Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0005687

Physical Location & Seq

Genomic Coordinates Forward (+)

7042454 .. 7045607

Gene Structure 3154 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1099700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGCTTCTTCTCTCTGCAACCACCCACCAGCACCCGTCAATTTCCACTTCTACCCTCCTCTTTCCCTCTATTTCCCACAAACTCCCCGCCTCCCTCAAACCCAACGCCACCTCCACTCCCCGACCCCATGACCTCCTCACCATCAACGCCTTCTCCCCCTCCTCCCTCCAAAACCCCAACCCTAGCTCCCCCCAGACCATCCGCCACGTCACTCACTCCGCCTCCGATGGCGACCCCGATTCCAATTCCATGGTCTCCTCCGCCTCCGCCGTCGCCTCCGCCATCCGCAGAGCCTCCACTTCGCCCGTCGACTTCATGCAGAGGATCGAGAAGGACCAGAAGGGCGGCATCGTGCTCCCCAGCCCCGACTTTCAAAGACTCTGCATTCAGCAGTTGGACCTCTTTCGCCGAACCGTCGACCCCGGTGCTCTCCTCTCGGTGTATGTACGACCAGCTGGTAGTTATGTGATGGACCGATTAGAGCTGCGTAGGGTAATTTGCCATCCGGGAGTGAAGGCATCAGACATTGTGATATTAGTCGGAAGTTTTAGTGTTGCTGCTGGTTTTCGCGCCGCAGAGGCCGTGCTCTCCAATCACAAAGTGGAAGTTGTAGCTGAGTGTAAAGCTGTGGTTTTTCCGATGGTGAAGCACCCCTTTGTGGTAGGCTTCTTGGTTGCTGAACTTCCCGGGATGGAAATGCCTCCGCCACCCGGGAGTGTTCAGGGTGAGGGTCGTGATTTGGTTTGCCGCCCGACTCCCGAGGAAGCCTATGCTTTGCCTCCAAGCTCCAATGTCAAATCTTGGGGTACTCCTCGCAGTCTGGATGATCATGCCGAACCATCATTAAGAGTTTACAAGTTTAGTGCTGAGCAGATATCAAATGCAATCAACATTTCTCGGTCTATAGCTTTGGCGTATGTTATGGATCAGAAGGCAATGCTACTCCAGCAGTCATCATGGCAGAATAATGTAAGGATGGGTAGTCTGGTTGAACAAATACGTGGTCCTCTTTCTAGCCTTCGAACCTTAAGTAAAATGTTATCCATGCATATGAAGAGGAGTGAGATTTCTTATGACATTGTTGAAAATATACGGGTGCAAGGCGATCATATGAAAGATACCCTTCAGCAACTCCAGGATGCTGCTAATATCATGCGCTCTGGTGAACATGATTCAACATATTCCTATCCTGACTCAGCGAGGTCTCGGTTAATGAATAACCTTCCAAGGGATAGTTCCAGCATTAAGATGCAAGTTCCAAGCGAACAACATTCTCTAAATGCCACAGCCAAAGATACGGAGATGCCCATGCCACCCCTAGCCCTTGCTCCTTTACAGCAAAATGGGATTAGACCATGCAATGTTTCTGATATACTCGTAGATTTGGTTGAAGCTGTACGACCTCTTGCTAAAAACCAGGAGCGTGTGGTAGAACTGAATGAACTTGGAAACTCTTTGCAAGTTGCTGTAGAAGAACCTGCTTTGCGACAGGCTCTGAGCAATTTAATCGAGAGTGCATTACTGCGTACGCACAGTGGGGGAAAGGTAGAAATTGTGTCTACTGGAGCACCAGCAGGTGGTGCTCTTGTGGTAATTGATGACGATGGGCCTGATATGCACTATATGACACAAATGCATTCTCTCACTCCTTTTGGAGCCGATCTCTTCTCAGAAAATATGGTTGAAGACAACATGACCTGGAACTTTGTGGCCGGACTGACAGTTGCTCGTGAGATCCTCGAAAGTTATGGCTGTGTTGTCCGTGTCATATCACCCCGAATCACAGATGCTGAACTTGGAGCAGGTGGAACTCGAGTAGAACTGTGGCTGCCTTCTCTCATGGAAATGTCCGATATTGATGACCCTGCTCAGGAGGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009593 GO:0009987 GO:0010109 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019222 GO:0019538 GO:0031323 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0048037 GO:0048038 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051775 GO:0051776 GO:0060255 GO:0065007 GO:0071704 GO:0080005 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

No domains found.

