MD13G1106500.v1.1

ultraviolet-B receptor UVR8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0002099
Physical Location & Seq
Reverse (-)
7632870 .. 7637153
4284 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1106500.v1.1.491

Sequence Viewer

Length: 1605 bp
ATGGATGCCACTGCAAGCGGAACCCCAACTATACAATACCATAACATTCCTGACCAGCCAATTACCACTATTGTTGCCACTCCTGTACCAACATTTGAAAGGCGGCAACGCCATTGCTTCGGGACCTCCACCCCCGGAGAGTTCCCTTTAGCTGCAAACCCCTCCATTGTCCTCCATGTCCTTACTGCCTGCAATTTGGATCCTCAAGACCTTGCAAAGTTAGAGGCAACATGTTCCTTTTTTAGGCATCCTGCGCACTTTGCTCCTGACTTTGAATTGTCCATATCGGAGCTTGCTGCTCTGGACATGTGCCGAAAAAGAGCTATATTTAAGCCAATGACAGCCGAACAGCGTCAAGAATTGAAGCAAAGATGTGGGGGTTCATGGAAACTTGTCCTGAGGTTTTTGTTGGCTGGAGAGGCATGTTACCGAAGGGAGAAATCACAGGCAATAGCAGGGCCTGGTCACAGCATTGCTGTGACTTCGAAAGGAACTGTCTACTCATTTGGCTCAAACAGCTCAGGACAGCTCGGACATGGCACAACTGAAGAGGAATGCCGGCCTAGGCCAATCAGATCTCTGCAAGGCACTCGAATTATTCACGCGACTACTGGGGCTGGCAGGACAATGCTGATCAGTGACGCTGGGAAAGTTTATGCCTTTGGAAAGGACTCTTTTGGCGAAACTGAGTACGGGGTTCAAGGATCAAATCTTGTTACCACTCCACAGTTGGTTGAGTCTTTGAAAGACATATTTGTGGTACAAGCTGCAATTGCAAATTTCTTCACAGCTGTGTTGTCAAGAGAGGGCAGGGTGTATACATTTTCTTGGGGCAACGATGGCAAACTTGGTCACCAAACTGAGCCAACTGATGTTGAGCCCCATCCTTTATTGGGGGCACTTGAGAATGTACCTGTGGTGCAAATTGCAGCTGGATACTGCTACCTTCTTGCTCTGGCTTGTCAACCTAATGGCATGTCAGTTTACTCTGTTGGCTGTGGCTTGGGTGGGAAGCTTGGACACGGTTCAAGAACTGATGAGAAGCACCCCCGACTTATTGAACAATTTCAGGTTTTGAACCTTCAGCCAATGGTGGTTGCTGCCGGAGCTTGGCATGCTGCTGTGGTGGGGCAGGATGGACGTGTCTGCACCTGGGGTTGGGGCCGTTATGGCTGCTTGGGTCACGGGAATGAAGAATGTGAATCAGTTCCCAAGGTTGTGGAAGCATTGAGCCAGGTGAAGGCGGTGCACGTTGCTACAGGGGATTACACAACCTTTGTGGTTTCAGATGTCGGTGATGTGTACTCATTTGGTTGTGGAGAATCAGCTAGTCTTGGACATAGTACTGCTGCCGATGGACAGGGAAATAGGCATGCAAATGTGTTGGCACCAGAGCTAGTGACATCGCTGAAGCAAGTGAATGAGCGGGTTGTACAGATCAGTCTCACCAATTCCATATACTGGAACGCCCACACTTTCGCACTAACCGAATCAGGGAAGCTATACGCATTTGGGGCCGGAGACAAAGGGCAACTAGGCATTGAACTTGTTGCCAACCAGACAGAAAGGGGAAAGCCAGAGCTGGTCGATATTGATCTCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RCC1

Protein Analysis

535

Amino Acids

57.46

Weight (kDa)

6.23

Isoelectric Point (pI)

31.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 148 - 481 2.2e-60 RCC1-like domain
