Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005687

Physical Location & Seq

Genomic Coordinates Reverse (-)

57341446 .. 57344863

Gene Structure 3418 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40168

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGCTTCTCTCTGCTGCAATCACTCACCAACACCCCTCAAATTCCACTTCTACCCTCCTCCTTTCCCCTATTTCCCCCAAACTCCCCTCCACCTCCCTCAAACCCCCTCAGCGACCTCACCTCCTCCCCAACGCCTCCCTCCAGAACCCTACCCCCCAAACCATCCGCCACGTCACCCACACCCCCTCCGATGCCGACCCCGAAGCCAACAACTCCATGGTCCCCTCCGCCTCCGCTGTCGCCTCCGCCATCCGCCGAGCCTCCACCTCCCCCGTCGACTTCATGCAGAGGATCGACAAGGACCAGAAAAACGGCATCGTTTTGCCCAGCTCCGACTTCCAGCGACTCTGCATTCAGCAGCTCGACCTCTTCCGCCGTATCGTCCATCCCGACGCTCTCCTCTCGGTATATGTAAGACCAGCTGGTAGCTATGTGATGGACCGATTAGAGCTGCGTAGAGTGACTTGCTATCCCGGCGTGAATGCATCAGATATTGTGATTTTAGTTGGCAGTTTTAGTGTTGCCACCGGTTTTCGCGCCGCAGAGGCAGTTCTTTCCAATCACAAAGTGGAAGTTATAGCGGAGTGTAAAGCTATGGTTTTTCCTATGGTGAAGCACCCTTTTGTGGTGGGGTTCTTGGTTGCTGAGTTACCCAGGATGGAAATGCCGTCACCGGGGAGTGTCCTGGGTGAAGGCTGTGATTTGGTTCACTGCCCCACTCCTGAGGAAGCCTATGCTTCGCCTCAGGGATCCGATGCCATATCTTGGGATGAGTACTCTTTGGAGAATGAACCGGAACGAGTAGTGACAATGTACAAGTTTAGTGCGGAGCAGAGATCAATTGCTATCAACATTTCTCGGTCTTTAGCTATGGCATATGTTATGGATCAGAAAGCAACGTTACTCCAGCAATCATCGTGGCAGAATAACGTAAGGATGAGCAGTCTAGTTGAGCAGATTCGTGGTCCTCTTTCTAGCATTCGCACTTTGAGTAAAATGTTGTCCATGCATACAAAGAGAAGTGAGATTTCTTATGACATTGTTGAAGATATACTGGTACAAGGCGATCAAGTGAAAGATACCCTTCAGCAACTCCAAGATGCTGCTAATATTATGCGCTATAGCGAACAAGACTCTACATATGTATATCCTGACGCACGGAGGTCTCAATTATTGAATAACTTGCCCAGTGATAGTTCCAGCATTAAGATGCAAATTTCTGGTGAACAACTTTCTCTAAATGCTCCAACCAAAGATATAGAGATACCGATGCCACCTCTAGCCCTTGCTCCTTTACGGCAAGATGGAATTAGACCATGCAATGTTTCTGATATACTGGTAGATTTGGTAGAAGCTGTAAGACCTCTTGCCCATAACCAGCAGCGTAGAGTAGAACTGAGTGAACTTGGAAAATCTTTGCAAGTAGCTGTAGAAGAACCTGCTTTACGACAGGCTCTGAGCAATTTAATCGAAAGTGCATTATTGCGTACGCATGCTGGGGGAAAGGTAGAAATTGTGTCTACTGAAGCTCCAGCAGGTGGTGCTTTTGTAGTAATTGATGACGATGGGCCTGACATGCATTATATGACACAGATGCATTCCCTCGCACCCTTTGGAACTGATCTCCTCTCAGAAAATATGGTTGAAGACAACATGACATGGAACTTTGTTGCTGGGCTGACTGTTGCCCGCGAGATACTCGAAAGTTATGGTTGTGTAGTCCGTGTCATATCACCCCGGAATAAAGATGCTGCCCTTGGAGCAGGTGGAACTCGAGTTGAAATCTGGCTTCCTTCTCTCATGGAATTCTCTGGTATTGATGGCCCTCTTCAGGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009593 GO:0009987 GO:0010109 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019222 GO:0019538 GO:0031323 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0048037 GO:0048038 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051775 GO:0051776 GO:0060255 GO:0065007 GO:0071704 GO:0080005 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

No domains found.

