Histidine kinase-like ATPases
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67840 AT1G67840 |
| fragaria_vesca | FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g25720 FvH4_4g35670 |
| malus_domestica | MD13G1099700.v1.1 |
| prunus_persica | Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 Prupe.1G246300_v2.0.a1 |
| pyrus_communis | pycom12g22130 pycom13g08710 |
| rosa_chinensis | RchiOBHm_Chr4g0433151 |
| rosa_laevigata | RLG00000006779 |
| rosa_multiflora | Rmu_sc0020880.1_g000001 Rmu_ssc0000295.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00374630 |
| rosa_rugosa | Rorug04G0266300 Rorug04G0266400 |
| rosa_samantha | Rh4AG320100 Rh4BG328300 Rh4CG343700 Rh4DG323700 |
| rosa_wichuraiana | Rw4G027790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1577, 1805 |
| Acc36I | ACCTGC | 3 cut(s) | 1498, 1577, 1805 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 710, 1589 |
| AccBSI | CCGCTC | 1 cut(s) | 116 |
| AccI | GTMKAC | 2 cut(s) | 309, 1571 |
| AccII | CGCG | 1 cut(s) | 570 |
| AclWI | GGATC | 3 cut(s) | 413, 831, 930 |
| AcsI | RAATTY | 2 cut(s) | 680, 993 |
| AdeI | CACNNNGTG | 2 cut(s) | 601, 710 |
| AfaI | GTAC | 3 cut(s) | 354, 851, 1540 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 658, 707, 710, 1208, 1240, 1589, 1882 |
| AgsI | TTSAA | 7 cut(s) | 989, 1019, 1082, 1188, 1228, 1403, 1697 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 201 |
| AjiI | CACGTC | 2 cut(s) | 208, 1710 |
| AjnI | CCWGG | 5 cut(s) | 505, 686, 706, 1131, 1862 |
| AluBI | AGCT | 6 cut(s) | 455, 484, 512, 626, 786, 1406 |
| AluI | AGCT | 6 cut(s) | 455, 484, 512, 626, 786, 1406 |
| Alw21I | GWGCWC | 2 cut(s) | 788, 1582 |
| Alw26I | GTCTC | 1 cut(s) | 370 |
| AlwI | GGATC | 3 cut(s) | 413, 831, 930 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 817, 1507 |
| Ama87I | CYCGRG | 1 cut(s) | 1824 |
| AoxI | GGCC | 3 cut(s) | 449, 1619, 1873 |
| ApeKI | GCWGC | 3 cut(s) | 626, 1123, 1432 |
| ApoI | RAATTY | 2 cut(s) | 680, 993 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 985, 1017 |
| AseI | ATTAAT | 1 cut(s) | 1869 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 993 |
| AspLEI | GCGC | 2 cut(s) | 572, 1170 |
| AspS9I | GGNCC | 5 cut(s) | 253, 472, 1001, 1619, 1874 |
| AsuHPI | GGTGA | 7 cut(s) | 17, 133, 655, 737, 1187, 1286, 1776 |
| AvaI | CYCGRG | 1 cut(s) | 1824 |
| AvaII | GGWCC | 3 cut(s) | 253, 472, 1001 |
| AxyI | CCTNAGG | 1 cut(s) | 759 |
| BanII | GRGCYC | 1 cut(s) | 788 |
| BauI | CACGAG | 1 cut(s) | 1740 |
| BbsI | GAAGAC | 1 cut(s) | 1704 |
| Bbv12I | GWGCWC | 2 cut(s) | 788, 1582 |
| BbvI | GCAGC | 3 cut(s) | 613, 1135, 1444 |
| BccI | CCATC | 8 cut(s) | 43, 206, 221, 463, 510, 685, 901, 1610 |
| BceAI | ACGGC | 1 cut(s) | 254 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 407, 441, 480, 514 |
