Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001821.1

Orthogroup ID

OG0006149

Physical Location & Seq

Genomic Coordinates Reverse (-)

77975 .. 82158

Gene Structure 4184 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001821.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

atggtcaaccatggattgattgattcagctttttttctctcttggggtggcagtccttcaatcgaaatgtataatgttcctgaacatgcaaataatgacgtttatatgatccaaggcatggaaccaaatatgcattttacgactccctttgaacaagttgatgccatgtacaacgaaggagcccccgagtatgtagttgatcagggcatgtattatcctactgccaccaactatgggtactactgtacaggatttgaatcacccggtgaatgggaggaccaacgtaggacttttggtgtagatggtccagatgtccagtacacgggtgtgcaaaatgaaagtttgccttatgtatattatacacctggctatgggtatgcacagacatcatacaacccatacaacccttacatacctggtgctatgataggtgttgatggccaacagtattataccgtccccccttatcagaattctgtctcttcacctgcttatgtcccttttgttgctcagccggatgtcattcccaacagttcacctgactctttgtacgatactggaacatctattaatagacctggtggaagaggccttaaatataatttgaattcagcttctggagccttccctaacactcctaagccatcctcgaatcagatgagccccttgactaggttattagaaaggccaagaggcaatgttggaccaagcaagccagctgtaactcatggcagtgtttcttctggtcgttttccaaaccctgctcaccagagtagaagtgcatctggctcagttccagccgtggataacctttcaaatgggaaagttttgcctcatcataatcaattgaaggtagcaatccccgtaggtaatggcttgtctgattttggatcgggtgtacaaggacgagatgctgtggctaagcttcggccaaagttccatgttagcagggccttgaatgatatacatggtaatatagagccgttgagtgagcagaattgtggtcctagagtcaatagattaaaaaatcaattagctgttaaagcctacacgaccaaggcaggagatagtaatgcgcaaggaaatatcattattcgcactgatcagtataacaaggacaatctcccagttgattatgtgcatgcaaaattttttgtaataaaatcatacagcgaggatgatgtgcataagagtgttaaatacaatgtctggtcatccacaccgcatggaaacaaaaaactaagcagtgcttatgaagatgcccaacgaatagctgcagggaaccctggaggctgtcctattttcctcttcttttcggtaaatgcaagtggtcaattctgtggcgtcgcggagatggttggcccggttgacttcaacaaggatatggacttttggcagcaagataaatggagtgggagcttccctgttatttggcacattgtcaaagatgtgccgaacaccagtgttaggcacatcgtattggagaataatgagaacaagccggtgactaatagcagggatacacaagagatcatgtataagaaaggcttggagatgttgaaaatattcaagaatcacatgatgaagacctcattgcttgatgacttcatgtactatgaagaccgtcagaaaatcatgcaggatgagagaggcaggtttattgttagaaattttgagactccattcttagtaacagcattgggacccccacgcaagctgaaccctgttcgtgagctgcctcacagcaaagaggaaaaaaacaccaaacccaatgatgcaaacaactcagaaaagtctctggtttctgcatctgagcagatttcctcaaacttagatgttaaagatgcaagtattagtagtgaaaattcagagaaaaaggcacttgaagcagaagatgatgctgtatctaccttaaaaattagttcgcttactattgatccgaagcaggtggagcttgattcttcagctggtgctgctactgctacttcaaaaaatgttgatgttgtcactgtaggctcaattcctgttagagttaatggatttgctgaatccttgggtactttaacagttggaacgatccctctggatcctagagcactaaaactcgagaagggcagttctcttaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

YTH

Protein Analysis

709

Amino Acids

77.98

Weight (kDa)

5.93

Isoelectric Point (pI)

