Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0005687

Physical Location & Seq

Genomic Coordinates Reverse (-)

54870606 .. 54874826

Gene Structure 4221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG323700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGCTTCTCTCTGCTGCAATCACTCACCAACACCCATCAAATTCCGCTTCTACCCTCCTCCTTTCCCCTATTTCCCCCAAACTCCCCTCCACCTCCCTCAAACCCCCTCAGCGACCTCACCTCCTCCCCAACGCCTCCCTCCAGAACCCTACCCCCCAAACCATCCGCCACGTCACCCACACCCCCTCCGATGCGGACCCCGAAGCCAACAACTCCATGGTCCCCTCCGCCTCCGCCGTCGCCTCCGCTATCAGCCGAGCATCCACCTCCCCCGTCGACTTCATGCAGAGGATCGACAAGGACCAGAAAAACGGCATCGTTTTGCCTAGCTCCGACTTCCAGCGACTCTGCATTCAGCAGCTCGACCTCTTCCGCCGTATCGTCCATCCCGACGCTGTCCTCTCGGTATATGTAAGACCAGCCGGTAGTTATGTGATGGACCGATTAGAGCTGCGTAGAGTGACTTGCTATCCCGGCGTGAATGCATCAGATATTGTGATTTTAGTTGGCAGTTTTAGTGTTGCCACCGGTTTTCGCGCCGCAGAGGCAGTTCTTTCCAATCACAAAGTGGAAGTTATAGCGGAGTGTAAAGCTATGGTTTTTCCTATGGTGAAGCACCCTTTTGTGGTGGGATTCTTGGTTGCTGAGTTACCCAGGATGGAAATACCGTCACCGGGGAGTGTCCTGGGTGAAGGCTGTGATTTGGTTCACTGCCCCACTACTGAGGAAGCCTATGCTTCGCCTCAGGGATCCGATGCCATATCTTGGGATGAGTACTCTTTGGAGAATGAACCGGAACGAGTAGTGACAATGTACAAGTTTAGTGCGGAGCAGAGATCAATTGCTATCAATATTTCTCGGTCTTTAGCTATGGCATATGTTATGGATCAGGTAGTTTACAAGGTTATGGTTCCGATATCTTTGTCTTTTCAAGTCTATCTCATTTTGTTTTTTGGGGGAAATGTTTATCTGTTTCTTATGCAGAAAGCAATGTTACTCCAGCAATCATCGTGGCAGAATAACGTAAGGATGAGCAGTCTAGTTGAGCAGATTCGTGGTCCTCTTTCTAGCATTCGAACTTTGAGTAAAATGTTGTCCATGCATACAAAGAGAAGTGAGATTTCTTATGACATTGTTGAAGATATACTGGTACAAGGCGATCAAGTGAAAGATACCCTTCAGCAACTCCAAGATGCTGTTTACTTGACCAAGGCTAATATTATGCGCTATAGCGAACAAGACTCTACATATGTATATCCTGACGCACGGAGGTCTCAATTATTGAATAACTTGCCAAGTGATAGTTCCAGCATTAAGATGCAAATTTCTGGTGAACAACTTTCTCTAAATGCTCCAACCAAAGATATAGAGATACCGATGCCACCTCTAGCCCTTGCTCCTTTACAGCAAGATGGAATTAGACCATGCAATGTTTCTGATATACTGGTAGATTTGGTAGAAGCTGTAAGACCTCTTGCCCATAACCAGCAGCGTAGAGTAGAACTGAGTGAACTTGGAAAATCTTTGCAAGTAGCTGTAGAAGAACCTGCTTTACGACAGGCTCTGAGCAATTTAATCGAAAGTGCATTATTGCGTACGCATGCTGGGGGAAAGGTAGAAATTGTGTATACTGGAGCTCCAGCAGGTGGTGCTCTTGTAGTAATTGATGACGATGGGCCTGACATGCATTATATGGTAAAAATCACAAACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009593 GO:0009987 GO:0010109 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019222 GO:0019538 GO:0031323 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0048037 GO:0048038 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051775 GO:0051776 GO:0060255 GO:0065007 GO:0071704 GO:0080005 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

No domains found.

