Rroxscaffold_5G00373740

ultraviolet-B receptor UVR8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0002099
Physical Location & Seq
Forward (+)
54869970 .. 54872673
2704 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00373740.1

Sequence Viewer

Length: 1629 bp
ATGGATGCTACAGCGAGCGGAACCCCAACTATACAATACCATAACATTCCTGACCAGCCAATTACCACCATTGTTGCCACTCCTGTACCAACATTTGAAAGGCGGCAACGCCATTGCTTTGGGACCTCCTCAACCCCTGGAGAGTTCCCTTTAGCTGCCAACCCCTCAATTGTCCTTCATGTCCTTACTGCTTGCAATTTGGACCCTCAAGACCTTGCAAAGTTAGAGGCAAGTGATCTGTTGCTCTATGGAACATGTTCCTTTTTCAGGCAGCCTGCAAACTTTGCTCCTGACTTTGACTTGTGCATATCTGAGCTCGCTGCTCTGGACATGTGCCAAAAGAGAGCTATATTTAAGCCAATGACAACTGAACAGCGTCAAGAATTGAAGCAAAGATGTGGCGGTTCATGGAAACTGGTCCTGAGGTTTCTTTTGGCTGGAGAGGCGTGTTTCAGAAGGGAGAAATCACAGGCAATTGTTGGACCTGGTCACAGCATTGCTGTGACTTCAAAAGGAACTGTCTACTCATTTGGTTCTAACAGCTCAGGACAGCTTGGACATGGCACCACTGAAGAGGAATGGCGCCCTCGGCCAATCAGATCTCTGCAAGGCATTCGAATTATTCATGCAGCTGCTGGGGCGGGCAGGACAATGCTGATCAGTGATGCTGGGAAGGTTTATGCCTTTGGGAAGGACTCTTTTGGCGAAACTGAATATGGGGTCCAAGGATCAAAGCTGGTTACCACTCCACAATTGGTTGAGTCCTTGAAAGATATATTTGTGGTGCAAGCTGCAATTGGAAACTTCTTCACAGCTGTGTTGTCAAGGGAAGGCAGGGTATATACATTTTCTTGGGGAAGTGATGGCAAACTTGGTCACCAAACTGAACCGAATGATGTTGAGCCCCATCCCTTGTTGGGAGCACTTGAGAATGTACCTGTGGTGCAAATTGCAGCTGGATACTGCTATCTTCTTGCTCTGGCTTGTCAGCCTAATGGAATGTCTGTTTACTCTGTTGGCTGTGGCTTGGGTGGCAAGCTTGGACATGGTTCAAGAACTGATGAGAAGCATCCCCGACTGATTGAACAGTTTCAGCTTTTGAACCTTCAGCCCATGGTGGTTGCGGCTGGTGCCTGGCATGCTGCTGTGGTTGGCCAGGATGGACGGGTCTGCACGTGGGGTTGGGGTCGTTACGGGTGCTTGGGTCATGGGAATGAAGAGTGTGAATCAGCTCCTAAGGTTGTGGAAGCATTGAGCAATGTGAAAGCTGTGCATGTAGCTACAGGAGATTACACAACCTTTGTGGTTTCCGAAGATGGTGATGTGTACTCATTTGGCTGTGGAGAATCAGCTAGTCTTGGACACAATTCTGCTGCCGATGGACAGGGAAATAGGCATGCAAATGTATTGGCTCCAGAGCTTGTGTCATCACTCAAGCAAGTAAACGAGCGGGTTGTACAGATCAGTCTCACCAATTCAATATACTGGAACGCTCACACTTTTGCACTCACTGAATCGGGGAAACTATATGCATTTGGGGCAGGGGACAAAGGTCAACTAGGAATTGAGCTCGTTGCTAATCAGACTGAAAGGGGAAATCCAGAGCTGGTTGATATTGATCTCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RCC1

Protein Analysis

542

Amino Acids

58.3

Weight (kDa)

5.9

Isoelectric Point (pI)

