Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000295.1

Orthogroup ID

OG0005687

Physical Location & Seq

Genomic Coordinates Forward (+)

63963 .. 67229

Gene Structure 3267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000295.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

atggccgtcttagctcagctggtagagcgcgtggcttttaaccacgtggtcgtgggttcgattcccacagacggcgtctttccctttatttttttttcgcttttaccgacgtcgtttggcttccagttgggcacgctgaaccgtctgtacttcatttccgttacatcctactcgaacggaaaaaaaaaaatcagtcgcatactctatcggcaaattgacttttatctccttccactcaactctcgtctctctgtgcctgaaaacttcctccctcctcctcccccaatgcttctctctgctgcaatcactcaccaacacccctcaaattccacttctaccctcctcctttcccctatttcccccaaactcccctccacctccctcaaaccccctcagcgacctcacctcctccccaacgcctccctccagaaccctaccccccaaaccatccgccacgtcacccacaccccctccgatgcggaccccgatgccaacaactccatggtcccctccgcctccgccgtcgcctccgccatccgccgagcctccacctcccccgtcgacttcatgcagaggatcgacaaggaccagaaaaacggcatcgttttgcccagctccgacttccagcgactctgcattcagcagctcgacctcttccgccgtatcgtccatcccgacgctctcctctcggtatatgtaagaccagccggtagttatgtgatggaccgattagagctgcgtagagtgacttgctatcccggcgtgaatgcatcagatattgtgattttagtcggcagttttagtgttgccaccggttttcgcgccgcagaggcagttctttccaatcacaaagtggaagttatagcggagtgtaaagctatggtttttcctatggtgaagcacccttttgtggtgggtttcctggttgctgagttacccaggatggaaatgccgtcaccggggagtgtcaggggtgaaggctgtgatttggttcactgccccactcctgaggaagcctatgcttcgcctcagggatccgatgccatatcttgggatgagtactctttggagaatgaaccggaacgaaaagcaatgttactccagcaatcatcgtggcagaataacgtaaggatgagcagtctagttgagcagattcgtggtcctctttctagcattcgaactttgagtaaaatgttgtccttgcatacaaagagaagtgagatttcttatgacattgttgaagatatactggtacaaggcgatcaagtgaaagatacccttcagcaactccaagatgctgtttacttgaccaaggctaatattatgcgctatagcgaacaagactctacatatgtatatcctgactcacggaggtctcaattattgaataacttgccaagtgatagttccagcattaagatgcaaatttctggtgaacaactttctctaaatgctccaaccaaagatatagagataccgatgccacctctagcccttgctcctttacagcaagatggaattagaccatgcaatgtttctgatatactggtagatttggtagaagctgtaagacctcttgcccataaccagcagcgtagagtagaactgagtgaacttggaaaatctttgcaagtagctgtagaagaacctgctttacgacaggctctgagcaatttaatcgaaagtgcattattgcgtacgcatgctgggggaaaggtagaaattgtgtctactggagctccagcaggtggtgctcttgtagtaattgatgacgatgggcctgacatgcattatatgacacagatgcattccctcgcaccctttggaactgatctcctctcagaaaatatggttgaagacaacatgacatggaattttgttgctgggctgactgttgctcgagagatactcgaaagttatggttgtgttgtccgtgtcatatcacctcggaatacagatgctccccttggagcaggtggaactcgagtcgaactctggcttccttctctcatggaattctccggtattgatggccctcttcaagatgcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009593 GO:0009987 GO:0010109 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019222 GO:0019538 GO:0031323 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0048037 GO:0048038 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051775 GO:0051776 GO:0060255 GO:0065007 GO:0071704 GO:0080005 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

No domains found.

