MD13G1146000.v1.1

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0006149
Physical Location & Seq
Forward (+)
11401139 .. 11405176
4038 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1146000.v1.1.491

Sequence Viewer

Length: 2145 bp
ATGACGTTCTGTATCATTGTATTGTATAGGGGTGGCAGTACTGGAATGGAAATGTATAATGTTCCCGAACATGCGAATGATGAGGTGTATATGATTCAAAACATGGAACAAAACCTGCATTTTCCAAGTTCCTTTGAACAAGTTGAAGGTACGTACAACGAAGGAGCTCCTGAGTTTGTTGTTGACCAGGGCATGTATTATCCCGCTGCCACAAGCTATGGGTATTACTGTACAGGATTTGAATCACCCGGTGAATTTGAGGACCACCGTAGGATTTTTGGCGTTGATGGTCCAGATATCCAGTACACGGGTGCACAGAATGAAAGTTTGCCTTTTGTATATTATACACCTAGCTATGGATATGCACAGTCTCCATACAACCCATACAATCCTTACATACCTGGTGCTATGATAGGCGCTGATGGCCAACAGTATACCATCCCCCCTTATCAGAACTCTGTCTCTTCACCTTCCTACATCCCTTTTGTTGTTCAACAAGATGCCATTCCCAACAGTTCACCTGACTCCTTGTTTGATAATGGAGCATCAGTTAATAGACCCGATGGAAGAGGGGTCAAATATAACTTAAATTCAGCTTCTGGAGGATACCCTAACTCCTCGAAGTCCTCTTTAAATCAGATGAATCCCGTGACAAAGGTATCAGAAGGTCAAAGAGGTAATGGATCAAGCAAGCATGCTGTGACACATGGAGGTGTTTCTTCTGGTCGTTTTCCAACCCCAGCCTCGTCACATGTTAATCAGGTTAGAAGTGCATCTGGGTCAGTTTCGTCTGTGGATAACCTTCCAAATGGGAAAGTATTGCCTAATCATTTGAATGTGGAAATCCCCGTCACTAATGGCTTATCTAACTTTGGATCTAGTGCTCAAGGAAGGGGTGCTGCGGGTAAGTTTCGACCAAAATTTCATGTTGGTAGGGCCTTGAATGACGTACATGGTGGCCTGGAGGCATTGGGTGAGCAGAATTGTGGTCCTAGAATCAACAGGTTAAAAAATCAACTAGCCGTGAAAGCCTATACGACCAATGCAGGAGATTGTGATGCACAAGGAAACATCATTATCCGTACTGATAAATATAACAAGGATGATCTGCCCGTTGACTACGCGGATGCAAAGTTTTTTGTAATAAAATCATACAGCGAGGATGATGTTCACAAAAGCGTCAAATACAATGTCTGGTCATCCACACCCCATGGCAACAAGAAACTAAATAGTGCATATGAAGATGCTCAAAGAATAGCTGCAGGAAAACATAGAGCCTGTCCTATCTTCCTTTTCTTTTCCGTTAATGCAAGTGGTCAATTCTGTGGCGTAGCGGAGATGGATGGCCCGGTTGACTTTCACAAGGATATGGACTTTTGGCAGCAAGATAAATGGAGTGGGAGCTTCCCTGTTAAGTGGCACATCATTAAGGATGTTCCAAATACCAGTTTCAGGCACATTGTATTGGAGAACAATGAAAACAAGCCAGTGACTAATAGCAGGGATACGCAAGAGATTATGCATAAGAAAGGCTTGGAGATGCTGAAAATATTCAAGAATCACACATTGAAGACATCTTTACTTGATGACTTTATGTACTATGAGGACCGTCAGAAAATCATGCAGGAAGAGAGAGGCAGGTTACTTCTTAGAAGCTTTGAAAGTCCATTTTTAGTACCTGGGCTGGGTCCTCCCCGCAAGCTGCACAACTCTGTGGGTGAGCTGCCTCGTATTAAGGAAGAAAAAGTCACCAAACTTAATGACGATGTGAACAACGCGAAAAAGACTTTGGTCTCTACTCCTGAGCAGGTTTCCTCTAACTCAAGTGTTATCAACGCGAGTATCAAGAATGAAGATGCTGAGCGCAAGGCAATTGAAGCAAAAGATGATGTCGTGTCTACCTTAAAAATTGATTCCCTCACTATTACTCCAAAGCAGGCAGGATCAAAATCTTCAGCTGCCGCTGTTACTAACACCCGAAAGGTTGATGTTGTCACTGTAGGTTCAATGCCCGTAAGAGTTAACGGGTATTCTGAATCCTTGGGTAATTTAACAGTTGGAACAATCCCTCTGGATCCTAGAGCGTTACAGCTAGAGAAGGGCGGGTCTATCATAAAAAATGCAGCTCATCCTCAAGAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