35.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48110 AT1G48110
fragaria_vesca	FvH4_4g21030 FvH4_4g21030
malus_domestica	MD13G1146000.v1.1 MD16G1140100.v1.1
prunus_persica	Prupe.1G109700_v2.0.a1 Prupe.1G109700_v2.0.a1 Prupe.1G109700_v2.0.a1 Prupe.1G109700_v2.0.a1 Prupe.1G109700_v2.0.a1
pyrus_communis	pycom13g12550 pycom13g12560 pycom16g12420
rosa_chinensis	RchiOBHm_Chr4g0426561
rosa_laevigata	RLG00000007290
rosa_multiflora	Rmu_sc0001821.1_g000008
rosa_roxburghii	Rroxscaffold_5G00368570
rosa_rugosa	Rorug04G0213100 Rorug04G0213200 Rorug04G0213300 Rorug04G0213400
rosa_samantha	Rh4AG268600 Rh4BG274900 Rh4CG289200 Rh4DG271700
rosa_wichuraiana	Rw4G023300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	496, 1936
Acc16I	TGCGCA	1 cut(s)	1077
Acc36I	ACCTGC	3 cut(s)	496, 1644, 1936
AccB7I	CCANNNNNTGG	1 cut(s)	118
AccII	CGCG	1 cut(s)	1349
AciI	CCGC	2 cut(s)	1223, 1349
AclWI	GGATC	6 cut(s)	103, 898, 1931, 2071, 2081, 2094
AcoI	YGGCCR	2 cut(s)	439, 929
AcsI	RAATTY	5 cut(s)	472, 607, 1148, 1669, 1864
AcuI	CTGAAG	1 cut(s)	1947
AcyI	GRCGYC	1 cut(s)	1344
AdeI	CACNNNGTG	1 cut(s)	266
AfaI	GTAC	8 cut(s)	170, 239, 247, 320, 551, 900, 1613, 2059
AfiI	CCNNNNNNNGG	7 cut(s)	118, 234, 270, 322, 371, 672, 1467
AjnI	CCWGG	4 cut(s)	364, 415, 577, 1285
AleI	CACNNNNGTG	1 cut(s)	326
Alw21I	GWGCWC	1 cut(s)	2098
Alw26I	GTCTC	3 cut(s)	484, 1670, 1800
AlwI	GGATC	6 cut(s)	103, 898, 1931, 2071, 2081, 2094
AlwNI	CAGNNNCTG	1 cut(s)	617
Ama87I	CYCGRG	2 cut(s)	185, 2105
AoxI	GGCC	6 cut(s)	439, 589, 686, 929, 951, 1360
ApeKI	GCWGC	4 cut(s)	1274, 1396, 1735, 1973
ApoI	RAATTY	5 cut(s)	472, 607, 1148, 1669, 1864
AseI	ATTAAT	1 cut(s)	570
Asp700I	GAANNNNTTC	1 cut(s)	1565
AspLEI	GCGC	1 cut(s)	1078
AspS9I	GGNCC	7 cut(s)	277, 305, 704, 951, 1004, 1361, 1703
AsuC2I	CCSGG	2 cut(s)	264, 1364
AsuHPI	GGTGA	6 cut(s)	252, 278, 477, 528, 758, 1516
AvaI	CYCGRG	2 cut(s)	185, 2105
AvaII	GGWCC	5 cut(s)	277, 305, 704, 1004, 1703
BaeI	ACNNNNGTAYC	2 cut(s)	229, 262
BalI	TGGCCA	1 cut(s)	441
BamHI	GGATCC	1 cut(s)	2086
BanII	GRGCYC	2 cut(s)	184, 665
BbsI	GAAGAC	2 cut(s)	1592, 1626
Bbv12I	GWGCWC	1 cut(s)	2098
BbvI	GCAGC	4 cut(s)	1261, 1408, 1722, 1960
BccI	CCATC	4 cut(s)	296, 431, 652, 1348
BceAI	ACGGC	2 cut(s)	785, 967
BciT130I	CCWGG	4 cut(s)	366, 417, 579, 1287