Protein Analysis

683

Amino Acids

75.01

Weight (kDa)

5.59

Isoelectric Point (pI)

54.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005687)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67840 AT1G67840
fragaria_vesca	FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g35670
malus_domestica	MD13G1099700.v1.1
prunus_persica	Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1
pyrus_communis	pycom12g22130 pycom13g08710
rosa_chinensis	RchiOBHm_Chr4g0433151
rosa_laevigata	RLG00000006779
rosa_multiflora	Rmu_sc0020880.1_g000001 Rmu_ssc0000295.1_g000015
rosa_roxburghii	Rroxscaffold_5G00374630
rosa_rugosa	Rorug04G0266300 Rorug04G0266400
rosa_samantha	Rh4AG320100 Rh4BG328300 Rh4CG343700 Rh4DG323700
rosa_wichuraiana	Rw4G027790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1736, 1964
AatII	GACGTC	1 cut(s)	113
Acc36I	ACCTGC	3 cut(s)	1657, 1736, 1964
AccB7I	CCANNNNNTGG	2 cut(s)	1050, 1748
AccI	GTMKAC	2 cut(s)	561, 1730
AccII	CGCG	2 cut(s)	30, 822
AciI	CCGC	9 cut(s)	451, 479, 513, 519, 531, 538, 658, 825, 866
AclWI	GGATC	3 cut(s)	584, 1029, 1042
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	325, 1425, 1873, 2015
AcuI	CTGAAG	1 cut(s)	1265
AcvI	CACGTG	1 cut(s)	46
AcyI	GRCGYC	2 cut(s)	75, 110
AdeI	CACNNNGTG	1 cut(s)	853
AfaI	GTAC	4 cut(s)	149, 1061, 1254, 1699
AfiI	CCNNNNNNNGG	5 cut(s)	71, 910, 959, 1050, 1748
AgeI	ACCGGT	1 cut(s)	812
AgsI	TTSAA	4 cut(s)	1241, 1387, 1856, 2042
AjiI	CACGTC	1 cut(s)	457
AjnI	CCWGG	2 cut(s)	921, 938
AjuI	GAANNNNNNNTTGG	2 cut(s)	1390, 1422
AluBI	AGCT	9 cut(s)	14, 19, 615, 646, 736, 878, 1565, 1637, 1739
AluI	AGCT	9 cut(s)	14, 19, 615, 646, 736, 878, 1565, 1637, 1739
Alw21I	GWGCWC	2 cut(s)	1741, 1756
Alw26I	GTCTC	2 cut(s)	251, 1380
AlwI	GGATC	3 cut(s)	584, 1029, 1042
AlwNI	CAGNNNCTG	1 cut(s)	1666
Ama87I	CYCGRG	2 cut(s)	1899, 1983
AoxI	GGCC	3 cut(s)	3, 1778, 2032
ApeKI	GCWGC	4 cut(s)	299, 643, 736, 1591
ApoI	RAATTY	4 cut(s)	325, 1425, 1873, 2015
AsiGI	ACCGGT	1 cut(s)	812
AspLEI	GCGC	3 cut(s)	30, 824, 1329
AspS9I	GGNCC	7 cut(s)	481, 505, 586, 724, 1160, 1778, 2033
AsuC2I	CCSGG	2 cut(s)	759, 960