715

Amino Acids

78.48

Weight (kDa)

6.57

Isoelectric Point (pI)

34.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 377 - 519 1.9e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 123, 1629, 1798
AccI GTMKAC 2 cut(s) 434, 1898
AccII CGCG 3 cut(s) 1124, 1778, 1838
AciI CCGC 7 cut(s) 204, 902, 1124, 1334, 1696, 1962, 2103
AclWI GGATC 5 cut(s) 691, 883, 1951, 2069, 2082
AcoI YGGCCR 1 cut(s) 424
AcsI RAATTY 3 cut(s) 254, 589, 920
AcuI CTGAAG 1 cut(s) 1938
AdeI CACNNNGTG 1 cut(s) 251
AfaI GTAC 9 cut(s) 40, 151, 155, 232, 305, 951, 1084, 1598, 1677
AfiI CCNNNNNNNGG 4 cut(s) 307, 356, 1452, 1685
AflIII ACRYGT 1 cut(s) 751
AjnI CCWGG 4 cut(s) 186, 400, 960, 1678
AjuI GAANNNNNNNTTGG 2 cut(s) 1772, 1804
Alw21I GWGCWC 3 cut(s) 169, 316, 886
Alw26I GTCTC 3 cut(s) 375, 466, 1798
Alw44I GTGCAC 1 cut(s) 312
AlwI GGATC 5 cut(s) 691, 883, 1951, 2069, 2082
AlwNI CAGNNNCTG 1 cut(s) 599
AoxI GGCC 4 cut(s) 424, 936, 958, 1345
ApaLI GTGCAC 1 cut(s) 312
ApeKI GCWGC 8 cut(s) 206, 899, 1259, 1381, 1702, 1723, 1958, 2123
ApoI RAATTY 3 cut(s) 254, 589, 920
ArsI GACNNNNNNTTYG 4 cut(s) 515, 547, 1176, 1208
Asp700I GAANNNNTTC 1 cut(s) 1550
AspLEI GCGC 2 cut(s) 419, 1866
AspS9I GGNCC 7 cut(s) 262, 290, 936, 989, 1346, 1606, 1688
AsuC2I CCSGG 2 cut(s) 249, 1349
AsuHPI GGTGA 7 cut(s) 237, 263, 459, 510, 986, 1730, 1741
AvaII GGWCC 5 cut(s) 262, 290, 989, 1606, 1688
BaeGI GKGCMC 1 cut(s) 316
BaeI ACNNNNGTAYC 4 cut(s) 642, 675, 1825, 1858
BalI TGGCCA 1 cut(s) 426
BamHI GGATCC 1 cut(s) 2074
BanII GRGCYC 1 cut(s) 169
BbsI GAAGAC 1 cut(s) 1577
Bbv12I GWGCWC 3 cut(s) 169, 316, 886
BbvI GCAGC 8 cut(s) 193, 886, 1246, 1393, 1689, 1710, 1945, 2135
BccI CCATC 6 cut(s) 281, 416, 446, 557, 1333, 1337
BceAI ACGGC 1 cut(s) 1007
BciT130I CCWGG 4 cut(s) 188, 402, 962, 1680
BciVI GTATCC 2 cut(s) 599, 1498
BcnI CCSGG 2 cut(s) 249, 1349
BcoDI GTCTC 3 cut(s) 375, 466, 1798
BfaI CTAG 6 cut(s) 351, 879, 993, 1019, 2079, 2093
BfmI CTRYAG 2 cut(s) 1260, 1998
BfoI RGCGCY 1 cut(s) 420
BfuAI ACCTGC 3 cut(s) 123, 1629, 1798