RCC1_2 PF13540 152 - 176 7.4e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 163 - 212 2.5e-12 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 269 - 318 6.3e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 327 - 376 3.5e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 379 - 428 2.4e-15 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 255
AccB1I GGYRCC 1 cut(s) 1387
AccB7I CCANNNNNTGG 1 cut(s) 1461
AccBSI CCGCTC 1 cut(s) 1426
AccI GTMKAC 2 cut(s) 498, 818
AccII CGCG 1 cut(s) 605
AciI CCGC 4 cut(s) 18, 103, 1244, 1426
AclWI GGATC 3 cut(s) 194, 207, 712
AcsI RAATTY 1 cut(s) 778
AcuI CTGAAG 3 cut(s) 567, 1067, 1430
AfaI GTAC 7 cut(s) 87, 692, 762, 912, 1304, 1345, 1434
AfiI CCNNNNNNNGG 7 cut(s) 243, 893, 1110, 1158, 1240, 1461, 1494
AflIII ACRYGT 3 cut(s) 230, 306, 1141
AgsI TTSAA 9 cut(s) 98, 275, 364, 701, 745, 1029, 1061, 1078, 1544
AjiI CACGTC 1 cut(s) 1142
AjnI CCWGG 3 cut(s) 460, 1151, 1233
AleI CACNNNNGTG 1 cut(s) 791
Alw21I GWGCWC 1 cut(s) 1251
Alw26I GTCTC 2 cut(s) 1448, 1515
Alw44I GTGCAC 1 cut(s) 1247
AlwI GGATC 3 cut(s) 194, 207, 712
AlwNI CAGNNNCTG 1 cut(s) 461
AoxI GGCC 5 cut(s) 458, 560, 566, 1162, 1515
ApaLI GTGCAC 1 cut(s) 1247
ApeKI GCWGC 8 cut(s) 152, 296, 767, 929, 1100, 1118, 1173, 1349
ApoI RAATTY 1 cut(s) 778
Asp700I GAANNNNTTC 2 cut(s) 1065, 1206
AspA2I CCTAGG 1 cut(s) 563
AspLEI GCGC 1 cut(s) 256
AspS9I GGNCC 4 cut(s) 123, 458, 1162, 1515
AsuC2I CCSGG 1 cut(s) 135
AsuHPI GGTGA 4 cut(s) 845, 1249, 1307, 1438
AsuII TTCGAA 1 cut(s) 485
AvaII GGWCC 1 cut(s) 123
AvrII CCTAGG 1 cut(s) 563
AxyI CCTNAGG 1 cut(s) 398
BaeGI GKGCMC 2 cut(s) 901, 1251
BaeI ACNNNNGTAYC 2 cut(s) 69, 102
BamHI GGATCC 1 cut(s) 199
BanI GGYRCC 1 cut(s) 1387
BanII GRGCYC 1 cut(s) 882
Bbv12I GWGCWC 1 cut(s) 1251
BbvI GCAGC 8 cut(s) 139, 283, 754, 941, 1087, 1105, 1160, 1336
BccI CCATC 4 cut(s) 833, 891, 1130, 1349
BceAI ACGGC 1 cut(s) 1149
BcgI CGANNNNNNTGC 2 cut(s) 572, 606
BciT130I CCWGG 3 cut(s) 462, 1153, 1235
BciVI GTATCC 1 cut(s) 929
BclI TGATCA 1 cut(s) 633
BcnI CCSGG 1 cut(s) 135
BcoDI GTCTC 2 cut(s) 1448, 1515
BfaI CTAG 4 cut(s) 564, 1329, 1397, 1535
BfmI CTRYAG 1 cut(s) 1257
BfuI GTATCC 1 cut(s) 929