Protein Analysis

627

Amino Acids

68.17

Weight (kDa)

5.61

Isoelectric Point (pI)

57.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	492 - 611	7.7e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005687)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67840 AT1G67840
fragaria_vesca	FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g35670
malus_domestica	MD13G1099700.v1.1
prunus_persica	Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1
pyrus_communis	pycom12g22130 pycom13g08710
rosa_chinensis	RchiOBHm_Chr4g0433151
rosa_laevigata	RLG00000006779
rosa_multiflora	Rmu_sc0020880.1_g000001 Rmu_ssc0000295.1_g000015
rosa_roxburghii	Rroxscaffold_5G00374630
rosa_rugosa	Rorug04G0266300 Rorug04G0266400
rosa_samantha	Rh4AG320100 Rh4BG328300 Rh4CG343700 Rh4DG323700
rosa_wichuraiana	Rw4G027790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1565, 1793
Acc36I	ACCTGC	3 cut(s)	1486, 1565, 1793
AccB7I	CCANNNNNTGG	1 cut(s)	1577
AccI	GTMKAC	3 cut(s)	309, 417, 1559
AccII	CGCG	1 cut(s)	570
AclWI	GGATC	3 cut(s)	332, 933, 1729
AcoI	YGGCCR	1 cut(s)	1710
AcuI	CTGAAG	1 cut(s)	1109
AdeI	CACNNNGTG	1 cut(s)	601
AfaI	GTAC	4 cut(s)	447, 808, 1398, 1528
AfiI	CCNNNNNNNGG	5 cut(s)	658, 710, 1228, 1577, 1870
AflII	CTTAAG	1 cut(s)	1027
AgsI	TTSAA	6 cut(s)	374, 992, 1085, 1176, 1391, 1685
AjiI	CACGTC	1 cut(s)	208
AjnI	CCWGG	3 cut(s)	1134, 1416, 1697
AjuI	GAANNNNNNNTTGG	2 cut(s)	1219, 1251
AluBI	AGCT	8 cut(s)	186, 455, 484, 614, 626, 786, 908, 1394
AluI	AGCT	8 cut(s)	186, 455, 484, 614, 626, 786, 908, 1394
Alw21I	GWGCWC	5 cut(s)	357, 430, 588, 1570, 1585
Alw26I	GTCTC	2 cut(s)	259, 1209
AlwI	GGATC	3 cut(s)	332, 933, 1729
AlwNI	CAGNNNCTG	2 cut(s)	1495, 1790
Ama87I	CYCGRG	4 cut(s)	686, 710, 758, 1812
AoxI	GGCC	3 cut(s)	579, 1607, 1710
ApeKI	GCWGC	4 cut(s)	484, 557, 1142, 1828
ArsI	GACNNNNNNTTYG	2 cut(s)	988, 1020
AspLEI	GCGC	2 cut(s)	572, 1158
AspS9I	GGNCC	5 cut(s)	334, 397, 472, 1004, 1607
AsuC2I	CCSGG	6 cut(s)	423, 507, 687, 688, 711, 712
AsuHPI	GGTGA	5 cut(s)	130, 655, 737, 1175, 1764
AsuII	TTCGAA	1 cut(s)	1021
AvaI	CYCGRG	4 cut(s)	686, 710, 758, 1812
AvaII	GGWCC	4 cut(s)	334, 397, 472, 1004
BauI	CACGAG	1 cut(s)	1728