BfuI GTATCC 2 cut(s) 599, 1498
BisI GCNGC 9 cut(s) 207, 900, 1260, 1382, 1703, 1724, 1959, 1962, 2124
BlpI GCTNAGC 1 cut(s) 1860
BlsI GCNGC 9 cut(s) 208, 901, 1261, 1383, 1704, 1725, 1960, 1963, 2125
BmcAI AGTACT 1 cut(s) 40
Bme1390I CCNGG 6 cut(s) 188, 249, 402, 962, 1349, 1680
Bme18I GGWCC 5 cut(s) 262, 290, 989, 1606, 1688
BmgT120I GGNCC 7 cut(s) 262, 290, 936, 989, 1346, 1606, 1688
BmiI GGNNCC 2 cut(s) 1689, 2076
BmrFI CCNGG 6 cut(s) 188, 249, 402, 962, 1349, 1680
BmsI GCATC 8 cut(s) 490, 554, 782, 1048, 1117, 1234, 1530, 1846
BoxI GACNNNNGTC 1 cut(s) 1790
BpiI GAAGAC 1 cut(s) 1577
BpmI CTGGAG 2 cut(s) 621, 983
Bpu10I CCTNAGC 1 cut(s) 1803
Bpu1102I GCTNAGC 1 cut(s) 1860
BpuEI CTTGAG 3 cut(s) 870, 1807, 2118
BpuMI CCSGG 2 cut(s) 249, 1349
BsaAI YACGTR 1 cut(s) 153
BsaBI GATNNNNATC 2 cut(s) 241, 1948
BsaI GGTCTC 1 cut(s) 1798
BsaJI CCNNGG 4 cut(s) 187, 1210, 1679, 2040
BsaXI ACNNNNNCTCC 6 cut(s) 534, 564, 599, 629, 1912, 1942
Bsc4I CCNNNNNNNGG 4 cut(s) 307, 356, 1452, 1685
Bse1I ACTGG 4 cut(s) 46, 301, 1446, 1487
Bse8I GATNNNNATC 2 cut(s) 241, 1948
BseBI CCWGG 4 cut(s) 188, 402, 962, 1680
BseDI CCNNGG 4 cut(s) 187, 1210, 1679, 2040
BseGI GGATG 9 cut(s) 438, 477, 1108, 1132, 1168, 1199, 1348, 1438, 2128
BseJI GATNNNNATC 2 cut(s) 241, 1948
BseLI CCNNNNNNNGG 4 cut(s) 307, 356, 1452, 1685
BseMII CTCAG 3 cut(s) 162, 1794, 1851
BseNI ACTGG 4 cut(s) 46, 301, 1446, 1487
BseRI GAGGAG 1 cut(s) 607
BseSI GKGCMC 1 cut(s) 316
BseXI GCAGC 8 cut(s) 193, 886, 1246, 1393, 1689, 1710, 1945, 2135
BseYI CCCAGC 2 cut(s) 739, 1684
BsgI GTGCAG 1 cut(s) 1688
Bsh1236I CGCG 3 cut(s) 1124, 1778, 1838
BshFI GGCC 4 cut(s) 426, 938, 960, 1347
BsiHKAI GWGCWC 3 cut(s) 169, 316, 886
BsiSI CCGG 2 cut(s) 249, 1349
BslI CCNNNNNNNGG 4 cut(s) 307, 356, 1452, 1685
BsmAI GTCTC 3 cut(s) 375, 466, 1798
BsnI GGCC 4 cut(s) 426, 938, 960, 1347
Bso31I GGTCTC 1 cut(s) 1798
Bsp1286I GDGCHC 3 cut(s) 169, 316, 886
Bsp1407I TGTACA 1 cut(s) 230
Bsp143I GATC 5 cut(s) 683, 875, 1105, 1943, 2074
Bsp1720I GCTNAGC 1 cut(s) 1860
Bsp19I CCATGG 1 cut(s) 1210
BspACI CCGC 7 cut(s) 204, 902, 1124, 1334, 1696, 1962, 2103
BspANI GGCC 4 cut(s) 426, 938, 960, 1347
BspCNI CTCAG 3 cut(s) 163, 1795, 1852
BspFNI CGCG 3 cut(s) 1124, 1778, 1838