BglI GCCNNNNNGGC 1 cut(s) 1170
BglII AGATCT 1 cut(s) 575
BisI GCNGC 9 cut(s) 104, 153, 297, 768, 930, 1101, 1119, 1174, 1350
BlnI CCTAGG 1 cut(s) 563
BlsI GCNGC 9 cut(s) 105, 154, 298, 769, 931, 1102, 1120, 1175, 1351
BmcAI AGTACT 1 cut(s) 1345
Bme1390I CCNGG 4 cut(s) 135, 462, 1153, 1235
Bme18I GGWCC 1 cut(s) 123
BmgBI CACGTC 1 cut(s) 1142
BmgT120I GGNCC 4 cut(s) 123, 458, 1162, 1515
BmiI GGNNCC 6 cut(s) 22, 124, 201, 1163, 1389, 1516
BmrFI CCNGG 4 cut(s) 135, 462, 1153, 1235
BmrI ACTGGG 1 cut(s) 621
BmsI GCATC 1 cut(s) 256
BmuI ACTGGG 1 cut(s) 621
BpmI CTGGAG 1 cut(s) 435
Bpu10I CCTNAGC 1 cut(s) 520
Bpu14I TTCGAA 1 cut(s) 485
BpuEI CTTGAG 2 cut(s) 189, 923
BpuMI CCSGG 1 cut(s) 135
BsaBI GATNNNNATC 1 cut(s) 1593
BsaJI CCNNGG 4 cut(s) 133, 563, 1152, 1212
Bsc4I CCNNNNNNNGG 7 cut(s) 243, 893, 1110, 1158, 1240, 1461, 1494
Bse118I RCCGGY 1 cut(s) 558
Bse1I ACTGG 2 cut(s) 616, 1466
Bse21I CCTNAGG 1 cut(s) 398
Bse3DI GCAATG 2 cut(s) 112, 471
Bse8I GATNNNNATC 1 cut(s) 1593
BseBI CCWGG 3 cut(s) 462, 1153, 1235
BseDI CCNNGG 4 cut(s) 133, 563, 1152, 1212
BseGI GGATG 4 cut(s) 10, 247, 883, 1141
BseJI GATNNNNATC 1 cut(s) 1593
BseLI CCNNNNNNNGG 7 cut(s) 243, 893, 1110, 1158, 1240, 1461, 1494
BseMI GCAATG 2 cut(s) 112, 471
BseMII CTCAG 4 cut(s) 389, 534, 678, 852
BseNI ACTGG 2 cut(s) 616, 1466
BseSI GKGCMC 2 cut(s) 901, 1251
BseXI GCAGC 8 cut(s) 139, 283, 754, 941, 1087, 1105, 1160, 1336
BseYI CCCAGC 1 cut(s) 644
BsgI GTGCAG 1 cut(s) 1132
Bsh1236I CGCG 1 cut(s) 605
BshFI GGCC 5 cut(s) 460, 562, 568, 1164, 1517
BshNI GGYRCC 1 cut(s) 1387
BsiHKAI GWGCWC 1 cut(s) 1251
BsiSI CCGG 4 cut(s) 135, 559, 1104, 1518
BslFI GGGAC 1 cut(s) 136
BslI CCNNNNNNNGG 7 cut(s) 243, 893, 1110, 1158, 1240, 1461, 1494
BsmAI GTCTC 2 cut(s) 1448, 1515
BsmFI GGGAC 1 cut(s) 136
BsmI GAATGC 1 cut(s) 560
BsnI GGCC 5 cut(s) 460, 562, 568, 1164, 1517
Bsp119I TTCGAA 1 cut(s) 485
Bsp1286I GDGCHC 3 cut(s) 882, 901, 1251
Bsp1407I TGTACA 1 cut(s) 1432
Bsp143I GATC 6 cut(s) 199, 575, 633, 704, 1437, 1594
BspACI CCGC 4 cut(s) 18, 103, 1244, 1426
BspANI GGCC 5 cut(s) 460, 562, 568, 1164, 1517
BspCNI CTCAG 4 cut(s) 390, 533, 679, 853