AsuHPI	GGTGA	8 cut(s)	302, 395, 451, 907, 948, 986, 1445, 1935
AsuII	TTCGAA	1 cut(s)	1177
AvaI	CYCGRG	2 cut(s)	1899, 1983
AvaII	GGWCC	5 cut(s)	481, 505, 586, 724, 1160
AxyI	CCTNAGG	2 cut(s)	1008, 1029
BaeGI	GKGCMC	1 cut(s)	134
BamHI	GGATCC	1 cut(s)	1034
BanII	GRGCYC	1 cut(s)	1741
BbrPI	CACGTG	1 cut(s)	46
BbsI	GAAGAC	1 cut(s)	1863
Bbv12I	GWGCWC	2 cut(s)	1741, 1756
BbvCI	CCTCAGC	1 cut(s)	393
BbvI	GCAGC	4 cut(s)	286, 655, 723, 1603
BccI	CCATC	8 cut(s)	455, 542, 678, 715, 937, 1508, 1769, 2024
BceAI	ACGGC	5 cut(s)	88, 506, 613, 645, 937
BcgI	CGANNNNNNTGC	2 cut(s)	1660, 1694
BciT130I	CCWGG	2 cut(s)	923, 940
BcnI	CCSGG	2 cut(s)	759, 960
BcoDI	GTCTC	2 cut(s)	251, 1380
BfaI	CTAG	3 cut(s)	1142, 1170, 1490
BfmI	CTRYAG	2 cut(s)	1330, 1638
BfuAI	ACCTGC	3 cut(s)	1657, 1736, 1964
BglI	GCCNNNNNGGC	1 cut(s)	830
BisI	GCNGC	5 cut(s)	300, 644, 737, 825, 1592
BlpI	GCTNAGC	1 cut(s)	15
BlsI	GCNGC	5 cut(s)	301, 645, 738, 826, 1593
BmcAI	AGTACT	1 cut(s)	1061
Bme1390I	CCNGG	4 cut(s)	759, 923, 940, 960
Bme18I	GGWCC	5 cut(s)	481, 505, 586, 724, 1160
BmeT110I	CYCGRG	2 cut(s)	1899, 1983
BmgBI	CACGTC	1 cut(s)	457
BmgT120I	GGNCC	7 cut(s)	481, 505, 586, 724, 1160, 1778, 2033
BmiI	GGNNCC	3 cut(s)	483, 507, 1036
BmrFI	CCNGG	4 cut(s)	759, 923, 940, 960
BpiI	GAAGAC	1 cut(s)	1863
BplI	GAGNNNNNCTC	4 cut(s)	1893, 1925, 1977, 2009
BpmI	CTGGAG	4 cut(s)	410, 1085, 1725, 1755
Bpu10I	CCTNAGC	1 cut(s)	393
Bpu1102I	GCTNAGC	1 cut(s)	15
Bpu14I	TTCGAA	1 cut(s)	1177
BpuMI	CCSGG	2 cut(s)	759, 960
BsaAI	YACGTR	1 cut(s)	46
BsaHI	GRCGYC	2 cut(s)	75, 110
BsaI	GGTCTC	1 cut(s)	1380
BsaJI	CCNNGG	6 cut(s)	501, 938, 959, 1311, 1946, 1966
BsaWI	WCCGGW	3 cut(s)	812, 1078, 2021
BsaXI	ACNNNNNCTCC	8 cut(s)	390, 420, 455, 485, 1723, 1753, 1945, 1975
Bsc4I	CCNNNNNNNGG	5 cut(s)	71, 910, 959, 1050, 1748
Bse118I	RCCGGY	2 cut(s)	707, 812
Bse1I	ACTGG	4 cut(s)	124, 1254, 1551, 1738
Bse21I	CCTNAGG	2 cut(s)	1008, 1029
Bse3DI	GCAATG	2 cut(s)	1098, 1537
BseBI	CCWGG	2 cut(s)	923, 940
BseDI	CCNNGG	6 cut(s)	501, 938, 959, 1311, 1946, 1966
BseGI	GGATG	7 cut(s)	164, 447, 534, 670, 948, 1060, 1137
BseLI	CCNNNNNNNGG	5 cut(s)	71, 910, 959, 1050, 1748