BspLI GGNNCC 2 cut(s) 1689, 2076
BspMAI CTGCAG 1 cut(s) 1264
BspMI ACCTGC 3 cut(s) 123, 1629, 1798
BspPI GGATC 5 cut(s) 691, 883, 1951, 2069, 2082
BspTNI GGTCTC 1 cut(s) 1798
BsrGI TGTACA 1 cut(s) 230
BsrI ACTGG 4 cut(s) 46, 301, 1446, 1487
BssECI CCNNGG 4 cut(s) 187, 1210, 1679, 2040
BssMI GATC 5 cut(s) 683, 875, 1105, 1943, 2074
BssNAI GTATAC 1 cut(s) 435
BssT1I CCWWGG 2 cut(s) 1210, 2040
Bst1107I GTATAC 1 cut(s) 435
Bst2UI CCWGG 4 cut(s) 188, 402, 962, 1680
Bst4CI ACNGT 8 cut(s) 230, 269, 369, 432, 515, 1610, 1999, 2056
Bst6I CTCTTC 3 cut(s) 469, 562, 1623
BstAUI TGTACA 1 cut(s) 230
BstBAI YACGTR 1 cut(s) 153
BstC8I GCNNGC 4 cut(s) 692, 696, 1700, 1938
BstDEI CTNAG 4 cut(s) 171, 1649, 1803, 1860
BstDSI CCRYGG 1 cut(s) 1210
BstF5I GGATG 9 cut(s) 438, 477, 1108, 1132, 1168, 1199, 1348, 1438, 2128
BstFNI CGCG 3 cut(s) 1124, 1778, 1838
BstH2I RGCGCY 1 cut(s) 420
BstHHI GCGC 2 cut(s) 419, 1866
BstKTI GATC 5 cut(s) 686, 878, 1108, 1946, 2077
BstMAI GTCTC 3 cut(s) 375, 466, 1798
BstMBI GATC 5 cut(s) 683, 875, 1105, 1943, 2074
BstMWI GCNNNNNNNGC 3 cut(s) 423, 1028, 1877
BstNI CCWGG 4 cut(s) 188, 402, 962, 1680
BstNSI RCATGY 4 cut(s) 74, 196, 698, 755
BstPAI GACNNNNGTC 1 cut(s) 1790
BstSCI CCNGG 6 cut(s) 186, 247, 400, 960, 1347, 1678
BstSFI CTRYAG 2 cut(s) 1260, 1998
BstSLI GKGCMC 1 cut(s) 316
BstSNI TACGTA 1 cut(s) 153
BstUI CGCG 3 cut(s) 1124, 1778, 1838
BstV1I GCAGC 8 cut(s) 193, 886, 1246, 1393, 1689, 1710, 1945, 2135
BstV2I GAAGAC 1 cut(s) 1577
BstX2I RGATCY 2 cut(s) 875, 2074
BstYI RGATCY 2 cut(s) 875, 2074
BstZ17I GTATAC 1 cut(s) 435
BsuI GTATCC 2 cut(s) 599, 1498
BsuRI GGCC 4 cut(s) 426, 938, 960, 1347
BtgI CCRYGG 1 cut(s) 1210
BtsCI GGATG 9 cut(s) 438, 477, 1108, 1132, 1168, 1199, 1348, 1438, 2128
BtsIMutI CAGTG 2 cut(s) 1494, 1995
BveI ACCTGC 3 cut(s) 123, 1629, 1798
Cac8I GCNNGC 4 cut(s) 692, 696, 1700, 1938
CaiI CAGNNNCTG 1 cut(s) 599
CfoI GCGC 2 cut(s) 419, 1866
Cfr13I GGNCC 7 cut(s) 262, 290, 936, 989, 1346, 1606, 1688
CseI GACGC 1 cut(s) 1168
CsiI ACCWGGT 1 cut(s) 400
Csp6I GTAC 9 cut(s) 39, 150, 154, 231, 304, 950, 1083, 1597, 1676
CviQI GTAC 9 cut(s) 39, 150, 154, 231, 304, 950, 1083, 1597, 1676
DdeI CTNAG 4 cut(s) 171, 1649, 1803, 1860
DpnI GATC 5 cut(s) 685, 877, 1107, 1945, 2076