BspFNI CGCG 1 cut(s) 605
BspLI GGNNCC 6 cut(s) 22, 124, 201, 1163, 1389, 1516
BspPI GGATC 3 cut(s) 194, 207, 712
BspT104I TTCGAA 1 cut(s) 485
BspT107I GGYRCC 1 cut(s) 1387
BsrBI CCGCTC 1 cut(s) 1426
BsrDI GCAATG 2 cut(s) 112, 471
BsrFI RCCGGY 1 cut(s) 558
BsrGI TGTACA 1 cut(s) 1432
BsrI ACTGG 2 cut(s) 616, 1466
BssAI RCCGGY 1 cut(s) 558
BssECI CCNNGG 4 cut(s) 133, 563, 1152, 1212
BssMI GATC 6 cut(s) 199, 575, 633, 704, 1437, 1594
BssNAI GTATAC 1 cut(s) 819
BssT1I CCWWGG 2 cut(s) 563, 1212
Bst1107I GTATAC 1 cut(s) 819
Bst2UI CCWGG 3 cut(s) 462, 1153, 1235
Bst4CI ACNGT 3 cut(s) 496, 729, 1025
Bst6I CTCTTC 1 cut(s) 543
BstAUI TGTACA 1 cut(s) 1432
BstBI TTCGAA 1 cut(s) 485
BstC8I GCNNGC 7 cut(s) 16, 190, 294, 560, 619, 1116, 1374
BstDEI CTNAG 5 cut(s) 398, 520, 687, 861, 1598
BstEII GGTNACC 1 cut(s) 851
BstENI CCTNNNNNAGG 1 cut(s) 241
BstF5I GGATG 4 cut(s) 10, 247, 883, 1141
BstFNI CGCG 1 cut(s) 605
BstHHI GCGC 1 cut(s) 256
BstKTI GATC 6 cut(s) 202, 578, 636, 707, 1440, 1597
BstMAI GTCTC 2 cut(s) 1448, 1515
BstMBI GATC 6 cut(s) 199, 575, 633, 704, 1437, 1594
BstNI CCWGG 3 cut(s) 462, 1153, 1235
BstNSI RCATGY 6 cut(s) 234, 310, 426, 979, 1118, 1376
BstPI GGTNACC 1 cut(s) 851
BstSCI CCNGG 4 cut(s) 133, 460, 1151, 1233
BstSFI CTRYAG 1 cut(s) 1257
BstSLI GKGCMC 2 cut(s) 901, 1251
BstUI CGCG 1 cut(s) 605
BstV1I GCAGC 8 cut(s) 139, 283, 754, 941, 1087, 1105, 1160, 1336
BstX2I RGATCY 2 cut(s) 199, 575
BstXI CCANNNNNNTGG 1 cut(s) 1219
BstYI RGATCY 2 cut(s) 199, 575
BstZ17I GTATAC 1 cut(s) 819
Bsu36I CCTNAGG 1 cut(s) 398
BsuI GTATCC 1 cut(s) 929
BsuRI GGCC 5 cut(s) 460, 562, 568, 1164, 1517
BtgZI GCGATG 1 cut(s) 1389
BtrI CACGTC 1 cut(s) 1142
BtsCI GGATG 4 cut(s) 10, 247, 883, 1141
BtsI GCAGTG 1 cut(s) 9
BtsIMutI CAGTG 2 cut(s) 9, 643
Cac8I GCNNGC 7 cut(s) 16, 190, 294, 560, 619, 1116, 1374
CaiI CAGNNNCTG 1 cut(s) 461
CfoI GCGC 1 cut(s) 256
Cfr10I RCCGGY 1 cut(s) 558
Cfr13I GGNCC 4 cut(s) 123, 458, 1162, 1515
CseI GACGC 2 cut(s) 341, 650
Csp6I GTAC 7 cut(s) 86, 691, 761, 911, 1303, 1344, 1433
CspCI CAANNNNNGTGG 4 cut(s) 55, 90, 1260, 1295
CviAII CATG 9 cut(s) 176, 231, 307, 384, 423, 536, 976, 1115, 1373