BciVI	GTATCC	1 cut(s)	1513
BclI	TGATCA	2 cut(s)	199, 1102
BcnI	CCSGG	2 cut(s)	264, 1364
BcoDI	GTCTC	3 cut(s)	484, 1670, 1800
BfaI	CTAG	3 cut(s)	672, 1008, 2091
BfmI	CTRYAG	2 cut(s)	1275, 2010
BfuAI	ACCTGC	3 cut(s)	496, 1644, 1936
BfuI	GTATCC	1 cut(s)	1513
BisI	GCNGC	4 cut(s)	1275, 1397, 1736, 1974
BlpI	GCTNAGC	2 cut(s)	510, 921
BlsI	GCNGC	4 cut(s)	1276, 1398, 1737, 1975
Bme1390I	CCNGG	6 cut(s)	264, 366, 417, 579, 1287, 1364
Bme18I	GGWCC	5 cut(s)	277, 305, 704, 1004, 1703
BmeT110I	CYCGRG	2 cut(s)	185, 2105
BmgT120I	GGNCC	7 cut(s)	277, 305, 704, 951, 1004, 1361, 1703
BmiI	GGNNCC	7 cut(s)	123, 181, 622, 1283, 1704, 1705, 2088
BmrFI	CCNGG	6 cut(s)	264, 366, 417, 579, 1287, 1364
BmrI	ACTGGG	1 cut(s)	1121
BmsI	GCATC	8 cut(s)	151, 791, 901, 1249, 1765, 1817, 1834, 1888
BmuI	ACTGGG	1 cut(s)	1121
BpiI	GAAGAC	2 cut(s)	1592, 1626
BpmI	CTGGAG	2 cut(s)	639, 1308
Bpu10I	CCTNAGC	1 cut(s)	639
Bpu1102I	GCTNAGC	2 cut(s)	510, 921
BpuMI	CCSGG	2 cut(s)	264, 1364
BsaBI	GATNNNNATC	1 cut(s)	256
BsaHI	GRCGYC	1 cut(s)	1344
BsaJI	CCNNGG	6 cut(s)	10, 112, 801, 1056, 1285, 2052
Bsc4I	CCNNNNNNNGG	7 cut(s)	118, 234, 270, 322, 371, 672, 1467
Bse118I	RCCGGY	1 cut(s)	1501
Bse1I	ACTGG	4 cut(s)	316, 562, 1127, 1461
Bse3DI	GCAATG	2 cut(s)	703, 1592
Bse8I	GATNNNNATC	1 cut(s)	256
BseBI	CCWGG	4 cut(s)	366, 417, 579, 1287
BseDI	CCNNGG	6 cut(s)	10, 112, 801, 1056, 1285, 2052
BseGI	GGATG	5 cut(s)	523, 644, 1183, 1214, 1648
BseJI	GATNNNNATC	1 cut(s)	256
BseLI	CCNNNNNNNGG	7 cut(s)	118, 234, 270, 322, 371, 672, 1467
BseMI	GCAATG	2 cut(s)	703, 1592
BseMII	CTCAG	4 cut(s)	524, 804, 1800, 1803
BseNI	ACTGG	4 cut(s)	316, 562, 1127, 1461
BseXI	GCAGC	4 cut(s)	1261, 1408, 1722, 1960
Bsh1236I	CGCG	1 cut(s)	1349
BshFI	GGCC	6 cut(s)	441, 591, 688, 931, 953, 1362
BsiHKAI	GWGCWC	1 cut(s)	2098
BsiHKCI	CYCGRG	2 cut(s)	185, 2105
BsiSI	CCGG	4 cut(s)	264, 515, 1364, 1502
BslFI	GGGAC	3 cut(s)	443, 482, 1716
BslI	CCNNNNNNNGG	7 cut(s)	118, 234, 270, 322, 371, 672, 1467
BsmAI	GTCTC	3 cut(s)	484, 1670, 1800
BsmFI	GGGAC	3 cut(s)	443, 482, 1716
BsnI	GGCC	6 cut(s)	441, 591, 688, 931, 953, 1362
BsoBI	CYCGRG	2 cut(s)	185, 2105
Bsp1286I	GDGCHC	3 cut(s)	184, 665, 2098
Bsp1407I	TGTACA	3 cut(s)	168, 245, 898
Bsp143I	GATC	8 cut(s)	108, 199, 890, 1102, 1530, 1936, 2076, 2086