BbsI	GAAGAC	1 cut(s)	1692
Bbv12I	GWGCWC	5 cut(s)	357, 430, 588, 1570, 1585
BbvI	GCAGC	4 cut(s)	471, 544, 1129, 1815
BceAI	ACGGC	2 cut(s)	254, 566
BcgI	CGANNNNNNTGC	4 cut(s)	407, 441, 1489, 1523
BciT130I	CCWGG	3 cut(s)	1136, 1418, 1699
BclI	TGATCA	1 cut(s)	826
BcnI	CCSGG	6 cut(s)	423, 507, 687, 688, 711, 712
BcoDI	GTCTC	2 cut(s)	259, 1209
BfaI	CTAG	3 cut(s)	183, 1014, 1319
BfmI	CTRYAG	2 cut(s)	903, 1467
BfrI	CTTAAG	1 cut(s)	1027
BfuAI	ACCTGC	3 cut(s)	1486, 1565, 1793
BglI	GCCNNNNNGGC	1 cut(s)	578
BisI	GCNGC	7 cut(s)	346, 485, 558, 573, 748, 1143, 1829
BlpI	GCTNAGC	1 cut(s)	867
BlsI	GCNGC	7 cut(s)	347, 486, 559, 574, 749, 1144, 1830
Bme1390I	CCNGG	9 cut(s)	423, 507, 687, 688, 711, 712, 1136, 1418, 1699
Bme18I	GGWCC	4 cut(s)	334, 397, 472, 1004
BmeT110I	CYCGRG	4 cut(s)	686, 710, 758, 1812
BmgBI	CACGTC	1 cut(s)	208
BmgT120I	GGNCC	5 cut(s)	334, 397, 472, 1004, 1607
BmiI	GGNNCC	1 cut(s)	1657
BmrFI	CCNGG	9 cut(s)	423, 507, 687, 688, 711, 712, 1136, 1418, 1699
BmsI	GCATC	6 cut(s)	357, 527, 1129, 1239, 1293, 1777
BpiI	GAAGAC	1 cut(s)	1692
BplI	GAGNNNNNCTC	2 cut(s)	1647, 1679
BpmI	CTGGAG	3 cut(s)	929, 1118, 1584
Bpu10I	CCTNAGC	1 cut(s)	1869
Bpu1102I	GCTNAGC	1 cut(s)	867
Bpu14I	TTCGAA	1 cut(s)	1021
BpuMI	CCSGG	6 cut(s)	423, 507, 687, 688, 711, 712
BsaAI	YACGTR	1 cut(s)	1001
BsaI	GGTCTC	2 cut(s)	259, 1209
BsaJI	CCNNGG	6 cut(s)	249, 421, 686, 710, 759, 1226
Bsc4I	CCNNNNNNNGG	5 cut(s)	658, 710, 1228, 1577, 1870
Bse1I	ACTGG	1 cut(s)	1567
Bse3DI	GCAATG	2 cut(s)	942, 1366
BseBI	CCWGG	3 cut(s)	1136, 1418, 1699
BseDI	CCNNGG	6 cut(s)	249, 421, 686, 710, 759, 1226
BseGI	GGATG	7 cut(s)	198, 282, 502, 696, 829, 981, 1144
BseLI	CCNNNNNNNGG	5 cut(s)	658, 710, 1228, 1577, 1870
BseMI	GCAATG	2 cut(s)	942, 1366
BseMII	CTCAG	5 cut(s)	606, 858, 1209, 1487, 1683
BseNI	ACTGG	1 cut(s)	1567
BseRI	GAGGAG	7 cut(s)	47, 125, 151, 247, 422, 801, 1072
BseXI	GCAGC	4 cut(s)	471, 544, 1129, 1815
BseYI	CCCAGC	1 cut(s)	359
Bsh1236I	CGCG	1 cut(s)	570
BshFI	GGCC	3 cut(s)	581, 1609, 1712
BsiHKAI	GWGCWC	5 cut(s)	357, 430, 588, 1570, 1585
BsiHKCI	CYCGRG	4 cut(s)	686, 710, 758, 1812
BsiSI	CCGG	5 cut(s)	423, 506, 687, 711, 1713
BsiWI	CGTACG	1 cut(s)	1526
