC 6 cut(s) 404, 533, 535, 743, 756, 812
Hin1II CATG 5 cut(s) 663, 750, 905, 1051, 1118
Hin6I GCGC 6 cut(s) 402, 531, 533, 741, 754, 810
HinP1I GCGC 6 cut(s) 402, 531, 533, 741, 754, 810
HindIII AAGCTT 1 cut(s) 54
HinfI GANTC 6 cut(s) 191, 556, 691, 735, 787, 995
HpaII CCGG 6 cut(s) 198, 267, 302, 328, 587, 1187
Hpy166II GTNNAC 4 cut(s) 99, 211, 343, 438
Hpy188I TCNGA 6 cut(s) 175, 292, 393, 547, 653, 734
Hpy188III TCNNGA 3 cut(s) 106, 319, 912
Hpy8I GTNNAC 4 cut(s) 99, 211, 343, 438
Hpy99I CGWCG 3 cut(s) 122, 281, 616
HpyAV CCTTC 4 cut(s) 25, 483, 1015, 1121
HpyCH4III ACNGT 7 cut(s) 103, 112, 217, 222, 261, 596, 1142
HpyCH4IV ACGT 2 cut(s) 384, 488
HpyCH4V TGCA 1 cut(s) 867
HpyF10VI GCNNNNNNNGC 4 cut(s) 518, 623, 717, 847
HpyF3I CTNAG 2 cut(s) 845, 924
HpySE526I ACGT 2 cut(s) 384, 488
Hsp92II CATG 5 cut(s) 663, 750, 905, 1051, 1118
HspAI GCGC 6 cut(s) 402, 531, 533, 741, 754, 810
KflI GGGWCCC 1 cut(s) 909
KroI GCCGGC 1 cut(s) 1186
KroNI GCCGGC 1 cut(s) 1188
KspI CCGCGG 1 cut(s) 553
Kzo9I GATC 5 cut(s) 114, 167, 175, 236, 1012
LmnI GCTCC 6 cut(s) 159, 330, 505, 623, 827, 1166
Lsp1109I GCAGC 4 cut(s) 638, 660, 743, 828
LweI GCATC 2 cut(s) 144, 876
MaeI CTAG 3 cut(s) 86, 600, 819
MaeII ACGT 2 cut(s) 384, 488
MaeIII GTNAC 3 cut(s) 103, 269, 979
MalI GATC 5 cut(s) 116, 169, 177, 238, 1014
MboI GATC 5 cut(s) 114, 167, 175, 236, 1012
MfeI CAATTG 1 cut(s) 423
MflI RGATCY 1 cut(s) 236
MhlI GDGCHC 1 cut(s) 156
MluCI AATT 3 cut(s) 423, 684, 1201
MlyI GAGTC 3 cut(s) 185, 565, 781
MmeI TCCRAC 1 cut(s) 661
MroNI GCCGGC 1 cut(s) 1186
MseI TTAA 3 cut(s) 255, 576, 1215
MslI CAYNNNNRTG 1 cut(s) 110
MspA1I CMGCKG 3 cut(s) 552, 562, 833
MspI CCGG 6 cut(s) 198, 267, 302, 328, 587, 1187
MspR9I CCNGG 5 cut(s) 165, 234, 303, 328, 456
MunI CAATTG 1 cut(s) 423
MvaI CCWGG 3 cut(s) 165, 234, 456
MvnI CGCG 3 cut(s) 533, 552, 743
MwoI GCNNNNNNNGC 4 cut(s) 518, 623, 717, 847
NaeI GCCGGC 1 cut(s) 1188
NciI CCSGG 2 cut(s) 303, 328
NdeII GATC 5 cut(s) 114, 167, 175, 236, 1012
NgoMIV GCCGGC 1 cut(s) 1186
NheI GCTAGC 1 cut(s) 818
NlaIII CATG 5 cut(s) 663, 750, 905, 1051, 1118
NlaIV GGNNCC 4 cut(s) 238, 345, 910, 911
NmeAIII GCCGAG 1 cut(s) 111
NmuCI GTSAC 1 cut(s) 103
OliI CACNNNNGTG 1 cut(s) 110
PauI GCGCGC 1 cut(s) 531