| BciT130I | CCWGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| BciVI | GTATCC | 1 cut(s) | 799 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BcoDI | GTCTC | 1 cut(s) | 370 |
| BfaI | CTAG | 4 cut(s) | 183, 1011, 1158, 1331 |
| BfmI | CTRYAG | 2 cut(s) | 1121, 1479 |
| BfuAI | ACCTGC | 3 cut(s) | 1498, 1577, 1805 |
| BfuI | GTATCC | 1 cut(s) | 799 |
| BisI | GCNGC | 5 cut(s) | 573, 627, 701, 1124, 1433 |
| BlpI | GCTNAGC | 1 cut(s) | 864 |
| BlsI | GCNGC | 5 cut(s) | 574, 628, 702, 1125, 1434 |
| Bme1390I | CCNGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| Bme18I | GGWCC | 3 cut(s) | 253, 472, 1001 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 201 |
| BmeT110I | CYCGRG | 1 cut(s) | 1824 |
| BmgBI | CACGTC | 2 cut(s) | 208, 1710 |
| BmgT120I | GGNCC | 5 cut(s) | 253, 472, 1001, 1619, 1874 |
| BmiI | GGNNCC | 3 cut(s) | 255, 1300, 1669 |
| BmrFI | CCNGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| BmrI | ACTGGG | 1 cut(s) | 1557 |
| BmsI | GCATC | 8 cut(s) | 357, 415, 924, 1126, 1251, 1305, 1635, 1789 |
| BmuI | ACTGGG | 1 cut(s) | 1557 |
| BpiI | GAAGAC | 1 cut(s) | 1704 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1659, 1691, 1818, 1850 |
| BpmI | CTGGAG | 5 cut(s) | 839, 926, 1115, 1317, 1596 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1881 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 864 |
| BsaJI | CCNNGG | 7 cut(s) | 249, 639, 686, 1152, 1239, 1302, 1807 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 95, 125, 206, 236 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 658, 707, 710, 1208, 1240, 1589, 1882 |
| Bse1I | ACTGG | 5 cut(s) | 565, 1095, 1392, 1552, 1579 |
| Bse21I | CCTNAGG | 1 cut(s) | 759 |
| Bse3DI | GCAATG | 2 cut(s) | 1378, 1466 |
| BseBI | CCWGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| BseDI | CCNNGG | 7 cut(s) | 249, 639, 686, 1152, 1239, 1302, 1807 |
| BseGI | GGATG | 5 cut(s) | 198, 502, 696, 978, 1141 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 658, 707, 710, 1208, 1240, 1589, 1882 |
| BseMI | GCAATG | 2 cut(s) | 1378, 1466 |
| BseMII | CTCAG | 5 cut(s) | 750, 855, 1221, 1232, 1499 |
| BseNI | ACTGG | 5 cut(s) | 565, 1095, 1392, 1552, 1579 |
| BseRI | GAGGAG | 5 cut(s) | 47, 151, 422, 929, 1317 |
| BseXI | GCAGC | 3 cut(s) | 613, 1135, 1444 |
| BseYI | CCCAGC | 1 cut(s) | 359 |
| Bsh1236I | CGCG | 1 cut(s) | 570 |
| BshFI | GGCC | 3 cut(s) | 451, 1621, 1875 |
| BsiHKAI | GWGCWC | 2 cut(s) | 788, 1582 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1824 |
| BslFI | GGGAC | 1 cut(s) | 239 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 658, 707, 710, 1208, 1240, 1589, 1882 |
| BsmAI | GTCTC | 1 cut(s) | 370 |
| BsmFI | GGGAC | 1 cut(s) | 239 |
| BsmI | GAATGC | 1 cut(s) | 1648 |
