Rh4AG268600

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0006149
Physical Location & Seq
Reverse (-)
58531478 .. 58535643
4166 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG268600.1

Sequence Viewer

Length: 1866 bp
ATGTGGTCAGGATTTGAATCACCCGGTGAATGGGAGGACCAACGTAGGACTTTTGGTGTAGATGGTCCAGATGTCCAGTACGCGGGTGCGCAAAATGAAAGTTTGCCTTATGTATATTATACACCTGGCTATGGATATGCACAGACTTCATACAACCCATACAACCCTTACATACCTGGTGCTATGATAGGTGTTGATGGCCAACAGTATTATACCGTCCCCCCTTATCAGAATTCTGTCTCTTCACCTGCTTATGTCCCTTTTGTTGCTCAGCCGGATGTCATTCCCAACAGTTCACCTGACTCTTTGTACGATACTGGAACATCTATTAATAGACCTGGTGGAAGAGGCCTTAAATATAATTTGAATTCAGCTTCTGCAGCCTTCCCTAACACTCCTAAGCCATCCTCGAATCAGATGAGCCCCTTGACTAGGTTATTAGAAAGGCCAAGAGGCAATGTTGGACCAAGCAAGCCAGCTGTAACTCATGGCAGTGTTTCTTCTGGTCGTTTTCCAAACCCTGCTCACCAGAGTAGAAGTGCATCCGGCTCAGATGGGAAAGTTTTGCCTCATCATAATCAATTGAAGGTAGCAATCCCTGTAGGTAATGGCTTGTCTGATTTTGGATCGGGTGCACAAGGACGAGATGCTGTGGCTAAGCTTCGGCCAAAGTTCCATGTTGGCAGGGCCTTGAATGATATACATGGTAATATAGAGCCGTTGAGTGAGCAGAATTGTGGTCCTAGAGTCAATAGATTAAAAAATCAATTAGCTGTTAAAGCCTACACAACCAAGGCAGGAGATAGTAATGCGCAAGGAAATATCATTATTCGCACTGATCAGTATAACAAGGATAATCTCCCAGTTGATTATGTGCATGCAAAATTTTTTGTAATAAAATCATACAGCGAGGATGATGTGCATAAGAGTGTTAAATACAATGTCTGGTCATCCACACCGCATGGCAACAAAAAACTAAGCAGTGCTTATGAAGATGCCCAACGAATAGCTGCAGGGAACCCTGGAGGCTGTCCTATCTTCCTCTTCTTTTCGGTAAATGCAAGTGGTCAATTCTGTGGCGTCGCAGAGATGGTTGGCCCGGTTGACTTCAACAAGGATATGGACTTTTGGCAGCAAGATAAATGGAGTGGGAGCTTCCCTGTTATTTGGCACATTGTCAAAGATGTGTCGAACACCAGTGTTAGGCACATCGTATTGGAGAACAATGAGAACAAGCCGGTGACTAATAGCAGGGATACACAAGAGATCATGTATAAGAAAGGCTTGGAGATGTTGAAAATATTCAAGAATCACATGATGAAGACCTCATTGCTTGATGACTTTATGTACTATGAAGACCGTCAGAAAATCATGCAGGATGAGAGAGGCAGGTTTCTTGTTAGAAATTTTGAGACTCCATTCGTAGTAACAGCATTGGGACCCCCACGCAAGCTGAACCCTGTTCGTGAGCTGCCTCACAGCAAAGAGGAAAAAGACACCAAACCTAATGATGCAAACAACTCAGAAAAGTCTCTGGTTTCTGCATCTGAGCAGATTTCCTCAAACTTAGATGTTAAAGATGCGAGTATTAGGAGTGAAAATTCAGAGAAAAAGGCACTTGAAGCAGAAGATGATGCTGTATCTACCTTAAAAATTAGTTCGCTTACTATTGATCCAAAGCAGGTGGAGCTTGATTCTTCAGCTGGTGCTGCTACTGCTACTTCAAAAAATGTTGATGTTGTCACTGTAGGCTCAATTCCTGTTAGAGTTAATGGATTTGCTGAATCCTTGGGTACTTTAACTGTTGGAACGATCCCTCTGGATCCTAGAGCACTAAAACTCGAGAAGGGCAGTTCTCTTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