Protein Analysis

613

Amino Acids

67.25

Weight (kDa)

5.25

Isoelectric Point (pI)

60.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	479 - 598	1.8e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005687)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67840 AT1G67840
fragaria_vesca	FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g35670
malus_domestica	MD13G1099700.v1.1
prunus_persica	Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1
pyrus_communis	pycom12g22130 pycom13g08710
rosa_chinensis	RchiOBHm_Chr4g0433151
rosa_laevigata	RLG00000006779
rosa_multiflora	Rmu_sc0020880.1_g000001 Rmu_ssc0000295.1_g000015
rosa_roxburghii	Rroxscaffold_5G00374630
rosa_rugosa	Rorug04G0266300 Rorug04G0266400
rosa_samantha	Rh4AG320100 Rh4BG328300 Rh4CG343700 Rh4DG323700
rosa_wichuraiana	Rw4G027790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1526, 1754
Acc36I	ACCTGC	3 cut(s)	1447, 1526, 1754
AccB7I	CCANNNNNTGG	2 cut(s)	765, 1538
AccI	GTMKAC	2 cut(s)	276, 1520
AccII	CGCG	2 cut(s)	537, 1692
AclI	AACGTT	1 cut(s)	899
AclWI	GGATC	4 cut(s)	299, 744, 757, 894
AcsI	RAATTY	3 cut(s)	40, 1215, 1805
AcuI	CTGAAG	3 cut(s)	1070, 1545, 1814
AdeI	CACNNNGTG	1 cut(s)	568
AfaI	GTAC	4 cut(s)	776, 815, 1059, 1489
AfiI	CCNNNNNNNGG	5 cut(s)	625, 674, 765, 1538, 1831
AgeI	ACCGGT	1 cut(s)	527
AgsI	TTSAA	4 cut(s)	1046, 1177, 1646, 1781
AjiI	CACGTC	1 cut(s)	172
AjnI	CCWGG	2 cut(s)	653, 684
Alw26I	GTCTC	1 cut(s)	1170
AlwI	GGATC	4 cut(s)	299, 744, 757, 894
AlwNI	CAGNNNCTG	1 cut(s)	1456
Ama87I	CYCGRG	1 cut(s)	1773
AoxI	GGCC	2 cut(s)	1568, 1822
ApeKI	GCWGC	6 cut(s)	14, 358, 451, 1103, 1381, 1751
ApoI	RAATTY	3 cut(s)	40, 1215, 1805
AsiGI	ACCGGT	1 cut(s)	527
AspLEI	GCGC	2 cut(s)	539, 1119
AspS9I	GGNCC	6 cut(s)	220, 301, 439, 965, 1568, 1823
AsuC2I	CCSGG	3 cut(s)	474, 675, 1738
AsuHPI	GGTGA	8 cut(s)	17, 110, 166, 622, 663, 701, 1235, 1725
AvaI	CYCGRG	1 cut(s)	1773
AvaII	GGWCC	4 cut(s)	220, 301, 439, 965
AxyI	CCTNAGG	2 cut(s)	723, 744
BamHI	GGATCC	1 cut(s)	749
BbsI	GAAGAC	1 cut(s)	1653
BbvCI	CCTCAGC	1 cut(s)	108
BbvI	GCAGC	5 cut(s)	370, 438, 1090, 1393, 1738
BccI	CCATC	8 cut(s)	170, 257, 393, 430, 652, 1298, 1559, 1814
BceAI	ACGGC	4 cut(s)	328, 360, 652, 1313