BslI	CCNNNNNNNGG	5 cut(s)	658, 710, 1228, 1577, 1870
BsmAI	GTCTC	2 cut(s)	259, 1209
BsmI	GAATGC	2 cut(s)	384, 1636
BsnI	GGCC	3 cut(s)	581, 1609, 1712
Bso31I	GGTCTC	2 cut(s)	259, 1209
BsoBI	CYCGRG	4 cut(s)	686, 710, 758, 1812
Bsp119I	TTCGAA	1 cut(s)	1021
Bsp1286I	GDGCHC	5 cut(s)	357, 430, 588, 1570, 1585
Bsp143I	GATC	6 cut(s)	324, 826, 925, 1105, 1660, 1734
Bsp1720I	GCTNAGC	1 cut(s)	867
Bsp19I	CCATGG	1 cut(s)	249
BspANI	GGCC	3 cut(s)	581, 1609, 1712
BspCNI	CTCAG	5 cut(s)	607, 859, 1208, 1488, 1682
BspFNI	CGCG	1 cut(s)	570
BspLI	GGNNCC	1 cut(s)	1657
BspMI	ACCTGC	3 cut(s)	1486, 1565, 1793
BspPI	GGATC	3 cut(s)	332, 933, 1729
BspT104I	TTCGAA	1 cut(s)	1021
BspTI	CTTAAG	1 cut(s)	1027
BspTNI	GGTCTC	2 cut(s)	259, 1209
BsrDI	GCAATG	2 cut(s)	942, 1366
BsrI	ACTGG	1 cut(s)	1567
BssECI	CCNNGG	6 cut(s)	249, 421, 686, 710, 759, 1226
BssMI	GATC	6 cut(s)	324, 826, 925, 1105, 1660, 1734
BssSI	CACGAG	1 cut(s)	1728
BssT1I	CCWWGG	2 cut(s)	249, 1226
Bst2BI	CACGAG	1 cut(s)	1728
Bst2UI	CCWGG	3 cut(s)	1136, 1418, 1699
Bst4CI	ACNGT	4 cut(s)	415, 1535, 1723, 1824
Bst6I	CTCTTC	2 cut(s)	1049, 1670
BstAFI	CTTAAG	1 cut(s)	1027
BstAPI	GCANNNNNTGC	1 cut(s)	1580
BstBAI	YACGTR	1 cut(s)	1001
BstBI	TTCGAA	1 cut(s)	1021
BstDEI	CTNAG	6 cut(s)	615, 867, 1195, 1496, 1669, 1869
BstDSI	CCRYGG	1 cut(s)	249
BstF5I	GGATG	7 cut(s)	198, 282, 502, 696, 829, 981, 1144
BstFNI	CGCG	1 cut(s)	570
BstHHI	GCGC	2 cut(s)	572, 1158
BstKTI	GATC	6 cut(s)	327, 829, 928, 1108, 1663, 1737
BstMAI	GTCTC	2 cut(s)	259, 1209
BstMBI	GATC	6 cut(s)	324, 826, 925, 1105, 1660, 1734
BstMWI	GCNNNNNNNGC	5 cut(s)	578, 946, 1580, 1615, 1874
BstNI	CCWGG	3 cut(s)	1136, 1418, 1699
BstSCI	CCNGG	9 cut(s)	421, 505, 685, 686, 709, 710, 1134, 1416, 1697
BstSFI	CTRYAG	2 cut(s)	903, 1467
BstUI	CGCG	1 cut(s)	570
BstV1I	GCAGC	4 cut(s)	471, 544, 1129, 1815
BstV2I	GAAGAC	1 cut(s)	1692
BstX2I	RGATCY	1 cut(s)	1734
BstXI	CCANNNNNNTGG	1 cut(s)	250
BstYI	RGATCY	1 cut(s)	1734
BsuRI	GGCC	3 cut(s)	581, 1609, 1712
BtgI	CCRYGG	1 cut(s)	249
BtrI	CACGTC	1 cut(s)	208
BtsCI	GGATG	7 cut(s)	198, 282, 502, 696, 829, 981, 1144
BtsIMutI	CAGTG	1 cut(s)	1540
BveI	ACCTGC	3 cut(s)	1486, 1565, 1793
CaiI	CAGNNNCTG	2 cut(s)	1495, 1790
CfoI	GCGC	2 cut(s)	572, 1158
