RchiOBHm_Chr4g0426561

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0006149
Physical Location & Seq
Reverse (-)
52042473 .. 52047590
5118 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39560

Sequence Viewer

Length: 2064 bp
ATGTATAATGTTCCTGAACATGCAAATAATGACGTTTATATGATCCAAGGCATGGAACCAAATATGCATTTTACCACTCCCTTTGAACAAGTTGATGCCATGTACAACGAAGGAGCCCCCGAGTATGTTGTTGATCAGGGCATGTATTATCCTACTGCCACCAACTATGGGTACTACTGTACAGGATTTGAATCACCCGGTGAATGGGAGGACCAACGTAGGACTTTTGGTGTAGATGGTCCAGATGTCCAGTACACGGGTGTGCAAAATGAAAGTTTGCCTTATGTATATTATGCACCTGGCTATGGATATGCACAGACATCATACAACCCATACAACCCTTACATACCCGGTGCTATGATAGGTGTTGATGGCCAACAGTATTATACCGGCCCCCCTTATCAGAATTCTGTCTCTTCACCTGCTTATGTCCCTTTTGTTGCTCAGCCGGATGTCATTCCCAACAGTTCACCTGACTCTTTGTACGATACTGGAACATCTATTAATAGACCTGGTGGAAGAGGCCTTAAATATAATTTGAATTCAGCTTCTGGAGCCTTCCCTAACACTCCTAAGCCATCCCCGAATCAGATGAGCCCCTTGACTAGGTTATTAGAAAGGCCAAGAGGCAATGTTGGACCAAGCAAGCCAGCTGTAACTCATGGCAGTGTTTCTTCTGGTCGTTTTCCAAACCCTGCTCACCAGAGTAGAAGTGCATCCGGCTCAGTTCCAGCCGTGGATAACCTTTCAAATGGGAAAGTTTTGCCTCATCATAATCAATTGAAGGTAGCAATCCCCGTAGGTAATGGCTTGTCTGATTTTGGATCGGGTGCACAAGGACGAGATGCTGTGGCTAAGCTTCGGCCAAAGTTCCATGTTAGCAGGGCCTTGAATGATATACATGGTAATATAGAGCCGTTGAGTGAGCAGAATTGTGGTCCTAGAGTCAATAGATTAAAAAATCAATTAGCTGTTAAAGCCTACACGACCAAGGCAGGAGATAGTAATGCGCAAGGAAATATCATTATTCGCACTGATCAGTATAACAAGGACAATCTCCCAGTTGATTATGTGCATGCAAAATTTTTTGTAATAAAATCATACAGCGAGGATGATGTGCATAAGAGTGTTAAATACAATGTCTGGTCATCCACACCGCATGGCAACAAAAAACTAAGCAGTGCTTATGAAGATGCCCAACGAATAGCTGCAGGGAACCCTGGAGGCTGTCCTATCTTCCTCTTCTTTTCGGTAAATGCAAGTGGTCAATTCTGTGGCGTCGCAGAGATGGTTGGCCCGGTTGACTTCAACAAGGATATGGACTTTTGGCAGCAAGATAAATGGAGTGGGAGCTTCCCTGTTATTTGGCACATTGTCAAAGATGTGCCGAACACCAGTGTTAGGCACATCGTATTGGAGAACAATGAGAACAAGCCGGTGACTAATAGCAGGGATACACAAGAGATCATGTATAAGAAAGGCTTGGAGATGTTGAAAATATTCAAGAATCACATGATGAAGACCTCATTGCTTGATGACTTTATGTACTATGAAGACCGTCAGAAAATCATGCAGGATGAGAGAGGCAGGTTTCTTGTTAGAAATTTTGAGACTCCATTCTTAGTAACAGCATTGGGACCCCCACGCAAGCTGAACCCTGTTCGTGAGCTGCCTCACAGCAAAGAGGAAAAAGACACCAAACCTAATGATCCAAACAACTCAGAAAAGTCTCTGGTTTCTGCATCTGAGCAGATTTCCTCAAACTTAGATGTTAAAGATGCGAGTATTAGAAGTGAAAATTCAGAGAAAAAGGCACTTGAAGCAGAAGATGATGCTGTATCTACCTTAAAAATTAGTTTGCTTACTATTGATCCAAAGCAGGTGGAGCTTGATTCTTCAGCTGGTGCTGCTACTGCTACTTCAAAAAATGTTGATGTTGTCACTGTAGGCTCAATTCCTGTTAGAGTTAATGGATTTGCTGAATCCTTGGGTACTTTAACAGTTGGAACGATCCCACTGGATCCTAGAGCACTAAAACTCGAGAAGGGCAGTTCTCTTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