BseMI	GCAATG	2 cut(s)	1098, 1537
BseMII	CTCAG	8 cut(s)	29, 407, 921, 999, 1043, 1598, 1658, 1854
BseNI	ACTGG	4 cut(s)	124, 1254, 1551, 1738
BseRI	GAGGAG	6 cut(s)	264, 267, 332, 398, 674, 1826
BseSI	GKGCMC	1 cut(s)	134
BseXI	GCAGC	4 cut(s)	286, 655, 723, 1603
BseYI	CCCAGC	3 cut(s)	611, 1706, 1883
Bsh1236I	CGCG	2 cut(s)	30, 822
BshFI	GGCC	3 cut(s)	5, 1780, 2034
BshTI	ACCGGT	1 cut(s)	812
BsiHKAI	GWGCWC	2 cut(s)	1741, 1756
BsiHKCI	CYCGRG	2 cut(s)	1899, 1983
BsiSI	CCGG	6 cut(s)	708, 759, 813, 959, 1079, 2022
BsiWI	CGTACG	1 cut(s)	1697
BslFI	GGGAC	1 cut(s)	491
BslI	CCNNNNNNNGG	5 cut(s)	71, 910, 959, 1050, 1748
BsmAI	GTCTC	2 cut(s)	251, 1380
BsmBI	CGTCTC	1 cut(s)	251
BsmFI	GGGAC	1 cut(s)	491
BsmI	GAATGC	4 cut(s)	636, 772, 1173, 1807
BsnI	GGCC	3 cut(s)	5, 1780, 2034
Bso31I	GGTCTC	1 cut(s)	1380
BsoBI	CYCGRG	2 cut(s)	1899, 1983
Bsp119I	TTCGAA	1 cut(s)	1177
Bsp1286I	GDGCHC	3 cut(s)	134, 1741, 1756
Bsp143I	GATC	4 cut(s)	576, 1034, 1261, 1831
Bsp1720I	GCTNAGC	1 cut(s)	15
Bsp19I	CCATGG	1 cut(s)	501
BspACI	CCGC	9 cut(s)	451, 479, 513, 519, 531, 538, 658, 825, 866
BspANI	GGCC	3 cut(s)	5, 1780, 2034
BspCNI	CTCAG	8 cut(s)	28, 406, 922, 1000, 1042, 1599, 1659, 1853
BspFNI	CGCG	2 cut(s)	30, 822
BspLI	GGNNCC	3 cut(s)	483, 507, 1036
BspMI	ACCTGC	3 cut(s)	1657, 1736, 1964
BspPI	GGATC	3 cut(s)	584, 1029, 1042
BspT104I	TTCGAA	1 cut(s)	1177
BspTNI	GGTCTC	1 cut(s)	1380
BsrDI	GCAATG	2 cut(s)	1098, 1537
BsrFI	RCCGGY	2 cut(s)	707, 812
BsrI	ACTGG	4 cut(s)	124, 1254, 1551, 1738
BssAI	RCCGGY	2 cut(s)	707, 812
BssECI	CCNNGG	6 cut(s)	501, 938, 959, 1311, 1946, 1966
BssMI	GATC	4 cut(s)	576, 1034, 1261, 1831
BssNI	GRCGYC	2 cut(s)	75, 110
BssT1I	CCWWGG	3 cut(s)	501, 1311, 1966
Bst2UI	CCWGG	2 cut(s)	923, 940
Bst4CI	ACNGT	2 cut(s)	143, 1894
Bst6I	CTCTTC	2 cut(s)	659, 2043
BstACI	GRCGYC	2 cut(s)	75, 110
BstAPI	GCANNNNNTGC	1 cut(s)	1751
BstBAI	YACGTR	1 cut(s)	46
BstBI	TTCGAA	1 cut(s)	1177
BstC8I	GCNNGC	2 cut(s)	134, 1704
BstDEI	CTNAG	9 cut(s)	10, 15, 393, 930, 1008, 1029, 1607, 1667, 1840
BstDSI	CCRYGG	1 cut(s)	501
BstF5I	GGATG	7 cut(s)	164, 447, 534, 670, 948, 1060, 1137