| BsnI | GGCC | 3 cut(s) | 451, 1621, 1875 |
| BsoBI | CYCGRG | 1 cut(s) | 1824 |
| Bsp1286I | GDGCHC | 2 cut(s) | 788, 1582 |
| Bsp1407I | TGTACA | 1 cut(s) | 849 |
| Bsp143I | GATC | 6 cut(s) | 138, 418, 823, 872, 922, 1672 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 864 |
| Bsp19I | CCATGG | 2 cut(s) | 249, 639 |
| BspANI | GGCC | 3 cut(s) | 451, 1621, 1875 |
| BspCNI | CTCAG | 5 cut(s) | 751, 856, 1220, 1231, 1500 |
| BspFNI | CGCG | 1 cut(s) | 570 |
| BspLI | GGNNCC | 3 cut(s) | 255, 1300, 1669 |
| BspMAI | CTGCAG | 1 cut(s) | 1125 |
| BspMI | ACCTGC | 3 cut(s) | 1498, 1577, 1805 |
| BspPI | GGATC | 3 cut(s) | 413, 831, 930 |
| BsrBI | CCGCTC | 1 cut(s) | 116 |
| BsrDI | GCAATG | 2 cut(s) | 1378, 1466 |
| BsrGI | TGTACA | 1 cut(s) | 849 |
| BsrI | ACTGG | 5 cut(s) | 565, 1095, 1392, 1552, 1579 |
| BssECI | CCNNGG | 7 cut(s) | 249, 639, 686, 1152, 1239, 1302, 1807 |
| BssMI | GATC | 6 cut(s) | 138, 418, 823, 872, 922, 1672 |
| BssSI | CACGAG | 1 cut(s) | 1740 |
| BssT1I | CCWWGG | 6 cut(s) | 249, 639, 1152, 1239, 1302, 1807 |
| Bst2BI | CACGAG | 1 cut(s) | 1740 |
| Bst2UI | CCWGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| Bst4CI | ACNGT | 3 cut(s) | 393, 1175, 1735 |
| Bst6I | CTCTTC | 2 cut(s) | 335, 1046 |
| BstAUI | TGTACA | 1 cut(s) | 849 |
| BstC8I | GCNNGC | 1 cut(s) | 453 |
| BstDEI | CTNAG | 7 cut(s) | 513, 759, 864, 1207, 1218, 1508, 1881 |
| BstDSI | CCRYGG | 2 cut(s) | 249, 639 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1206, 1238 |
| BstF5I | GGATG | 5 cut(s) | 198, 502, 696, 978, 1141 |
| BstFNI | CGCG | 1 cut(s) | 570 |
| BstHHI | GCGC | 2 cut(s) | 572, 1170 |
| BstKTI | GATC | 6 cut(s) | 141, 421, 826, 875, 925, 1675 |
| BstMAI | GTCTC | 1 cut(s) | 370 |
| BstMBI | GATC | 6 cut(s) | 138, 418, 823, 872, 922, 1672 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 578, 943, 1627, 1886 |
| BstNI | CCWGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| BstSCI | CCNGG | 5 cut(s) | 505, 686, 706, 1131, 1862 |
| BstSFI | CTRYAG | 2 cut(s) | 1121, 1479 |
| BstUI | CGCG | 1 cut(s) | 570 |
| BstV1I | GCAGC | 3 cut(s) | 613, 1135, 1444 |
| BstV2I | GAAGAC | 1 cut(s) | 1704 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 250, 1309 |
| Bsu36I | CCTNAGG | 1 cut(s) | 759 |
| BsuI | GTATCC | 1 cut(s) | 799 |
| BsuRI | GGCC | 3 cut(s) | 451, 1621, 1875 |
| BtgI | CCRYGG | 2 cut(s) | 249, 639 |
| BtgZI | GCGATG | 2 cut(s) | 920, 947 |
| BtrI | CACGTC | 2 cut(s) | 208, 1710 |
| BtsCI | GGATG | 5 cut(s) | 198, 502, 696, 978, 1141 |
| BtsI | GCAGTG | 1 cut(s) | 588 |
| BtsIMutI | CAGTG | 4 cut(s) | 556, 558, 588, 728 |
| BveI | ACCTGC | 3 cut(s) | 1498, 1577, 1805 |
| Cac8I | GCNNGC | 1 cut(s) | 453 |
| CaiI | CAGNNNCTG | 2 cut(s) | 817, 1507 |
| CfoI | GCGC | 2 cut(s) | 572, 1170 |