687

Amino Acids

75.67

Weight (kDa)

6.05

Isoelectric Point (pI)

35.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 360 - 502 1.7e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 430, 1870
Acc16I TGCGCA 1 cut(s) 1011
Acc36I ACCTGC 3 cut(s) 430, 1578, 1870
AccB7I CCANNNNNTGG 1 cut(s) 52
AciI CCGC 1 cut(s) 1157
AclWI GGATC 7 cut(s) 37, 832, 1703, 1865, 2005, 2015, 2028
AcoI YGGCCR 2 cut(s) 373, 863
AcsI RAATTY 5 cut(s) 406, 541, 1082, 1603, 1798
AcuI CTGAAG 1 cut(s) 1881
AcyI GRCGYC 1 cut(s) 1278
AdeI CACNNNGTG 1 cut(s) 200
AfaI GTAC 7 cut(s) 104, 173, 181, 254, 485, 1547, 1993
AfiI CCNNNNNNNGG 7 cut(s) 52, 168, 204, 256, 305, 606, 1401
AjnI CCWGG 3 cut(s) 298, 511, 1219
AleI CACNNNNGTG 1 cut(s) 260
Alw21I GWGCWC 2 cut(s) 835, 2032
Alw26I GTCTC 3 cut(s) 418, 1604, 1734
Alw44I GTGCAC 1 cut(s) 831
AlwI GGATC 7 cut(s) 37, 832, 1703, 1865, 2005, 2015, 2028
AlwNI CAGNNNCTG 1 cut(s) 551
Ama87I CYCGRG 2 cut(s) 119, 2039
AoxI GGCC 7 cut(s) 373, 391, 523, 620, 863, 885, 1294
ApaLI GTGCAC 1 cut(s) 831
ApeKI GCWGC 4 cut(s) 1208, 1330, 1669, 1907
ApoI RAATTY 5 cut(s) 406, 541, 1082, 1603, 1798
AseI ATTAAT 1 cut(s) 504
Asp700I GAANNNNTTC 1 cut(s) 1499
AspLEI GCGC 1 cut(s) 1012
AspS9I GGNCC 8 cut(s) 211, 239, 392, 638, 885, 938, 1295, 1637
AsuC2I CCSGG 3 cut(s) 198, 351, 1298
AsuHPI GGTGA 6 cut(s) 186, 212, 411, 462, 692, 1450
AvaI CYCGRG 2 cut(s) 119, 2039
AvaII GGWCC 5 cut(s) 211, 239, 638, 938, 1637
BaeGI GKGCMC 1 cut(s) 835
BaeI ACNNNNGTAYC 2 cut(s) 163, 196
BalI TGGCCA 1 cut(s) 375
BamHI GGATCC 1 cut(s) 2020
BanII GRGCYC 2 cut(s) 118, 599
BbsI GAAGAC 2 cut(s) 1526, 1560
Bbv12I GWGCWC 2 cut(s) 835, 2032
BbvI GCAGC 4 cut(s) 1195, 1342, 1656, 1894
BccI CCATC 4 cut(s) 230, 365, 586, 1282
BceAI ACGGC 2 cut(s) 719, 901
BciT130I CCWGG 3 cut(s) 300, 513, 1221
BciVI GTATCC 1 cut(s) 1447
BclI TGATCA 2 cut(s) 133, 1036
BcnI CCSGG 3 cut(s) 198, 351, 1298
BcoDI GTCTC 3 cut(s) 418, 1604, 1734
BfaI CTAG 3 cut(s) 606, 942, 2025
BfmI CTRYAG 2 cut(s) 1209, 1944
BfuAI ACCTGC 3 cut(s) 430, 1578, 1870