DpnII GATC 5 cut(s) 683, 875, 1105, 1943, 2074
DraI TTTAAA 1 cut(s) 633
DraIII CACNNNGTG 1 cut(s) 251
EaeI YGGCCR 1 cut(s) 424
Eam1104I CTCTTC 3 cut(s) 469, 562, 1623
EarI CTCTTC 3 cut(s) 469, 562, 1623
Ecl136II GAGCTC 1 cut(s) 167
Eco105I TACGTA 1 cut(s) 153
Eco130I CCWWGG 2 cut(s) 1210, 2040
Eco24I GRGCYC 1 cut(s) 169
Eco31I GGTCTC 1 cut(s) 1798
Eco32I GATATC 1 cut(s) 298
Eco47I GGWCC 5 cut(s) 262, 290, 989, 1606, 1688
Eco53kI GAGCTC 1 cut(s) 167
Eco57I CTGAAG 1 cut(s) 1938
EcoICRI GAGCTC 1 cut(s) 167
EcoO109I RGGNCCY 2 cut(s) 936, 1688
EcoRII CCWGG 4 cut(s) 186, 400, 960, 1678
EcoRV GATATC 1 cut(s) 298
EcoT14I CCWWGG 2 cut(s) 1210, 2040
EcoT22I ATGCAT 1 cut(s) 1524
EcoT38I GRGCYC 1 cut(s) 169
ErhI CCWWGG 2 cut(s) 1210, 2040
FalI AAGNNNNNCTT 4 cut(s) 316, 348, 1517, 1549
FauI CCCGC 4 cut(s) 211, 895, 1703, 2096
FauNDI CATATG 1 cut(s) 1237
FblI GTMKAC 2 cut(s) 434, 1898
Fnu4HI GCNGC 9 cut(s) 207, 900, 1260, 1382, 1703, 1724, 1959, 1962, 2124
FokI GGATG 9 cut(s) 425, 464, 1115, 1139, 1175, 1186, 1355, 1445, 2115
FriOI GRGCYC 1 cut(s) 169
Fsp4HI GCNGC 9 cut(s) 207, 900, 1260, 1382, 1703, 1724, 1959, 1962, 2124
FspBI CTAG 6 cut(s) 351, 879, 993, 1019, 2079, 2093
GlaI GCGC 2 cut(s) 418, 1865
GluI GCNGC 9 cut(s) 207, 900, 1260, 1382, 1703, 1724, 1959, 1962, 2124
GsaI CCCAGC 2 cut(s) 743, 1688
GsuI CTGGAG 2 cut(s) 621, 983
HaeII RGCGCY 1 cut(s) 420
HaeIII GGCC 4 cut(s) 426, 938, 960, 1347
HapII CCGG 2 cut(s) 249, 1349
HgaI GACGC 1 cut(s) 1168
HhaI GCGC 2 cut(s) 419, 1866
Hin6I GCGC 2 cut(s) 417, 1864
HinP1I GCGC 2 cut(s) 417, 1864
HincII GTYRAC 4 cut(s) 184, 1117, 1354, 2023
HindII GTYRAC 4 cut(s) 184, 1117, 1354, 2023
HindIII AAGCTT 1 cut(s) 1654
HinfI GANTC 8 cut(s) 94, 242, 524, 643, 996, 1558, 1913, 2036
HpaI GTTAAC 1 cut(s) 2023
HpaII CCGG 2 cut(s) 249, 1349
HphI GGTGA 7 cut(s) 237, 263, 459, 510, 986, 1730, 1741
Hpy188I TCNGA 5 cut(s) 453, 639, 664, 1614, 2035
Hpy188III TCNNGA 9 cut(s) 65, 170, 293, 600, 1555, 1802, 1846, 2072, 2135
HpyAV CCTTC 7 cut(s) 140, 155, 480, 659, 812, 885, 2092
HpyCH4III ACNGT 8 cut(s) 230, 269, 369, 432, 515, 1610, 1999, 2056
HpyCH4IV ACGT 3 cut(s) 5, 152, 948
HpyF10VI GCNNNNNNNGC 3 cut(s) 423, 1028, 1877
HpyF3I CTNAG 4 cut(s) 171, 1649, 1803, 1860