Protein Analysis

571

Amino Acids

62.86

Weight (kDa)

5.75

Isoelectric Point (pI)

56.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005687)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67840 AT1G67840
fragaria_vesca	FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g35670
malus_domestica	MD13G1099700.v1.1
prunus_persica	Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1
pyrus_communis	pycom12g22130 pycom13g08710
rosa_chinensis	RchiOBHm_Chr4g0433151
rosa_laevigata	RLG00000006779
rosa_multiflora	Rmu_sc0020880.1_g000001 Rmu_ssc0000295.1_g000015
rosa_roxburghii	Rroxscaffold_5G00374630
rosa_rugosa	Rorug04G0266300 Rorug04G0266400
rosa_samantha	Rh4AG320100 Rh4BG328300 Rh4CG343700 Rh4DG323700
rosa_wichuraiana	Rw4G027790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1634
Acc36I	ACCTGC	2 cut(s)	1555, 1634
AccB7I	CCANNNNNTGG	2 cut(s)	765, 1646
AccI	GTMKAC	2 cut(s)	276, 1628
AccII	CGCG	1 cut(s)	537
AclWI	GGATC	4 cut(s)	299, 744, 757, 894
AcsI	RAATTY	2 cut(s)	40, 1323
AcuI	CTGAAG	1 cut(s)	1163
AdeI	CACNNNGTG	1 cut(s)	568
AfaI	GTAC	4 cut(s)	776, 815, 1152, 1597
AfiI	CCNNNNNNNGG	4 cut(s)	625, 674, 765, 1646
AgeI	ACCGGT	1 cut(s)	527
AgsI	TTSAA	3 cut(s)	932, 1139, 1285
AjiI	CACGTC	1 cut(s)	172
AjnI	CCWGG	2 cut(s)	653, 684
AjuI	GAANNNNNNNTTGG	2 cut(s)	1288, 1320
AluBI	AGCT	8 cut(s)	330, 361, 451, 593, 869, 1463, 1535, 1637
AluI	AGCT	8 cut(s)	330, 361, 451, 593, 869, 1463, 1535, 1637
Alw21I	GWGCWC	2 cut(s)	1639, 1654
Alw26I	GTCTC	1 cut(s)	1278
AlwI	GGATC	4 cut(s)	299, 744, 757, 894
AlwNI	CAGNNNCTG	1 cut(s)	1564
AoxI	GGCC	1 cut(s)	1676
ApeKI	GCWGC	4 cut(s)	14, 358, 451, 1489
ApoI	RAATTY	2 cut(s)	40, 1323
AsiGI	ACCGGT	1 cut(s)	527
AspLEI	GCGC	2 cut(s)	539, 1227
AspS9I	GGNCC	6 cut(s)	196, 220, 301, 439, 1058, 1676
AsuC2I	CCSGG	2 cut(s)	474, 675
AsuHPI	GGTGA	7 cut(s)	17, 110, 166, 622, 663, 701, 1343
AsuII	TTCGAA	1 cut(s)	1075
AvaII	GGWCC	5 cut(s)	196, 220, 301, 439, 1058
AxyI	CCTNAGG	1 cut(s)	744
BamHI	GGATCC	1 cut(s)	749
BanII	GRGCYC	1 cut(s)	1639
Bbv12I	GWGCWC	2 cut(s)	1639, 1654
BbvCI	CCTCAGC	1 cut(s)	108
BbvI	GCAGC	3 cut(s)	370, 438, 1501
BccI	CCATC	7 cut(s)	43, 170, 393, 430, 652, 1406, 1667