Bsp1720I	GCTNAGC	2 cut(s)	510, 921
Bsp19I	CCATGG	1 cut(s)	10
BspACI	CCGC	2 cut(s)	1223, 1349
BspANI	GGCC	6 cut(s)	441, 591, 688, 931, 953, 1362
BspCNI	CTCAG	4 cut(s)	523, 803, 1799, 1804
BspFNI	CGCG	1 cut(s)	1349
BspLI	GGNNCC	7 cut(s)	123, 181, 622, 1283, 1704, 1705, 2088
BspMAI	CTGCAG	1 cut(s)	1279
BspMI	ACCTGC	3 cut(s)	496, 1644, 1936
BspPI	GGATC	6 cut(s)	103, 898, 1931, 2071, 2081, 2094
BsrDI	GCAATG	2 cut(s)	703, 1592
BsrFI	RCCGGY	1 cut(s)	1501
BsrGI	TGTACA	3 cut(s)	168, 245, 898
BsrI	ACTGG	4 cut(s)	316, 562, 1127, 1461
BssAI	RCCGGY	1 cut(s)	1501
BssECI	CCNNGG	6 cut(s)	10, 112, 801, 1056, 1285, 2052
BssMI	GATC	8 cut(s)	108, 199, 890, 1102, 1530, 1936, 2076, 2086
BssNI	GRCGYC	1 cut(s)	1344
BssT1I	CCWWGG	4 cut(s)	10, 112, 1056, 2052
Bst2UI	CCWGG	4 cut(s)	366, 417, 579, 1287
Bst4CI	ACNGT	7 cut(s)	245, 447, 457, 533, 1625, 2011, 2068
Bst6I	CTCTTC	3 cut(s)	487, 580, 1313
BstACI	GRCGYC	1 cut(s)	1344
BstAUI	TGTACA	3 cut(s)	168, 245, 898
BstC8I	GCNNGC	4 cut(s)	713, 717, 1143, 1715
BstDEI	CTNAG	9 cut(s)	510, 639, 790, 921, 1241, 1687, 1786, 1812, 1831
BstDSI	CCRYGG	2 cut(s)	10, 801
BstENI	CCTNNNNNAGG	1 cut(s)	670
BstF5I	GGATG	5 cut(s)	523, 644, 1183, 1214, 1648
BstFNI	CGCG	1 cut(s)	1349
BstHHI	GCGC	1 cut(s)	1078
BstKTI	GATC	8 cut(s)	111, 202, 893, 1105, 1533, 1939, 2079, 2089
BstMAI	GTCTC	3 cut(s)	484, 1670, 1800
BstMBI	GATC	8 cut(s)	108, 199, 890, 1102, 1530, 1936, 2076, 2086
BstMWI	GCNNNNNNNGC	6 cut(s)	620, 1043, 1886, 1951, 1973, 1979
BstNI	CCWGG	4 cut(s)	366, 417, 579, 1287
BstNSI	RCATGY	3 cut(s)	89, 211, 1145
BstSCI	CCNGG	6 cut(s)	262, 364, 415, 577, 1285, 1362
BstSFI	CTRYAG	2 cut(s)	1275, 2010
BstUI	CGCG	1 cut(s)	1349
BstV1I	GCAGC	4 cut(s)	1261, 1408, 1722, 1960
BstV2I	GAAGAC	2 cut(s)	1592, 1626
BstX2I	RGATCY	1 cut(s)	2086
BstYI	RGATCY	1 cut(s)	2086
BsuI	GTATCC	1 cut(s)	1513
BsuRI	GGCC	6 cut(s)	441, 591, 688, 931, 953, 1362
BtgI	CCRYGG	2 cut(s)	10, 801
BtsCI	GGATG	5 cut(s)	523, 644, 1183, 1214, 1648
BtsI	GCAGTG	2 cut(s)	739, 1252
BtsIMutI	CAGTG	5 cut(s)	739, 1098, 1252, 1468, 2007
BveI	ACCTGC	3 cut(s)	496, 1644, 1936
Cac8I	GCNNGC	4 cut(s)	713, 717, 1143, 1715
CaiI	CAGNNNCTG	1 cut(s)	617
CfoI	GCGC	1 cut(s)	1078
Cfr10I	RCCGGY	1 cut(s)	1501
Cfr13I	GGNCC	7 cut(s)	277, 305, 704, 951, 1004, 1361, 1703
CseI	GACGC	1 cut(s)	1333