621

Amino Acids

68.09

Weight (kDa)

7.22

Isoelectric Point (pI)

32.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 294 - 436 5.4e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 256, 1672
Acc16I TGCGCA 2 cut(s) 90, 813
Acc36I ACCTGC 3 cut(s) 256, 1380, 1672
AccII CGCG 1 cut(s) 83
AciI CCGC 2 cut(s) 83, 959
AclWI GGATC 5 cut(s) 634, 1667, 1807, 1817, 1830
AcoI YGGCCR 2 cut(s) 199, 665
AcsI RAATTY 5 cut(s) 232, 367, 884, 1405, 1600
AcuI CTGAAG 1 cut(s) 1683
AcyI GRCGYC 1 cut(s) 1080
AdeI CACNNNGTG 1 cut(s) 26
AfaI GTAC 4 cut(s) 80, 311, 1349, 1795
AfiI CCNNNNNNNGG 5 cut(s) 30, 82, 131, 432, 1203
AgsI TTSAA 9 cut(s) 17, 367, 586, 694, 1111, 1297, 1306, 1622, 1725
AjnI CCWGG 4 cut(s) 124, 175, 337, 1021
Alw21I GWGCWC 2 cut(s) 637, 1834
Alw26I GTCTC 3 cut(s) 244, 1406, 1536
Alw44I GTGCAC 1 cut(s) 633
AlwI GGATC 5 cut(s) 634, 1667, 1807, 1817, 1830
AlwNI CAGNNNCTG 1 cut(s) 377
Ama87I CYCGRG 1 cut(s) 1841
AoxI GGCC 6 cut(s) 199, 349, 446, 665, 687, 1096
ApaLI GTGCAC 1 cut(s) 633
ApeKI GCWGC 5 cut(s) 380, 1010, 1132, 1471, 1709
ApoI RAATTY 5 cut(s) 232, 367, 884, 1405, 1600
AseI ATTAAT 1 cut(s) 330
Asp700I GAANNNNTTC 1 cut(s) 1301
AspLEI GCGC 2 cut(s) 91, 814
AspS9I GGNCC 7 cut(s) 37, 65, 464, 687, 740, 1097, 1439
AsuC2I CCSGG 2 cut(s) 24, 1100
AsuHPI GGTGA 6 cut(s) 12, 38, 237, 288, 518, 1252
AvaI CYCGRG 1 cut(s) 1841
AvaII GGWCC 5 cut(s) 37, 65, 464, 740, 1439
BaeGI GKGCMC 1 cut(s) 637
BalI TGGCCA 1 cut(s) 201
BamHI GGATCC 1 cut(s) 1822
BanII GRGCYC 1 cut(s) 425
BbsI GAAGAC 2 cut(s) 1328, 1362
Bbv12I GWGCWC 2 cut(s) 637, 1834
BbvI GCAGC 5 cut(s) 392, 997, 1144, 1458, 1696
BccI CCATC 5 cut(s) 56, 191, 412, 548, 1084
BceAI ACGGC 1 cut(s) 703
BciT130I CCWGG 4 cut(s) 126, 177, 339, 1023
BciVI GTATCC 1 cut(s) 1249
BclI TGATCA 1 cut(s) 838
BcnI CCSGG 2 cut(s) 24, 1100
BcoDI GTCTC 3 cut(s) 244, 1406, 1536
BfaI CTAG 3 cut(s) 432, 744, 1827
BfmI CTRYAG 4 cut(s) 378, 600, 1011, 1746
BfuAI ACCTGC 3 cut(s) 256, 1380, 1672
BfuI GTATCC 1 cut(s) 1249
BisI GCNGC 5 cut(s) 381, 1011, 1133, 1472, 1710