BstFNI	CGCG	2 cut(s)	30, 822
BstHHI	GCGC	3 cut(s)	30, 824, 1329
BstKTI	GATC	4 cut(s)	579, 1037, 1264, 1834
BstMAI	GTCTC	2 cut(s)	251, 1380
BstMBI	GATC	4 cut(s)	576, 1034, 1261, 1831
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 25, 759, 830, 1751, 1786
BstNI	CCWGG	2 cut(s)	923, 940
BstNSI	RCATGY	2 cut(s)	1706, 1789
BstSCI	CCNGG	4 cut(s)	757, 921, 938, 958
BstSFI	CTRYAG	2 cut(s)	1330, 1638
BstSLI	GKGCMC	1 cut(s)	134
BstUI	CGCG	2 cut(s)	30, 822
BstV1I	GCAGC	4 cut(s)	286, 655, 723, 1603
BstV2I	GAAGAC	1 cut(s)	1863
BstX2I	RGATCY	1 cut(s)	1034
BstYI	RGATCY	1 cut(s)	1034
Bsu36I	CCTNAGG	2 cut(s)	1008, 1029
BsuRI	GGCC	3 cut(s)	5, 1780, 2034
BtgI	CCRYGG	1 cut(s)	501
BtrI	CACGTC	1 cut(s)	457
BtsCI	GGATG	7 cut(s)	164, 447, 534, 670, 948, 1060, 1137
BtsI	GCAGTG	1 cut(s)	994
BtsIMutI	CAGTG	1 cut(s)	994
BveI	ACCTGC	3 cut(s)	1657, 1736, 1964
Cac8I	GCNNGC	2 cut(s)	134, 1704
CaiI	CAGNNNCTG	1 cut(s)	1666
CfoI	GCGC	3 cut(s)	30, 824, 1329
Cfr10I	RCCGGY	2 cut(s)	707, 812
Cfr13I	GGNCC	7 cut(s)	481, 505, 586, 724, 1160, 1778, 2033
CseI	GACGC	2 cut(s)	64, 686
Csp6I	GTAC	4 cut(s)	148, 1060, 1253, 1698
CspAI	ACCGGT	1 cut(s)	812
CspCI	CAANNNNNGTGG	2 cut(s)	1094, 1129
CviAII	CATG	8 cut(s)	502, 568, 1527, 1703, 1786, 1864, 1869, 2011
CviQI	GTAC	4 cut(s)	148, 1060, 1253, 1698
DdeI	CTNAG	9 cut(s)	10, 15, 393, 930, 1008, 1029, 1607, 1667, 1840
DpnI	GATC	4 cut(s)	578, 1036, 1263, 1833
DpnII	GATC	4 cut(s)	576, 1034, 1261, 1831
DraIII	CACNNNGTG	1 cut(s)	853
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	659, 2043
EarI	CTCTTC	2 cut(s)	659, 2043
EciI	GGCGGA	6 cut(s)	440, 502, 508, 520, 527, 647
Ecl136II	GAGCTC	1 cut(s)	1739
Eco130I	CCWWGG	3 cut(s)	501, 1311, 1966
Eco24I	GRGCYC	1 cut(s)	1741
Eco31I	GGTCTC	1 cut(s)	1380
Eco47I	GGWCC	5 cut(s)	481, 505, 586, 724, 1160
Eco53kI	GAGCTC	1 cut(s)	1739
Eco57I	CTGAAG	1 cut(s)	1265
Eco72I	CACGTG	1 cut(s)	46
Eco81I	CCTNAGG	2 cut(s)	1008, 1029
Eco88I	CYCGRG	2 cut(s)	1899, 1983
EcoICRI	GAGCTC	1 cut(s)	1739
EcoRI	GAATTC	1 cut(s)	2015
EcoRII	CCWGG	2 cut(s)	921, 938
EcoT14I	CCWWGG	3 cut(s)	501, 1311, 1966
EcoT22I	ATGCAT	4 cut(s)	772, 1791, 1809, 2050