BceAI	ACGGC	3 cut(s)	221, 328, 360
BcgI	CGANNNNNNTGC	2 cut(s)	1558, 1592
BciT130I	CCWGG	2 cut(s)	655, 686
BcnI	CCSGG	2 cut(s)	474, 675
BcoDI	GTCTC	1 cut(s)	1278
BfaI	CTAG	4 cut(s)	327, 1040, 1068, 1388
BfmI	CTRYAG	2 cut(s)	1228, 1536
BfuAI	ACCTGC	2 cut(s)	1555, 1634
BglI	GCCNNNNNGGC	1 cut(s)	545
BisI	GCNGC	5 cut(s)	15, 359, 452, 540, 1490
BlsI	GCNGC	5 cut(s)	16, 360, 453, 541, 1491
BmcAI	AGTACT	1 cut(s)	776
Bme1390I	CCNGG	4 cut(s)	474, 655, 675, 686
Bme18I	GGWCC	5 cut(s)	196, 220, 301, 439, 1058
BmgBI	CACGTC	1 cut(s)	172
BmgT120I	GGNCC	6 cut(s)	196, 220, 301, 439, 1058, 1676
BmiI	GGNNCC	4 cut(s)	198, 222, 751, 912
BmrFI	CCNGG	4 cut(s)	474, 655, 675, 686
BmsI	GCATC	8 cut(s)	181, 269, 324, 494, 745, 1183, 1308, 1368
BpmI	CTGGAG	4 cut(s)	125, 983, 1623, 1653
Bpu10I	CCTNAGC	1 cut(s)	108
Bpu14I	TTCGAA	1 cut(s)	1075
BpuMI	CCSGG	2 cut(s)	474, 675
BsaI	GGTCTC	1 cut(s)	1278
BsaJI	CCNNGG	5 cut(s)	216, 653, 674, 685, 1209
BsaWI	WCCGGW	2 cut(s)	527, 793
BsaXI	ACNNNNNCTCC	6 cut(s)	105, 135, 170, 200, 1621, 1651
Bsc4I	CCNNNNNNNGG	4 cut(s)	625, 674, 765, 1646
Bse118I	RCCGGY	2 cut(s)	422, 527
Bse1I	ACTGG	3 cut(s)	1152, 1449, 1636
Bse21I	CCTNAGG	1 cut(s)	744
Bse3DI	GCAATG	2 cut(s)	996, 1435
BseBI	CCWGG	2 cut(s)	655, 686
BseDI	CCNNGG	5 cut(s)	216, 653, 674, 685, 1209
BseGI	GGATG	6 cut(s)	162, 260, 385, 663, 775, 1035
BseLI	CCNNNNNNNGG	4 cut(s)	625, 674, 765, 1646
BseMI	GCAATG	2 cut(s)	996, 1435
BseMII	CTCAG	6 cut(s)	122, 636, 714, 758, 1496, 1556
BseNI	ACTGG	3 cut(s)	1152, 1449, 1636
BseRI	GAGGAG	2 cut(s)	47, 113
BseXI	GCAGC	3 cut(s)	370, 438, 1501
BseYI	CCCAGC	1 cut(s)	1604
Bsh1236I	CGCG	1 cut(s)	537
BshFI	GGCC	1 cut(s)	1678
BshTI	ACCGGT	1 cut(s)	527
BsiHKAI	GWGCWC	2 cut(s)	1639, 1654
BsiSI	CCGG	5 cut(s)	423, 474, 528, 674, 794
BsiWI	CGTACG	1 cut(s)	1595
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	4 cut(s)	625, 674, 765, 1646
BsmAI	GTCTC	1 cut(s)	1278
BsmFI	GGGAC	1 cut(s)	206
BsmI	GAATGC	3 cut(s)	351, 487, 1071
BsnI	GGCC	1 cut(s)	1678
Bso31I	GGTCTC	1 cut(s)	1278
Bsp119I	TTCGAA	1 cut(s)	1075
Bsp1286I	GDGCHC	2 cut(s)	1639, 1654
Bsp1407I	TGTACA	1 cut(s)	813
Bsp143I	GATC	5 cut(s)	291, 749, 836, 886, 1159