| Cfr13I | GGNCC | 5 cut(s) | 253, 472, 1001, 1619, 1874 |
| CseI | GACGC | 1 cut(s) | 1648 |
| CsiI | ACCWGGT | 1 cut(s) | 706 |
| Csp6I | GTAC | 3 cut(s) | 353, 850, 1539 |
| CviQI | GTAC | 3 cut(s) | 353, 850, 1539 |
| DdeI | CTNAG | 7 cut(s) | 513, 759, 864, 1207, 1218, 1508, 1881 |
| DpnI | GATC | 6 cut(s) | 140, 420, 825, 874, 924, 1674 |
| DpnII | GATC | 6 cut(s) | 138, 418, 823, 872, 922, 1672 |
| DraIII | CACNNNGTG | 2 cut(s) | 601, 710 |
| DriI | GACNNNNNGTC | 1 cut(s) | 201 |
| Eam1104I | CTCTTC | 2 cut(s) | 335, 1046 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 201 |
| EarI | CTCTTC | 2 cut(s) | 335, 1046 |
| EciI | GGCGGA | 3 cut(s) | 256, 268, 1406 |
| Ecl136II | GAGCTC | 1 cut(s) | 786 |
| Eco130I | CCWWGG | 6 cut(s) | 249, 639, 1152, 1239, 1302, 1807 |
| Eco24I | GRGCYC | 1 cut(s) | 788 |
| Eco47I | GGWCC | 3 cut(s) | 253, 472, 1001 |
| Eco53kI | GAGCTC | 1 cut(s) | 786 |
| Eco81I | CCTNAGG | 1 cut(s) | 759 |
| Eco88I | CYCGRG | 1 cut(s) | 1824 |
| EcoICRI | GAGCTC | 1 cut(s) | 786 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1206, 1238 |
| EcoRII | CCWGG | 5 cut(s) | 505, 686, 706, 1131, 1862 |
| EcoT14I | CCWWGG | 6 cut(s) | 249, 639, 1152, 1239, 1302, 1807 |
| EcoT22I | ATGCAT | 2 cut(s) | 1047, 1650 |
| EcoT38I | GRGCYC | 1 cut(s) | 788 |
| ErhI | CCWWGG | 6 cut(s) | 249, 639, 1152, 1239, 1302, 1807 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 570, 602, 638, 670 |
| FaqI | GGGAC | 1 cut(s) | 239 |
| FauI | CCCGC | 1 cut(s) | 94 |
| FauNDI | CATATG | 3 cut(s) | 913, 1047, 1107 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| FblI | GTMKAC | 2 cut(s) | 309, 1571 |
| Fnu4HI | GCNGC | 5 cut(s) | 573, 627, 701, 1124, 1433 |
| FokI | GGATG | 5 cut(s) | 185, 489, 703, 985, 1148 |
| FriOI | GRGCYC | 1 cut(s) | 788 |
| Fsp4HI | GCNGC | 5 cut(s) | 573, 627, 701, 1124, 1433 |
| FspBI | CTAG | 4 cut(s) | 183, 1011, 1158, 1331 |
| GlaI | GCGC | 2 cut(s) | 571, 1169 |
| GluI | GCNGC | 5 cut(s) | 573, 627, 701, 1124, 1433 |
| GsaI | CCCAGC | 1 cut(s) | 363 |
| GsuI | CTGGAG | 5 cut(s) | 839, 926, 1115, 1317, 1596 |
| HaeIII | GGCC | 3 cut(s) | 451, 1621, 1875 |
| HgaI | GACGC | 1 cut(s) | 1648 |
| HhaI | GCGC | 2 cut(s) | 572, 1170 |
| Hin6I | GCGC | 2 cut(s) | 570, 1168 |
| HinP1I | GCGC | 2 cut(s) | 570, 1168 |
| HincII | GTYRAC | 1 cut(s) | 310 |
| HindII | GTYRAC | 1 cut(s) | 310 |
| HinfI | GANTC | 8 cut(s) | 324, 378, 411, 742, 754, 814, 1184, 1205 |
| HphI | GGTGA | 7 cut(s) | 17, 133, 655, 737, 1187, 1286, 1776 |
| Hpy166II | GTNNAC | 6 cut(s) | 310, 1144, 1178, 1277, 1541, 1572 |
| Hpy188I | TCNGA | 7 cut(s) | 226, 523, 783, 927, 1381, 1509, 1684 |
| Hpy188III | TCNNGA | 9 cut(s) | 136, 373, 422, 758, 818, 970, 1202, 1742, 1883 |
| Hpy8I | GTNNAC | 6 cut(s) | 310, 1144, 1178, 1277, 1541, 1572 |