HpySE526I ACGT 3 cut(s) 5, 152, 948
HspAI GCGC 2 cut(s) 417, 1864
KspAI GTTAAC 1 cut(s) 2023
Kzo9I GATC 5 cut(s) 683, 875, 1105, 1943, 2074
LmnI GCTCC 4 cut(s) 164, 172, 542, 1401
Lsp1109I GCAGC 8 cut(s) 193, 886, 1246, 1393, 1689, 1710, 1945, 2135
LweI GCATC 8 cut(s) 490, 554, 782, 1048, 1117, 1234, 1530, 1846
MabI ACCWGGT 1 cut(s) 400
MaeI CTAG 6 cut(s) 351, 879, 993, 1019, 2079, 2093
MaeII ACGT 3 cut(s) 5, 152, 948
MalI GATC 5 cut(s) 685, 877, 1107, 1945, 2076
MboI GATC 5 cut(s) 683, 875, 1105, 1943, 2074
MfeI CAATTG 1 cut(s) 1872
MflI RGATCY 2 cut(s) 875, 2074
MhlI GDGCHC 3 cut(s) 169, 316, 886
MlsI TGGCCA 1 cut(s) 426
MluCI AATT 8 cut(s) 254, 589, 920, 982, 1319, 1872, 1908, 2047
MluNI TGGCCA 1 cut(s) 426
MlyI GAGTC 1 cut(s) 518
MmeI TCCRAC 2 cut(s) 758, 2038
Mox20I TGGCCA 1 cut(s) 426
Mph1103I ATGCAT 1 cut(s) 1524
MroXI GAANNNNTTC 1 cut(s) 1550
MscI TGGCCA 1 cut(s) 426
MslI CAYNNNNRTG 3 cut(s) 75, 711, 834
Msp20I TGGCCA 1 cut(s) 426
MspA1I CMGCKG 3 cut(s) 206, 1958, 1964
MspI CCGG 2 cut(s) 249, 1349
MspR9I CCNGG 6 cut(s) 188, 249, 402, 962, 1349, 1680
MunI CAATTG 1 cut(s) 1872
MvaI CCWGG 4 cut(s) 188, 402, 962, 1680
MvnI CGCG 3 cut(s) 1124, 1778, 1838
MwoI GCNNNNNNNGC 3 cut(s) 423, 1028, 1877
NciI CCSGG 2 cut(s) 249, 1349
NcoI CCATGG 1 cut(s) 1210
NdeI CATATG 1 cut(s) 1237
NdeII GATC 5 cut(s) 683, 875, 1105, 1943, 2074
NlaIV GGNNCC 2 cut(s) 1689, 2076
NmuCI GTSAC 7 cut(s) 649, 700, 747, 850, 1489, 1747, 1993
NsiI ATGCAT 1 cut(s) 1524
NspI RCATGY 4 cut(s) 74, 196, 698, 755
PaeI GCATGC 1 cut(s) 698
PciI ACATGT 1 cut(s) 751
PdmI GAANNNNTTC 1 cut(s) 1550
PfeI GAWTC 7 cut(s) 94, 242, 643, 996, 1558, 1913, 2036
PkrI GCNGC 9 cut(s) 208, 901, 1261, 1383, 1704, 1725, 1960, 1963, 2125
PleI GAGTC 1 cut(s) 518
PpsI GAGTC 1 cut(s) 518
Ppu21I YACGTR 1 cut(s) 153
PpuMI RGGWCCY 1 cut(s) 1688
PscI ACATGT 1 cut(s) 751
PshAI GACNNNNGTC 1 cut(s) 1790
Psp124BI GAGCTC 1 cut(s) 169
Psp5II RGGWCCY 1 cut(s) 1688
Psp6I CCWGG 4 cut(s) 186, 400, 960, 1678
PspFI CCCAGC 2 cut(s) 739, 1684
PspGI CCWGG 4 cut(s) 186, 400, 960, 1678
PspN4I GGNNCC 2 cut(s) 1689, 2076
PspPI GGNCC 7 cut(s) 262, 290, 936, 989, 1346, 1606, 1688
PspPPI RGGWCCY 1 cut(s) 1688
PstI CTGCAG 1 cut(s) 1264
PstNI CAGNNNCTG 1 cut(s) 599