Cfr13I	GGNCC	5 cut(s)	334, 397, 472, 1004, 1607
Cfr9I	CCCGGG	2 cut(s)	686, 710
Csp6I	GTAC	4 cut(s)	446, 807, 1397, 1527
CviQI	GTAC	4 cut(s)	446, 807, 1397, 1527
DdeI	CTNAG	6 cut(s)	615, 867, 1195, 1496, 1669, 1869
DpnI	GATC	6 cut(s)	326, 828, 927, 1107, 1662, 1736
DpnII	GATC	6 cut(s)	324, 826, 925, 1105, 1660, 1734
DraIII	CACNNNGTG	1 cut(s)	601
EaeI	YGGCCR	1 cut(s)	1710
Eam1104I	CTCTTC	2 cut(s)	1049, 1670
EarI	CTCTTC	2 cut(s)	1049, 1670
EciI	GGCGGA	6 cut(s)	191, 208, 250, 256, 268, 693
Eco130I	CCWWGG	2 cut(s)	249, 1226
Eco31I	GGTCTC	2 cut(s)	259, 1209
Eco32I	GATATC	1 cut(s)	876
Eco47I	GGWCC	4 cut(s)	334, 397, 472, 1004
Eco57I	CTGAAG	1 cut(s)	1109
Eco88I	CYCGRG	4 cut(s)	686, 710, 758, 1812
EcoRII	CCWGG	3 cut(s)	1134, 1416, 1697
EcoRV	GATATC	1 cut(s)	876
EcoT14I	CCWWGG	2 cut(s)	249, 1226
EcoT22I	ATGCAT	2 cut(s)	1050, 1638
ErhI	CCWWGG	2 cut(s)	249, 1226
FalI	AAGNNNNNCTT	4 cut(s)	638, 670, 1107, 1139
FauI	CCCGC	1 cut(s)	94
FauNDI	CATATG	2 cut(s)	1050, 1110
FbaI	TGATCA	1 cut(s)	826
FblI	GTMKAC	3 cut(s)	309, 417, 1559
Fnu4HI	GCNGC	7 cut(s)	346, 485, 558, 573, 748, 1143, 1829
FokI	GGATG	7 cut(s)	185, 269, 489, 703, 836, 988, 1151
Fsp4HI	GCNGC	7 cut(s)	346, 485, 558, 573, 748, 1143, 1829
FspBI	CTAG	3 cut(s)	183, 1014, 1319
GlaI	GCGC	2 cut(s)	571, 1157
GluI	GCNGC	7 cut(s)	346, 485, 558, 573, 748, 1143, 1829
GsaI	CCCAGC	1 cut(s)	363
GsuI	CTGGAG	3 cut(s)	929, 1118, 1584
HaeIII	GGCC	3 cut(s)	581, 1609, 1712
HapII	CCGG	5 cut(s)	423, 506, 687, 711, 1713
HhaI	GCGC	2 cut(s)	572, 1158
Hin6I	GCGC	2 cut(s)	570, 1156
HinP1I	GCGC	2 cut(s)	570, 1156
HincII	GTYRAC	2 cut(s)	310, 418
HindII	GTYRAC	2 cut(s)	310, 418
HinfI	GANTC	6 cut(s)	239, 378, 754, 1172, 1193, 1779
HpaII	CCGG	5 cut(s)	423, 506, 687, 711, 1713
HphI	GGTGA	5 cut(s)	130, 655, 737, 1175, 1764
Hpy166II	GTNNAC	5 cut(s)	310, 418, 853, 1166, 1560
Hpy188I	TCNGA	9 cut(s)	226, 523, 542, 639, 930, 1369, 1497, 1672, 1852
Hpy188III	TCNNGA	8 cut(s)	328, 734, 758, 821, 1190, 1510, 1730, 1871
Hpy8I	GTNNAC	5 cut(s)	310, 418, 853, 1166, 1560
Hpy99I	CGWCG	3 cut(s)	275, 311, 419
HpyAV	CCTTC	9 cut(s)	160, 325, 334, 508, 925, 1028, 1133, 1232, 1842
HpyCH4III	ACNGT	4 cut(s)	415, 1535, 1723, 1824