Bsp19I	CCATGG	1 cut(s)	216
BspANI	GGCC	1 cut(s)	1678
BspCNI	CTCAG	6 cut(s)	121, 637, 715, 757, 1497, 1557
BspFNI	CGCG	1 cut(s)	537
BspLI	GGNNCC	4 cut(s)	198, 222, 751, 912
BspMI	ACCTGC	2 cut(s)	1555, 1634
BspPI	GGATC	4 cut(s)	299, 744, 757, 894
BspT104I	TTCGAA	1 cut(s)	1075
BspTNI	GGTCTC	1 cut(s)	1278
BsrDI	GCAATG	2 cut(s)	996, 1435
BsrFI	RCCGGY	2 cut(s)	422, 527
BsrGI	TGTACA	1 cut(s)	813
BsrI	ACTGG	3 cut(s)	1152, 1449, 1636
BssAI	RCCGGY	2 cut(s)	422, 527
BssECI	CCNNGG	5 cut(s)	216, 653, 674, 685, 1209
BssMI	GATC	5 cut(s)	291, 749, 836, 886, 1159
BssNAI	GTATAC	1 cut(s)	1629
BssT1I	CCWWGG	2 cut(s)	216, 1209
Bst1107I	GTATAC	1 cut(s)	1629
Bst2UI	CCWGG	2 cut(s)	655, 686
Bst4CI	ACNGT	1 cut(s)	669
Bst6I	CTCTTC	1 cut(s)	374
BstAPI	GCANNNNNTGC	1 cut(s)	1649
BstAUI	TGTACA	1 cut(s)	813
BstBI	TTCGAA	1 cut(s)	1075
BstC8I	GCNNGC	1 cut(s)	1602
BstDEI	CTNAG	6 cut(s)	108, 645, 723, 744, 1505, 1565
BstDSI	CCRYGG	1 cut(s)	216
BstF5I	GGATG	6 cut(s)	162, 260, 385, 663, 775, 1035
BstFNI	CGCG	1 cut(s)	537
BstHHI	GCGC	2 cut(s)	539, 1227
BstKTI	GATC	5 cut(s)	294, 752, 839, 889, 1162
BstMAI	GTCTC	1 cut(s)	1278
BstMBI	GATC	5 cut(s)	291, 749, 836, 886, 1159
BstMWI	GCNNNNNNNGC	4 cut(s)	474, 545, 1649, 1684
BstNI	CCWGG	2 cut(s)	655, 686
BstNSI	RCATGY	2 cut(s)	1604, 1687
BstSCI	CCNGG	4 cut(s)	472, 653, 673, 684
BstSFI	CTRYAG	2 cut(s)	1228, 1536
BstUI	CGCG	1 cut(s)	537
BstV1I	GCAGC	3 cut(s)	370, 438, 1501
BstX2I	RGATCY	1 cut(s)	749
BstYI	RGATCY	1 cut(s)	749
BstZ17I	GTATAC	1 cut(s)	1629
Bsu36I	CCTNAGG	1 cut(s)	744
BsuRI	GGCC	1 cut(s)	1678
BtgI	CCRYGG	1 cut(s)	216
BtrI	CACGTC	1 cut(s)	172
BtsCI	GGATG	6 cut(s)	162, 260, 385, 663, 775, 1035
BtsI	GCAGTG	1 cut(s)	709
BtsIMutI	CAGTG	1 cut(s)	709
BveI	ACCTGC	2 cut(s)	1555, 1634
Cac8I	GCNNGC	1 cut(s)	1602
CaiI	CAGNNNCTG	1 cut(s)	1564
CfoI	GCGC	2 cut(s)	539, 1227
Cfr10I	RCCGGY	2 cut(s)	422, 527
Cfr13I	GGNCC	6 cut(s)	196, 220, 301, 439, 1058, 1676
CseI	GACGC	2 cut(s)	401, 1271
Csp6I	GTAC	4 cut(s)	775, 814, 1151, 1596
CspAI	ACCGGT	1 cut(s)	527
CspCI	CAANNNNNGTGG	2 cut(s)	992, 1027
CviAII	CATG	6 cut(s)	217, 283, 1099, 1425, 1601, 1684
CviQI	GTAC	4 cut(s)	775, 814, 1151, 1596