33.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 156 - 490 1.2e-63 RCC1-like domain
RCC1_2 PF13540 161 - 184 1.6e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 171 - 220 1.9e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 335 - 384 6.7e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 387 - 436 6.1e-15 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 439 - 489 8.9e-06 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 563, 582, 1130
AccBSI CCGCTC 2 cut(s) 18, 1450
AccI GTMKAC 1 cut(s) 522
AciI CCGC 6 cut(s) 18, 103, 402, 641, 1124, 1450
AclWI GGATC 1 cut(s) 736
AcoI YGGCCR 2 cut(s) 590, 1153
AcuI CTGAAG 2 cut(s) 591, 1091
AcvI CACGTG 1 cut(s) 1176
AcyI GRCGYC 1 cut(s) 583
AfaI GTAC 4 cut(s) 87, 936, 1328, 1458
AfiI CCNNNNNNNGG 2 cut(s) 267, 917
AflIII ACRYGT 2 cut(s) 254, 330
AgsI TTSAA 8 cut(s) 98, 388, 510, 769, 1053, 1085, 1102, 1479
AjnI CCWGG 4 cut(s) 136, 484, 1133, 1155
AleI CACNNNNGTG 1 cut(s) 815
Alw21I GWGCWC 3 cut(s) 318, 925, 1572
Alw26I GTCTC 1 cut(s) 1472
AlwI GGATC 1 cut(s) 736
AlwNI CAGNNNCTG 1 cut(s) 635
AoxI GGCC 2 cut(s) 590, 1153
ApeKI GCWGC 9 cut(s) 155, 271, 320, 629, 632, 791, 953, 1142, 1373
Asp700I GAANNNNTTC 2 cut(s) 256, 1089
AspLEI GCGC 1 cut(s) 585
AspS9I GGNCC 5 cut(s) 123, 202, 418, 482, 721
AsuHPI GGTGA 3 cut(s) 869, 1331, 1462
AsuII TTCGAA 1 cut(s) 616
AvaII GGWCC 5 cut(s) 123, 202, 418, 482, 721
AxyI CCTNAGG 2 cut(s) 422, 1236
BaeI ACNNNNGTAYC 2 cut(s) 69, 102
BalI TGGCCA 1 cut(s) 1155
BanI GGYRCC 3 cut(s) 563, 582, 1130
BanII GRGCYC 3 cut(s) 318, 906, 1572
BbrPI CACGTG 1 cut(s) 1176
Bbv12I GWGCWC 3 cut(s) 318, 925, 1572
BbvI GCAGC 9 cut(s) 142, 283, 307, 619, 641, 778, 965, 1129, 1360
BccI CCATC 5 cut(s) 857, 915, 1154, 1310, 1373
BcgI CGANNNNNNTGC 2 cut(s) 596, 630
BciT130I CCWGG 4 cut(s) 138, 486, 1135, 1157
BciVI GTATCC 1 cut(s) 953
BclI TGATCA 1 cut(s) 657
BcoDI GTCTC 1 cut(s) 1472
BfaI CTAG 2 cut(s) 1353, 1559
BfmI CTRYAG 2 cut(s) 9, 1281
BfoI RGCGCY 1 cut(s) 586
BfuI GTATCC 1 cut(s) 953
BglII AGATCT 1 cut(s) 599
Bme1390I CCNGG 4 cut(s) 138, 486, 1135, 1157