BcgI	CGANNNNNNTGC	2 cut(s)	1450, 1484
BciT130I	CCWGG	2 cut(s)	655, 686
BcnI	CCSGG	3 cut(s)	474, 675, 1738
BcoDI	GTCTC	1 cut(s)	1170
BfaI	CTAG	3 cut(s)	947, 975, 1280
BfmI	CTRYAG	2 cut(s)	1120, 1428
BfuAI	ACCTGC	3 cut(s)	1447, 1526, 1754
BglI	GCCNNNNNGGC	1 cut(s)	545
BisI	GCNGC	7 cut(s)	15, 359, 452, 540, 1104, 1382, 1752
BlsI	GCNGC	7 cut(s)	16, 360, 453, 541, 1105, 1383, 1753
BmcAI	AGTACT	1 cut(s)	776
Bme1390I	CCNGG	5 cut(s)	474, 655, 675, 686, 1738
Bme18I	GGWCC	4 cut(s)	220, 301, 439, 965
BmeT110I	CYCGRG	1 cut(s)	1773
BmgBI	CACGTC	1 cut(s)	172
BmgT120I	GGNCC	6 cut(s)	220, 301, 439, 965, 1568, 1823
BmiI	GGNNCC	2 cut(s)	222, 751
BmrFI	CCNGG	5 cut(s)	474, 655, 675, 686, 1738
BmrI	ACTGGG	1 cut(s)	1182
BmsI	GCATC	9 cut(s)	181, 324, 494, 745, 1090, 1200, 1260, 1584, 1738
BmuI	ACTGGG	1 cut(s)	1182
BpiI	GAAGAC	1 cut(s)	1653
BpmI	CTGGAG	3 cut(s)	125, 890, 1515
Bpu10I	CCTNAGC	1 cut(s)	108
BpuMI	CCSGG	3 cut(s)	474, 675, 1738
BsaI	GGTCTC	1 cut(s)	1170
BsaJI	CCNNGG	6 cut(s)	216, 653, 674, 685, 1736, 1756
BsaWI	WCCGGW	2 cut(s)	527, 793
BsaXI	ACNNNNNCTCC	6 cut(s)	105, 135, 170, 200, 1513, 1543
Bsc4I	CCNNNNNNNGG	5 cut(s)	625, 674, 765, 1538, 1831
Bse118I	RCCGGY	1 cut(s)	527
Bse1I	ACTGG	3 cut(s)	1059, 1188, 1341
Bse21I	CCTNAGG	2 cut(s)	723, 744
Bse3DI	GCAATG	1 cut(s)	1327
BseBI	CCWGG	2 cut(s)	655, 686
BseDI	CCNNGG	6 cut(s)	216, 653, 674, 685, 1736, 1756
BseGI	GGATG	7 cut(s)	162, 249, 385, 663, 775, 942, 1840
BseLI	CCNNNNNNNGG	5 cut(s)	625, 674, 765, 1538, 1831
BseMI	GCAATG	1 cut(s)	1327
BseMII	CTCAG	7 cut(s)	122, 636, 714, 758, 1388, 1448, 1644
BseNI	ACTGG	3 cut(s)	1059, 1188, 1341
BseRI	GAGGAG	4 cut(s)	47, 113, 389, 1616
BseXI	GCAGC	5 cut(s)	370, 438, 1090, 1393, 1738
BseYI	CCCAGC	3 cut(s)	326, 1496, 1673
Bsh1236I	CGCG	2 cut(s)	537, 1692
BshFI	GGCC	2 cut(s)	1570, 1824
BshTI	ACCGGT	1 cut(s)	527
BsiHKCI	CYCGRG	1 cut(s)	1773
BsiSI	CCGG	5 cut(s)	474, 528, 674, 794, 1738
BsiWI	CGTACG	1 cut(s)	1487
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	5 cut(s)	625, 674, 765, 1538, 1831
BsmAI	GTCTC	1 cut(s)	1170
BsmFI	GGGAC	1 cut(s)	206
BsmI	GAATGC	4 cut(s)	351, 487, 978, 1597
BsnI	GGCC	2 cut(s)	1570, 1824
Bso31I	GGTCTC	1 cut(s)	1170
BsoBI	CYCGRG	1 cut(s)	1773
Bsp1407I	TGTACA	1 cut(s)	813