BlpI GCTNAGC 2 cut(s) 270, 657
BlsI GCNGC 5 cut(s) 382, 1012, 1134, 1473, 1711
Bme1390I CCNGG 6 cut(s) 24, 126, 177, 339, 1023, 1100
Bme18I GGWCC 5 cut(s) 37, 65, 464, 740, 1439
BmeT110I CYCGRG 1 cut(s) 1841
BmgT120I GGNCC 7 cut(s) 37, 65, 464, 687, 740, 1097, 1439
BmiI GGNNCC 4 cut(s) 1019, 1440, 1441, 1824
BmrFI CCNGG 6 cut(s) 24, 126, 177, 339, 1023, 1100
BmrI ACTGGG 1 cut(s) 857
BmsI GCATC 7 cut(s) 551, 637, 985, 1501, 1553, 1570, 1624
BmuI ACTGGG 1 cut(s) 857
BpiI GAAGAC 2 cut(s) 1328, 1362
BpmI CTGGAG 1 cut(s) 1044
Bpu10I CCTNAGC 1 cut(s) 399
Bpu1102I GCTNAGC 2 cut(s) 270, 657
BpuMI CCSGG 2 cut(s) 24, 1100
BsaBI GATNNNNATC 1 cut(s) 16
BsaHI GRCGYC 1 cut(s) 1080
BsaJI CCNNGG 3 cut(s) 792, 1021, 1788
Bsc4I CCNNNNNNNGG 5 cut(s) 30, 82, 131, 432, 1203
Bse118I RCCGGY 1 cut(s) 1237
Bse1I ACTGG 4 cut(s) 76, 322, 863, 1197
Bse3DI GCAATG 2 cut(s) 463, 1328
Bse8I GATNNNNATC 1 cut(s) 16
BseBI CCWGG 4 cut(s) 126, 177, 339, 1023
BseDI CCNNGG 3 cut(s) 792, 1021, 1788
BseGI GGATG 6 cut(s) 283, 404, 542, 919, 950, 1384
BseJI GATNNNNATC 1 cut(s) 16
BseLI CCNNNNNNNGG 5 cut(s) 30, 82, 131, 432, 1203
BseMI GCAATG 2 cut(s) 463, 1328
BseMII CTCAG 4 cut(s) 284, 564, 1536, 1539
BseNI ACTGG 4 cut(s) 76, 322, 863, 1197
BseSI GKGCMC 1 cut(s) 637
BseXI GCAGC 5 cut(s) 392, 997, 1144, 1458, 1696
Bsh1236I CGCG 1 cut(s) 83
BshFI GGCC 6 cut(s) 201, 351, 448, 667, 689, 1098
BsiHKAI GWGCWC 2 cut(s) 637, 1834
BsiHKCI CYCGRG 1 cut(s) 1841
BsiSI CCGG 5 cut(s) 24, 275, 546, 1100, 1238
BslFI GGGAC 3 cut(s) 203, 242, 1452
BslI CCNNNNNNNGG 5 cut(s) 30, 82, 131, 432, 1203
BsmAI GTCTC 3 cut(s) 244, 1406, 1536
BsmFI GGGAC 3 cut(s) 203, 242, 1452
BsnI GGCC 6 cut(s) 201, 351, 448, 667, 689, 1098
BsoBI CYCGRG 1 cut(s) 1841
Bsp1286I GDGCHC 3 cut(s) 425, 637, 1834
Bsp143I GATC 6 cut(s) 626, 838, 1266, 1672, 1812, 1822
Bsp1720I GCTNAGC 2 cut(s) 270, 657
BspACI CCGC 2 cut(s) 83, 959
BspANI GGCC 6 cut(s) 201, 351, 448, 667, 689, 1098
BspCNI CTCAG 4 cut(s) 283, 563, 1535, 1540
BspFNI CGCG 1 cut(s) 83
BspLI GGNNCC 4 cut(s) 1019, 1440, 1441, 1824
BspMAI CTGCAG 2 cut(s) 382, 1015