| Hpy99I | CGWCG | 4 cut(s) | 275, 311, 419, 492 |
| HpyAV | CCTTC | 3 cut(s) | 160, 1025, 1244 |
| HpyCH4III | ACNGT | 3 cut(s) | 393, 1175, 1735 |
| HpyCH4IV | ACGT | 2 cut(s) | 207, 1709 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 578, 943, 1627, 1886 |
| HpyF3I | CTNAG | 7 cut(s) | 513, 759, 864, 1207, 1218, 1508, 1881 |
| HpySE526I | ACGT | 2 cut(s) | 207, 1709 |
| HspAI | GCGC | 2 cut(s) | 570, 1168 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| Kzo9I | GATC | 6 cut(s) | 138, 418, 823, 872, 922, 1672 |
| Lsp1109I | GCAGC | 3 cut(s) | 613, 1135, 1444 |
| LweI | GCATC | 8 cut(s) | 357, 415, 924, 1126, 1251, 1305, 1635, 1789 |
| MabI | ACCWGGT | 1 cut(s) | 706 |
| MaeI | CTAG | 4 cut(s) | 183, 1011, 1158, 1331 |
| MaeII | ACGT | 2 cut(s) | 207, 1709 |
| MaeIII | GTNAC | 3 cut(s) | 203, 208, 493 |
| MalI | GATC | 6 cut(s) | 140, 420, 825, 874, 924, 1674 |
| MbiI | CCGCTC | 1 cut(s) | 116 |
| MboI | GATC | 6 cut(s) | 138, 418, 823, 872, 922, 1672 |
| MboII | GAAGA | 5 cut(s) | 352, 1063, 1094, 1496, 1709 |
| MhlI | GDGCHC | 2 cut(s) | 788, 1582 |
| MlyI | GAGTC | 3 cut(s) | 372, 748, 1199 |
| MmeI | TCCRAC | 1 cut(s) | 375 |
| Mph1103I | ATGCAT | 2 cut(s) | 1047, 1650 |
| MroXI | GAANNNNTTC | 1 cut(s) | 993 |
| MseI | TTAA | 6 cut(s) | 842, 1025, 1148, 1257, 1517, 1869 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1046, 1259 |
| MspA1I | CMGCKG | 1 cut(s) | 455 |
| MspR9I | CCNGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| Mva1269I | GAATGC | 1 cut(s) | 1648 |
| MvaI | CCWGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| MvnI | CGCG | 1 cut(s) | 570 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 578, 943, 1627, 1886 |
| NcoI | CCATGG | 2 cut(s) | 249, 639 |
| NdeI | CATATG | 3 cut(s) | 913, 1047, 1107 |
| NdeII | GATC | 6 cut(s) | 138, 418, 823, 872, 922, 1672 |
| NlaIV | GGNNCC | 3 cut(s) | 255, 1300, 1669 |
| NmeAIII | GCCGAG | 1 cut(s) | 640 |
| NmuCI | GTSAC | 2 cut(s) | 203, 208 |
| NsiI | ATGCAT | 2 cut(s) | 1047, 1650 |
| PaeR7I | CTCGAG | 1 cut(s) | 1824 |
| PaqCI | CACCTGC | 2 cut(s) | 1577, 1805 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 420 |
| PctI | GAATGC | 1 cut(s) | 1648 |
| PdmI | GAANNNNTTC | 1 cut(s) | 993 |
| PfeI | GAWTC | 5 cut(s) | 324, 411, 742, 814, 1184 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 710, 1589 |
| PfoI | TCCNGGA | 3 cut(s) | 505, 1131, 1862 |
| PkrI | GCNGC | 5 cut(s) | 574, 628, 702, 1125, 1434 |
| PleI | GAGTC | 3 cut(s) | 372, 748, 1199 |
| PpsI | GAGTC | 3 cut(s) | 372, 748, 1199 |
| PshBI | ATTAAT | 1 cut(s) | 1869 |
| Psp124BI | GAGCTC | 1 cut(s) | 788 |
| Psp6I | CCWGG | 5 cut(s) | 505, 686, 706, 1131, 1862 |
| PspFI | CCCAGC | 1 cut(s) | 359 |
| PspGI | CCWGG | 5 cut(s) | 505, 686, 706, 1131, 1862 |