BfuI GTATCC 1 cut(s) 1447
BisI GCNGC 4 cut(s) 1209, 1331, 1670, 1908
BlpI GCTNAGC 2 cut(s) 444, 855
BlsI GCNGC 4 cut(s) 1210, 1332, 1671, 1909
Bme1390I CCNGG 6 cut(s) 198, 300, 351, 513, 1221, 1298
Bme18I GGWCC 5 cut(s) 211, 239, 638, 938, 1637
BmeT110I CYCGRG 2 cut(s) 119, 2039
BmgT120I GGNCC 8 cut(s) 211, 239, 392, 638, 885, 938, 1295, 1637
BmiI GGNNCC 8 cut(s) 57, 115, 394, 556, 1217, 1638, 1639, 2022
BmrFI CCNGG 6 cut(s) 198, 300, 351, 513, 1221, 1298
BmrI ACTGGG 1 cut(s) 1055
BmsI GCATC 7 cut(s) 85, 725, 835, 1183, 1751, 1768, 1822
BmuI ACTGGG 1 cut(s) 1055
BpiI GAAGAC 2 cut(s) 1526, 1560
BpmI CTGGAG 2 cut(s) 573, 1242
Bpu10I CCTNAGC 1 cut(s) 573
Bpu1102I GCTNAGC 2 cut(s) 444, 855
BpuMI CCSGG 3 cut(s) 198, 351, 1298
BsaBI GATNNNNATC 1 cut(s) 190
BsaHI GRCGYC 1 cut(s) 1278
BsaJI CCNNGG 5 cut(s) 46, 735, 990, 1219, 1986
Bsc4I CCNNNNNNNGG 7 cut(s) 52, 168, 204, 256, 305, 606, 1401
Bse118I RCCGGY 2 cut(s) 389, 1435
Bse1I ACTGG 5 cut(s) 250, 496, 1061, 1395, 2022
Bse3DI GCAATG 2 cut(s) 637, 1526
Bse8I GATNNNNATC 1 cut(s) 190
BseBI CCWGG 3 cut(s) 300, 513, 1221
BseDI CCNNGG 5 cut(s) 46, 735, 990, 1219, 1986
BseGI GGATG 6 cut(s) 457, 578, 716, 1117, 1148, 1582
BseJI GATNNNNATC 1 cut(s) 190
BseLI CCNNNNNNNGG 7 cut(s) 52, 168, 204, 256, 305, 606, 1401
BseMI GCAATG 2 cut(s) 637, 1526
BseMII CTCAG 4 cut(s) 458, 738, 1734, 1737
BseNI ACTGG 5 cut(s) 250, 496, 1061, 1395, 2022
BseSI GKGCMC 1 cut(s) 835
BseXI GCAGC 4 cut(s) 1195, 1342, 1656, 1894
BshFI GGCC 7 cut(s) 375, 393, 525, 622, 865, 887, 1296
BsiHKAI GWGCWC 2 cut(s) 835, 2032
BsiHKCI CYCGRG 2 cut(s) 119, 2039
BsiSI CCGG 7 cut(s) 198, 351, 390, 449, 720, 1298, 1436
BslFI GGGAC 2 cut(s) 416, 1650
BslI CCNNNNNNNGG 7 cut(s) 52, 168, 204, 256, 305, 606, 1401
BsmAI GTCTC 3 cut(s) 418, 1604, 1734
BsmFI GGGAC 2 cut(s) 416, 1650
BsnI GGCC 7 cut(s) 375, 393, 525, 622, 865, 887, 1296
BsoBI CYCGRG 2 cut(s) 119, 2039
Bsp1286I GDGCHC 4 cut(s) 118, 599, 835, 2032
Bsp1407I TGTACA 2 cut(s) 102, 179
Bsp143I GATC 9 cut(s) 42, 133, 824, 1036, 1464, 1708, 1870, 2010, 2020
Bsp1720I GCTNAGC 2 cut(s) 444, 855
BspACI CCGC 1 cut(s) 1157
BspANI GGCC 7 cut(s) 375, 393, 525, 622, 865, 887, 1296