PsuI RGATCY 2 cut(s) 875, 2074
PvuII CAGCTG 1 cut(s) 1958
RsaI GTAC 9 cut(s) 40, 151, 155, 232, 305, 951, 1084, 1598, 1677
RsaNI GTAC 9 cut(s) 39, 150, 154, 231, 304, 950, 1083, 1597, 1676
RseI CAYNNNNRTG 3 cut(s) 75, 711, 834
SacI GAGCTC 1 cut(s) 169
SatI GCNGC 9 cut(s) 207, 900, 1260, 1382, 1703, 1724, 1959, 1962, 2124
Sau3AI GATC 5 cut(s) 683, 875, 1105, 1943, 2074
Sau96I GGNCC 7 cut(s) 262, 290, 936, 989, 1346, 1606, 1688
ScaI AGTACT 1 cut(s) 40
SchI GAGTC 1 cut(s) 518
ScrFI CCNGG 6 cut(s) 188, 249, 402, 962, 1349, 1680
SduI GDGCHC 3 cut(s) 169, 316, 886
SexAI ACCWGGT 1 cut(s) 400
SfaNI GCATC 8 cut(s) 490, 554, 782, 1048, 1117, 1234, 1530, 1846
SfcI CTRYAG 2 cut(s) 1260, 1998
SinI GGWCC 5 cut(s) 262, 290, 989, 1606, 1688
SmiMI CAYNNNNRTG 3 cut(s) 75, 711, 834
SmlI CTYRAG 3 cut(s) 885, 1822, 2133
SmoI CTYRAG 3 cut(s) 885, 1822, 2133
SnaBI TACGTA 1 cut(s) 153
SphI GCATGC 1 cut(s) 698
Sse9I AATT 8 cut(s) 254, 589, 920, 982, 1319, 1872, 1908, 2047
SsiI CCGC 7 cut(s) 204, 902, 1124, 1334, 1696, 1962, 2103
SspI AATATT 1 cut(s) 1551
SspMI CTAG 6 cut(s) 351, 879, 993, 1019, 2079, 2093
SstI GAGCTC 1 cut(s) 169
StyD4I CCNGG 6 cut(s) 186, 247, 400, 960, 1347, 1678
StyI CCWWGG 2 cut(s) 1210, 2040
TaaI ACNGT 8 cut(s) 230, 269, 369, 432, 515, 1610, 1999, 2056
TaiI ACGT 3 cut(s) 8, 155, 951
TaqI TCGA 2 cut(s) 620, 913
TasI AATT 8 cut(s) 254, 589, 920, 982, 1319, 1872, 1908, 2047
TatI WGTACW 4 cut(s) 38, 230, 303, 1596
TauI GCSGC 1 cut(s) 1964
TfiI GAWTC 7 cut(s) 94, 242, 643, 996, 1558, 1913, 2036
TscAI CASTG 2 cut(s) 1494, 2002
TseFI GTSAC 7 cut(s) 649, 700, 747, 850, 1489, 1747, 1993
TseI GCWGC 8 cut(s) 206, 899, 1259, 1381, 1702, 1723, 1958, 2123
Tsp45I GTSAC 7 cut(s) 649, 700, 747, 850, 1489, 1747, 1993
TspDTI ATGAA 6 cut(s) 336, 656, 914, 1254, 1491, 1866
TspGWI ACGGA 2 cut(s) 1070, 1291
TspRI CASTG 2 cut(s) 1494, 2002
VneI GTGCAC 1 cut(s) 312
VpaK11BI GGWCC 5 cut(s) 262, 290, 989, 1606, 1688
XapI RAATTY 3 cut(s) 254, 589, 920
XceI RCATGY 4 cut(s) 74, 196, 698, 755
XmiI GTMKAC 2 cut(s) 434, 1898
XmnI GAANNNNTTC 1 cut(s) 1550
XspI CTAG 6 cut(s) 351, 879, 993, 1019, 2079, 2093
ZrmI AGTACT 1 cut(s) 40
Zsp2I ATGCAT 1 cut(s) 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.