Bme18I GGWCC 5 cut(s) 123, 202, 418, 482, 721
BmgT120I GGNCC 5 cut(s) 123, 202, 418, 482, 721
BmiI GGNNCC 8 cut(s) 22, 124, 204, 565, 584, 722, 1132, 1413
BmrFI CCNGG 4 cut(s) 138, 486, 1135, 1157
BmsI GCATC 2 cut(s) 655, 1078
BoxI GACNNNNGTC 1 cut(s) 1551
BpmI CTGGAG 3 cut(s) 159, 459, 1398
Bpu10I CCTNAGC 1 cut(s) 544
Bpu14I TTCGAA 1 cut(s) 616
BpuEI CTTGAG 3 cut(s) 192, 947, 1418
BsaAI YACGTR 1 cut(s) 1176
BsaBI GATNNNNATC 1 cut(s) 1617
BsaHI GRCGYC 1 cut(s) 583
BsaJI CCNNGG 4 cut(s) 136, 587, 724, 1113
Bsc4I CCNNNNNNNGG 2 cut(s) 267, 917
Bse1I ACTGG 2 cut(s) 420, 1490
Bse21I CCTNAGG 2 cut(s) 422, 1236
Bse3DI GCAATG 3 cut(s) 112, 495, 1264
Bse8I GATNNNNATC 1 cut(s) 1617
BseBI CCWGG 4 cut(s) 138, 486, 1135, 1157
BseDI CCNNGG 4 cut(s) 136, 587, 724, 1113
BseGI GGATG 4 cut(s) 10, 907, 1069, 1165
BseJI GATNNNNATC 1 cut(s) 1617
BseLI CCNNNNNNNGG 2 cut(s) 267, 917
BseMI GCAATG 3 cut(s) 112, 495, 1264
BseMII CTCAG 3 cut(s) 303, 413, 558
BseNI ACTGG 2 cut(s) 420, 1490
BseRI GAGGAG 1 cut(s) 118
BseXI GCAGC 9 cut(s) 142, 283, 307, 619, 641, 778, 965, 1129, 1360
BseYI CCCAGC 2 cut(s) 635, 668
BsgI GTGCAG 1 cut(s) 1156
BshFI GGCC 2 cut(s) 592, 1155
BshNI GGYRCC 3 cut(s) 563, 582, 1130
BsiHKAI GWGCWC 3 cut(s) 318, 925, 1572
BslFI GGGAC 2 cut(s) 136, 1559
BslI CCNNNNNNNGG 2 cut(s) 267, 917
BsmAI GTCTC 1 cut(s) 1472
BsmFI GGGAC 2 cut(s) 136, 1559
BsmI GAATGC 1 cut(s) 612
BsnI GGCC 2 cut(s) 592, 1155
Bsp119I TTCGAA 1 cut(s) 616
Bsp1286I GDGCHC 4 cut(s) 318, 906, 925, 1572
Bsp1407I TGTACA 1 cut(s) 1456
Bsp143I GATC 6 cut(s) 235, 599, 657, 728, 1461, 1618
Bsp19I CCATGG 1 cut(s) 1113
BspACI CCGC 6 cut(s) 18, 103, 402, 641, 1124, 1450
BspANI GGCC 2 cut(s) 592, 1155
BspCNI CTCAG 3 cut(s) 304, 414, 557
BspLI GGNNCC 8 cut(s) 22, 124, 204, 565, 584, 722, 1132, 1413
BspPI GGATC 1 cut(s) 736
BspT104I TTCGAA 1 cut(s) 616
BspT107I GGYRCC 3 cut(s) 563, 582, 1130
BsrBI CCGCTC 2 cut(s) 18, 1450
BsrDI GCAATG 3 cut(s) 112, 495, 1264
BsrGI TGTACA 1 cut(s) 1456
BsrI ACTGG 2 cut(s) 420, 1490
BssECI CCNNGG 4 cut(s) 136, 587, 724, 1113