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PdiI GCCGGC 1 cut(s) 1188
PfeI GAWTC 3 cut(s) 691, 735, 995
PfoI TCCNGGA 1 cut(s) 163
PkrI GCNGC 5 cut(s) 628, 675, 722, 758, 843
PleI GAGTC 3 cut(s) 185, 564, 781
PpsI GAGTC 3 cut(s) 185, 564, 781
PpuMI RGGWCCY 1 cut(s) 909
PshBI ATTAAT 1 cut(s) 576
Psp1406I AACGTT 1 cut(s) 488
Psp5II RGGWCCY 1 cut(s) 909
Psp6I CCWGG 3 cut(s) 163, 232, 454
PspFI CCCAGC 1 cut(s) 829
PspGI CCWGG 3 cut(s) 163, 232, 454
PspN4I GGNNCC 4 cut(s) 238, 345, 910, 911
PspPI GGNCC 6 cut(s) 310, 343, 470, 547, 718, 909
PspPPI RGGWCCY 1 cut(s) 909
PsuI RGATCY 1 cut(s) 236
PteI GCGCGC 1 cut(s) 531
PvuII CAGCTG 2 cut(s) 562, 833
RsaI GTAC 6 cut(s) 98, 146, 219, 421, 437, 783
RsaNI GTAC 6 cut(s) 97, 145, 218, 420, 436, 782
RseI CAYNNNNRTG 1 cut(s) 110
Rsr2I CGGWCCG 1 cut(s) 547
RsrII CGGWCCG 1 cut(s) 547
SacII CCGCGG 1 cut(s) 553
SaqAI TTAA 3 cut(s) 255, 576, 1215
SatI GCNGC 5 cut(s) 627, 674, 721, 757, 842
Sau3AI GATC 5 cut(s) 114, 167, 175, 236, 1012
Sau96I GGNCC 6 cut(s) 310, 343, 470, 547, 718, 909
SchI GAGTC 3 cut(s) 185, 565, 781
ScrFI CCNGG 5 cut(s) 165, 234, 303, 328, 456
SduI GDGCHC 1 cut(s) 156
SfaNI GCATC 2 cut(s) 144, 876
Sfr303I CCGCGG 1 cut(s) 553
SgrBI CCGCGG 1 cut(s) 553
SinI GGWCC 3 cut(s) 343, 547, 909
SmiMI CAYNNNNRTG 1 cut(s) 110
SmlI CTYRAG 1 cut(s) 581
SmoI CTYRAG 1 cut(s) 581
Sse9I AATT 3 cut(s) 423, 684, 1201
SsiI CCGC 6 cut(s) 550, 552, 568, 709, 721, 850
SspI AATATT 1 cut(s) 1147
SspMI CTAG 3 cut(s) 86, 600, 819
StyD4I CCNGG 5 cut(s) 163, 232, 301, 326, 454
TaaI ACNGT 7 cut(s) 103, 112, 217, 222, 261, 596, 1142
TaiI ACGT 2 cut(s) 387, 491
TaqI TCGA 3 cut(s) 117, 189, 632
TasI AATT 3 cut(s) 423, 684, 1201
TatI WGTACW 2 cut(s) 419, 781
TauI GCSGC 1 cut(s) 723
TfiI GAWTC 3 cut(s) 691, 735, 995
Tru1I TTAA 3 cut(s) 255, 576, 1215
Tru9I TTAA 3 cut(s) 255, 576, 1215
TscAI CASTG 2 cut(s) 117, 453
TseFI GTSAC 1 cut(s) 103
TseI GCWGC 4 cut(s) 626, 673, 756, 841
Tsp45I GTSAC 1 cut(s) 103
TspDTI ATGAA 1 cut(s) 947
TspGWI ACGGA 1 cut(s) 600
TspRI CASTG 2 cut(s) 117, 453
VpaK11BI GGWCC 3 cut(s) 343, 547, 909
VspI ATTAAT 1 cut(s) 576
XmiI GTMKAC 1 cut(s) 210
XspI CTAG 3 cut(s) 86, 600, 819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.