Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005687

Physical Location & Seq

Genomic Coordinates Forward (+)

5762827 .. 5765921

Gene Structure 3095 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g08710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGCTTCTTCTCTCTGCAACCACCCACCAGCACCCGTCAATTTCCACTTCTACCCTCCTCTTTCCCCCTATTTCCCACAAACTCCCCGCCTCCCTCAAACCCAACGCCACCTCCACTCCCCGACCCCATGACCTCCTCACCATCAACGCCTTCTCCCCCTCCTCCCTCCAAAACCCTAACCCTAGCTCCCCCCAGACCATCCGCCACGTCACTCACTCCGCTTCCGATGGCGACCCCGACTCCAATTCCATGGTCCCCTCCGCCTCCGCCGTCGCCGCCGCCATCCGCAGAGCCTCCACTTCCCCCGTCGACTTCATGCAGAGGATCGAGAAGGACCAGAAGAGCGGCATCGTGCTTCCCAGCCCCGACTTTCAAAGACTCTGCATTCAGCAGTTGGACCTCTTTCGCCGAATCGTCGACCCCGGTGCTCTCCTCTCGGTGTATGTAAGACCAGCTGGTAGTTATGTGATGGACCGATTAGAGCTTCGTAGGGTAACTTGCCATCCAGGAGTGAAGGCATCAGACATTGTGATATTAGTCGGAAGTTTTAGTGTTGCTGCCGGTTTTCGTGCCGCGGAAGCCGTGCTCTCCAATCACAAAGTGGAAGTTGTAGCTGAGTGTAAAGCTGTGGTTTTTCCGATGGTGAAGCACCCTTTTGTGGTAGGCTTCTTGGTTGCTGAACTTCCCGGGATGGAAATGCCTCCGCCACCCGGGAGTGTTCAGGGTGAGGGTCGTGATTTGGTTTGCCGCCCGACTTCTGAGGAAGCCTATGCTTTGCCTCCAAGCTCCAATGTCAAATCTTGGGGTACTCCTTGCAGTCTGGATGATCACGCTGAACCATCATTAAGAGTTTACAAGTTTAGTGCTGAGCAGATATCAAATGCTATCAACATTTCTCGGTCTATAGCTTTGGCGTATGTTATGGATCAGAAGGCAATGCTACTCCAGCAGTCATCATGGCAGAATAATGTCAGGATGGGTAGTCTGGTTGAACAAATTCGTGGTCCTCTTTCTAGCCTTCGAACCTTAAGTAAAATGTTATCCATGCATATGAAGAGGAGTGAGATTTCTTATGACATTGTTGAAAATATACGGGTGCAAGGCGATCATATGAAAGATACCCTTCAGCAACTCCAGGATGCTGTTTACTTGACCAAGGCTAATATCATGCGCTCTGGTGAACATGATTCAACATATTCCTATCCTGACTCAGCGAGGTCTCGGTTACTGAATAACCTTCCAAGGGATAGTTCCAGCATTAAGATGCAAGTTCCAAGCGAACAACATTCTCTAACTGCCGCAACCAAAGATACGGAGATGCCCATGCCACCCCTAGCCCTTGCTCCTTTACAGCAAAATGGGATTAGACCTTGCAATGTTTCTGATATACTCGTAGATTTGGTTGAAGCTGTAAGACCTCTGGCTAAAAACCAGCAGCGCGTGGTAGAACTGAATGAACTTGAAAACTCTTTGCAAGTTGCTGTAGAAGAACCTGCTTTGCGACAGGCTCTGAGCAATTTAATCGAGAGTGCATTACTGCGTACGCACAGTGGGGGAAAGGTAGAAATTGTGTCTACTGGAGCACCAGCAGGTGGTGCTCTTGTAGTAATTGATGACGATGGGCCTGATATGCACTATATGACACAAATGCATTCTCTCACTCCTTTTGGAGCCGATCTCTTCTCAGAAAATATGGTTGAAGACAACATGACCTGGAACTTTGTGGCCGGGCTGACAGTTGCTCGTGAGATCCTCGAAAGTTATGGCTGTGTTGTCCGTGTCATATCACCCCGAATCACAGATGCTGAACTTGGAGCAGGTGGAACTCGAGTAGAACTGTGGCTGCCTTCTCTCATGGAAATATCCGATATTGATGGCCCTGCTCAGGGGGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009593 GO:0009987 GO:0010109 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019222 GO:0019538 GO:0031323 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0048037 GO:0048038 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051775 GO:0051776 GO:0060255 GO:0065007 GO:0071704 GO:0080005 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

No domains found.