Bsp143I	GATC	6 cut(s)	291, 749, 836, 886, 1066, 1621
Bsp19I	CCATGG	1 cut(s)	216
BspANI	GGCC	2 cut(s)	1570, 1824
BspCNI	CTCAG	7 cut(s)	121, 637, 715, 757, 1389, 1449, 1643
BspFNI	CGCG	2 cut(s)	537, 1692
BspLI	GGNNCC	2 cut(s)	222, 751
BspMI	ACCTGC	3 cut(s)	1447, 1526, 1754
BspPI	GGATC	4 cut(s)	299, 744, 757, 894
BspTNI	GGTCTC	1 cut(s)	1170
BsrDI	GCAATG	1 cut(s)	1327
BsrFI	RCCGGY	1 cut(s)	527
BsrGI	TGTACA	1 cut(s)	813
BsrI	ACTGG	3 cut(s)	1059, 1188, 1341
BssAI	RCCGGY	1 cut(s)	527
BssECI	CCNNGG	6 cut(s)	216, 653, 674, 685, 1736, 1756
BssMI	GATC	6 cut(s)	291, 749, 836, 886, 1066, 1621
BssT1I	CCWWGG	2 cut(s)	216, 1756
Bst2UI	CCWGG	2 cut(s)	655, 686
Bst4CI	ACNGT	1 cut(s)	1684
Bst6I	CTCTTC	2 cut(s)	374, 1833
BstAPI	GCANNNNNTGC	1 cut(s)	1541
BstAUI	TGTACA	1 cut(s)	813
BstC8I	GCNNGC	2 cut(s)	1494, 1690
BstDEI	CTNAG	7 cut(s)	108, 645, 723, 744, 1397, 1457, 1630
BstDSI	CCRYGG	1 cut(s)	216
BstF5I	GGATG	7 cut(s)	162, 249, 385, 663, 775, 942, 1840
BstFNI	CGCG	2 cut(s)	537, 1692
BstHHI	GCGC	2 cut(s)	539, 1119
BstKTI	GATC	6 cut(s)	294, 752, 839, 889, 1069, 1624
BstMAI	GTCTC	1 cut(s)	1170
BstMBI	GATC	6 cut(s)	291, 749, 836, 886, 1066, 1621
BstMWI	GCNNNNNNNGC	5 cut(s)	474, 545, 1541, 1576, 1760
BstNI	CCWGG	2 cut(s)	655, 686
BstNSI	RCATGY	2 cut(s)	1496, 1579
BstSCI	CCNGG	5 cut(s)	472, 653, 673, 684, 1736
BstSFI	CTRYAG	2 cut(s)	1120, 1428
BstUI	CGCG	2 cut(s)	537, 1692
BstV1I	GCAGC	5 cut(s)	370, 438, 1090, 1393, 1738
BstV2I	GAAGAC	1 cut(s)	1653
BstX2I	RGATCY	1 cut(s)	749
BstYI	RGATCY	1 cut(s)	749
Bsu36I	CCTNAGG	2 cut(s)	723, 744
BsuRI	GGCC	2 cut(s)	1570, 1824
BtgI	CCRYGG	1 cut(s)	216
BtrI	CACGTC	1 cut(s)	172
BtsCI	GGATG	7 cut(s)	162, 249, 385, 663, 775, 942, 1840
BtsI	GCAGTG	1 cut(s)	709
BtsIMutI	CAGTG	2 cut(s)	709, 1195
BveI	ACCTGC	3 cut(s)	1447, 1526, 1754
Cac8I	GCNNGC	2 cut(s)	1494, 1690
CaiI	CAGNNNCTG	1 cut(s)	1456
CfoI	GCGC	2 cut(s)	539, 1119
Cfr10I	RCCGGY	1 cut(s)	527
Cfr13I	GGNCC	6 cut(s)	220, 301, 439, 965, 1568, 1823
CseI	GACGC	2 cut(s)	401, 1163
Csp6I	GTAC	4 cut(s)	775, 814, 1058, 1488
CspAI	ACCGGT	1 cut(s)	527
CspCI	CAANNNNNGTGG	2 cut(s)	899, 934
CviAII	CATG	9 cut(s)	217, 283, 1006, 1317, 1493, 1576, 1654, 1659, 1801
CviQI	GTAC	4 cut(s)	775, 814, 1058, 1488