EcoT38I	GRGCYC	1 cut(s)	1741
ErhI	CCWWGG	3 cut(s)	501, 1311, 1966
Esp3I	CGTCTC	1 cut(s)	251
FaeI	CATG	8 cut(s)	505, 571, 1530, 1706, 1789, 1867, 1872, 2014
FalI	AAGNNNNNCTT	2 cut(s)	1263, 1295
FaqI	GGGAC	1 cut(s)	491
FatI	CATG	8 cut(s)	501, 567, 1526, 1702, 1785, 1863, 1868, 2010
FauNDI	CATATG	1 cut(s)	1351
FblI	GTMKAC	2 cut(s)	561, 1730
Fnu4HI	GCNGC	5 cut(s)	300, 644, 737, 825, 1592
FokI	GGATG	7 cut(s)	151, 434, 521, 657, 955, 1067, 1144
FriOI	GRGCYC	1 cut(s)	1741
Fsp4HI	GCNGC	5 cut(s)	300, 644, 737, 825, 1592
FspBI	CTAG	3 cut(s)	1142, 1170, 1490
GlaI	GCGC	3 cut(s)	29, 823, 1328
GluI	GCNGC	5 cut(s)	300, 644, 737, 825, 1592
GsaI	CCCAGC	3 cut(s)	615, 1710, 1887
GsuI	CTGGAG	4 cut(s)	410, 1085, 1725, 1755
HaeIII	GGCC	3 cut(s)	5, 1780, 2034
HapII	CCGG	6 cut(s)	708, 759, 813, 959, 1079, 2022
HgaI	GACGC	2 cut(s)	64, 686
HhaI	GCGC	3 cut(s)	30, 824, 1329
Hin1I	GRCGYC	2 cut(s)	75, 110
Hin1II	CATG	8 cut(s)	505, 571, 1530, 1706, 1789, 1867, 1872, 2014
Hin6I	GCGC	3 cut(s)	28, 822, 1327
HinP1I	GCGC	3 cut(s)	28, 822, 1327
HincII	GTYRAC	1 cut(s)	562
HindII	GTYRAC	1 cut(s)	562
HinfI	GANTC	6 cut(s)	61, 630, 1153, 1343, 1364, 1986
HpaII	CCGG	6 cut(s)	708, 759, 813, 959, 1079, 2022
HphI	GGTGA	8 cut(s)	302, 395, 451, 907, 948, 986, 1445, 1935
Hpy166II	GTNNAC	6 cut(s)	562, 994, 1303, 1436, 1613, 1731
Hpy188I	TCNGA	8 cut(s)	475, 619, 775, 1039, 1540, 1668, 1843, 1950
Hpy188III	TCNNGA	6 cut(s)	427, 674, 1007, 1361, 1901, 2042
Hpy8I	GTNNAC	6 cut(s)	562, 994, 1303, 1436, 1613, 1731
Hpy99I	CGWCG	5 cut(s)	112, 115, 527, 563, 680
HpyAV	CCTTC	4 cut(s)	239, 971, 1289, 2013
HpyCH4III	ACNGT	2 cut(s)	143, 1894
HpyCH4IV	ACGT	4 cut(s)	45, 110, 456, 1125
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 25, 759, 830, 1751, 1786
HpyF3I	CTNAG	9 cut(s)	10, 15, 393, 930, 1008, 1029, 1607, 1667, 1840
HpySE526I	ACGT	4 cut(s)	45, 110, 456, 1125
Hsp92I	GRCGYC	2 cut(s)	75, 110
Hsp92II	CATG	8 cut(s)	505, 571, 1530, 1706, 1789, 1867, 1872, 2014
HspAI	GCGC	3 cut(s)	28, 822, 1327
Kzo9I	GATC	4 cut(s)	576, 1034, 1261, 1831
LmnI	GCTCC	7 cut(s)	620, 1459, 1504, 1736, 1744, 1966, 1970