CviQI GTAC 7 cut(s) 86, 691, 761, 911, 1303, 1344, 1433
DdeI CTNAG 5 cut(s) 398, 520, 687, 861, 1598
DpnI GATC 6 cut(s) 201, 577, 635, 706, 1439, 1596
DpnII GATC 6 cut(s) 199, 575, 633, 704, 1437, 1594
Eam1104I CTCTTC 1 cut(s) 543
EarI CTCTTC 1 cut(s) 543
Eco130I CCWWGG 2 cut(s) 563, 1212
Eco24I GRGCYC 1 cut(s) 882
Eco47I GGWCC 1 cut(s) 123
Eco57I CTGAAG 3 cut(s) 567, 1067, 1430
Eco81I CCTNAGG 1 cut(s) 398
Eco91I GGTNACC 1 cut(s) 851
EcoNI CCTNNNNNAGG 1 cut(s) 241
EcoO109I RGGNCCY 2 cut(s) 123, 458
EcoO65I GGTNACC 1 cut(s) 851
EcoRII CCWGG 3 cut(s) 460, 1151, 1233
EcoT14I CCWWGG 2 cut(s) 563, 1212
EcoT38I GRGCYC 1 cut(s) 882
ErhI CCWWGG 2 cut(s) 563, 1212
FaeI CATG 9 cut(s) 179, 234, 310, 387, 426, 539, 979, 1118, 1376
FaqI GGGAC 1 cut(s) 136
FatI CATG 9 cut(s) 175, 230, 306, 383, 422, 535, 975, 1114, 1372
FauI CCCGC 1 cut(s) 1419
FbaI TGATCA 1 cut(s) 633
FblI GTMKAC 2 cut(s) 498, 818
Fnu4HI GCNGC 9 cut(s) 104, 153, 297, 768, 930, 1101, 1119, 1174, 1350
FokI GGATG 4 cut(s) 17, 234, 870, 1148
FriOI GRGCYC 1 cut(s) 882
Fsp4HI GCNGC 9 cut(s) 104, 153, 297, 768, 930, 1101, 1119, 1174, 1350
FspBI CTAG 4 cut(s) 564, 1329, 1397, 1535
FspI TGCGCA 1 cut(s) 255
GlaI GCGC 1 cut(s) 255
GluI GCNGC 9 cut(s) 104, 153, 297, 768, 930, 1101, 1119, 1174, 1350
GsaI CCCAGC 1 cut(s) 648
GsuI CTGGAG 1 cut(s) 435
HaeIII GGCC 5 cut(s) 460, 562, 568, 1164, 1517
HapII CCGG 4 cut(s) 135, 559, 1104, 1518
HgaI GACGC 2 cut(s) 341, 650
HhaI GCGC 1 cut(s) 256
Hin1II CATG 9 cut(s) 179, 234, 310, 387, 426, 539, 979, 1118, 1376
Hin6I GCGC 1 cut(s) 254
HinP1I GCGC 1 cut(s) 254
HincII GTYRAC 1 cut(s) 965
HindII GTYRAC 1 cut(s) 965
HindIII AAGCTT 1 cut(s) 1013
HinfI GANTC 5 cut(s) 671, 737, 1202, 1322, 1490
HpaII CCGG 4 cut(s) 135, 559, 1104, 1518
HphI GGTGA 4 cut(s) 845, 1249, 1307, 1438
Hpy166II GTNNAC 6 cut(s) 499, 819, 965, 985, 1249, 1303
Hpy188I TCNGA 5 cut(s) 289, 533, 575, 1288, 1601
Hpy8I GTNNAC 6 cut(s) 499, 819, 965, 985, 1249, 1303
HpyAV CCTTC 4 cut(s) 426, 956, 1091, 1234
HpyCH4III ACNGT 3 cut(s) 496, 729, 1025
HpyCH4IV ACGT 2 cut(s) 1141, 1251
HpyF3I CTNAG 5 cut(s) 398, 520, 687, 861, 1598
HpySE526I ACGT 2 cut(s) 1141, 1251