BspCNI CTCAG 4 cut(s) 457, 737, 1733, 1738
BspLI GGNNCC 8 cut(s) 57, 115, 394, 556, 1217, 1638, 1639, 2022
BspMAI CTGCAG 1 cut(s) 1213
BspMI ACCTGC 3 cut(s) 430, 1578, 1870
BspPI GGATC 7 cut(s) 37, 832, 1703, 1865, 2005, 2015, 2028
BsrDI GCAATG 2 cut(s) 637, 1526
BsrFI RCCGGY 2 cut(s) 389, 1435
BsrGI TGTACA 2 cut(s) 102, 179
BsrI ACTGG 5 cut(s) 250, 496, 1061, 1395, 2022
BssAI RCCGGY 2 cut(s) 389, 1435
BssECI CCNNGG 5 cut(s) 46, 735, 990, 1219, 1986
BssMI GATC 9 cut(s) 42, 133, 824, 1036, 1464, 1708, 1870, 2010, 2020
BssNI GRCGYC 1 cut(s) 1278
BssT1I CCWWGG 3 cut(s) 46, 990, 1986
Bst2UI CCWGG 3 cut(s) 300, 513, 1221
Bst4CI ACNGT 6 cut(s) 179, 381, 467, 1559, 1945, 2002
Bst6I CTCTTC 3 cut(s) 421, 514, 1247
BstACI GRCGYC 1 cut(s) 1278
BstAUI TGTACA 2 cut(s) 102, 179
BstC8I GCNNGC 4 cut(s) 647, 651, 1077, 1649
BstDEI CTNAG 9 cut(s) 444, 573, 724, 855, 1175, 1621, 1720, 1746, 1765
BstDSI CCRYGG 1 cut(s) 735
BstENI CCTNNNNNAGG 1 cut(s) 604
BstF5I GGATG 6 cut(s) 457, 578, 716, 1117, 1148, 1582
BstHHI GCGC 1 cut(s) 1012
BstKTI GATC 9 cut(s) 45, 136, 827, 1039, 1467, 1711, 1873, 2013, 2023
BstMAI GTCTC 3 cut(s) 418, 1604, 1734
BstMBI GATC 9 cut(s) 42, 133, 824, 1036, 1464, 1708, 1870, 2010, 2020
BstMWI GCNNNNNNNGC 6 cut(s) 554, 977, 1820, 1885, 1907, 1913
BstNI CCWGG 3 cut(s) 300, 513, 1221
BstNSI RCATGY 3 cut(s) 23, 145, 1079
BstSCI CCNGG 6 cut(s) 196, 298, 349, 511, 1219, 1296
BstSFI CTRYAG 2 cut(s) 1209, 1944
BstSLI GKGCMC 1 cut(s) 835
BstV1I GCAGC 4 cut(s) 1195, 1342, 1656, 1894
BstV2I GAAGAC 2 cut(s) 1526, 1560
BstX2I RGATCY 1 cut(s) 2020
BstYI RGATCY 1 cut(s) 2020
BsuI GTATCC 1 cut(s) 1447
BsuRI GGCC 7 cut(s) 375, 393, 525, 622, 865, 887, 1296
BtgI CCRYGG 1 cut(s) 735
BtsCI GGATG 6 cut(s) 457, 578, 716, 1117, 1148, 1582
BtsI GCAGTG 2 cut(s) 673, 1186
BtsIMutI CAGTG 6 cut(s) 673, 1032, 1186, 1402, 1941, 2015
BveI ACCTGC 3 cut(s) 430, 1578, 1870
Cac8I GCNNGC 4 cut(s) 647, 651, 1077, 1649
CaiI CAGNNNCTG 1 cut(s) 551
CfoI GCGC 1 cut(s) 1012
Cfr10I RCCGGY 2 cut(s) 389, 1435
Cfr13I GGNCC 8 cut(s) 211, 239, 392, 638, 885, 938, 1295, 1637
CseI GACGC 1 cut(s) 1267
CsiI ACCWGGT 1 cut(s) 511
Csp6I GTAC 7 cut(s) 103, 172, 180, 253, 484, 1546, 1992
CspCI CAANNNNNGTGG 4 cut(s) 64, 99, 1863, 1898