HpyCH4IV	ACGT	2 cut(s)	207, 1000
HpyF10VI	GCNNNNNNNGC	5 cut(s)	578, 946, 1580, 1615, 1874
HpyF3I	CTNAG	6 cut(s)	615, 867, 1195, 1496, 1669, 1869
HpySE526I	ACGT	2 cut(s)	207, 1000
HspAI	GCGC	2 cut(s)	570, 1156
Ksp22I	TGATCA	1 cut(s)	826
Kzo9I	GATC	6 cut(s)	324, 826, 925, 1105, 1660, 1734
LmnI	GCTCC	8 cut(s)	191, 360, 791, 1333, 1420, 1565, 1655, 1799
Lsp1109I	GCAGC	4 cut(s)	471, 544, 1129, 1815
LweI	GCATC	6 cut(s)	357, 527, 1129, 1239, 1293, 1777
MaeI	CTAG	3 cut(s)	183, 1014, 1319
MaeII	ACGT	2 cut(s)	207, 1000
MaeIII	GTNAC	1 cut(s)	208
MalI	GATC	6 cut(s)	326, 828, 927, 1107, 1662, 1736
MboI	GATC	6 cut(s)	324, 826, 925, 1105, 1660, 1734
MboII	GAAGA	4 cut(s)	1066, 1484, 1657, 1697
MflI	RGATCY	1 cut(s)	1734
MhlI	GDGCHC	5 cut(s)	357, 430, 588, 1570, 1585
MluCI	AATT	6 cut(s)	39, 244, 495, 1501, 1551, 1593
MlyI	GAGTC	3 cut(s)	372, 748, 1187
MmeI	TCCRAC	2 cut(s)	375, 520
Mph1103I	ATGCAT	2 cut(s)	1050, 1638
MseI	TTAA	5 cut(s)	845, 1028, 1211, 1245, 1505
MslI	CAYNNNNRTG	3 cut(s)	1049, 1247, 1844
MspA1I	CMGCKG	1 cut(s)	455
MspCI	CTTAAG	1 cut(s)	1027
MspI	CCGG	5 cut(s)	423, 506, 687, 711, 1713
MspR9I	CCNGG	9 cut(s)	423, 507, 687, 688, 711, 712, 1136, 1418, 1699
Mva1269I	GAATGC	2 cut(s)	384, 1636
MvaI	CCWGG	3 cut(s)	1136, 1418, 1699
MvnI	CGCG	1 cut(s)	570
MwoI	GCNNNNNNNGC	5 cut(s)	578, 946, 1580, 1615, 1874
NciI	CCSGG	6 cut(s)	423, 507, 687, 688, 711, 712
NcoI	CCATGG	1 cut(s)	249
NdeI	CATATG	2 cut(s)	1050, 1110
NdeII	GATC	6 cut(s)	324, 826, 925, 1105, 1660, 1734
NlaIV	GGNNCC	1 cut(s)	1657
NmuCI	GTSAC	1 cut(s)	208
NsiI	ATGCAT	2 cut(s)	1050, 1638
NspV	TTCGAA	1 cut(s)	1021
PaeR7I	CTCGAG	1 cut(s)	1812
PaqCI	CACCTGC	2 cut(s)	1565, 1793
PctI	GAATGC	2 cut(s)	384, 1636
PfeI	GAWTC	3 cut(s)	239, 1172, 1779
Pfl23II	CGTACG	1 cut(s)	1526
PflMI	CCANNNNNTGG	1 cut(s)	1577
PfoI	TCCNGGA	2 cut(s)	505, 1134
PkrI	GCNGC	7 cut(s)	347, 486, 559, 574, 749, 1144, 1830
PleI	GAGTC	3 cut(s)	372, 748, 1187
PpsI	GAGTC	3 cut(s)	372, 748, 1187
Ppu21I	YACGTR	1 cut(s)	1001
Psp6I	CCWGG	3 cut(s)	1134, 1416, 1697
PspFI	CCCAGC	1 cut(s)	359
PspGI	CCWGG	3 cut(s)	1134, 1416, 1697
PspLI	CGTACG	1 cut(s)	1526
PspN4I	GGNNCC	1 cut(s)	1657
PspPI	GGNCC	5 cut(s)	334, 397, 472, 1004, 1607