Hsp92II CATG 9 cut(s) 179, 234, 310, 387, 426, 539, 979, 1118, 1376
HspAI GCGC 1 cut(s) 254
KroI GCCGGC 1 cut(s) 558
KroNI GCCGGC 1 cut(s) 560
Ksp22I TGATCA 1 cut(s) 633
Kzo9I GATC 6 cut(s) 199, 575, 633, 704, 1437, 1594
LmnI GCTCC 3 cut(s) 268, 289, 1106
Lsp1109I GCAGC 8 cut(s) 139, 283, 754, 941, 1087, 1105, 1160, 1336
LweI GCATC 1 cut(s) 256
MaeI CTAG 4 cut(s) 564, 1329, 1397, 1535
MaeII ACGT 2 cut(s) 1141, 1251
MaeIII GTNAC 8 cut(s) 425, 464, 478, 638, 715, 851, 1181, 1399
MalI GATC 6 cut(s) 201, 577, 635, 706, 1439, 1596
MbiI CCGCTC 1 cut(s) 1426
MboI GATC 6 cut(s) 199, 575, 633, 704, 1437, 1594
MboII GAAGA 3 cut(s) 560, 775, 1205
MfeI CAATTG 1 cut(s) 771
MflI RGATCY 2 cut(s) 199, 575
MhlI GDGCHC 3 cut(s) 882, 901, 1251
MlyI GAGTC 2 cut(s) 665, 746
MnlI CCTC 9 cut(s) 136, 172, 182, 213, 217, 393, 412, 544, 799
MroNI GCCGGC 1 cut(s) 558
MroXI GAANNNNTTC 2 cut(s) 1065, 1206
MseI TTAA 1 cut(s) 330
MslI CAYNNNNRTG 5 cut(s) 476, 755, 791, 1188, 1377
MspA1I CMGCKG 2 cut(s) 791, 932
MspI CCGG 4 cut(s) 135, 559, 1104, 1518
MspR9I CCNGG 4 cut(s) 135, 462, 1153, 1235
MunI CAATTG 1 cut(s) 771
Mva1269I GAATGC 1 cut(s) 560
MvaI CCWGG 3 cut(s) 462, 1153, 1235
MvnI CGCG 1 cut(s) 605
NaeI GCCGGC 1 cut(s) 560
NciI CCSGG 1 cut(s) 135
NdeII GATC 6 cut(s) 199, 575, 633, 704, 1437, 1594
NgoMIV GCCGGC 1 cut(s) 558
NlaIII CATG 9 cut(s) 179, 234, 310, 387, 426, 539, 979, 1118, 1376
NlaIV GGNNCC 6 cut(s) 22, 124, 201, 1163, 1389, 1516
NmuCI GTSAC 6 cut(s) 464, 478, 638, 851, 1181, 1399
NsbI TGCGCA 1 cut(s) 255
NspI RCATGY 6 cut(s) 234, 310, 426, 979, 1118, 1376
NspV TTCGAA 1 cut(s) 485
OliI CACNNNNGTG 1 cut(s) 791
PaeI GCATGC 2 cut(s) 1118, 1376
PciI ACATGT 2 cut(s) 230, 306
PcsI WCGNNNNNNNCGW 1 cut(s) 1485
PctI GAATGC 1 cut(s) 560
PdiI GCCGGC 1 cut(s) 560
PdmI GAANNNNTTC 2 cut(s) 1065, 1206
PfeI GAWTC 3 cut(s) 1202, 1322, 1490
PflMI CCANNNNNTGG 1 cut(s) 1461
PkrI GCNGC 9 cut(s) 105, 154, 298, 769, 931, 1102, 1120, 1175, 1351
PleI GAGTC 2 cut(s) 665, 745
PpsI GAGTC 2 cut(s) 665, 745
PpuMI RGGWCCY 1 cut(s) 123
PscI ACATGT 2 cut(s) 230, 306
Psp5II RGGWCCY 1 cut(s) 123
Psp6I CCWGG 3 cut(s) 460, 1151, 1233