BspMI ACCTGC 3 cut(s) 256, 1380, 1672
BspPI GGATC 5 cut(s) 634, 1667, 1807, 1817, 1830
BsrDI GCAATG 2 cut(s) 463, 1328
BsrFI RCCGGY 1 cut(s) 1237
BsrI ACTGG 4 cut(s) 76, 322, 863, 1197
BssAI RCCGGY 1 cut(s) 1237
BssECI CCNNGG 3 cut(s) 792, 1021, 1788
BssMI GATC 6 cut(s) 626, 838, 1266, 1672, 1812, 1822
BssNI GRCGYC 1 cut(s) 1080
BssT1I CCWWGG 2 cut(s) 792, 1788
Bst2UI CCWGG 4 cut(s) 126, 177, 339, 1023
Bst4CI ACNGT 6 cut(s) 207, 217, 293, 1361, 1747, 1804
Bst6I CTCTTC 3 cut(s) 247, 340, 1049
BstACI GRCGYC 1 cut(s) 1080
BstC8I GCNNGC 4 cut(s) 473, 477, 879, 1451
BstDEI CTNAG 8 cut(s) 270, 399, 550, 657, 977, 1522, 1548, 1567
BstENI CCTNNNNNAGG 1 cut(s) 430
BstF5I GGATG 6 cut(s) 283, 404, 542, 919, 950, 1384
BstFNI CGCG 1 cut(s) 83
BstHHI GCGC 2 cut(s) 91, 814
BstKTI GATC 6 cut(s) 629, 841, 1269, 1675, 1815, 1825
BstMAI GTCTC 3 cut(s) 244, 1406, 1536
BstMBI GATC 6 cut(s) 626, 838, 1266, 1672, 1812, 1822
BstMWI GCNNNNNNNGC 6 cut(s) 380, 779, 1622, 1687, 1709, 1715
BstNI CCWGG 4 cut(s) 126, 177, 339, 1023
BstNSI RCATGY 1 cut(s) 881
BstSCI CCNGG 6 cut(s) 22, 124, 175, 337, 1021, 1098
BstSFI CTRYAG 4 cut(s) 378, 600, 1011, 1746
BstSLI GKGCMC 1 cut(s) 637
BstUI CGCG 1 cut(s) 83
BstV1I GCAGC 5 cut(s) 392, 997, 1144, 1458, 1696
BstV2I GAAGAC 2 cut(s) 1328, 1362
BstX2I RGATCY 1 cut(s) 1822
BstYI RGATCY 1 cut(s) 1822
BsuI GTATCC 1 cut(s) 1249
BsuRI GGCC 6 cut(s) 201, 351, 448, 667, 689, 1098
BtsCI GGATG 6 cut(s) 283, 404, 542, 919, 950, 1384
BtsI GCAGTG 2 cut(s) 499, 988
BtsIMutI CAGTG 5 cut(s) 499, 834, 988, 1204, 1743
BveI ACCTGC 3 cut(s) 256, 1380, 1672
Cac8I GCNNGC 4 cut(s) 473, 477, 879, 1451
CaiI CAGNNNCTG 1 cut(s) 377
CfoI GCGC 2 cut(s) 91, 814
Cfr10I RCCGGY 1 cut(s) 1237
Cfr13I GGNCC 7 cut(s) 37, 65, 464, 687, 740, 1097, 1439
CseI GACGC 1 cut(s) 1069
CsiI ACCWGGT 2 cut(s) 175, 337
Csp6I GTAC 4 cut(s) 79, 310, 1348, 1794
CspCI CAANNNNNGTGG 2 cut(s) 1665, 1700
CviAII CATG 8 cut(s) 488, 677, 704, 878, 962, 1270, 1315, 1372
CviQI GTAC 4 cut(s) 79, 310, 1348, 1794
DdeI CTNAG 8 cut(s) 270, 399, 550, 657, 977, 1522, 1548, 1567