DdeI	CTNAG	7 cut(s)	108, 645, 723, 744, 1397, 1457, 1630
DpnI	GATC	6 cut(s)	293, 751, 838, 888, 1068, 1623
DpnII	GATC	6 cut(s)	291, 749, 836, 886, 1066, 1621
DraIII	CACNNNGTG	1 cut(s)	568
Eam1104I	CTCTTC	2 cut(s)	374, 1833
EarI	CTCTTC	2 cut(s)	374, 1833
EciI	GGCGGA	5 cut(s)	155, 217, 235, 242, 362
Eco130I	CCWWGG	2 cut(s)	216, 1756
Eco31I	GGTCTC	1 cut(s)	1170
Eco47I	GGWCC	4 cut(s)	220, 301, 439, 965
Eco57I	CTGAAG	3 cut(s)	1070, 1545, 1814
Eco81I	CCTNAGG	2 cut(s)	723, 744
Eco88I	CYCGRG	1 cut(s)	1773
EcoRI	GAATTC	1 cut(s)	1805
EcoRII	CCWGG	2 cut(s)	653, 684
EcoT14I	CCWWGG	2 cut(s)	216, 1756
EcoT22I	ATGCAT	4 cut(s)	487, 1011, 1581, 1599
ErhI	CCWWGG	2 cut(s)	216, 1756
FaeI	CATG	9 cut(s)	220, 286, 1009, 1320, 1496, 1579, 1657, 1662, 1804
FalI	AAGNNNNNCTT	2 cut(s)	1068, 1100
FaqI	GGGAC	1 cut(s)	206
FatI	CATG	9 cut(s)	216, 282, 1005, 1316, 1492, 1575, 1653, 1658, 1800
FauI	CCCGC	1 cut(s)	1697
FauNDI	CATATG	2 cut(s)	877, 1141
FblI	GTMKAC	2 cut(s)	276, 1520
Fnu4HI	GCNGC	7 cut(s)	15, 359, 452, 540, 1104, 1382, 1752
FokI	GGATG	6 cut(s)	149, 236, 372, 670, 782, 949
Fsp4HI	GCNGC	7 cut(s)	15, 359, 452, 540, 1104, 1382, 1752
FspBI	CTAG	3 cut(s)	947, 975, 1280
GlaI	GCGC	2 cut(s)	538, 1118
GluI	GCNGC	7 cut(s)	15, 359, 452, 540, 1104, 1382, 1752
GsaI	CCCAGC	3 cut(s)	330, 1500, 1677
GsuI	CTGGAG	3 cut(s)	125, 890, 1515
HaeIII	GGCC	2 cut(s)	1570, 1824
HapII	CCGG	5 cut(s)	474, 528, 674, 794, 1738
HgaI	GACGC	2 cut(s)	401, 1163
HhaI	GCGC	2 cut(s)	539, 1119
Hin1II	CATG	9 cut(s)	220, 286, 1009, 1320, 1496, 1579, 1657, 1662, 1804
Hin6I	GCGC	2 cut(s)	537, 1117
HinP1I	GCGC	2 cut(s)	537, 1117
HincII	GTYRAC	1 cut(s)	277
HindII	GTYRAC	1 cut(s)	277
HinfI	GANTC	3 cut(s)	345, 958, 1133
HpaII	CCGG	5 cut(s)	474, 528, 674, 794, 1738
HphI	GGTGA	8 cut(s)	17, 110, 166, 622, 663, 701, 1235, 1725
Hpy166II	GTNNAC	5 cut(s)	277, 709, 1226, 1403, 1521
Hpy188I	TCNGA	8 cut(s)	190, 334, 490, 754, 891, 1330, 1458, 1633
Hpy188III	TCNNGA	5 cut(s)	142, 389, 722, 1151, 1832
Hpy8I	GTNNAC	5 cut(s)	277, 709, 1226, 1403, 1521
Hpy99I	CGWCG	2 cut(s)	278, 395
HpyAV	CCTTC	3 cut(s)	686, 1094, 1803
HpyCH4III	ACNGT	1 cut(s)	1684
HpyCH4IV	ACGT	3 cut(s)	171, 899, 930
HpyF10VI	GCNNNNNNNGC	5 cut(s)	474, 545, 1541, 1576, 1760