PspEI GGTNACC 1 cut(s) 851
PspFI CCCAGC 1 cut(s) 644
PspGI CCWGG 3 cut(s) 460, 1151, 1233
PspN4I GGNNCC 6 cut(s) 22, 124, 201, 1163, 1389, 1516
PspPI GGNCC 4 cut(s) 123, 458, 1162, 1515
PspPPI RGGWCCY 1 cut(s) 123
PstNI CAGNNNCTG 1 cut(s) 461
PsuI RGATCY 2 cut(s) 199, 575
PvuII CAGCTG 2 cut(s) 791, 932
RsaI GTAC 7 cut(s) 87, 692, 762, 912, 1304, 1345, 1434
RsaNI GTAC 7 cut(s) 86, 691, 761, 911, 1303, 1344, 1433
RseI CAYNNNNRTG 5 cut(s) 476, 755, 791, 1188, 1377
SaqAI TTAA 1 cut(s) 330
SatI GCNGC 9 cut(s) 104, 153, 297, 768, 930, 1101, 1119, 1174, 1350
Sau3AI GATC 6 cut(s) 199, 575, 633, 704, 1437, 1594
Sau96I GGNCC 4 cut(s) 123, 458, 1162, 1515
ScaI AGTACT 1 cut(s) 1345
SchI GAGTC 2 cut(s) 665, 746
ScrFI CCNGG 4 cut(s) 135, 462, 1153, 1235
SduI GDGCHC 3 cut(s) 882, 901, 1251
SfaNI GCATC 1 cut(s) 256
SfcI CTRYAG 1 cut(s) 1257
SfuI TTCGAA 1 cut(s) 485
SinI GGWCC 1 cut(s) 123
SmiMI CAYNNNNRTG 5 cut(s) 476, 755, 791, 1188, 1377
SmlI CTYRAG 2 cut(s) 204, 902
SmoI CTYRAG 2 cut(s) 204, 902
SphI GCATGC 2 cut(s) 1118, 1376
SsiI CCGC 4 cut(s) 18, 103, 1244, 1426
SspMI CTAG 4 cut(s) 564, 1329, 1397, 1535
StyD4I CCNGG 4 cut(s) 133, 460, 1151, 1233
StyI CCWWGG 2 cut(s) 563, 1212
TaaI ACNGT 3 cut(s) 496, 729, 1025
TaiI ACGT 2 cut(s) 1144, 1254
TaqI TCGA 3 cut(s) 485, 592, 1587
TatI WGTACW 3 cut(s) 1302, 1343, 1432
TauI GCSGC 1 cut(s) 106
TfiI GAWTC 3 cut(s) 1202, 1322, 1490
Tru1I TTAA 1 cut(s) 330
Tru9I TTAA 1 cut(s) 330
TscAI CASTG 2 cut(s) 16, 643
TseFI GTSAC 6 cut(s) 464, 478, 638, 851, 1181, 1399
TseI GCWGC 8 cut(s) 152, 296, 767, 929, 1100, 1118, 1173, 1349
Tsp45I GTSAC 6 cut(s) 464, 478, 638, 851, 1181, 1399
TspDTI ATGAA 2 cut(s) 372, 1206
TspRI CASTG 2 cut(s) 16, 643
Van91I CCANNNNNTGG 1 cut(s) 1461
VneI GTGCAC 1 cut(s) 1247
VpaK11BI GGWCC 1 cut(s) 123
XagI CCTNNNNNAGG 1 cut(s) 241
XapI RAATTY 1 cut(s) 778
XceI RCATGY 6 cut(s) 234, 310, 426, 979, 1118, 1376
XcmI CCANNNNNNNNNTGG 1 cut(s) 727
XmaJI CCTAGG 1 cut(s) 563
XmiI GTMKAC 2 cut(s) 498, 818
XmnI GAANNNNTTC 2 cut(s) 1065, 1206
XspI CTAG 4 cut(s) 564, 1329, 1397, 1535
ZrmI AGTACT 1 cut(s) 1345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.