Protein Analysis

632

Amino Acids

68.63

Weight (kDa)

5.74

Isoelectric Point (pI)

55.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	497 - 616	7.8e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005687)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67840 AT1G67840
fragaria_vesca	FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g35670
malus_domestica	MD13G1099700.v1.1
prunus_persica	Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1
pyrus_communis	pycom12g22130 pycom13g08710
rosa_chinensis	RchiOBHm_Chr4g0433151
rosa_laevigata	RLG00000006779
rosa_multiflora	Rmu_sc0020880.1_g000001 Rmu_ssc0000295.1_g000015
rosa_roxburghii	Rroxscaffold_5G00374630
rosa_rugosa	Rorug04G0266300 Rorug04G0266400
rosa_samantha	Rh4AG320100 Rh4BG328300 Rh4CG343700 Rh4DG323700
rosa_wichuraiana	Rw4G027790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1580, 1808
Acc36I	ACCTGC	3 cut(s)	1501, 1580, 1808
AccB7I	CCANNNNNTGG	1 cut(s)	1592
AccBSI	CCGCTC	1 cut(s)	345
AccI	GTMKAC	3 cut(s)	309, 417, 1574
AccII	CGCG	2 cut(s)	575, 1440
AclWI	GGATC	3 cut(s)	332, 933, 1744
AcoI	YGGCCR	1 cut(s)	1725
AcsI	RAATTY	1 cut(s)	996
AcuI	CTGAAG	1 cut(s)	1109
AdeI	CACNNNGTG	1 cut(s)	601
AfaI	GTAC	2 cut(s)	808, 1543
AfiI	CCNNNNNNNGG	6 cut(s)	658, 710, 1243, 1592, 1885, 1886
AflII	CTTAAG	1 cut(s)	1027
AgsI	TTSAA	7 cut(s)	374, 992, 1085, 1191, 1406, 1463, 1700
AjiI	CACGTC	1 cut(s)	208
AjnI	CCWGG	3 cut(s)	505, 1134, 1712
AjuI	GAANNNNNNNTTGG	2 cut(s)	1234, 1266
AluBI	AGCT	8 cut(s)	186, 455, 484, 614, 626, 786, 908, 1409
AluI	AGCT	8 cut(s)	186, 455, 484, 614, 626, 786, 908, 1409
Alw21I	GWGCWC	4 cut(s)	430, 588, 1585, 1600
Alw26I	GTCTC	1 cut(s)	1224
AlwI	GGATC	3 cut(s)	332, 933, 1744
AlwNI	CAGNNNCTG	2 cut(s)	1510, 1805
Ama87I	CYCGRG	3 cut(s)	686, 710, 1827
AoxI	GGCC	3 cut(s)	1622, 1725, 1876
ApeKI	GCWGC	3 cut(s)	557, 1435, 1843
ApoI	RAATTY	1 cut(s)	996
ArsI	GACNNNNNNTTYG	2 cut(s)	988, 1020
Asp700I	GAANNNNTTC	1 cut(s)	996
AspLEI	GCGC	2 cut(s)	1173, 1440
AspS9I	GGNCC	7 cut(s)	253, 334, 397, 472, 1004, 1622, 1877
AsuC2I	CCSGG	6 cut(s)	423, 687, 688, 711, 712, 1729
AsuHPI	GGTGA	5 cut(s)	130, 655, 737, 1190, 1779
AsuII	TTCGAA	1 cut(s)	1021
AvaI	CYCGRG	3 cut(s)	686, 710, 1827
AvaII	GGWCC	5 cut(s)	253, 334, 397, 472, 1004
BauI	CACGAG	1 cut(s)	1743