HpyF3I	CTNAG	7 cut(s)	108, 645, 723, 744, 1397, 1457, 1630
HpySE526I	ACGT	3 cut(s)	171, 899, 930
Hsp92II	CATG	9 cut(s)	220, 286, 1009, 1320, 1496, 1579, 1657, 1662, 1804
HspAI	GCGC	2 cut(s)	537, 1117
Kzo9I	GATC	6 cut(s)	291, 749, 836, 886, 1066, 1621
LmnI	GCTCC	6 cut(s)	335, 829, 1249, 1294, 1534, 1760
Lsp1109I	GCAGC	5 cut(s)	370, 438, 1090, 1393, 1738
LweI	GCATC	9 cut(s)	181, 324, 494, 745, 1090, 1200, 1260, 1584, 1738
MaeI	CTAG	3 cut(s)	947, 975, 1280
MaeII	ACGT	3 cut(s)	171, 899, 930
MaeIII	GTNAC	6 cut(s)	172, 460, 648, 669, 805, 900
MalI	GATC	6 cut(s)	293, 751, 838, 888, 1068, 1623
MboI	GATC	6 cut(s)	291, 749, 836, 886, 1066, 1621
MboII	GAAGA	5 cut(s)	361, 1058, 1445, 1658, 1820
MfeI	CAATTG	1 cut(s)	840
MflI	RGATCY	1 cut(s)	749
MluCI	AATT	9 cut(s)	40, 840, 1169, 1215, 1308, 1462, 1512, 1554, 1805
MlyI	GAGTC	2 cut(s)	339, 1127
MmeI	TCCRAC	2 cut(s)	357, 1271
Mph1103I	ATGCAT	4 cut(s)	487, 1011, 1581, 1599
MseI	TTAA	2 cut(s)	1206, 1466
MslI	CAYNNNNRTG	1 cut(s)	1208
MspA1I	CMGCKG	2 cut(s)	236, 422
MspI	CCGG	5 cut(s)	474, 528, 674, 794, 1738
MspR9I	CCNGG	5 cut(s)	474, 655, 675, 686, 1738
MunI	CAATTG	1 cut(s)	840
Mva1269I	GAATGC	4 cut(s)	351, 487, 978, 1597
MvaI	CCWGG	2 cut(s)	655, 686
MvnI	CGCG	2 cut(s)	537, 1692
MwoI	GCNNNNNNNGC	5 cut(s)	474, 545, 1541, 1576, 1760
NciI	CCSGG	3 cut(s)	474, 675, 1738
NcoI	CCATGG	1 cut(s)	216
NdeI	CATATG	2 cut(s)	877, 1141
NdeII	GATC	6 cut(s)	291, 749, 836, 886, 1066, 1621
NlaIII	CATG	9 cut(s)	220, 286, 1009, 1320, 1496, 1579, 1657, 1662, 1804
NlaIV	GGNNCC	2 cut(s)	222, 751
NmeAIII	GCCGAG	1 cut(s)	281
NmuCI	GTSAC	4 cut(s)	172, 460, 669, 805
NsiI	ATGCAT	4 cut(s)	487, 1011, 1581, 1599
NspI	RCATGY	2 cut(s)	1496, 1579
PaeI	GCATGC	1 cut(s)	1496
PaeR7I	CTCGAG	1 cut(s)	1773
PaqCI	CACCTGC	2 cut(s)	1526, 1754
PcsI	WCGNNNNNNNCGW	1 cut(s)	387
PctI	GAATGC	4 cut(s)	351, 487, 978, 1597
PfeI	GAWTC	1 cut(s)	958
Pfl23II	CGTACG	1 cut(s)	1487
PflMI	CCANNNNNTGG	2 cut(s)	765, 1538
PinAI	ACCGGT	1 cut(s)	527
PkrI	GCNGC	7 cut(s)	16, 360, 453, 541, 1105, 1383, 1753
PleI	GAGTC	2 cut(s)	339, 1127
PpsI	GAGTC	2 cut(s)	339, 1127
Psp1406I	AACGTT	1 cut(s)	899
Psp6I	CCWGG	2 cut(s)	653, 684
PspFI	CCCAGC	3 cut(s)	326, 1496, 1673
PspGI	CCWGG	2 cut(s)	653, 684
PspLI	CGTACG	1 cut(s)	1487