Lsp1109I	GCAGC	4 cut(s)	286, 655, 723, 1603
MaeI	CTAG	3 cut(s)	1142, 1170, 1490
MaeII	ACGT	4 cut(s)	45, 110, 456, 1125
MaeIII	GTNAC	6 cut(s)	160, 457, 745, 933, 954, 1095
MalI	GATC	4 cut(s)	578, 1036, 1263, 1833
MboI	GATC	4 cut(s)	576, 1034, 1261, 1831
MboII	GAAGA	5 cut(s)	646, 1253, 1655, 1868, 2030
MflI	RGATCY	1 cut(s)	1034
MhlI	GDGCHC	3 cut(s)	134, 1741, 1756
MlyI	GAGTC	4 cut(s)	624, 1337, 1358, 1995
MmeI	TCCRAC	2 cut(s)	642, 1481
Mph1103I	ATGCAT	4 cut(s)	772, 1791, 1809, 2050
MseI	TTAA	3 cut(s)	39, 1416, 1676
MslI	CAYNNNNRTG	1 cut(s)	1418
MspA1I	CMGCKG	1 cut(s)	19
MspI	CCGG	6 cut(s)	708, 759, 813, 959, 1079, 2022
MspR9I	CCNGG	4 cut(s)	759, 923, 940, 960
Mva1269I	GAATGC	4 cut(s)	636, 772, 1173, 1807
MvaI	CCWGG	2 cut(s)	923, 940
MvnI	CGCG	2 cut(s)	30, 822
MwoI	GCNNNNNNNGC	6 cut(s)	11, 25, 759, 830, 1751, 1786
NciI	CCSGG	2 cut(s)	759, 960
NcoI	CCATGG	1 cut(s)	501
NdeI	CATATG	1 cut(s)	1351
NdeII	GATC	4 cut(s)	576, 1034, 1261, 1831
NlaIII	CATG	8 cut(s)	505, 571, 1530, 1706, 1789, 1867, 1872, 2014
NlaIV	GGNNCC	3 cut(s)	483, 507, 1036
NmeAIII	GCCGAG	1 cut(s)	566
NmuCI	GTSAC	3 cut(s)	457, 745, 954
NsiI	ATGCAT	4 cut(s)	772, 1791, 1809, 2050
NspI	RCATGY	2 cut(s)	1706, 1789
NspV	TTCGAA	1 cut(s)	1177
PaeI	GCATGC	1 cut(s)	1706
PaeR7I	CTCGAG	2 cut(s)	1899, 1983
PaqCI	CACCTGC	2 cut(s)	1736, 1964
PcsI	WCGNNNNNNNCGW	2 cut(s)	104, 672
PctI	GAATGC	4 cut(s)	636, 772, 1173, 1807
PfeI	GAWTC	2 cut(s)	61, 1153
Pfl23II	CGTACG	1 cut(s)	1697
PflFI	GACNNNGTC	1 cut(s)	74
PflMI	CCANNNNNTGG	2 cut(s)	1050, 1748
PinAI	ACCGGT	1 cut(s)	812
PkrI	GCNGC	5 cut(s)	301, 645, 738, 826, 1593
PleI	GAGTC	4 cut(s)	624, 1337, 1358, 1994
PmaCI	CACGTG	1 cut(s)	46
PmlI	CACGTG	1 cut(s)	46
PpsI	GAGTC	4 cut(s)	624, 1337, 1358, 1994
Ppu21I	YACGTR	1 cut(s)	46
Psp124BI	GAGCTC	1 cut(s)	1741
Psp6I	CCWGG	2 cut(s)	921, 938
PspCI	CACGTG	1 cut(s)	46
PspFI	CCCAGC	3 cut(s)	611, 1706, 1883
PspGI	CCWGG	2 cut(s)	921, 938
PspLI	CGTACG	1 cut(s)	1697
PspN4I	GGNNCC	3 cut(s)	483, 507, 1036
PspPI	GGNCC	7 cut(s)	481, 505, 586, 724, 1160, 1778, 2033
PspXI	VCTCGAGB	1 cut(s)	1983
PsrI	GAACNNNNNNTAC	4 cut(s)	131, 163, 1638, 1670