DdeI	CTNAG	6 cut(s)	108, 645, 723, 744, 1505, 1565
DpnI	GATC	5 cut(s)	293, 751, 838, 888, 1161
DpnII	GATC	5 cut(s)	291, 749, 836, 886, 1159
DraIII	CACNNNGTG	1 cut(s)	568
Eam1104I	CTCTTC	1 cut(s)	374
EarI	CTCTTC	1 cut(s)	374
EciI	GGCGGA	4 cut(s)	155, 217, 223, 362
Ecl136II	GAGCTC	1 cut(s)	1637
Eco130I	CCWWGG	2 cut(s)	216, 1209
Eco24I	GRGCYC	1 cut(s)	1639
Eco31I	GGTCTC	1 cut(s)	1278
Eco32I	GATATC	1 cut(s)	918
Eco47I	GGWCC	5 cut(s)	196, 220, 301, 439, 1058
Eco53kI	GAGCTC	1 cut(s)	1637
Eco57I	CTGAAG	1 cut(s)	1163
Eco81I	CCTNAGG	1 cut(s)	744
EcoICRI	GAGCTC	1 cut(s)	1637
EcoRII	CCWGG	2 cut(s)	653, 684
EcoRV	GATATC	1 cut(s)	918
EcoT14I	CCWWGG	2 cut(s)	216, 1209
EcoT22I	ATGCAT	3 cut(s)	487, 1104, 1689
EcoT38I	GRGCYC	1 cut(s)	1639
ErhI	CCWWGG	2 cut(s)	216, 1209
FaeI	CATG	6 cut(s)	220, 286, 1102, 1428, 1604, 1687
FalI	AAGNNNNNCTT	2 cut(s)	1161, 1193
FaqI	GGGAC	1 cut(s)	206
FatI	CATG	6 cut(s)	216, 282, 1098, 1424, 1600, 1683
FauNDI	CATATG	2 cut(s)	877, 1249
FblI	GTMKAC	2 cut(s)	276, 1628
Fnu4HI	GCNGC	5 cut(s)	15, 359, 452, 540, 1490
FokI	GGATG	6 cut(s)	149, 247, 372, 670, 782, 1042
FriOI	GRGCYC	1 cut(s)	1639
Fsp4HI	GCNGC	5 cut(s)	15, 359, 452, 540, 1490
FspBI	CTAG	4 cut(s)	327, 1040, 1068, 1388
GlaI	GCGC	2 cut(s)	538, 1226
GluI	GCNGC	5 cut(s)	15, 359, 452, 540, 1490
GsaI	CCCAGC	1 cut(s)	1608
GsuI	CTGGAG	4 cut(s)	125, 983, 1623, 1653
HaeIII	GGCC	1 cut(s)	1678
HapII	CCGG	5 cut(s)	423, 474, 528, 674, 794
HgaI	GACGC	2 cut(s)	401, 1271
HhaI	GCGC	2 cut(s)	539, 1227
Hin1II	CATG	6 cut(s)	220, 286, 1102, 1428, 1604, 1687
Hin6I	GCGC	2 cut(s)	537, 1225
HinP1I	GCGC	2 cut(s)	537, 1225
HincII	GTYRAC	1 cut(s)	277
HindII	GTYRAC	1 cut(s)	277
HinfI	GANTC	4 cut(s)	345, 633, 1051, 1241
HpaII	CCGG	5 cut(s)	423, 474, 528, 674, 794
HphI	GGTGA	7 cut(s)	17, 110, 166, 622, 663, 701, 1343
Hpy166II	GTNNAC	7 cut(s)	277, 709, 898, 1201, 1334, 1511, 1629
Hpy188I	TCNGA	7 cut(s)	190, 334, 490, 754, 915, 1438, 1566
Hpy188III	TCNNGA	3 cut(s)	142, 389, 1259
Hpy8I	GTNNAC	7 cut(s)	277, 709, 898, 1201, 1334, 1511, 1629
Hpy99I	CGWCG	3 cut(s)	242, 278, 395
HpyAV	CCTTC	2 cut(s)	686, 1187
HpyCH4III	ACNGT	1 cut(s)	669
HpyCH4IV	ACGT	2 cut(s)	171, 1023