PspXI	VCTCGAGB	1 cut(s)	1812
PstNI	CAGNNNCTG	2 cut(s)	1495, 1790
PsuI	RGATCY	1 cut(s)	1734
PvuII	CAGCTG	1 cut(s)	455
RsaI	GTAC	4 cut(s)	447, 808, 1398, 1528
RsaNI	GTAC	4 cut(s)	446, 807, 1397, 1527
RseI	CAYNNNNRTG	3 cut(s)	1049, 1247, 1844
SalI	GTCGAC	2 cut(s)	308, 416
SaqAI	TTAA	5 cut(s)	845, 1028, 1211, 1245, 1505
SatI	GCNGC	7 cut(s)	346, 485, 558, 573, 748, 1143, 1829
Sau3AI	GATC	6 cut(s)	324, 826, 925, 1105, 1660, 1734
Sau96I	GGNCC	5 cut(s)	334, 397, 472, 1004, 1607
SchI	GAGTC	3 cut(s)	372, 748, 1187
ScrFI	CCNGG	9 cut(s)	423, 507, 687, 688, 711, 712, 1136, 1418, 1699
SduI	GDGCHC	5 cut(s)	357, 430, 588, 1570, 1585
SfaNI	GCATC	6 cut(s)	357, 527, 1129, 1239, 1293, 1777
SfcI	CTRYAG	2 cut(s)	903, 1467
Sfr274I	CTCGAG	1 cut(s)	1812
SfuI	TTCGAA	1 cut(s)	1021
SinI	GGWCC	4 cut(s)	334, 397, 472, 1004
SlaI	CTCGAG	1 cut(s)	1812
SmaI	CCCGGG	2 cut(s)	688, 712
SmiMI	CAYNNNNRTG	3 cut(s)	1049, 1247, 1844
SmlI	CTYRAG	2 cut(s)	1027, 1812
SmoI	CTYRAG	2 cut(s)	1027, 1812
Sse9I	AATT	6 cut(s)	39, 244, 495, 1501, 1551, 1593
SspMI	CTAG	3 cut(s)	183, 1014, 1319
StyD4I	CCNGG	9 cut(s)	421, 505, 685, 686, 709, 710, 1134, 1416, 1697
StyI	CCWWGG	2 cut(s)	249, 1226
TaaI	ACNGT	4 cut(s)	415, 1535, 1723, 1824
TaiI	ACGT	2 cut(s)	210, 1003
TaqI	TCGA	7 cut(s)	309, 327, 417, 1021, 1509, 1740, 1813
TaqII	GACCGA	2 cut(s)	489, 888
TasI	AATT	6 cut(s)	39, 244, 495, 1501, 1551, 1593
TauI	GCSGC	3 cut(s)	348, 575, 750
TfiI	GAWTC	3 cut(s)	239, 1172, 1779
Tru1I	TTAA	5 cut(s)	845, 1028, 1211, 1245, 1505
Tru9I	TTAA	5 cut(s)	845, 1028, 1211, 1245, 1505
TscAI	CASTG	1 cut(s)	1540
TseFI	GTSAC	1 cut(s)	208
TseI	GCWGC	4 cut(s)	484, 557, 1142, 1828
Tsp45I	GTSAC	1 cut(s)	208
TspDTI	ATGAA	5 cut(s)	304, 1067, 1127, 1229, 1455
TspGWI	ACGGA	2 cut(s)	1313, 1751
TspMI	CCCGGG	2 cut(s)	686, 710
TspRI	CASTG	1 cut(s)	1540
Van91I	CCANNNNNTGG	1 cut(s)	1577
Vha464I	CTTAAG	1 cut(s)	1027
VpaK11BI	GGWCC	4 cut(s)	334, 397, 472, 1004
XcmI	CCANNNNNNNNNTGG	1 cut(s)	598
XhoI	CTCGAG	1 cut(s)	1812
XmaI	CCCGGG	2 cut(s)	686, 710
XmiI	GTMKAC	3 cut(s)	309, 417, 1559
XspI	CTAG	3 cut(s)	183, 1014, 1319
Zsp2I	ATGCAT	2 cut(s)	1050, 1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.