BssMI GATC 6 cut(s) 235, 599, 657, 728, 1461, 1618
BssNI GRCGYC 1 cut(s) 583
BssT1I CCWWGG 2 cut(s) 724, 1113
Bst2UI CCWGG 4 cut(s) 138, 486, 1135, 1157
Bst4CI ACNGT 2 cut(s) 520, 1089
Bst6I CTCTTC 2 cut(s) 567, 1212
BstACI GRCGYC 1 cut(s) 583
BstAPI GCANNNNNTGC 1 cut(s) 284
BstAUI TGTACA 1 cut(s) 1456
BstBAI YACGTR 1 cut(s) 1176
BstBI TTCGAA 1 cut(s) 616
BstC8I GCNNGC 9 cut(s) 16, 193, 276, 318, 643, 789, 1037, 1140, 1398
BstDEI CTNAG 5 cut(s) 312, 422, 544, 1236, 1622
BstDSI CCRYGG 1 cut(s) 1113
BstEII GGTNACC 2 cut(s) 739, 875
BstENI CCTNNNNNAGG 1 cut(s) 265
BstF5I GGATG 4 cut(s) 10, 907, 1069, 1165
BstH2I RGCGCY 1 cut(s) 586
BstHHI GCGC 1 cut(s) 585
BstKTI GATC 6 cut(s) 238, 602, 660, 731, 1464, 1621
BstMAI GTCTC 1 cut(s) 1472
BstMBI GATC 6 cut(s) 235, 599, 657, 728, 1461, 1618
BstMWI GCNNNNNNNGC 8 cut(s) 284, 443, 589, 638, 1032, 1130, 1139, 1538
BstNI CCWGG 4 cut(s) 138, 486, 1135, 1157
BstNSI RCATGY 5 cut(s) 258, 334, 1142, 1277, 1400
BstPAI GACNNNNGTC 1 cut(s) 1551
BstPI GGTNACC 2 cut(s) 739, 875
BstSCI CCNGG 4 cut(s) 136, 484, 1133, 1155
BstSFI CTRYAG 2 cut(s) 9, 1281
BstV1I GCAGC 9 cut(s) 142, 283, 307, 619, 641, 778, 965, 1129, 1360
BstX2I RGATCY 1 cut(s) 599
BstXI CCANNNNNNTGG 1 cut(s) 119
BstYI RGATCY 1 cut(s) 599
Bsu36I CCTNAGG 2 cut(s) 422, 1236
BsuI GTATCC 1 cut(s) 953
BsuRI GGCC 2 cut(s) 592, 1155
BtgI CCRYGG 1 cut(s) 1113
BtsCI GGATG 4 cut(s) 10, 907, 1069, 1165
BtsIMutI CAGTG 3 cut(s) 567, 667, 1509
Cac8I GCNNGC 9 cut(s) 16, 193, 276, 318, 643, 789, 1037, 1140, 1398
CaiI CAGNNNCTG 1 cut(s) 635
CfoI GCGC 1 cut(s) 585
Cfr13I GGNCC 5 cut(s) 123, 202, 418, 482, 721
CseI GACGC 1 cut(s) 365
CsiI ACCWGGT 1 cut(s) 484
Csp6I GTAC 4 cut(s) 86, 935, 1327, 1457
CspCI CAANNNNNGTGG 4 cut(s) 55, 90, 1284, 1319
CviQI GTAC 4 cut(s) 86, 935, 1327, 1457
DdeI CTNAG 5 cut(s) 312, 422, 544, 1236, 1622
DinI GGCGCC 1 cut(s) 584
DpnI GATC 6 cut(s) 237, 601, 659, 730, 1463, 1620
DpnII GATC 6 cut(s) 235, 599, 657, 728, 1461, 1618
EaeI YGGCCR 2 cut(s) 590, 1153
Eam1104I CTCTTC 2 cut(s) 567, 1212
EarI CTCTTC 2 cut(s) 567, 1212
Ecl136II GAGCTC 2 cut(s) 316, 1570