| PspN4I | GGNNCC | 3 cut(s) | 255, 1300, 1669 |
| PspPI | GGNCC | 5 cut(s) | 253, 472, 1001, 1619, 1874 |
| PspXI | VCTCGAGB | 1 cut(s) | 1824 |
| PstI | CTGCAG | 1 cut(s) | 1125 |
| PstNI | CAGNNNCTG | 2 cut(s) | 817, 1507 |
| PvuII | CAGCTG | 1 cut(s) | 455 |
| RsaI | GTAC | 3 cut(s) | 354, 851, 1540 |
| RsaNI | GTAC | 3 cut(s) | 353, 850, 1539 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1046, 1259 |
| SacI | GAGCTC | 1 cut(s) | 788 |
| SalI | GTCGAC | 1 cut(s) | 308 |
| SaqAI | TTAA | 6 cut(s) | 842, 1025, 1148, 1257, 1517, 1869 |
| SatI | GCNGC | 5 cut(s) | 573, 627, 701, 1124, 1433 |
| Sau3AI | GATC | 6 cut(s) | 138, 418, 823, 872, 922, 1672 |
| Sau96I | GGNCC | 5 cut(s) | 253, 472, 1001, 1619, 1874 |
| SchI | GAGTC | 3 cut(s) | 372, 748, 1199 |
| ScrFI | CCNGG | 5 cut(s) | 507, 688, 708, 1133, 1864 |
| SduI | GDGCHC | 2 cut(s) | 788, 1582 |
| SexAI | ACCWGGT | 1 cut(s) | 706 |
| SfaNI | GCATC | 8 cut(s) | 357, 415, 924, 1126, 1251, 1305, 1635, 1789 |
| SfcI | CTRYAG | 2 cut(s) | 1121, 1479 |
| Sfr274I | CTCGAG | 1 cut(s) | 1824 |
| SinI | GGWCC | 3 cut(s) | 253, 472, 1001 |
| SlaI | CTCGAG | 1 cut(s) | 1824 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1046, 1259 |
| SmlI | CTYRAG | 1 cut(s) | 1824 |
| SmoI | CTYRAG | 1 cut(s) | 1824 |
| SspMI | CTAG | 4 cut(s) | 183, 1011, 1158, 1331 |
| SstI | GAGCTC | 1 cut(s) | 788 |
| StyD4I | CCNGG | 5 cut(s) | 505, 686, 706, 1131, 1862 |
| StyI | CCWWGG | 6 cut(s) | 249, 639, 1152, 1239, 1302, 1807 |
| TaaI | ACNGT | 3 cut(s) | 393, 1175, 1735 |
| TaiI | ACGT | 2 cut(s) | 210, 1712 |
| TaqI | TCGA | 6 cut(s) | 309, 327, 417, 490, 1752, 1825 |
| TaqII | GACCGA | 2 cut(s) | 489, 885 |
| TatI | WGTACW | 1 cut(s) | 849 |
| TauI | GCSGC | 2 cut(s) | 575, 703 |
| TfiI | GAWTC | 5 cut(s) | 324, 411, 742, 814, 1184 |
| Tru1I | TTAA | 6 cut(s) | 842, 1025, 1148, 1257, 1517, 1869 |
| Tru9I | TTAA | 6 cut(s) | 842, 1025, 1148, 1257, 1517, 1869 |
| TscAI | CASTG | 4 cut(s) | 556, 565, 588, 728 |
| TseFI | GTSAC | 2 cut(s) | 203, 208 |
| TseI | GCWGC | 3 cut(s) | 626, 1123, 1432 |
| Tsp45I | GTSAC | 2 cut(s) | 203, 208 |
| TspDTI | ATGAA | 4 cut(s) | 304, 1064, 1124, 1467 |
| TspGWI | ACGGA | 3 cut(s) | 82, 191, 1763 |
| TspRI | CASTG | 4 cut(s) | 556, 565, 588, 728 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 710, 1589 |
| VpaK11BI | GGWCC | 3 cut(s) | 253, 472, 1001 |
| VspI | ATTAAT | 1 cut(s) | 1869 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1206, 1238 |
| XapI | RAATTY | 2 cut(s) | 680, 993 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 598 |
| XhoI | CTCGAG | 1 cut(s) | 1824 |
| XmiI | GTMKAC | 2 cut(s) | 309, 1571 |
| XmnI | GAANNNNTTC | 1 cut(s) | 993 |
| XspI | CTAG | 4 cut(s) | 183, 1011, 1158, 1331 |
| Zsp2I | ATGCAT | 2 cut(s) | 1047, 1650 |