BbsI	GAAGAC	1 cut(s)	1707
Bbv12I	GWGCWC	4 cut(s)	430, 588, 1585, 1600
BbvI	GCAGC	3 cut(s)	544, 1447, 1830
BceAI	ACGGC	2 cut(s)	254, 566
BcgI	CGANNNNNNTGC	4 cut(s)	407, 441, 1504, 1538
BciT130I	CCWGG	3 cut(s)	507, 1136, 1714
BclI	TGATCA	1 cut(s)	826
BcnI	CCSGG	6 cut(s)	423, 687, 688, 711, 712, 1729
BcoDI	GTCTC	1 cut(s)	1224
BfaI	CTAG	3 cut(s)	183, 1014, 1334
BfmI	CTRYAG	2 cut(s)	903, 1482
BfrI	CTTAAG	1 cut(s)	1027
BfuAI	ACCTGC	3 cut(s)	1501, 1580, 1808
BisI	GCNGC	9 cut(s)	276, 279, 346, 558, 573, 748, 1299, 1436, 1844
BlpI	GCTNAGC	1 cut(s)	867
BlsI	GCNGC	9 cut(s)	277, 280, 347, 559, 574, 749, 1300, 1437, 1845
Bme1390I	CCNGG	9 cut(s)	423, 507, 687, 688, 711, 712, 1136, 1714, 1729
Bme18I	GGWCC	5 cut(s)	253, 334, 397, 472, 1004
BmeT110I	CYCGRG	3 cut(s)	686, 710, 1827
BmgBI	CACGTC	1 cut(s)	208
BmgT120I	GGNCC	7 cut(s)	253, 334, 397, 472, 1004, 1622, 1877
BmiI	GGNNCC	2 cut(s)	255, 1672
BmrFI	CCNGG	9 cut(s)	423, 507, 687, 688, 711, 712, 1136, 1714, 1729
BmsI	GCATC	6 cut(s)	357, 527, 1129, 1254, 1308, 1792
BpiI	GAAGAC	1 cut(s)	1707
BplI	GAGNNNNNCTC	2 cut(s)	1662, 1694
BpmI	CTGGAG	3 cut(s)	929, 1118, 1599
Bpu10I	CCTNAGC	1 cut(s)	1884
Bpu1102I	GCTNAGC	1 cut(s)	867
Bpu14I	TTCGAA	1 cut(s)	1021
BpuMI	CCSGG	6 cut(s)	423, 687, 688, 711, 712, 1729
BsaI	GGTCTC	1 cut(s)	1224
BsaJI	CCNNGG	7 cut(s)	249, 421, 573, 686, 710, 1155, 1241
Bsc4I	CCNNNNNNNGG	6 cut(s)	658, 710, 1243, 1592, 1885, 1886
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	1 cut(s)	1582
Bse3DI	GCAATG	2 cut(s)	942, 1381
BseBI	CCWGG	3 cut(s)	507, 1136, 1714
BseDI	CCNNGG	7 cut(s)	249, 421, 573, 686, 710, 1155, 1241
BseGI	GGATG	7 cut(s)	198, 282, 502, 696, 829, 981, 1144
BseLI	CCNNNNNNNGG	6 cut(s)	658, 710, 1243, 1592, 1885, 1886
BseMI	GCAATG	2 cut(s)	942, 1381
BseMII	CTCAG	6 cut(s)	606, 750, 858, 1224, 1502, 1698
BseNI	ACTGG	1 cut(s)	1582
BseRI	GAGGAG	5 cut(s)	47, 125, 151, 422, 1072
BseXI	GCAGC	3 cut(s)	544, 1447, 1830
BseYI	CCCAGC	1 cut(s)	359
Bsh1236I	CGCG	2 cut(s)	575, 1440
BshFI	GGCC	3 cut(s)	1624, 1727, 1878
BsiHKAI	GWGCWC	4 cut(s)	430, 588, 1585, 1600
BsiHKCI	CYCGRG	3 cut(s)	686, 710, 1827
BsiSI	CCGG	5 cut(s)	423, 561, 687, 711, 1728
BsiWI	CGTACG	1 cut(s)	1541
BslFI	GGGAC	1 cut(s)	239
BslI	CCNNNNNNNGG	6 cut(s)	658, 710, 1243, 1592, 1885, 1886
BsmAI	GTCTC	1 cut(s)	1224