DpnI GATC 6 cut(s) 628, 840, 1268, 1674, 1814, 1824
DpnII GATC 6 cut(s) 626, 838, 1266, 1672, 1812, 1822
DraIII CACNNNGTG 1 cut(s) 26
EaeI YGGCCR 2 cut(s) 199, 665
Eam1104I CTCTTC 3 cut(s) 247, 340, 1049
EarI CTCTTC 3 cut(s) 247, 340, 1049
Eco130I CCWWGG 2 cut(s) 792, 1788
Eco147I AGGCCT 1 cut(s) 351
Eco24I GRGCYC 1 cut(s) 425
Eco47I GGWCC 5 cut(s) 37, 65, 464, 740, 1439
Eco57I CTGAAG 1 cut(s) 1683
Eco88I CYCGRG 1 cut(s) 1841
EcoNI CCTNNNNNAGG 1 cut(s) 430
EcoO109I RGGNCCY 2 cut(s) 687, 1439
EcoRI GAATTC 2 cut(s) 232, 367
EcoRII CCWGG 4 cut(s) 124, 175, 337, 1021
EcoT14I CCWWGG 2 cut(s) 792, 1788
EcoT38I GRGCYC 1 cut(s) 425
ErhI CCWWGG 2 cut(s) 792, 1788
FaeI CATG 8 cut(s) 491, 680, 707, 881, 965, 1273, 1318, 1375
FalI AAGNNNNNCTT 6 cut(s) 91, 123, 970, 1002, 1268, 1300
FaqI GGGAC 3 cut(s) 203, 242, 1452
FatI CATG 8 cut(s) 487, 676, 703, 877, 961, 1269, 1314, 1371
FauI CCCGC 1 cut(s) 76
FbaI TGATCA 1 cut(s) 838
Fnu4HI GCNGC 5 cut(s) 381, 1011, 1133, 1472, 1710
FokI GGATG 6 cut(s) 290, 391, 529, 926, 937, 1391
FriOI GRGCYC 1 cut(s) 425
Fsp4HI GCNGC 5 cut(s) 381, 1011, 1133, 1472, 1710
FspBI CTAG 3 cut(s) 432, 744, 1827
FspI TGCGCA 2 cut(s) 90, 813
GlaI GCGC 2 cut(s) 90, 813
GluI GCNGC 5 cut(s) 381, 1011, 1133, 1472, 1710
GsuI CTGGAG 1 cut(s) 1044
HaeIII GGCC 6 cut(s) 201, 351, 448, 667, 689, 1098
HapII CCGG 5 cut(s) 24, 275, 546, 1100, 1238
HgaI GACGC 1 cut(s) 1069
HhaI GCGC 2 cut(s) 91, 814
Hin1I GRCGYC 1 cut(s) 1080
Hin1II CATG 8 cut(s) 491, 680, 707, 881, 965, 1273, 1318, 1375
Hin6I GCGC 2 cut(s) 89, 812
HinP1I GCGC 2 cut(s) 89, 812
HincII GTYRAC 1 cut(s) 1105
HindII GTYRAC 1 cut(s) 1105
HindIII AAGCTT 1 cut(s) 659
HinfI GANTC 8 cut(s) 17, 302, 412, 747, 1309, 1414, 1694, 1784
HpaII CCGG 5 cut(s) 24, 275, 546, 1100, 1238
HphI GGTGA 6 cut(s) 12, 38, 237, 288, 518, 1252
Hpy166II GTNNAC 3 cut(s) 296, 635, 1105
Hpy188I TCNGA 8 cut(s) 231, 417, 553, 619, 1365, 1525, 1549, 1606
Hpy188III TCNNGA 6 cut(s) 9, 68, 1306, 1466, 1820, 1843
Hpy8I GTNNAC 3 cut(s) 296, 635, 1105
Hpy99I CGWCG 1 cut(s) 1085
HpyAV CCTTC 3 cut(s) 394, 580, 1840
HpyCH4III ACNGT 6 cut(s) 207, 217, 293, 1361, 1747, 1804