Eco130I CCWWGG 2 cut(s) 724, 1113
Eco24I GRGCYC 3 cut(s) 318, 906, 1572
Eco47I GGWCC 5 cut(s) 123, 202, 418, 482, 721
Eco53kI GAGCTC 2 cut(s) 316, 1570
Eco57I CTGAAG 2 cut(s) 591, 1091
Eco72I CACGTG 1 cut(s) 1176
Eco81I CCTNAGG 2 cut(s) 422, 1236
Eco91I GGTNACC 2 cut(s) 739, 875
EcoICRI GAGCTC 2 cut(s) 316, 1570
EcoNI CCTNNNNNAGG 1 cut(s) 265
EcoO109I RGGNCCY 1 cut(s) 123
EcoO65I GGTNACC 2 cut(s) 739, 875
EcoRII CCWGG 4 cut(s) 136, 484, 1133, 1155
EcoT14I CCWWGG 2 cut(s) 724, 1113
EcoT22I ATGCAT 1 cut(s) 1534
EcoT38I GRGCYC 3 cut(s) 318, 906, 1572
EgeI GGCGCC 1 cut(s) 584
EheI GGCGCC 1 cut(s) 584
ErhI CCWWGG 2 cut(s) 724, 1113
FaqI GGGAC 2 cut(s) 136, 1559
FauI CCCGC 2 cut(s) 634, 1443
FbaI TGATCA 1 cut(s) 657
FblI GTMKAC 1 cut(s) 522
FokI GGATG 4 cut(s) 17, 894, 1056, 1172
FriOI GRGCYC 3 cut(s) 318, 906, 1572
FspBI CTAG 2 cut(s) 1353, 1559
GlaI GCGC 1 cut(s) 584
GsaI CCCAGC 2 cut(s) 639, 672
GsuI CTGGAG 3 cut(s) 159, 459, 1398
HaeII RGCGCY 1 cut(s) 586
HaeIII GGCC 2 cut(s) 592, 1155
HgaI GACGC 1 cut(s) 365
HhaI GCGC 1 cut(s) 585
Hin1I GRCGYC 1 cut(s) 583
Hin6I GCGC 1 cut(s) 583
HinP1I GCGC 1 cut(s) 583
HincII GTYRAC 1 cut(s) 1556
HindII GTYRAC 1 cut(s) 1556
HindIII AAGCTT 1 cut(s) 1037
HinfI GANTC 5 cut(s) 695, 761, 1226, 1346, 1514
HphI GGTGA 3 cut(s) 869, 1331, 1462
Hpy166II GTNNAC 5 cut(s) 523, 1009, 1327, 1444, 1556
Hpy188I TCNGA 6 cut(s) 313, 455, 599, 1312, 1584, 1625
Hpy8I GTNNAC 5 cut(s) 523, 1009, 1327, 1444, 1556
HpyAV CCTTC 6 cut(s) 185, 450, 667, 685, 824, 1115
HpyCH4III ACNGT 2 cut(s) 520, 1089
HpyCH4IV ACGT 1 cut(s) 1175
HpyF10VI GCNNNNNNNGC 8 cut(s) 284, 443, 589, 638, 1032, 1130, 1139, 1538
HpyF3I CTNAG 5 cut(s) 312, 422, 544, 1236, 1622
HpySE526I ACGT 1 cut(s) 1175
Hsp92I GRCGYC 1 cut(s) 583
HspAI GCGC 1 cut(s) 583
KasI GGCGCC 1 cut(s) 582
Ksp22I TGATCA 1 cut(s) 657
Kzo9I GATC 6 cut(s) 235, 599, 657, 728, 1461, 1618
LmnI GCTCC 4 cut(s) 292, 920, 1237, 1417
Lsp1109I GCAGC 9 cut(s) 142, 283, 307, 619, 641, 778, 965, 1129, 1360
LweI GCATC 2 cut(s) 655, 1078
MabI ACCWGGT 1 cut(s) 484