BsmFI	GGGAC	1 cut(s)	239
BsmI	GAATGC	2 cut(s)	384, 1651
BsnI	GGCC	3 cut(s)	1624, 1727, 1878
Bso31I	GGTCTC	1 cut(s)	1224
BsoBI	CYCGRG	3 cut(s)	686, 710, 1827
Bsp119I	TTCGAA	1 cut(s)	1021
Bsp1286I	GDGCHC	4 cut(s)	430, 588, 1585, 1600
Bsp143I	GATC	6 cut(s)	324, 826, 925, 1105, 1675, 1749
Bsp1720I	GCTNAGC	1 cut(s)	867
Bsp19I	CCATGG	1 cut(s)	249
BspANI	GGCC	3 cut(s)	1624, 1727, 1878
BspCNI	CTCAG	6 cut(s)	607, 751, 859, 1223, 1503, 1697
BspFNI	CGCG	2 cut(s)	575, 1440
BspLI	GGNNCC	2 cut(s)	255, 1672
BspMI	ACCTGC	3 cut(s)	1501, 1580, 1808
BspPI	GGATC	3 cut(s)	332, 933, 1744
BspQI	GCTCTTC	1 cut(s)	335
BspT104I	TTCGAA	1 cut(s)	1021
BspTI	CTTAAG	1 cut(s)	1027
BspTNI	GGTCTC	1 cut(s)	1224
BsrBI	CCGCTC	1 cut(s)	345
BsrDI	GCAATG	2 cut(s)	942, 1381
BsrFI	RCCGGY	1 cut(s)	560
BsrI	ACTGG	1 cut(s)	1582
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	7 cut(s)	249, 421, 573, 686, 710, 1155, 1241
BssMI	GATC	6 cut(s)	324, 826, 925, 1105, 1675, 1749
BssSI	CACGAG	1 cut(s)	1743
BssT1I	CCWWGG	3 cut(s)	249, 1155, 1241
Bst2BI	CACGAG	1 cut(s)	1743
Bst2UI	CCWGG	3 cut(s)	507, 1136, 1714
Bst4CI	ACNGT	3 cut(s)	1550, 1738, 1839
Bst6I	CTCTTC	3 cut(s)	335, 1049, 1685
BstAFI	CTTAAG	1 cut(s)	1027
BstAPI	GCANNNNNTGC	1 cut(s)	1595
BstBI	TTCGAA	1 cut(s)	1021
BstDEI	CTNAG	7 cut(s)	615, 759, 867, 1210, 1511, 1684, 1884
BstDSI	CCRYGG	2 cut(s)	249, 573
BstF5I	GGATG	7 cut(s)	198, 282, 502, 696, 829, 981, 1144
BstFNI	CGCG	2 cut(s)	575, 1440
BstHHI	GCGC	2 cut(s)	1173, 1440
BstKTI	GATC	6 cut(s)	327, 829, 928, 1108, 1678, 1752
BstMAI	GTCTC	1 cut(s)	1224
BstMBI	GATC	6 cut(s)	324, 826, 925, 1105, 1675, 1749
BstMWI	GCNNNNNNNGC	6 cut(s)	275, 578, 946, 1595, 1630, 1889
BstNI	CCWGG	3 cut(s)	507, 1136, 1714
BstSCI	CCNGG	9 cut(s)	421, 505, 685, 686, 709, 710, 1134, 1712, 1727
BstSFI	CTRYAG	2 cut(s)	903, 1482
BstUI	CGCG	2 cut(s)	575, 1440
BstV1I	GCAGC	3 cut(s)	544, 1447, 1830
BstV2I	GAAGAC	1 cut(s)	1707
BstX2I	RGATCY	1 cut(s)	1749
BstXI	CCANNNNNNTGG	1 cut(s)	250
BstYI	RGATCY	1 cut(s)	1749
BsuRI	GGCC	3 cut(s)	1624, 1727, 1878
BtgI	CCRYGG	2 cut(s)	249, 573
BtrI	CACGTC	1 cut(s)	208
BtsCI	GGATG	7 cut(s)	198, 282, 502, 696, 829, 981, 1144
BtsIMutI	CAGTG	1 cut(s)	1555
BveI	ACCTGC	3 cut(s)	1501, 1580, 1808
CaiI	CAGNNNCTG	2 cut(s)	1510, 1805
CfoI	GCGC	2 cut(s)	1173, 1440