HpyF10VI	GCNNNNNNNGC	4 cut(s)	474, 545, 1649, 1684
HpyF3I	CTNAG	6 cut(s)	108, 645, 723, 744, 1505, 1565
HpySE526I	ACGT	2 cut(s)	171, 1023
Hsp92II	CATG	6 cut(s)	220, 286, 1102, 1428, 1604, 1687
HspAI	GCGC	2 cut(s)	537, 1225
Kzo9I	GATC	5 cut(s)	291, 749, 836, 886, 1159
LmnI	GCTCC	6 cut(s)	335, 829, 1357, 1402, 1634, 1642
Lsp1109I	GCAGC	3 cut(s)	370, 438, 1501
LweI	GCATC	8 cut(s)	181, 269, 324, 494, 745, 1183, 1308, 1368
MaeI	CTAG	4 cut(s)	327, 1040, 1068, 1388
MaeII	ACGT	2 cut(s)	171, 1023
MaeIII	GTNAC	6 cut(s)	172, 460, 648, 669, 805, 993
MalI	GATC	5 cut(s)	293, 751, 838, 888, 1161
MboI	GATC	5 cut(s)	291, 749, 836, 886, 1159
MboII	GAAGA	3 cut(s)	361, 1151, 1553
MfeI	CAATTG	1 cut(s)	840
MflI	RGATCY	1 cut(s)	749
MhlI	GDGCHC	2 cut(s)	1639, 1654
MluCI	AATT	8 cut(s)	40, 840, 1277, 1323, 1416, 1570, 1620, 1662
MlyI	GAGTC	2 cut(s)	339, 1235
MmeI	TCCRAC	2 cut(s)	357, 1379
Mph1103I	ATGCAT	3 cut(s)	487, 1104, 1689
MseI	TTAA	2 cut(s)	1314, 1574
MslI	CAYNNNNRTG	1 cut(s)	1316
MspI	CCGG	5 cut(s)	423, 474, 528, 674, 794
MspR9I	CCNGG	4 cut(s)	474, 655, 675, 686
MunI	CAATTG	1 cut(s)	840
Mva1269I	GAATGC	3 cut(s)	351, 487, 1071
MvaI	CCWGG	2 cut(s)	655, 686
MvnI	CGCG	1 cut(s)	537
MwoI	GCNNNNNNNGC	4 cut(s)	474, 545, 1649, 1684
NciI	CCSGG	2 cut(s)	474, 675
NcoI	CCATGG	1 cut(s)	216
NdeI	CATATG	2 cut(s)	877, 1249
NdeII	GATC	5 cut(s)	291, 749, 836, 886, 1159
NlaIII	CATG	6 cut(s)	220, 286, 1102, 1428, 1604, 1687
NlaIV	GGNNCC	4 cut(s)	198, 222, 751, 912
NmeAIII	GCCGAG	1 cut(s)	281
NmuCI	GTSAC	4 cut(s)	172, 460, 669, 805
NsiI	ATGCAT	3 cut(s)	487, 1104, 1689
NspI	RCATGY	2 cut(s)	1604, 1687
NspV	TTCGAA	1 cut(s)	1075
PaeI	GCATGC	1 cut(s)	1604
PaqCI	CACCTGC	1 cut(s)	1634
PcsI	WCGNNNNNNNCGW	1 cut(s)	387
PctI	GAATGC	3 cut(s)	351, 487, 1071
PfeI	GAWTC	2 cut(s)	633, 1051
Pfl23II	CGTACG	1 cut(s)	1595
PflFI	GACNNNGTC	1 cut(s)	395
PflMI	CCANNNNNTGG	2 cut(s)	765, 1646
PinAI	ACCGGT	1 cut(s)	527
PkrI	GCNGC	5 cut(s)	16, 360, 453, 541, 1491
PleI	GAGTC	2 cut(s)	339, 1235
PpsI	GAGTC	2 cut(s)	339, 1235
Psp124BI	GAGCTC	1 cut(s)	1639
Psp6I	CCWGG	2 cut(s)	653, 684
PspFI	CCCAGC	1 cut(s)	1604
PspGI	CCWGG	2 cut(s)	653, 684