PstNI	CAGNNNCTG	1 cut(s)	1666
PsuI	RGATCY	1 cut(s)	1034
PsyI	GACNNNGTC	1 cut(s)	74
PvuII	CAGCTG	1 cut(s)	19
RsaI	GTAC	4 cut(s)	149, 1061, 1254, 1699
RsaNI	GTAC	4 cut(s)	148, 1060, 1253, 1698
RseI	CAYNNNNRTG	1 cut(s)	1418
SacI	GAGCTC	1 cut(s)	1741
SalI	GTCGAC	1 cut(s)	560
SaqAI	TTAA	3 cut(s)	39, 1416, 1676
SatI	GCNGC	5 cut(s)	300, 644, 737, 825, 1592
Sau3AI	GATC	4 cut(s)	576, 1034, 1261, 1831
Sau96I	GGNCC	7 cut(s)	481, 505, 586, 724, 1160, 1778, 2033
ScaI	AGTACT	1 cut(s)	1061
SchI	GAGTC	4 cut(s)	624, 1337, 1358, 1995
ScrFI	CCNGG	4 cut(s)	759, 923, 940, 960
SduI	GDGCHC	3 cut(s)	134, 1741, 1756
SfcI	CTRYAG	2 cut(s)	1330, 1638
Sfr274I	CTCGAG	2 cut(s)	1899, 1983
SfuI	TTCGAA	1 cut(s)	1177
SinI	GGWCC	5 cut(s)	481, 505, 586, 724, 1160
SlaI	CTCGAG	2 cut(s)	1899, 1983
SmiMI	CAYNNNNRTG	1 cut(s)	1418
SmlI	CTYRAG	2 cut(s)	1899, 1983
SmoI	CTYRAG	2 cut(s)	1899, 1983
SphI	GCATGC	1 cut(s)	1706
SsiI	CCGC	9 cut(s)	451, 479, 513, 519, 531, 538, 658, 825, 866
SspI	AATATT	1 cut(s)	1321
SspMI	CTAG	3 cut(s)	1142, 1170, 1490
SstI	GAGCTC	1 cut(s)	1741
StyD4I	CCNGG	4 cut(s)	757, 921, 938, 958
StyI	CCWWGG	3 cut(s)	501, 1311, 1966
TaaI	ACNGT	2 cut(s)	143, 1894
TaiI	ACGT	4 cut(s)	48, 113, 459, 1128
TaqII	GACCGA	1 cut(s)	741
TatI	WGTACW	2 cut(s)	147, 1059
TauI	GCSGC	1 cut(s)	827
TfiI	GAWTC	2 cut(s)	61, 1153
Tru1I	TTAA	3 cut(s)	39, 1416, 1676
Tru9I	TTAA	3 cut(s)	39, 1416, 1676
TscAI	CASTG	1 cut(s)	1001
TseFI	GTSAC	3 cut(s)	457, 745, 954
TseI	GCWGC	4 cut(s)	299, 643, 736, 1591
Tsp45I	GTSAC	3 cut(s)	457, 745, 954
TspDTI	ATGAA	3 cut(s)	142, 556, 1089
TspGWI	ACGGA	4 cut(s)	148, 192, 1384, 1922
TspRI	CASTG	1 cut(s)	1001
Tth111I	GACNNNGTC	1 cut(s)	74
Van91I	CCANNNNNTGG	2 cut(s)	1050, 1748
VpaK11BI	GGWCC	5 cut(s)	481, 505, 586, 724, 1160
XapI	RAATTY	4 cut(s)	325, 1425, 1873, 2015
XceI	RCATGY	2 cut(s)	1706, 1789
XcmI	CCANNNNNNNNNTGG	2 cut(s)	499, 850
XhoI	CTCGAG	2 cut(s)	1899, 1983
XmiI	GTMKAC	2 cut(s)	561, 1730
XspI	CTAG	3 cut(s)	1142, 1170, 1490
ZraI	GACGTC	1 cut(s)	111
ZrmI	AGTACT	1 cut(s)	1061
Zsp2I	ATGCAT	4 cut(s)	772, 1791, 1809, 2050

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.