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	7 cut(s)	253, 334, 397, 472, 1004, 1622, 1877
Cfr42I	CCGCGG	1 cut(s)	576
Cfr9I	CCCGGG	2 cut(s)	686, 710
Csp6I	GTAC	2 cut(s)	807, 1542
CviQI	GTAC	2 cut(s)	807, 1542
DdeI	CTNAG	7 cut(s)	615, 759, 867, 1210, 1511, 1684, 1884
DpnI	GATC	6 cut(s)	326, 828, 927, 1107, 1677, 1751
DpnII	GATC	6 cut(s)	324, 826, 925, 1105, 1675, 1749
DraIII	CACNNNGTG	1 cut(s)	601
EaeI	YGGCCR	1 cut(s)	1725
Eam1104I	CTCTTC	3 cut(s)	335, 1049, 1685
EarI	CTCTTC	3 cut(s)	335, 1049, 1685
EciI	GGCGGA	4 cut(s)	191, 250, 256, 693
Eco130I	CCWWGG	3 cut(s)	249, 1155, 1241
Eco31I	GGTCTC	1 cut(s)	1224
Eco32I	GATATC	1 cut(s)	876
Eco47I	GGWCC	5 cut(s)	253, 334, 397, 472, 1004
Eco57I	CTGAAG	1 cut(s)	1109
Eco88I	CYCGRG	3 cut(s)	686, 710, 1827
EcoRII	CCWGG	3 cut(s)	505, 1134, 1712
EcoRV	GATATC	1 cut(s)	876
EcoT14I	CCWWGG	3 cut(s)	249, 1155, 1241
EcoT22I	ATGCAT	2 cut(s)	1050, 1653
ErhI	CCWWGG	3 cut(s)	249, 1155, 1241
FalI	AAGNNNNNCTT	2 cut(s)	1107, 1139
FaqI	GGGAC	1 cut(s)	239
FauI	CCCGC	1 cut(s)	94
FauNDI	CATATG	2 cut(s)	1050, 1110
FbaI	TGATCA	1 cut(s)	826
FblI	GTMKAC	3 cut(s)	309, 417, 1574
Fnu4HI	GCNGC	9 cut(s)	276, 279, 346, 558, 573, 748, 1299, 1436, 1844
FokI	GGATG	7 cut(s)	185, 269, 489, 703, 836, 988, 1151
Fsp4HI	GCNGC	9 cut(s)	276, 279, 346, 558, 573, 748, 1299, 1436, 1844
FspBI	CTAG	3 cut(s)	183, 1014, 1334
GlaI	GCGC	2 cut(s)	1172, 1439
GluI	GCNGC	9 cut(s)	276, 279, 346, 558, 573, 748, 1299, 1436, 1844
GsaI	CCCAGC	1 cut(s)	363
GsuI	CTGGAG	3 cut(s)	929, 1118, 1599
HaeIII	GGCC	3 cut(s)	1624, 1727, 1878
HapII	CCGG	5 cut(s)	423, 561, 687, 711, 1728
HhaI	GCGC	2 cut(s)	1173, 1440
Hin6I	GCGC	2 cut(s)	1171, 1438
HinP1I	GCGC	2 cut(s)	1171, 1438
HincII	GTYRAC	2 cut(s)	310, 418
HindII	GTYRAC	2 cut(s)	310, 418
HinfI	GANTC	6 cut(s)	239, 378, 411, 1187, 1208, 1794
HpaII	CCGG	5 cut(s)	423, 561, 687, 711, 1728
HphI	GGTGA	5 cut(s)	130, 655, 737, 1190, 1779
Hpy166II	GTNNAC	6 cut(s)	310, 418, 853, 1147, 1181, 1575
Hpy188III	TCNNGA	7 cut(s)	328, 734, 821, 973, 1205, 1525, 1745
Hpy8I	GTNNAC	6 cut(s)	310, 418, 853, 1147, 1181, 1575
Hpy99I	CGWCG	3 cut(s)	275, 311, 419
HpyAV	CCTTC	8 cut(s)	160, 325, 508, 925, 1028, 1133, 1247, 1857
HpyCH4III	ACNGT	3 cut(s)	1550, 1738, 1839
HpyCH4IV	ACGT	1 cut(s)	207
HpyF10VI	GCNNNNNNNGC	6 cut(s)	275, 578, 946, 1595, 1630, 1889