HpyCH4IV ACGT 1 cut(s) 43
HpyF10VI GCNNNNNNNGC 6 cut(s) 380, 779, 1622, 1687, 1709, 1715
HpyF3I CTNAG 8 cut(s) 270, 399, 550, 657, 977, 1522, 1548, 1567
HpySE526I ACGT 1 cut(s) 43
Hsp92I GRCGYC 1 cut(s) 1080
Hsp92II CATG 8 cut(s) 491, 680, 707, 881, 965, 1273, 1318, 1375
HspAI GCGC 2 cut(s) 89, 812
KflI GGGWCCC 1 cut(s) 1439
Ksp22I TGATCA 1 cut(s) 838
Kzo9I GATC 6 cut(s) 626, 838, 1266, 1672, 1812, 1822
LmnI GCTCC 2 cut(s) 1152, 1687
Lsp1109I GCAGC 5 cut(s) 392, 997, 1144, 1458, 1696
LweI GCATC 7 cut(s) 551, 637, 985, 1501, 1553, 1570, 1624
MabI ACCWGGT 2 cut(s) 175, 337
MaeI CTAG 3 cut(s) 432, 744, 1827
MaeII ACGT 1 cut(s) 43
MaeIII GTNAC 4 cut(s) 481, 1240, 1426, 1741
MalI GATC 6 cut(s) 628, 840, 1268, 1674, 1814, 1824
MboI GATC 6 cut(s) 626, 838, 1266, 1672, 1812, 1822
MfeI CAATTG 1 cut(s) 581
MflI RGATCY 1 cut(s) 1822
MhlI GDGCHC 3 cut(s) 425, 637, 1834
MlsI TGGCCA 1 cut(s) 201
MluNI TGGCCA 1 cut(s) 201
MlyI GAGTC 3 cut(s) 296, 756, 1408
MmeI TCCRAC 2 cut(s) 442, 1786
Mox20I TGGCCA 1 cut(s) 201
MroXI GAANNNNTTC 1 cut(s) 1301
MscI TGGCCA 1 cut(s) 201
MslI CAYNNNNRTG 2 cut(s) 492, 927
Msp20I TGGCCA 1 cut(s) 201
MspA1I CMGCKG 2 cut(s) 479, 1703
MspI CCGG 5 cut(s) 24, 275, 546, 1100, 1238
MspR9I CCNGG 6 cut(s) 24, 126, 177, 339, 1023, 1100
MunI CAATTG 1 cut(s) 581
MvaI CCWGG 4 cut(s) 126, 177, 339, 1023
MvnI CGCG 1 cut(s) 83
MwoI GCNNNNNNNGC 6 cut(s) 380, 779, 1622, 1687, 1709, 1715
NciI CCSGG 2 cut(s) 24, 1100
NdeII GATC 6 cut(s) 626, 838, 1266, 1672, 1812, 1822
NlaIII CATG 8 cut(s) 491, 680, 707, 881, 965, 1273, 1318, 1375
NlaIV GGNNCC 4 cut(s) 1019, 1440, 1441, 1824
NmuCI GTSAC 2 cut(s) 1240, 1741
NsbI TGCGCA 2 cut(s) 90, 813
NspI RCATGY 1 cut(s) 881
PaeI GCATGC 1 cut(s) 881
PaeR7I CTCGAG 1 cut(s) 1841
PaqCI CACCTGC 2 cut(s) 256, 1672
PceI AGGCCT 1 cut(s) 351
PdmI GAANNNNTTC 1 cut(s) 1301
PfeI GAWTC 5 cut(s) 17, 412, 1309, 1694, 1784
PkrI GCNGC 5 cut(s) 382, 1012, 1134, 1473, 1711
PleI GAGTC 3 cut(s) 296, 755, 1408
PpsI GAGTC 3 cut(s) 296, 755, 1408
PpuMI RGGWCCY 1 cut(s) 1439
PshBI ATTAAT 1 cut(s) 330
Psp5II RGGWCCY 1 cut(s) 1439