CviQI GTAC 7 cut(s) 103, 172, 180, 253, 484, 1546, 1992
DdeI CTNAG 9 cut(s) 444, 573, 724, 855, 1175, 1621, 1720, 1746, 1765
DpnI GATC 9 cut(s) 44, 135, 826, 1038, 1466, 1710, 1872, 2012, 2022
DpnII GATC 9 cut(s) 42, 133, 824, 1036, 1464, 1708, 1870, 2010, 2020
DraIII CACNNNGTG 1 cut(s) 200
EaeI YGGCCR 2 cut(s) 373, 863
Eam1104I CTCTTC 3 cut(s) 421, 514, 1247
EarI CTCTTC 3 cut(s) 421, 514, 1247
Eco130I CCWWGG 3 cut(s) 46, 990, 1986
Eco147I AGGCCT 1 cut(s) 525
Eco24I GRGCYC 2 cut(s) 118, 599
Eco47I GGWCC 5 cut(s) 211, 239, 638, 938, 1637
Eco57I CTGAAG 1 cut(s) 1881
Eco88I CYCGRG 2 cut(s) 119, 2039
EcoNI CCTNNNNNAGG 1 cut(s) 604
EcoO109I RGGNCCY 2 cut(s) 885, 1637
EcoRI GAATTC 2 cut(s) 406, 541
EcoRII CCWGG 3 cut(s) 298, 511, 1219
EcoT14I CCWWGG 3 cut(s) 46, 990, 1986
EcoT22I ATGCAT 1 cut(s) 69
EcoT38I GRGCYC 2 cut(s) 118, 599
ErhI CCWWGG 3 cut(s) 46, 990, 1986
FalI AAGNNNNNCTT 6 cut(s) 265, 297, 1168, 1200, 1466, 1498
FaqI GGGAC 2 cut(s) 416, 1650
FbaI TGATCA 2 cut(s) 133, 1036
Fnu4HI GCNGC 4 cut(s) 1209, 1331, 1670, 1908
FokI GGATG 6 cut(s) 464, 565, 703, 1124, 1135, 1589
FriOI GRGCYC 2 cut(s) 118, 599
Fsp4HI GCNGC 4 cut(s) 1209, 1331, 1670, 1908
FspBI CTAG 3 cut(s) 606, 942, 2025
FspI TGCGCA 1 cut(s) 1011
GlaI GCGC 1 cut(s) 1011
GluI GCNGC 4 cut(s) 1209, 1331, 1670, 1908
GsuI CTGGAG 2 cut(s) 573, 1242
HaeIII GGCC 7 cut(s) 375, 393, 525, 622, 865, 887, 1296
HapII CCGG 7 cut(s) 198, 351, 390, 449, 720, 1298, 1436
HgaI GACGC 1 cut(s) 1267
HhaI GCGC 1 cut(s) 1012
Hin1I GRCGYC 1 cut(s) 1278
Hin6I GCGC 1 cut(s) 1010
HinP1I GCGC 1 cut(s) 1010
HincII GTYRAC 1 cut(s) 1303
HindII GTYRAC 1 cut(s) 1303
HindIII AAGCTT 1 cut(s) 857
HinfI GANTC 8 cut(s) 191, 476, 586, 945, 1507, 1612, 1892, 1982
HpaII CCGG 7 cut(s) 198, 351, 390, 449, 720, 1298, 1436
HphI GGTGA 6 cut(s) 186, 212, 411, 462, 692, 1450
Hpy166II GTNNAC 4 cut(s) 255, 470, 833, 1303
Hpy188I TCNGA 7 cut(s) 405, 591, 817, 1563, 1723, 1747, 1804
Hpy188III TCNNGA 6 cut(s) 14, 242, 552, 1504, 1664, 2041
Hpy8I GTNNAC 4 cut(s) 255, 470, 833, 1303
Hpy99I CGWCG 1 cut(s) 1283
HpyAV CCTTC 4 cut(s) 104, 568, 778, 2038
HpyCH4III ACNGT 6 cut(s) 179, 381, 467, 1559, 1945, 2002