HpyF3I	CTNAG	7 cut(s)	615, 759, 867, 1210, 1511, 1684, 1884
HpySE526I	ACGT	1 cut(s)	207
HspAI	GCGC	2 cut(s)	1171, 1438
Ksp22I	TGATCA	1 cut(s)	826
KspI	CCGCGG	1 cut(s)	576
Kzo9I	GATC	6 cut(s)	324, 826, 925, 1105, 1675, 1749
LguI	GCTCTTC	1 cut(s)	335
LmnI	GCTCC	6 cut(s)	191, 791, 1348, 1580, 1670, 1814
Lsp1109I	GCAGC	3 cut(s)	544, 1447, 1830
LweI	GCATC	6 cut(s)	357, 527, 1129, 1254, 1308, 1792
MaeI	CTAG	3 cut(s)	183, 1014, 1334
MaeII	ACGT	1 cut(s)	207
MaeIII	GTNAC	3 cut(s)	208, 493, 1224
MalI	GATC	6 cut(s)	326, 828, 927, 1107, 1677, 1751
MbiI	CCGCTC	1 cut(s)	345
MboI	GATC	6 cut(s)	324, 826, 925, 1105, 1675, 1749
MboII	GAAGA	5 cut(s)	352, 1066, 1499, 1672, 1712
MflI	RGATCY	1 cut(s)	1749
MhlI	GDGCHC	4 cut(s)	430, 588, 1585, 1600
MluCI	AATT	6 cut(s)	39, 244, 996, 1516, 1566, 1608
MlyI	GAGTC	3 cut(s)	233, 372, 1202
MmeI	TCCRAC	2 cut(s)	375, 520
Mph1103I	ATGCAT	2 cut(s)	1050, 1653
MroXI	GAANNNNTTC	1 cut(s)	996
MseI	TTAA	4 cut(s)	845, 1028, 1260, 1520
MslI	CAYNNNNRTG	2 cut(s)	1049, 1262
MspA1I	CMGCKG	2 cut(s)	455, 575
MspCI	CTTAAG	1 cut(s)	1027
MspI	CCGG	5 cut(s)	423, 561, 687, 711, 1728
MspR9I	CCNGG	9 cut(s)	423, 507, 687, 688, 711, 712, 1136, 1714, 1729
Mva1269I	GAATGC	2 cut(s)	384, 1651
MvaI	CCWGG	3 cut(s)	507, 1136, 1714
MvnI	CGCG	2 cut(s)	575, 1440
MwoI	GCNNNNNNNGC	6 cut(s)	275, 578, 946, 1595, 1630, 1889
NciI	CCSGG	6 cut(s)	423, 687, 688, 711, 712, 1729
NcoI	CCATGG	1 cut(s)	249
NdeI	CATATG	2 cut(s)	1050, 1110
NdeII	GATC	6 cut(s)	324, 826, 925, 1105, 1675, 1749
NlaIV	GGNNCC	2 cut(s)	255, 1672
NmuCI	GTSAC	1 cut(s)	208
NsiI	ATGCAT	2 cut(s)	1050, 1653
NspV	TTCGAA	1 cut(s)	1021
PaeR7I	CTCGAG	1 cut(s)	1827
PaqCI	CACCTGC	2 cut(s)	1580, 1808
PciSI	GCTCTTC	1 cut(s)	335
PctI	GAATGC	2 cut(s)	384, 1651
PdmI	GAANNNNTTC	1 cut(s)	996
PfeI	GAWTC	3 cut(s)	411, 1187, 1794
Pfl23II	CGTACG	1 cut(s)	1541
PflMI	CCANNNNNTGG	1 cut(s)	1592
PfoI	TCCNGGA	2 cut(s)	505, 1134
PkrI	GCNGC	9 cut(s)	277, 280, 347, 559, 574, 749, 1300, 1437, 1845
PleI	GAGTC	3 cut(s)	233, 372, 1202
PpsI	GAGTC	3 cut(s)	233, 372, 1202
Psp6I	CCWGG	3 cut(s)	505, 1134, 1712
PspFI	CCCAGC	1 cut(s)	359
PspGI	CCWGG	3 cut(s)	505, 1134, 1712
PspLI	CGTACG	1 cut(s)	1541
PspN4I	GGNNCC	2 cut(s)	255, 1672
PspPI	GGNCC	7 cut(s)	253, 334, 397, 472, 1004, 1622, 1877
PspXI	VCTCGAGB	1 cut(s)	1827