Psp6I CCWGG 4 cut(s) 124, 175, 337, 1021
PspGI CCWGG 4 cut(s) 124, 175, 337, 1021
PspN4I GGNNCC 4 cut(s) 1019, 1440, 1441, 1824
PspPI GGNCC 7 cut(s) 37, 65, 464, 687, 740, 1097, 1439
PspPPI RGGWCCY 1 cut(s) 1439
PstI CTGCAG 2 cut(s) 382, 1015
PstNI CAGNNNCTG 1 cut(s) 377
PsuI RGATCY 1 cut(s) 1822
PvuII CAGCTG 2 cut(s) 479, 1703
RsaI GTAC 4 cut(s) 80, 311, 1349, 1795
RsaNI GTAC 4 cut(s) 79, 310, 1348, 1794
RseI CAYNNNNRTG 2 cut(s) 492, 927
SatI GCNGC 5 cut(s) 381, 1011, 1133, 1472, 1710
Sau3AI GATC 6 cut(s) 626, 838, 1266, 1672, 1812, 1822
Sau96I GGNCC 7 cut(s) 37, 65, 464, 687, 740, 1097, 1439
SchI GAGTC 3 cut(s) 296, 756, 1408
ScrFI CCNGG 6 cut(s) 24, 126, 177, 339, 1023, 1100
SduI GDGCHC 3 cut(s) 425, 637, 1834
SexAI ACCWGGT 2 cut(s) 175, 337
SfaNI GCATC 7 cut(s) 551, 637, 985, 1501, 1553, 1570, 1624
SfcI CTRYAG 4 cut(s) 378, 600, 1011, 1746
Sfr274I CTCGAG 1 cut(s) 1841
SinI GGWCC 5 cut(s) 37, 65, 464, 740, 1439
SlaI CTCGAG 1 cut(s) 1841
SmiMI CAYNNNNRTG 2 cut(s) 492, 927
SmlI CTYRAG 1 cut(s) 1841
SmoI CTYRAG 1 cut(s) 1841
SphI GCATGC 1 cut(s) 881
SseBI AGGCCT 1 cut(s) 351
SsiI CCGC 2 cut(s) 83, 959
SspI AATATT 1 cut(s) 1302
SspMI CTAG 3 cut(s) 432, 744, 1827
StuI AGGCCT 1 cut(s) 351
StyD4I CCNGG 6 cut(s) 22, 124, 175, 337, 1021, 1098
StyI CCWWGG 2 cut(s) 792, 1788
TaaI ACNGT 6 cut(s) 207, 217, 293, 1361, 1747, 1804
TaiI ACGT 1 cut(s) 46
TaqI TCGA 3 cut(s) 410, 1190, 1842
TatI WGTACW 1 cut(s) 1347
TfiI GAWTC 5 cut(s) 17, 412, 1309, 1694, 1784
TscAI CASTG 5 cut(s) 499, 841, 988, 1204, 1750
TseFI GTSAC 2 cut(s) 1240, 1741
TseI GCWGC 5 cut(s) 380, 1010, 1132, 1471, 1709
Tsp45I GTSAC 2 cut(s) 1240, 1741
TspDTI ATGAA 5 cut(s) 111, 138, 1005, 1334, 1368
TspRI CASTG 5 cut(s) 499, 841, 988, 1204, 1750
VneI GTGCAC 1 cut(s) 633
VpaK11BI GGWCC 5 cut(s) 37, 65, 464, 740, 1439
VspI ATTAAT 1 cut(s) 330
XagI CCTNNNNNAGG 1 cut(s) 430
XapI RAATTY 5 cut(s) 232, 367, 884, 1405, 1600
XceI RCATGY 1 cut(s) 881
XhoI CTCGAG 1 cut(s) 1841
XmnI GAANNNNTTC 1 cut(s) 1301
XspI CTAG 3 cut(s) 432, 744, 1827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.