HpyCH4IV ACGT 2 cut(s) 33, 217
HpyF10VI GCNNNNNNNGC 6 cut(s) 554, 977, 1820, 1885, 1907, 1913
HpyF3I CTNAG 9 cut(s) 444, 573, 724, 855, 1175, 1621, 1720, 1746, 1765
HpySE526I ACGT 2 cut(s) 33, 217
Hsp92I GRCGYC 1 cut(s) 1278
HspAI GCGC 1 cut(s) 1010
KflI GGGWCCC 1 cut(s) 1637
Ksp22I TGATCA 2 cut(s) 133, 1036
Kzo9I GATC 9 cut(s) 42, 133, 824, 1036, 1464, 1708, 1870, 2010, 2020
LmnI GCTCC 4 cut(s) 113, 554, 1350, 1885
Lsp1109I GCAGC 4 cut(s) 1195, 1342, 1656, 1894
LweI GCATC 7 cut(s) 85, 725, 835, 1183, 1751, 1768, 1822
MabI ACCWGGT 1 cut(s) 511
MaeI CTAG 3 cut(s) 606, 942, 2025
MaeII ACGT 2 cut(s) 33, 217
MaeIII GTNAC 4 cut(s) 655, 1438, 1624, 1939
MalI GATC 9 cut(s) 44, 135, 826, 1038, 1466, 1710, 1872, 2012, 2022
MboI GATC 9 cut(s) 42, 133, 824, 1036, 1464, 1708, 1870, 2010, 2020
MfeI CAATTG 1 cut(s) 779
MflI RGATCY 1 cut(s) 2020
MhlI GDGCHC 4 cut(s) 118, 599, 835, 2032
MlsI TGGCCA 1 cut(s) 375
MluNI TGGCCA 1 cut(s) 375
MlyI GAGTC 3 cut(s) 470, 954, 1606
MmeI TCCRAC 2 cut(s) 616, 1984
Mox20I TGGCCA 1 cut(s) 375
Mph1103I ATGCAT 1 cut(s) 69
MroXI GAANNNNTTC 1 cut(s) 1499
MscI TGGCCA 1 cut(s) 375
MslI CAYNNNNRTG 3 cut(s) 260, 666, 1125
Msp20I TGGCCA 1 cut(s) 375
MspA1I CMGCKG 2 cut(s) 653, 1901
MspI CCGG 7 cut(s) 198, 351, 390, 449, 720, 1298, 1436
MspR9I CCNGG 6 cut(s) 198, 300, 351, 513, 1221, 1298
MunI CAATTG 1 cut(s) 779
MvaI CCWGG 3 cut(s) 300, 513, 1221
MwoI GCNNNNNNNGC 6 cut(s) 554, 977, 1820, 1885, 1907, 1913
NciI CCSGG 3 cut(s) 198, 351, 1298
NdeII GATC 9 cut(s) 42, 133, 824, 1036, 1464, 1708, 1870, 2010, 2020
NlaIV GGNNCC 8 cut(s) 57, 115, 394, 556, 1217, 1638, 1639, 2022
NmuCI GTSAC 2 cut(s) 1438, 1939
NsbI TGCGCA 1 cut(s) 1011
NsiI ATGCAT 1 cut(s) 69
NspI RCATGY 3 cut(s) 23, 145, 1079
OliI CACNNNNGTG 1 cut(s) 260
PaeI GCATGC 1 cut(s) 1079
PaeR7I CTCGAG 1 cut(s) 2039
PaqCI CACCTGC 2 cut(s) 430, 1870
PceI AGGCCT 1 cut(s) 525
PdmI GAANNNNTTC 1 cut(s) 1499
PfeI GAWTC 5 cut(s) 191, 586, 1507, 1892, 1982
PflMI CCANNNNNTGG 1 cut(s) 52
PkrI GCNGC 4 cut(s) 1210, 1332, 1671, 1909
PleI GAGTC 3 cut(s) 470, 953, 1606
PpsI GAGTC 3 cut(s) 470, 953, 1606
PpuMI RGGWCCY 1 cut(s) 1637
PshBI ATTAAT 1 cut(s) 504
Psp5II RGGWCCY 1 cut(s) 1637
Psp6I CCWGG 3 cut(s) 298, 511, 1219