PstNI	CAGNNNCTG	2 cut(s)	1510, 1805
PsuI	RGATCY	1 cut(s)	1749
PvuII	CAGCTG	1 cut(s)	455
RsaI	GTAC	2 cut(s)	808, 1543
RsaNI	GTAC	2 cut(s)	807, 1542
RseI	CAYNNNNRTG	2 cut(s)	1049, 1262
SacII	CCGCGG	1 cut(s)	576
SalI	GTCGAC	2 cut(s)	308, 416
SapI	GCTCTTC	1 cut(s)	335
SaqAI	TTAA	4 cut(s)	845, 1028, 1260, 1520
SatI	GCNGC	9 cut(s)	276, 279, 346, 558, 573, 748, 1299, 1436, 1844
Sau3AI	GATC	6 cut(s)	324, 826, 925, 1105, 1675, 1749
Sau96I	GGNCC	7 cut(s)	253, 334, 397, 472, 1004, 1622, 1877
SchI	GAGTC	3 cut(s)	233, 372, 1202
ScrFI	CCNGG	9 cut(s)	423, 507, 687, 688, 711, 712, 1136, 1714, 1729
SduI	GDGCHC	4 cut(s)	430, 588, 1585, 1600
SfaNI	GCATC	6 cut(s)	357, 527, 1129, 1254, 1308, 1792
SfcI	CTRYAG	2 cut(s)	903, 1482
Sfr274I	CTCGAG	1 cut(s)	1827
Sfr303I	CCGCGG	1 cut(s)	576
SfuI	TTCGAA	1 cut(s)	1021
SgrBI	CCGCGG	1 cut(s)	576
SinI	GGWCC	5 cut(s)	253, 334, 397, 472, 1004
SlaI	CTCGAG	1 cut(s)	1827
SmaI	CCCGGG	2 cut(s)	688, 712
SmiMI	CAYNNNNRTG	2 cut(s)	1049, 1262
SmlI	CTYRAG	2 cut(s)	1027, 1827
SmoI	CTYRAG	2 cut(s)	1027, 1827
Sse9I	AATT	6 cut(s)	39, 244, 996, 1516, 1566, 1608
SspMI	CTAG	3 cut(s)	183, 1014, 1334
StyD4I	CCNGG	9 cut(s)	421, 505, 685, 686, 709, 710, 1134, 1712, 1727
StyI	CCWWGG	3 cut(s)	249, 1155, 1241
TaaI	ACNGT	3 cut(s)	1550, 1738, 1839
TaiI	ACGT	1 cut(s)	210
TaqI	TCGA	7 cut(s)	309, 327, 417, 1021, 1524, 1755, 1828
TaqII	GACCGA	2 cut(s)	489, 888
TasI	AATT	6 cut(s)	39, 244, 996, 1516, 1566, 1608
TauI	GCSGC	6 cut(s)	278, 281, 348, 575, 750, 1301
TfiI	GAWTC	3 cut(s)	411, 1187, 1794
Tru1I	TTAA	4 cut(s)	845, 1028, 1260, 1520
Tru9I	TTAA	4 cut(s)	845, 1028, 1260, 1520
TscAI	CASTG	1 cut(s)	1555
TseFI	GTSAC	1 cut(s)	208
TseI	GCWGC	3 cut(s)	557, 1435, 1843
Tsp45I	GTSAC	1 cut(s)	208
TspDTI	ATGAA	4 cut(s)	304, 1067, 1127, 1470
TspGWI	ACGGA	2 cut(s)	1328, 1766
TspMI	CCCGGG	2 cut(s)	686, 710
TspRI	CASTG	1 cut(s)	1555
Van91I	CCANNNNNTGG	1 cut(s)	1592
Vha464I	CTTAAG	1 cut(s)	1027
VpaK11BI	GGWCC	5 cut(s)	253, 334, 397, 472, 1004
XapI	RAATTY	1 cut(s)	996
XcmI	CCANNNNNNNNNTGG	1 cut(s)	598
XhoI	CTCGAG	1 cut(s)	1827
XmaI	CCCGGG	2 cut(s)	686, 710
XmiI	GTMKAC	3 cut(s)	309, 417, 1574
XmnI	GAANNNNTTC	1 cut(s)	996
XspI	CTAG	3 cut(s)	183, 1014, 1334
Zsp2I	ATGCAT	2 cut(s)	1050, 1653

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.