MaeI CTAG 2 cut(s) 1353, 1559
MaeII ACGT 1 cut(s) 1175
MaeIII GTNAC 5 cut(s) 488, 502, 739, 875, 1190
MalI GATC 6 cut(s) 237, 601, 659, 730, 1463, 1620
MbiI CCGCTC 2 cut(s) 18, 1450
MboI GATC 6 cut(s) 235, 599, 657, 728, 1461, 1618
MboII GAAGA 5 cut(s) 584, 799, 962, 1229, 1325
MfeI CAATTG 4 cut(s) 168, 474, 752, 795
MflI RGATCY 1 cut(s) 599
MhlI GDGCHC 4 cut(s) 318, 906, 925, 1572
MlsI TGGCCA 1 cut(s) 1155
MluNI TGGCCA 1 cut(s) 1155
Mly113I GGCGCC 1 cut(s) 583
MlyI GAGTC 2 cut(s) 689, 770
MmeI TCCRAC 1 cut(s) 460
MnlI CCTC 9 cut(s) 136, 139, 175, 216, 220, 417, 436, 568, 597
Mox20I TGGCCA 1 cut(s) 1155
Mph1103I ATGCAT 1 cut(s) 1534
MroXI GAANNNNTTC 2 cut(s) 256, 1089
MscI TGGCCA 1 cut(s) 1155
MseI TTAA 1 cut(s) 354
MslI CAYNNNNRTG 4 cut(s) 500, 815, 1212, 1401
Msp20I TGGCCA 1 cut(s) 1155
MspA1I CMGCKG 3 cut(s) 632, 815, 956
MspR9I CCNGG 4 cut(s) 138, 486, 1135, 1157
MunI CAATTG 4 cut(s) 168, 474, 752, 795
Mva1269I GAATGC 1 cut(s) 612
MvaI CCWGG 4 cut(s) 138, 486, 1135, 1157
MwoI GCNNNNNNNGC 8 cut(s) 284, 443, 589, 638, 1032, 1130, 1139, 1538
NarI GGCGCC 1 cut(s) 583
NcoI CCATGG 1 cut(s) 1113
NdeII GATC 6 cut(s) 235, 599, 657, 728, 1461, 1618
NlaIV GGNNCC 8 cut(s) 22, 124, 204, 565, 584, 722, 1132, 1413
NmeAIII GCCGAG 1 cut(s) 568
NmuCI GTSAC 3 cut(s) 488, 502, 875
NsiI ATGCAT 1 cut(s) 1534
NspI RCATGY 5 cut(s) 258, 334, 1142, 1277, 1400
NspV TTCGAA 1 cut(s) 616
OliI CACNNNNGTG 1 cut(s) 815
PaeI GCATGC 2 cut(s) 1142, 1400
PciI ACATGT 2 cut(s) 254, 330
PctI GAATGC 1 cut(s) 612
PdmI GAANNNNTTC 2 cut(s) 256, 1089
PfeI GAWTC 3 cut(s) 1226, 1346, 1514
PflFI GACNNNGTC 1 cut(s) 486
PleI GAGTC 2 cut(s) 689, 769
PluTI GGCGCC 1 cut(s) 586
PmaCI CACGTG 1 cut(s) 1176
PmlI CACGTG 1 cut(s) 1176
PpsI GAGTC 2 cut(s) 689, 769
Ppu21I YACGTR 1 cut(s) 1176
PpuMI RGGWCCY 1 cut(s) 123
PscI ACATGT 2 cut(s) 254, 330
PshAI GACNNNNGTC 1 cut(s) 1551
Psp124BI GAGCTC 2 cut(s) 318, 1572
Psp5II RGGWCCY 1 cut(s) 123
Psp6I CCWGG 4 cut(s) 136, 484, 1133, 1155
PspCI CACGTG 1 cut(s) 1176
PspEI GGTNACC 2 cut(s) 739, 875
PspFI CCCAGC 2 cut(s) 635, 668