CsiI	ACCWGGT	2 cut(s)	415, 577
Csp6I	GTAC	8 cut(s)	169, 238, 246, 319, 550, 899, 1612, 2058
CviQI	GTAC	8 cut(s)	169, 238, 246, 319, 550, 899, 1612, 2058
DdeI	CTNAG	9 cut(s)	510, 639, 790, 921, 1241, 1687, 1786, 1812, 1831
DpnI	GATC	8 cut(s)	110, 201, 892, 1104, 1532, 1938, 2078, 2088
DpnII	GATC	8 cut(s)	108, 199, 890, 1102, 1530, 1936, 2076, 2086
DraIII	CACNNNGTG	1 cut(s)	266
EaeI	YGGCCR	2 cut(s)	439, 929
Eam1104I	CTCTTC	3 cut(s)	487, 580, 1313
EarI	CTCTTC	3 cut(s)	487, 580, 1313
Eco130I	CCWWGG	4 cut(s)	10, 112, 1056, 2052
Eco147I	AGGCCT	1 cut(s)	591
Eco24I	GRGCYC	2 cut(s)	184, 665
Eco47I	GGWCC	5 cut(s)	277, 305, 704, 1004, 1703
Eco57I	CTGAAG	1 cut(s)	1947
Eco88I	CYCGRG	2 cut(s)	185, 2105
EcoNI	CCTNNNNNAGG	1 cut(s)	670
EcoO109I	RGGNCCY	2 cut(s)	951, 1703
EcoRI	GAATTC	2 cut(s)	472, 607
EcoRII	CCWGG	4 cut(s)	364, 415, 577, 1285
EcoT14I	CCWWGG	4 cut(s)	10, 112, 1056, 2052
EcoT22I	ATGCAT	1 cut(s)	135
EcoT38I	GRGCYC	2 cut(s)	184, 665
ErhI	CCWWGG	4 cut(s)	10, 112, 1056, 2052
FalI	AAGNNNNNCTT	6 cut(s)	331, 363, 1234, 1266, 1532, 1564
FaqI	GGGAC	3 cut(s)	443, 482, 1716
FbaI	TGATCA	2 cut(s)	199, 1102
Fnu4HI	GCNGC	4 cut(s)	1275, 1397, 1736, 1974
FokI	GGATG	5 cut(s)	530, 631, 1190, 1201, 1655
FriOI	GRGCYC	2 cut(s)	184, 665
Fsp4HI	GCNGC	4 cut(s)	1275, 1397, 1736, 1974
FspBI	CTAG	3 cut(s)	672, 1008, 2091
FspI	TGCGCA	1 cut(s)	1077
GlaI	GCGC	1 cut(s)	1077
GluI	GCNGC	4 cut(s)	1275, 1397, 1736, 1974
GsuI	CTGGAG	2 cut(s)	639, 1308
HaeIII	GGCC	6 cut(s)	441, 591, 688, 931, 953, 1362
HapII	CCGG	4 cut(s)	264, 515, 1364, 1502
HgaI	GACGC	1 cut(s)	1333
HhaI	GCGC	1 cut(s)	1078
Hin1I	GRCGYC	1 cut(s)	1344
Hin6I	GCGC	1 cut(s)	1076
HinP1I	GCGC	1 cut(s)	1076
HincII	GTYRAC	2 cut(s)	7, 1369
HindII	GTYRAC	2 cut(s)	7, 1369
HindIII	AAGCTT	1 cut(s)	923
HpaII	CCGG	4 cut(s)	264, 515, 1364, 1502
HphI	GGTGA	6 cut(s)	252, 278, 477, 528, 758, 1516
Hpy166II	GTNNAC	5 cut(s)	7, 321, 536, 899, 1369
Hpy188I	TCNGA	8 cut(s)	471, 657, 883, 1629, 1789, 1813, 1870, 1941
Hpy188III	TCNNGA	7 cut(s)	80, 308, 618, 1570, 1730, 2084, 2107
Hpy8I	GTNNAC	5 cut(s)	7, 321, 536, 899, 1369
Hpy99I	CGWCG	1 cut(s)	1349
HpyAV	CCTTC	5 cut(s)	66, 170, 634, 844, 2104
HpyCH4III	ACNGT	7 cut(s)	245, 447, 457, 533, 1625, 2011, 2068
HpyCH4IV	ACGT	2 cut(s)	99, 283