PspGI CCWGG 3 cut(s) 298, 511, 1219
PspN4I GGNNCC 8 cut(s) 57, 115, 394, 556, 1217, 1638, 1639, 2022
PspPI GGNCC 8 cut(s) 211, 239, 392, 638, 885, 938, 1295, 1637
PspPPI RGGWCCY 1 cut(s) 1637
PstI CTGCAG 1 cut(s) 1213
PstNI CAGNNNCTG 1 cut(s) 551
PsuI RGATCY 1 cut(s) 2020
PvuII CAGCTG 2 cut(s) 653, 1901
RsaI GTAC 7 cut(s) 104, 173, 181, 254, 485, 1547, 1993
RsaNI GTAC 7 cut(s) 103, 172, 180, 253, 484, 1546, 1992
RseI CAYNNNNRTG 3 cut(s) 260, 666, 1125
SatI GCNGC 4 cut(s) 1209, 1331, 1670, 1908
Sau3AI GATC 9 cut(s) 42, 133, 824, 1036, 1464, 1708, 1870, 2010, 2020
Sau96I GGNCC 8 cut(s) 211, 239, 392, 638, 885, 938, 1295, 1637
SchI GAGTC 3 cut(s) 470, 954, 1606
ScrFI CCNGG 6 cut(s) 198, 300, 351, 513, 1221, 1298
SduI GDGCHC 4 cut(s) 118, 599, 835, 2032
SexAI ACCWGGT 1 cut(s) 511
SfaNI GCATC 7 cut(s) 85, 725, 835, 1183, 1751, 1768, 1822
SfcI CTRYAG 2 cut(s) 1209, 1944
Sfr274I CTCGAG 1 cut(s) 2039
SinI GGWCC 5 cut(s) 211, 239, 638, 938, 1637
SlaI CTCGAG 1 cut(s) 2039
SmiMI CAYNNNNRTG 3 cut(s) 260, 666, 1125
SmlI CTYRAG 1 cut(s) 2039
SmoI CTYRAG 1 cut(s) 2039
SphI GCATGC 1 cut(s) 1079
SseBI AGGCCT 1 cut(s) 525
SsiI CCGC 1 cut(s) 1157
SspI AATATT 1 cut(s) 1500
SspMI CTAG 3 cut(s) 606, 942, 2025
StuI AGGCCT 1 cut(s) 525
StyD4I CCNGG 6 cut(s) 196, 298, 349, 511, 1219, 1296
StyI CCWWGG 3 cut(s) 46, 990, 1986
TaaI ACNGT 6 cut(s) 179, 381, 467, 1559, 1945, 2002
TaiI ACGT 2 cut(s) 36, 220
TaqI TCGA 1 cut(s) 2040
TatI WGTACW 4 cut(s) 102, 179, 252, 1545
TfiI GAWTC 5 cut(s) 191, 586, 1507, 1892, 1982
TscAI CASTG 6 cut(s) 673, 1039, 1186, 1402, 1948, 2022
TseFI GTSAC 2 cut(s) 1438, 1939
TseI GCWGC 4 cut(s) 1208, 1330, 1669, 1907
Tsp45I GTSAC 2 cut(s) 1438, 1939
TspDTI ATGAA 4 cut(s) 285, 1203, 1532, 1566
TspRI CASTG 6 cut(s) 673, 1039, 1186, 1402, 1948, 2022
Van91I CCANNNNNTGG 1 cut(s) 52
VneI GTGCAC 1 cut(s) 831
VpaK11BI GGWCC 5 cut(s) 211, 239, 638, 938, 1637
VspI ATTAAT 1 cut(s) 504
XagI CCTNNNNNAGG 1 cut(s) 604
XapI RAATTY 5 cut(s) 406, 541, 1082, 1603, 1798
XceI RCATGY 3 cut(s) 23, 145, 1079
XhoI CTCGAG 1 cut(s) 2039
XmnI GAANNNNTTC 1 cut(s) 1499
XspI CTAG 3 cut(s) 606, 942, 2025
Zsp2I ATGCAT 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.