PspLI	CGTACG	1 cut(s)	1595
PspN4I	GGNNCC	4 cut(s)	198, 222, 751, 912
PspPI	GGNCC	6 cut(s)	196, 220, 301, 439, 1058, 1676
PsrI	GAACNNNNNNTAC	2 cut(s)	1536, 1568
PstNI	CAGNNNCTG	1 cut(s)	1564
PsuI	RGATCY	1 cut(s)	749
PsyI	GACNNNGTC	1 cut(s)	395
RsaI	GTAC	4 cut(s)	776, 815, 1152, 1597
RsaNI	GTAC	4 cut(s)	775, 814, 1151, 1596
RseI	CAYNNNNRTG	1 cut(s)	1316
SacI	GAGCTC	1 cut(s)	1639
SalI	GTCGAC	1 cut(s)	275
SaqAI	TTAA	2 cut(s)	1314, 1574
SatI	GCNGC	5 cut(s)	15, 359, 452, 540, 1490
Sau3AI	GATC	5 cut(s)	291, 749, 836, 886, 1159
Sau96I	GGNCC	6 cut(s)	196, 220, 301, 439, 1058, 1676
ScaI	AGTACT	1 cut(s)	776
SchI	GAGTC	2 cut(s)	339, 1235
ScrFI	CCNGG	4 cut(s)	474, 655, 675, 686
SduI	GDGCHC	2 cut(s)	1639, 1654
SfaNI	GCATC	8 cut(s)	181, 269, 324, 494, 745, 1183, 1308, 1368
SfcI	CTRYAG	2 cut(s)	1228, 1536
SfuI	TTCGAA	1 cut(s)	1075
SinI	GGWCC	5 cut(s)	196, 220, 301, 439, 1058
SmiMI	CAYNNNNRTG	1 cut(s)	1316
SphI	GCATGC	1 cut(s)	1604
Sse9I	AATT	8 cut(s)	40, 840, 1277, 1323, 1416, 1570, 1620, 1662
SspI	AATATT	2 cut(s)	853, 1219
SspMI	CTAG	4 cut(s)	327, 1040, 1068, 1388
SstI	GAGCTC	1 cut(s)	1639
StyD4I	CCNGG	4 cut(s)	472, 653, 673, 684
StyI	CCWWGG	2 cut(s)	216, 1209
TaaI	ACNGT	1 cut(s)	669
TaiI	ACGT	2 cut(s)	174, 1026
TaqI	TCGA	5 cut(s)	276, 294, 363, 1075, 1578
TaqII	GACCGA	2 cut(s)	456, 849
TasI	AATT	8 cut(s)	40, 840, 1277, 1323, 1416, 1570, 1620, 1662
TatI	WGTACW	2 cut(s)	774, 813
TauI	GCSGC	1 cut(s)	542
TfiI	GAWTC	2 cut(s)	633, 1051
Tru1I	TTAA	2 cut(s)	1314, 1574
Tru9I	TTAA	2 cut(s)	1314, 1574
TscAI	CASTG	1 cut(s)	716
TseFI	GTSAC	4 cut(s)	172, 460, 669, 805
TseI	GCWGC	4 cut(s)	14, 358, 451, 1489
Tsp45I	GTSAC	4 cut(s)	172, 460, 669, 805
TspDTI	ATGAA	2 cut(s)	271, 804
TspGWI	ACGGA	1 cut(s)	1282
TspRI	CASTG	1 cut(s)	716
Tth111I	GACNNNGTC	1 cut(s)	395
Van91I	CCANNNNNTGG	2 cut(s)	765, 1646
VpaK11BI	GGWCC	5 cut(s)	196, 220, 301, 439, 1058
XapI	RAATTY	2 cut(s)	40, 1323
XceI	RCATGY	2 cut(s)	1604, 1687
XcmI	CCANNNNNNNNNTGG	2 cut(s)	214, 565
XmiI	GTMKAC	2 cut(s)	276, 1628
XspI	CTAG	4 cut(s)	327, 1040, 1068, 1388
ZrmI	AGTACT	1 cut(s)	776
Zsp2I	ATGCAT	3 cut(s)	487, 1104, 1689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.