HpyF10VI	GCNNNNNNNGC	6 cut(s)	620, 1043, 1886, 1951, 1973, 1979
HpyF3I	CTNAG	9 cut(s)	510, 639, 790, 921, 1241, 1687, 1786, 1812, 1831
HpySE526I	ACGT	2 cut(s)	99, 283
Hsp92I	GRCGYC	1 cut(s)	1344
HspAI	GCGC	1 cut(s)	1076
KflI	GGGWCCC	1 cut(s)	1703
Ksp22I	TGATCA	2 cut(s)	199, 1102
Kzo9I	GATC	8 cut(s)	108, 199, 890, 1102, 1530, 1936, 2076, 2086
LmnI	GCTCC	4 cut(s)	179, 620, 1416, 1951
Lsp1109I	GCAGC	4 cut(s)	1261, 1408, 1722, 1960
LweI	GCATC	8 cut(s)	151, 791, 901, 1249, 1765, 1817, 1834, 1888
MabI	ACCWGGT	2 cut(s)	415, 577
MaeI	CTAG	3 cut(s)	672, 1008, 2091
MaeII	ACGT	2 cut(s)	99, 283
MaeIII	GTNAC	4 cut(s)	721, 1504, 1690, 2005
MalI	GATC	8 cut(s)	110, 201, 892, 1104, 1532, 1938, 2078, 2088
MboI	GATC	8 cut(s)	108, 199, 890, 1102, 1530, 1936, 2076, 2086
MboII	GAAGA	9 cut(s)	474, 597, 732, 1268, 1300, 1597, 1631, 1904, 1953
MfeI	CAATTG	1 cut(s)	845
MflI	RGATCY	1 cut(s)	2086
MhlI	GDGCHC	3 cut(s)	184, 665, 2098
MlsI	TGGCCA	1 cut(s)	441
MluNI	TGGCCA	1 cut(s)	441
MlyI	GAGTC	4 cut(s)	136, 536, 1020, 1672
MmeI	TCCRAC	2 cut(s)	682, 2050
Mox20I	TGGCCA	1 cut(s)	441
Mph1103I	ATGCAT	1 cut(s)	135
MroXI	GAANNNNTTC	1 cut(s)	1565
MscI	TGGCCA	1 cut(s)	441
MslI	CAYNNNNRTG	3 cut(s)	326, 732, 1191
Msp20I	TGGCCA	1 cut(s)	441
MspA1I	CMGCKG	2 cut(s)	719, 1967
MspI	CCGG	4 cut(s)	264, 515, 1364, 1502
MspR9I	CCNGG	6 cut(s)	264, 366, 417, 579, 1287, 1364
MunI	CAATTG	1 cut(s)	845
MvaI	CCWGG	4 cut(s)	366, 417, 579, 1287
MvnI	CGCG	1 cut(s)	1349
MwoI	GCNNNNNNNGC	6 cut(s)	620, 1043, 1886, 1951, 1973, 1979
NciI	CCSGG	2 cut(s)	264, 1364
NcoI	CCATGG	1 cut(s)	10
NdeII	GATC	8 cut(s)	108, 199, 890, 1102, 1530, 1936, 2076, 2086
NlaIV	GGNNCC	7 cut(s)	123, 181, 622, 1283, 1704, 1705, 2088
NmuCI	GTSAC	2 cut(s)	1504, 2005
NsbI	TGCGCA	1 cut(s)	1077
NsiI	ATGCAT	1 cut(s)	135
NspI	RCATGY	3 cut(s)	89, 211, 1145
OliI	CACNNNNGTG	1 cut(s)	326
PaeI	GCATGC	1 cut(s)	1145
PaeR7I	CTCGAG	1 cut(s)	2105
PaqCI	CACCTGC	2 cut(s)	496, 1936
PceI	AGGCCT	1 cut(s)	591
PdmI	GAANNNNTTC	1 cut(s)	1565
PfeI	GAWTC	6 cut(s)	23, 257, 652, 1573, 1958, 2048
PflMI	CCANNNNNTGG	1 cut(s)	118
PkrI	GCNGC	4 cut(s)	1276, 1398, 1737, 1975
PleI	GAGTC	4 cut(s)	136, 536, 1019, 1672
PpsI	GAGTC	4 cut(s)	136, 536, 1019, 1672
PpuMI	RGGWCCY	1 cut(s)	1703
PshBI	ATTAAT	1 cut(s)	570
Psp5II	RGGWCCY	1 cut(s)	1703