PspN4I	GGNNCC	2 cut(s)	222, 751
PspPI	GGNCC	6 cut(s)	220, 301, 439, 965, 1568, 1823
PspXI	VCTCGAGB	1 cut(s)	1773
PsrI	GAACNNNNNNTAC	2 cut(s)	1428, 1460
PstNI	CAGNNNCTG	1 cut(s)	1456
PsuI	RGATCY	1 cut(s)	749
PvuII	CAGCTG	1 cut(s)	422
RsaI	GTAC	4 cut(s)	776, 815, 1059, 1489
RsaNI	GTAC	4 cut(s)	775, 814, 1058, 1488
RseI	CAYNNNNRTG	1 cut(s)	1208
SalI	GTCGAC	1 cut(s)	275
SaqAI	TTAA	2 cut(s)	1206, 1466
SatI	GCNGC	7 cut(s)	15, 359, 452, 540, 1104, 1382, 1752
Sau3AI	GATC	6 cut(s)	291, 749, 836, 886, 1066, 1621
Sau96I	GGNCC	6 cut(s)	220, 301, 439, 965, 1568, 1823
ScaI	AGTACT	1 cut(s)	776
SchI	GAGTC	2 cut(s)	339, 1127
ScrFI	CCNGG	5 cut(s)	474, 655, 675, 686, 1738
SfaNI	GCATC	9 cut(s)	181, 324, 494, 745, 1090, 1200, 1260, 1584, 1738
SfcI	CTRYAG	2 cut(s)	1120, 1428
Sfr274I	CTCGAG	1 cut(s)	1773
SinI	GGWCC	4 cut(s)	220, 301, 439, 965
SlaI	CTCGAG	1 cut(s)	1773
SmiMI	CAYNNNNRTG	1 cut(s)	1208
SmlI	CTYRAG	1 cut(s)	1773
SmoI	CTYRAG	1 cut(s)	1773
SphI	GCATGC	1 cut(s)	1496
Sse9I	AATT	9 cut(s)	40, 840, 1169, 1215, 1308, 1462, 1512, 1554, 1805
SspI	AATATT	1 cut(s)	1111
SspMI	CTAG	3 cut(s)	947, 975, 1280
StyD4I	CCNGG	5 cut(s)	472, 653, 673, 684, 1736
StyI	CCWWGG	2 cut(s)	216, 1756
TaaI	ACNGT	1 cut(s)	1684
TaiI	ACGT	3 cut(s)	174, 902, 933
TaqI	TCGA	6 cut(s)	276, 294, 363, 1470, 1701, 1774
TaqII	GACCGA	2 cut(s)	456, 849
TasI	AATT	9 cut(s)	40, 840, 1169, 1215, 1308, 1462, 1512, 1554, 1805
TatI	WGTACW	2 cut(s)	774, 813
TauI	GCSGC	1 cut(s)	542
TfiI	GAWTC	1 cut(s)	958
Tru1I	TTAA	2 cut(s)	1206, 1466
Tru9I	TTAA	2 cut(s)	1206, 1466
TscAI	CASTG	2 cut(s)	716, 1195
TseFI	GTSAC	4 cut(s)	172, 460, 669, 805
TseI	GCWGC	6 cut(s)	14, 358, 451, 1103, 1381, 1751
Tsp45I	GTSAC	4 cut(s)	172, 460, 669, 805
TspDTI	ATGAA	2 cut(s)	271, 804
TspGWI	ACGGA	2 cut(s)	1174, 1712
TspRI	CASTG	2 cut(s)	716, 1195
Van91I	CCANNNNNTGG	2 cut(s)	765, 1538
VpaK11BI	GGWCC	4 cut(s)	220, 301, 439, 965
XapI	RAATTY	3 cut(s)	40, 1215, 1805
XceI	RCATGY	2 cut(s)	1496, 1579
XcmI	CCANNNNNNNNNTGG	2 cut(s)	214, 565
XhoI	CTCGAG	1 cut(s)	1773
XmiI	GTMKAC	2 cut(s)	276, 1520
XspI	CTAG	3 cut(s)	947, 975, 1280
ZrmI	AGTACT	1 cut(s)	776
Zsp2I	ATGCAT	4 cut(s)	487, 1011, 1581, 1599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.