PspGI CCWGG 4 cut(s) 136, 484, 1133, 1155
PspN4I GGNNCC 8 cut(s) 22, 124, 204, 565, 584, 722, 1132, 1413
PspPI GGNCC 5 cut(s) 123, 202, 418, 482, 721
PspPPI RGGWCCY 1 cut(s) 123
PstNI CAGNNNCTG 1 cut(s) 635
PsuI RGATCY 1 cut(s) 599
PsyI GACNNNGTC 1 cut(s) 486
PvuII CAGCTG 3 cut(s) 632, 815, 956
RsaI GTAC 4 cut(s) 87, 936, 1328, 1458
RsaNI GTAC 4 cut(s) 86, 935, 1327, 1457
RseI CAYNNNNRTG 4 cut(s) 500, 815, 1212, 1401
SacI GAGCTC 2 cut(s) 318, 1572
SaqAI TTAA 1 cut(s) 354
Sau3AI GATC 6 cut(s) 235, 599, 657, 728, 1461, 1618
Sau96I GGNCC 5 cut(s) 123, 202, 418, 482, 721
SchI GAGTC 2 cut(s) 689, 770
ScrFI CCNGG 4 cut(s) 138, 486, 1135, 1157
SduI GDGCHC 4 cut(s) 318, 906, 925, 1572
SexAI ACCWGGT 1 cut(s) 484
SfaNI GCATC 2 cut(s) 655, 1078
SfcI CTRYAG 2 cut(s) 9, 1281
SfoI GGCGCC 1 cut(s) 584
SfuI TTCGAA 1 cut(s) 616
SinI GGWCC 5 cut(s) 123, 202, 418, 482, 721
SmiMI CAYNNNNRTG 4 cut(s) 500, 815, 1212, 1401
SmlI CTYRAG 3 cut(s) 207, 926, 1433
SmoI CTYRAG 3 cut(s) 207, 926, 1433
SphI GCATGC 2 cut(s) 1142, 1400
SsiI CCGC 6 cut(s) 18, 103, 402, 641, 1124, 1450
SspDI GGCGCC 1 cut(s) 582
SspMI CTAG 2 cut(s) 1353, 1559
SstI GAGCTC 2 cut(s) 318, 1572
StyD4I CCNGG 4 cut(s) 136, 484, 1133, 1155
StyI CCWWGG 2 cut(s) 724, 1113
TaaI ACNGT 2 cut(s) 520, 1089
TaiI ACGT 1 cut(s) 1178
TaqI TCGA 1 cut(s) 616
TatI WGTACW 2 cut(s) 1326, 1456
TauI GCSGC 2 cut(s) 106, 1127
TfiI GAWTC 3 cut(s) 1226, 1346, 1514
Tru1I TTAA 1 cut(s) 354
Tru9I TTAA 1 cut(s) 354
TscAI CASTG 3 cut(s) 574, 667, 1516
TseFI GTSAC 3 cut(s) 488, 502, 875
TseI GCWGC 9 cut(s) 155, 271, 320, 629, 632, 791, 953, 1142, 1373
Tsp45I GTSAC 3 cut(s) 488, 502, 875
TspDTI ATGAA 4 cut(s) 167, 396, 614, 1230
TspRI CASTG 3 cut(s) 574, 667, 1516
Tth111I GACNNNGTC 1 cut(s) 486
VpaK11BI GGWCC 5 cut(s) 123, 202, 418, 482, 721
XagI CCTNNNNNAGG 1 cut(s) 265
XceI RCATGY 5 cut(s) 258, 334, 1142, 1277, 1400
XcmI CCANNNNNNNNNTGG 1 cut(s) 751
XmiI GTMKAC 1 cut(s) 522
XmnI GAANNNNTTC 2 cut(s) 256, 1089
XspI CTAG 2 cut(s) 1353, 1559
Zsp2I ATGCAT 1 cut(s) 1534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.