Psp6I	CCWGG	4 cut(s)	364, 415, 577, 1285
PspGI	CCWGG	4 cut(s)	364, 415, 577, 1285
PspN4I	GGNNCC	7 cut(s)	123, 181, 622, 1283, 1704, 1705, 2088
PspPI	GGNCC	7 cut(s)	277, 305, 704, 951, 1004, 1361, 1703
PspPPI	RGGWCCY	1 cut(s)	1703
PstI	CTGCAG	1 cut(s)	1279
PstNI	CAGNNNCTG	1 cut(s)	617
PsuI	RGATCY	1 cut(s)	2086
PvuII	CAGCTG	2 cut(s)	719, 1967
RsaI	GTAC	8 cut(s)	170, 239, 247, 320, 551, 900, 1613, 2059
RsaNI	GTAC	8 cut(s)	169, 238, 246, 319, 550, 899, 1612, 2058
RseI	CAYNNNNRTG	3 cut(s)	326, 732, 1191
SatI	GCNGC	4 cut(s)	1275, 1397, 1736, 1974
Sau3AI	GATC	8 cut(s)	108, 199, 890, 1102, 1530, 1936, 2076, 2086
Sau96I	GGNCC	7 cut(s)	277, 305, 704, 951, 1004, 1361, 1703
SchI	GAGTC	4 cut(s)	136, 536, 1020, 1672
ScrFI	CCNGG	6 cut(s)	264, 366, 417, 579, 1287, 1364
SduI	GDGCHC	3 cut(s)	184, 665, 2098
SexAI	ACCWGGT	2 cut(s)	415, 577
SfaNI	GCATC	8 cut(s)	151, 791, 901, 1249, 1765, 1817, 1834, 1888
SfcI	CTRYAG	2 cut(s)	1275, 2010
Sfr274I	CTCGAG	1 cut(s)	2105
SinI	GGWCC	5 cut(s)	277, 305, 704, 1004, 1703
SlaI	CTCGAG	1 cut(s)	2105
SmiMI	CAYNNNNRTG	3 cut(s)	326, 732, 1191
SmlI	CTYRAG	1 cut(s)	2105
SmoI	CTYRAG	1 cut(s)	2105
SphI	GCATGC	1 cut(s)	1145
SseBI	AGGCCT	1 cut(s)	591
SsiI	CCGC	2 cut(s)	1223, 1349
SspI	AATATT	1 cut(s)	1566
SspMI	CTAG	3 cut(s)	672, 1008, 2091
StuI	AGGCCT	1 cut(s)	591
StyD4I	CCNGG	6 cut(s)	262, 364, 415, 577, 1285, 1362
StyI	CCWWGG	4 cut(s)	10, 112, 1056, 2052
TaaI	ACNGT	7 cut(s)	245, 447, 457, 533, 1625, 2011, 2068
TaiI	ACGT	2 cut(s)	102, 286
TaqI	TCGA	3 cut(s)	63, 650, 2106
TatI	WGTACW	5 cut(s)	168, 245, 318, 898, 1611
TfiI	GAWTC	6 cut(s)	23, 257, 652, 1573, 1958, 2048
TscAI	CASTG	5 cut(s)	739, 1105, 1252, 1468, 2014
TseFI	GTSAC	2 cut(s)	1504, 2005
TseI	GCWGC	4 cut(s)	1274, 1396, 1735, 1973
Tsp45I	GTSAC	2 cut(s)	1504, 2005
TspDTI	ATGAA	5 cut(s)	351, 1269, 1597, 1598, 1632
TspRI	CASTG	5 cut(s)	739, 1105, 1252, 1468, 2014
Van91I	CCANNNNNTGG	1 cut(s)	118
VpaK11BI	GGWCC	5 cut(s)	277, 305, 704, 1004, 1703
VspI	ATTAAT	1 cut(s)	570
XagI	CCTNNNNNAGG	1 cut(s)	670
XapI	RAATTY	5 cut(s)	472, 607, 1148, 1669, 1864
XceI	RCATGY	3 cut(s)	89, 211, 1145
XhoI	CTCGAG	1 cut(s)	2105
XmnI	GAANNNNTTC	1 cut(s)	1565
XspI	CTAG	3 cut(s)	672, 1008, 2091
Zsp2I	ATGCAT	1 cut(s)	135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.